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Anopheles gambiae
cluster # 7829 cluster # 7829       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7829#0 length = 1000 sequences # 3  
consensus_7829#1 length = 897 sequences # 1  
consensus_7829#2 length = 553 sequences # 1  
consensus_7829#3 length = 502 sequences # 2  
consensus_7829#4 length = 441 sequences # 1  

consensusID : consensus_7829#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1000
fasta sequence
                              [GAACCCCGAGTTATCAATTGAAAAATTGTGGCACCNGGAAACGAACACATTAAAAAAACACACACAGAACAGAAAACGGAATGGAAATGGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGCAACACATGCAGAGAGAGAGAAGATAATGAAATGAAACAATTAGCATCACAAAACACAACAACTCTTACTCTTTAAGCGTACTAATGCAAAACAAAAACAACACACACACATTAGAAAGATGATATAAATACTAAGATACCCAAATTTCACAGCGGTAAGCCATTTCTATTCAATAATAAAACATCTAAACAAAACCCAAGGCAAAGGCAACAAAGCTCCCAAATGGCAAAGGCCAGCATAAGCAACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCGCCCCTCAGGGGGTTTGTGT---T-TTTCCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAATGAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTTTGAAGGACAGGAGGATTGTACTTTTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGCGCGAGGGCAGTGGGGAGGTTCCTTCCTAGGCGACTCTATAGACCTTTTTTCCCATTCGGCGTTTGATAGTTGTATCGGCAATCGAAACCGAAGTAGAGCATTTGCGGACATAAAATACAGACACGGGGCGCACAGGGGGGACTGCATTTAGTCATCAGTATCGGTGAAGCCCTAGAAAACAGGGACATAATACGTTACACACACACGCAAACATGTAAACACCGCCCTTGAAATGTCCCTCCTCCGATGATACGCGCGCATTAGCTTCGAGGACTTGCGGCGTACGCGAGACGCACCCCGGAAGTTGGAGAGACGAACGCGAACGGAGTTACACTTGTCACCGCCATGAATGTAATACTGTCGTCAATAGGCAAAATAAATGCATAACTACATTGAGCTTT]

[+] EMBL AL692669             [GAACCCCGAGTTATCAATTGAAAAATTGTGGCACCNGGAAACGAACACATTAAAAAAACACACACAGAACAGAAAACGGAATGGAAATGGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGCAACACATGCAGAGAGAGAGAAGATAATGAAATGAAACAATTAGCATCACAAAACACAACAACTCTTACTCTTTAAGCGTACTAATGCAAAACAAAAACAACACACACACATTAGAAAGATGATATAAATACTAAGATACCCAAATTTCACAGCGGTAAGCCATTTCTATTCAATAATAAAACATCTAAACAAAACCCAAGGCAAAGGCAACAAAGCTCCCAAATGGCAAAGGCCAGCATAAGCAACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCG CCCTCAGGGGGTTTGTGTANNTATTACCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAATGAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTATGAAGGACAGGAGGATTGTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX616949             [                                                                                                                                                                                                                                                                                                                                                                          AAGGCCAGCATAAGCAACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCGCCCCTCAGGGGGTTTGTGT   T TTTCCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAATGAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTTTGAAGGACAGGAGGATTGTACTTTTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGCGCGAGGGCAGTGGGGAGGTTCCTTCCTAGGCGACTCTATAGACCTTTTTTCCCATTCGGCGTTTGATAGTTGTATCGGCAATCGAAACCGAAGTAGAGCATTTGCGGACATAAAATACAGACACGGGGCGCACAGGGGGGACTGCATTTAGTCATCAGTATCGGTGAAGCCCTAGAAAACAGGGACATAATACGTTACACACACACGCAAACATGTAAACACCGCCCTTGAAATGTCCCTCCTCCGATGATACGCGCGCATTAGCTTCGAGGACTTGCGGCGTACGCGAGACGCACCCCGGAAGTTGGAGAGACGAACGCGAACGGAGTTACACTTGTCACCGCCATGAATGTAATACTGTCGTCAATAGGCAAAATAAATGCATAACTACATTGAGCTTT]
[+] EMBL BX614467             [                                                                                                                                                                                                                                                                                                                                                                                              AATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCGCCCCTCAGGGGGTTTGTGT   T TTTCCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAATGAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTTTGAAGGACAGGAGGATTGTACTTTTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGCGCGAGGGCAGTGGGGAGGTTCCTTCCT                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_7829#0 GAACCCCGAGTTATCAATTGAAAAATTGTGGCACCNGGAAACGAACACATTAAAAAAACA CACACAGAACAGAAAACGGAATGGAAATGGAAAAGCAAAAATAAAATAAGTCACAAAAAA ACTTCAAATACAGCAACACATGCAGAGAGAGAGAAGATAATGAAATGAAACAATTAGCAT CACAAAACACAACAACTCTTACTCTTTAAGCGTACTAATGCAAAACAAAAACAACACACA CACATTAGAAAGATGATATAAATACTAAGATACCCAAATTTCACAGCGGTAAGCCATTTC TATTCAATAATAAAACATCTAAACAAAACCCAAGGCAAAGGCAACAAAGCTCCCAAATGG CAAAGGCCAGCATAAGCAACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTT CTCGATCACTCTTTCCCGCCCCTCAGGGGGTTTGTGTTTTTCCGGTTTTCGGTTACATTG CCTAAAACGCTTCGGAATGAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTTTGAAG GACAGGAGGATTGTACTTTTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGCG CGAGGGCAGTGGGGAGGTTCCTTCCTAGGCGACTCTATAGACCTTTTTTCCCATTCGGCG TTTGATAGTTGTATCGGCAATCGAAACCGAAGTAGAGCATTTGCGGACATAAAATACAGA CACGGGGCGCACAGGGGGGACTGCATTTAGTCATCAGTATCGGTGAAGCCCTAGAAAACA GGGACATAATACGTTACACACACACGCAAACATGTAAACACCGCCCTTGAAATGTCCCTC CTCCGATGATACGCGCGCATTAGCTTCGAGGACTTGCGGCGTACGCGAGACGCACCCCGG AAGTTGGAGAGACGAACGCGAACGGAGTTACACTTGTCACCGCCATGAATGTAATACTGT CGTCAATAGGCAAAATAAATGCATAACTACATTGAGCTTT



consensusID : consensus_7829#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 897
fasta sequence
                              [CGNGGTNAAAAAACAGTTACAAAAACAAAACCACGCACTAGAGCNGCTCCTCTAAATAGAACGTAATGTGTAGAATNTCTAGTAATTATATACACGCGACACAGGGCCAGAAAGAAGGTAGCCATCAATTGAAAAATATGTAGGCACAAGGAAACGAACACATATAAAAAAACACACACAGAACAGCANAACGGAATGGCAAATGGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGCAACACATGCAGAGAGAGAGAAGATAATGACNATGAACACAATTAGCATCACAAAAGCACAACAACTCTTACTACTATCTAAGCGTACTAATGCAAAACAAAAACAAAAACACACACATTAGAACAGATGATATAAATACTAAGGATACCCAAATNTNCACAGCGGTAAGCCACNNTCCTATTCAACCAACTAANACATCTAACACCAAAACCCAAGGCCAACAGGCAACAAAGCTACGCCAAATAGGGCANAAGGCCAGCATAAGCCAACTNAACTNCAACAGTAACAGCGCCTCGCAACAATAGGTNCGTCAAAATAACTACGATACACTCCTATAACCCGCGCCCTACAGCGGGGTAACAGAGTANCCAACCGGGAACCAGCCGGANCACAAAGCCCTAAAACCGCCNNCCGGACCAAACTAGGAACACCGACAGCGGACAGCCACCCCCAACGGAGAAANGCCATGATAGNAGAACACCCCCGCNACGGNNGGGAACCAGNCAGGGCACNATCGGACACNCACGAGGNNCAGAACTACGGGGGCCCGCCACACACNCAAGGCAGCAGGNCAACATGAGGGCGGCGCAAGGGGCNAGGGGAGAGGAACCGTNCCCAGGCGGCACACGACAAGCAACNCCNCNGAG]

[+] EMBL AL695434             [CGNGGTNAAAAAACAGTTACAAAAACAAAACCACGCACTAGAGCNGCTCCTCTAAATAGAACGTAATGTGTAGAATNTCTAGTAATTATATACACGCGACACAGGGCCAGAAAGAAGGTAGCCATCAATTGAAAAATATGTAGGCACAAGGAAACGAACACATATAAAAAAACACACACAGAACAGCANAACGGAATGGCAAATGGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGCAACACATGCAGAGAGAGAGAAGATAATGACNATGAACACAATTAGCATCACAAAAGCACAACAACTCTTACTACTATCTAAGCGTACTAATGCAAAACAAAAACAAAAACACACACATTAGAACAGATGATATAAATACTAAGGATACCCAAATNTNCACAGCGGTAAGCCACNNTCCTATTCAACCAACTAANACATCTAACACCAAAACCCAAGGCCAACAGGCAACAAAGCTACGCCAAATAGGGCANAAGGCCAGCATAAGCCAACTNAACTNCAACAGTAACAGCGCCTCGCAACAATAGGTNCGTCAAAATAACTACGATACACTCCTATAACCCGCGCCCTACAGCGGGGTAACAGAGTANCCAACCGGGAACCAGCCGGANCACAAAGCCCTAAAACCGCCNNCCGGACCAAACTAGGAACACCGACAGCGGACAGCCACCCCCAACGGAGAAANGCCATGATAGNAGAACACCCCCGCNACGGNNGGGAACCAGNCAGGGCACNATCGGACACNCACGAGGNNCAGAACTACGGGGGCCCGCCACACACNCAAGGCAGCAGGNCAACATGAGGGCGGCGCAAGGGGCNAGGGGAGAGGAACCGTNCCCAGGCGGCACACGACAAGCAACNCCNCNGAG]


>consensus_7829#1 CGNGGTNAAAAAACAGTTACAAAAACAAAACCACGCACTAGAGCNGCTCCTCTAAATAGA ACGTAATGTGTAGAATNTCTAGTAATTATATACACGCGACACAGGGCCAGAAAGAAGGTA GCCATCAATTGAAAAATATGTAGGCACAAGGAAACGAACACATATAAAAAAACACACACA GAACAGCANAACGGAATGGCAAATGGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTT CAAATACAGCAACACATGCAGAGAGAGAGAAGATAATGACNATGAACACAATTAGCATCA CAAAAGCACAACAACTCTTACTACTATCTAAGCGTACTAATGCAAAACAAAAACAAAAAC ACACACATTAGAACAGATGATATAAATACTAAGGATACCCAAATNTNCACAGCGGTAAGC CACNNTCCTATTCAACCAACTAANACATCTAACACCAAAACCCAAGGCCAACAGGCAACA AAGCTACGCCAAATAGGGCANAAGGCCAGCATAAGCCAACTNAACTNCAACAGTAACAGC GCCTCGCAACAATAGGTNCGTCAAAATAACTACGATACACTCCTATAACCCGCGCCCTAC AGCGGGGTAACAGAGTANCCAACCGGGAACCAGCCGGANCACAAAGCCCTAAAACCGCCN NCCGGACCAAACTAGGAACACCGACAGCGGACAGCCACCCCCAACGGAGAAANGCCATGA TAGNAGAACACCCCCGCNACGGNNGGGAACCAGNCAGGGCACNATCGGACACNCACGAGG NNCAGAACTACGGGGGCCCGCCACACACNCAAGGCAGCAGGNCAACATGAGGGCGGCGCA AGGGGCNAGGGGAGAGGAACCGTNCCCAGGCGGCACACGACAAGCAACNCCNCNGAG



consensusID : consensus_7829#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 553
fasta sequence
                              [AAACAAAAACCAAAAAGGCAAAGGAACAAAGCTCCCAAATGGCAAAGGCCAGCATAAGCAACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCGCCCCTCAGGGGGTTTGTGTTTTTCCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAATGAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTTTGAAGGACAGGAGGATTGTACTTTTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGCGCGAGGGCAGTGGGGAAGGTTCCTTCCTAGGCGACTCTATAGACCTTTTTTCCCATTCGGCGTTTGATAGTTGTATCGGCAATCGAAACCGAAGTAGAGCAAAAAACGAGGAAATTAAATTAAATTATTTTGCAAAGAAAAAAACAACACACAAAATAGGGTTTTGTGACTCGAACGACGGGAACGAAAACACATGAATCAAAGATTACTTTATGAACGTAAAACAGAAACAAAAAAACACACACTTTAAACATACATCACGAAACCACACA]

[+] EMBL BX614829             [AAACAAAAACCAAAAAGGCAAAGGAACAAAGCTCCCAAATGGCAAAGGCCAGCATAAGCAACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCGCCCCTCAGGGGGTTTGTGTTTTTCCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAATGAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTTTGAAGGACAGGAGGATTGTACTTTTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGCGCGAGGGCAGTGGGGAAGGTTCCTTCCTAGGCGACTCTATAGACCTTTTTTCCCATTCGGCGTTTGATAGTTGTATCGGCAATCGAAACCGAAGTAGAGCAAAAAACGAGGAAATTAAATTAAATTATTTTGCAAAGAAAAAAACAACACACAAAATAGGGTTTTGTGACTCGAACGACGGGAACGAAAACACATGAATCAAAGATTACTTTATGAACGTAAAACAGAAACAAAAAAACACACACTTTAAACATACATCACGAAACCACACA]


>consensus_7829#2 AAACAAAAACCAAAAAGGCAAAGGAACAAAGCTCCCAAATGGCAAAGGCCAGCATAAGCA ACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCG CCCCTCAGGGGGTTTGTGTTTTTCCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAAT GAGCGAGCGAGCCCCACGGAAGCTGTGTGAACCCGTTTGAAGGACAGGAGGATTGTACTT TTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGCGCGAGGGCAGTGGGGAAGG TTCCTTCCTAGGCGACTCTATAGACCTTTTTTCCCATTCGGCGTTTGATAGTTGTATCGG CAATCGAAACCGAAGTAGAGCAAAAAACGAGGAAATTAAATTAAATTATTTTGCAAAGAA AAAAACAACACACAAAATAGGGTTTTGTGACTCGAACGACGGGAACGAAAACACATGAAT CAAAGATTACTTTATGAACGTAAAACAGAAACAAAAAAACACACACTTTAAACATACATC ACGAAACCACACA



consensusID : consensus_7829#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 502
fasta sequence
                              [AAGAAAAAAAAACAGTAACTTAGAAATCAATCCTACTGAAGAACATACACAGATGCAGAATACAAAAAAAAACAGTTACAAAAACAAAACCACGCAACTAGAGCGGCTCCTCTAAATGAACGTAATGTGTGAATTTCTAGTAATTATATCATGCGACACAGGGCCAGAAAGAAGTTAGCCATCAATTGAAAAATTGTGGCTAAAGGAAACAAACACATT--AAAAAGACACACAGAACAGAAAACGGAATGAAAATAGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGCAACACATAGAGAGAGAGAGAGAGAAGATAATGAAATGAAACAATTAGCATCACAAAACACAGCAACTCTTACTCTTTAAGCGTACTAATGC------AAAACAAAAACACACACATTAGAAAGATGATATAAATACTAAGATACCCAAATTTCACAGCGGTAAGCCATTTCTATTCAATAATAAAACATCTAAACAAAACCCAAGGCA]

[+] EMBL BX611060             [AAGAAAAAAAAACAGTAACTTAGAAATCAATCCTACTGAAGAACATACACAGATGCAGAATACAAAAAAAAACAGTTACAAAAACAAAACCACGCAACTAGAGCGGCTCCTCTAAATGAACGTAATGTGTGAATTTCTAGTAATTATATCATGCGACACAGGGCCAGAAAGAAGTTAGCCATCAATTGAAAAATTGTGGCTAAAGGAAACAAACACATT  AAAAAGACACACAGAACAGAAAACGGAATGAAAATAGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGCAACACATAGAGAGAGAGAGAGAGAAGATAATGAAATGAAACAATTAGCATCACAAAACACAGCAACTCTTACTCTTTAAGCGTACTAATGC      AAAACAAAAACACACACATTAGAAAGATGATATAAATACTAAGATACCCAAATTTCACAGCGGTAAGCCATTTCTATTCAATAATAAA                       ]
[+] EMBL AL930525             [                                                                   aattACAGTTAC AAAACAAA  CACGCAACTAGAGCGGCTCCTCTAAATGAACGTAATGTGTGAATTTCTAGTAATTATATCACGCGACACAGGGCCAGAAAGAAGGTAGCCATCAATTGAAAAATTGTGGCACAAGGAAACGAACACATTAAAAAAACACACACAGAACAGAAAACGGAATGGAAATGGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGCAACACAT   G CAGAGAGAGAGAAGATAATGAAATGAAACAATTAGCATCACAAAACACAACAACTCTTACTCTTTAAGCGTACTAATGCAAAACAAAAACAAAAACACACACATTAGAAAGATGATATAAATACTAAGATACCCAAATTTCACAGCGGTAAGCCATTTCTATTCAATAATAAAACATCTAAACAAAACCCAAGGCA]


>consensus_7829#3 AAGAAAAAAAAACAGTAACTTAGAAATCAATCCTACTGAAGAACATACACAGATGCAGAA TACAAAAAAAAACAGTTACAAAAACAAAACCACGCAACTAGAGCGGCTCCTCTAAATGAA CGTAATGTGTGAATTTCTAGTAATTATATCATGCGACACAGGGCCAGAAAGAAGTTAGCC ATCAATTGAAAAATTGTGGCTAAAGGAAACAAACACATTAAAAAGACACACAGAACAGAA AACGGAATGAAAATAGAAAAGCAAAAATAAAATAAGTCACAAAAAAACTTCAAATACAGC AACACATAGAGAGAGAGAGAGAGAAGATAATGAAATGAAACAATTAGCATCACAAAACAC AGCAACTCTTACTCTTTAAGCGTACTAATGCAAAACAAAAACACACACATTAGAAAGATG ATATAAATACTAAGATACCCAAATTTCACAGCGGTAAGCCATTTCTATTCAATAATAAAA CATCTAAACAAAACCCAAGGCA



consensusID : consensus_7829#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence
                              [AGATTCACGGTTATTAAGGGCATCGCATGAATGCTGCAATGTATGTTACATGGTGTTCCGGTCCGTAGGTTCGGTGCTTGTGTTAAGAATATATCCTTTTGCCACGTCTGCGTAAAGCAATCTTTCGAAAATGAGTTCATCAAACCTGGTTGACTTGCGCGAGAGAAGGCATTTTTTGCATATTTTTGCAAATCATATTTTGTTTGAACCAAAATTATATTCCTCTTGCAAGAGGAGCAAAAAACGAGGAAATTAAATTAAATTATTTTGCAAAGAAAAAAACAACACACAAAATAGGGTTTTGTGACTCGAACGACGGGAACGAAAACACATGAATCAAAGATTACTTTATGAACGTAAAACAGAAACAAAAAAACACACACTTTAAACATACATCACGAAACACACAACATAATAGGATAAAAAAGTAAAAAGTATAAC]

[+] EMBL BX612824             [AGATTCACGGTTATTAAGGGCATCGCATGAATGCTGCAATGTATGTTACATGGTGTTCCGGTCCGTAGGTTCGGTGCTTGTGTTAAGAATATATCCTTTTGCCACGTCTGCGTAAAGCAATCTTTCGAAAATGAGTTCATCAAACCTGGTTGACTTGCGCGAGAGAAGGCATTTTTTGCATATTTTTGCAAATCATATTTTGTTTGAACCAAAATTATATTCCTCTTGCAAGAGGAGCAAAAAACGAGGAAATTAAATTAAATTATTTTGCAAAGAAAAAAACAACACACAAAATAGGGTTTTGTGACTCGAACGACGGGAACGAAAACACATGAATCAAAGATTACTTTATGAACGTAAAACAGAAACAAAAAAACACACACTTTAAACATACATCACGAAACACACAACATAATAGGATAAAAAAGTAAAAAGTATAAC]


>consensus_7829#4 AGATTCACGGTTATTAAGGGCATCGCATGAATGCTGCAATGTATGTTACATGGTGTTCCG GTCCGTAGGTTCGGTGCTTGTGTTAAGAATATATCCTTTTGCCACGTCTGCGTAAAGCAA TCTTTCGAAAATGAGTTCATCAAACCTGGTTGACTTGCGCGAGAGAAGGCATTTTTTGCA TATTTTTGCAAATCATATTTTGTTTGAACCAAAATTATATTCCTCTTGCAAGAGGAGCAA AAAACGAGGAAATTAAATTAAATTATTTTGCAAAGAAAAAAACAACACACAAAATAGGGT TTTGTGACTCGAACGACGGGAACGAAAACACATGAATCAAAGATTACTTTATGAACGTAA AACAGAAACAAAAAAACACACACTTTAAACATACATCACGAAACACACAACATAATAGGA TAAAAAAGTAAAAAGTATAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7829#2      AAACAAAAACCAAAAAGGCAAAGGAACAAAGCTCCCAAATGGCAAAGGCCAGCATAAGCA 60
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      ------------------------------------------------------------
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      ------------------------------------------------------------
                                                                                  

consensus_7829#2      ACTAAATTAATAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCG 120
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      ------------------------------------------------------------
consensus_7829#3      ------AAGAAAAAAAAACAGTAACTTAGAAATCAATCCTACTGAAGAACATACACAGAT 54
consensus_7829#0      ------------------------------------------------------------
                                                                                  

consensus_7829#2      CCCCTCAGGGGGTTTGTGTTTTTCCGGTTTTCGGTT-ACATTGCCTAAAACGCTTCGGAA 179
consensus_7829#4      -----------------AGATTCACGGTTATTAAGG-GCATCGCATGAA-TGCTGCAATG 41
consensus_7829#1      -CGNGGTN----AAAAAACAGTTACAAAAACAAAACCACGCA-CTAGAGCNGCTCCTCTA 54
consensus_7829#3      GCAGAATACAAAAAAAAACAGTTACAAAAACAAAACCACGCAACTAGAGCGGCTCCTCTA 114
consensus_7829#0      ------------------------------------------------------------
                                                                                  

consensus_7829#2      TGAGCGAGCGAGCCCCACG---G-----AAGCTGTGTGAACCCGTTTGAAGGACAGGAGG 231
consensus_7829#4      TATGTTACATGGTGTTCCG---GTCCGTAGGTTCGGTGCTTGTGTTAAGAATATATCCTT 98
consensus_7829#1      AATAGAACGTAATGTGTAGAATNTCTAGTAATTATATACACGCGACACAGGGCCAGAAAG 114
consensus_7829#3      AAT-GAACGTAATGTGT-GAATTTCTAGTAATTATAT-CATGCGACACAGGGCCAGAAAG 171
consensus_7829#0      ---------------------------------------------------------GAA 3
                                                                                  

consensus_7829#2      ATTGTACTTTTAGTCAGATCGGGCCGTTTTAAGAGAGAGATAATGAGGGC-GCGAGGGCA 290
consensus_7829#4      TTGCCACGTCTGCGTAAAGCAATC--TTTCGAAAATGAGTTCATCAAACC-TGGTTGACT 155
consensus_7829#1      AAGGTAGCCATCAATTGAAAAATATGTAGGCACAAGGAAACGAACACATATAAAAAAACA 174
consensus_7829#3      AAGTTAGCCATCAATTGAAAAAT-TGT-GGCTAAAGGAAACAAACACATT---AAAAAGA 226
consensus_7829#0      CCCCGAGTTATCAATTGAAAAAT-TGT-GGCACCNGGAAACGAACACATT-AAAAAAACA 60
                           *    *      *        *         **    *  *              

consensus_7829#2      ---GTGGGGAAGGTTCCTTCCTAGGCGACTCTATAGACCTTTTTTCCCATTCGGCGTTTG 347
consensus_7829#4      TGCGCGAGAGAAGGCATTTTTTGCATATTTTTGCAAATCATATTTT---------GTTTG 206
consensus_7829#1      CACACAGAACAGCANAACGGAATGGCAAATG-GAAAAGCAAAAATAAAATAAGTCACAAA 233
consensus_7829#3      CACACAGAACAG-AAAACGGAATGA-AAATA-GAAAAGCAAAAATAAAATAAGTCACAAA 283
consensus_7829#0      CACACAGAACAG-AAAACGGAATGG-AAATG-GAAAAGCAAAAATAAAATAAGTCACAAA 117
                                *                  *    * * *     *               

consensus_7829#2      ATAGTTGTATCGGCAATC-GAAACCGAAGTAGAGCAA---AAAACGAGGAAATTAAATTA 403
consensus_7829#4      A--ACCAAAATTATATTC-CTCTTGCAAGAGGAGCAA---AAAACGAGGAAATTAAATTA 260
consensus_7829#1      AAAACTTCAAATACAGCAACACATGCAGAGAGAGAGA----AGATAATGACNATGAACAC 289
consensus_7829#3      AAAACTTCAAATACAGCAACACATAGAGAGAGAGAGAGAGAAGATAATGA-AATGAA-AC 341
consensus_7829#0      AAAACTTCAAATACAGCAACACATGCAGAGAGAGAGA----AGATAATGA-AATGAA-AC 171
                      *       *     *           *    ***  *    * *  * **   * **   

consensus_7829#2      AATTATTTTGCAAAGAAAAAAACAACACACAAAATA----GGGTTTTGTGACTCGAACGA 459
consensus_7829#4      AATTATTTTGCAAAGAAAAAAACAACACACAAAATA----GGGTTTTGTGACTCGAACGA 316
consensus_7829#1      AATTAGCATCACAAAAGCACAACAACTCTTACTACTATCTAAGCGTACTAATGCAAA--A 347
consensus_7829#3      AATTAGCATCACAAAA-CACAGCAACTCTTACTCTT---TAAGCGTACTAATGCAAA--A 395
consensus_7829#0      AATTAGCATCACAAAA-CACAACAACTCTTACTCTT---TAAGCGTACTAATGCAAA--A 225
                      *****   *   ** *  * * **** *  *           *  *  * *  * **  *

consensus_7829#2      CGGGAACGAAAACACATGAATCAAAGATTACTTTATGAACGTAAAACAGAAACAAAAAAA 519
consensus_7829#4      CGGGAACGAAAACACATGAATCAAAGATTACTTTATGAACGTAAAACAGAAACAAAAAAA 376
consensus_7829#1      CAAAAACAAAAACACACACATTAGAACAGATGATATAAATACTAAGGATACCCAAATNTN 407
consensus_7829#3      CAAA------AACACACACATTAGAA-AGATGATATAAATACTAAG-ATACCCAAATTTC 447
consensus_7829#0      CAAAAACAA-CACACACACATTAGAA-AGATGATATAAATACTAAG-ATACCCAAATTTC 282
                      *          *****   ** * *    *   *** **    **  * *  ****    

consensus_7829#2      CACACACTTTAAACATACATC-ACGAAACCACACA------------------------- 553
consensus_7829#4      CACACACTTTAAACATACATC-ACGAAAC-ACACAACATAATAGGATAAAAAAGTAAAAA 434
consensus_7829#1      CACAGCGGTAAGCCACNNTCCTATTCAACCAACTAANACATCTAACACCAAAACCCAAGG 467
consensus_7829#3      -ACAGCGGTAAGCC--ATTTCTATTCAATAA--TAAAACATCTAAA--CAAAACCCAAGG 500
consensus_7829#0      -ACAGCGGTAAGCC--ATTTCTATTCAATAA--TAAAACATCTAAA--CAAAACCCAAGG 335
                       ***    * *  *      * *   **  *   *                         

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      GTATAAC----------------------------------------------------- 441
consensus_7829#1      CCAACAGGCAACAAAGCTACGCCAAATAGGGCANAAGGCCAGCATAAGCCAACTNAACTN 527
consensus_7829#3      CA---------------------------------------------------------- 502
consensus_7829#0      CAA--AGGCAACAAAGCTCC--CAAATGGC---AAAGGCCAGCATAAGCAACTAAATTAA 388
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      CAACAGTAACAGCGCCTCGCAACAATAGGTNCGTCAAA-ATAACTACGATACACTCCTAT 586
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      TAGTTTAGCGCTCGAAAATGGTTCGTAAATTTCTCGATCACTCTTTCCCGCCCCTCAGGG 448
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      AACCCGCGCCCTACAGCGGGGTAACAGAGTANCCAACCGGGAACCAGCCGGANC-ACAAA 645
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      GGTTTGTGTTTTTCCGGTTTTCGGTTACATTGCCTAAAACGCTTCGGAATGAGCGAGCGA 508
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      GCCCTAAAACCGCCNNCCGGACCAAACT-AGGAACACCGACAGCGGACAGCCACCCCCAA 704
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      GCCCCACGGAAGCTGTGTGAACCCGTTTGAAGGACAGGAGGATTGTACTTTTAGTCAGAT 568
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      CGGAGAAANGCCATGATAGNAGAACACCCCCGCNACGGNNGGGAACCAGNCAGGGCACNA 764
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      CGGGCCGTTTTAAGAGAGAGATAATGAGGGCGCGAGGGCAGTGGGGAGGTTCCTTCCTAG 628
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      TCGGACACNCACGAGGNNCAGAACTACGGGGGCCCGCCACACACNCAAGGCAGCAGGNCA 824
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      GCGACTCTATAGACCTTTTTTCCCATTCGGCGTTTGATAGTTGTATCGGCAATCGAAACC 688
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      ACATGAGGGCGGCGCAAGGGGCNAGGGGAGAGGAACCGTNCCCAGGCGGCACACGACAAG 884
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      GAAGTAGAGCA-TTTGCGGACATAAAATACAGACACGGGGCGCACAGGGGGGACTGCATT 747
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      CAACNCCNCNGAG----------------------------------------------- 897
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      TAGTCATCAGTATCGGTGAAGCCCTAGAAAACAGGGACATAATACGTTACACACACACGC 807
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      ------------------------------------------------------------
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      AAACATGTAAACACCGCCCTTGAAATGTCCCTCCTCCGATGATACGCGCGCATTAGCTTC 867
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      ------------------------------------------------------------
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      GAGGACTTGCGGCGTACGCGAGACGCACCCCGGAAGTTGGAGAGACGAACGCGAACGGAG 927
                                                                                  

consensus_7829#2      ------------------------------------------------------------
consensus_7829#4      ------------------------------------------------------------
consensus_7829#1      ------------------------------------------------------------
consensus_7829#3      ------------------------------------------------------------
consensus_7829#0      TTACACTTGTCACCGCCATGAATGTAATACTGTCGTCAATAGGCAAAATAAATGCATAAC 987
                                                                                  

consensus_7829#2      -------------
consensus_7829#4      -------------
consensus_7829#1      -------------
consensus_7829#3      -------------
consensus_7829#0      TACATTGAGCTTT 1000
                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)