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Anopheles gambiae
cluster # 7831 cluster # 7831       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7831#0 length = 1087 sequences # 7  
consensus_7831#1 length = 365 sequences # 1  

consensusID : consensus_7831#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1087
fasta sequence
                              [ACCCACGCGTCCGCGGACGCGTGGCGCAACACGATGGAGAGCACGAAATCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATAGGCGGAATGCGTATGGCGTTGGAGCAAGCTGGGAAAG-AGTTTGAAATCGTCTCCGCCATCGACGTGAATCCCATCGCAAACGAAGTTTACAAGCACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGGCGGAGAAAGTAACCAAACTAAAGGTCGATACGAT-CCTGATGTCGCCGCCCTGTCAGCCCTTCACGAGGAACGGA-AAGTTTAACGATATCAACGATCGAAGGAG-CGACCCATTTCTGCACATTTGCG-AGCTGCTGGA-TAAGATGCCGCTGGTAAAGTTCATAC-TGATGGAAAACGTGAAAGGGTTTGAAAA-CTCACAAGCC-TGTGAGATGTACAA-GGCGCG-CCTGC-GGG-AGG-CAGGTTTCCAC-TACCAGCAGTA-CA-TACTATCGCCGCACCAGTTTGGCGTGCCCAAC-ACTCGCCACCGGTACTACTGTATCGC-AAAACG-CCATGGAGCGGATTTTAAATGGA-AGAGTGAAGAT-ATTATTACCAC-ACCGCAATCAGG-CTGCGGTGC-AAAG---CAAACG---TTGGTTGGAA-CGAT-TGTGG-ACAC-GCAGCAAGACGCATTGGAACAGTATGGGTTGAAAAGTGC-TACATTACTAAA-GCATCTTCCACTGATGGACGTATGCACGCCGGAATCCACCAACTCGATGTGC-TTTACGAAAGCGTACACGCATTACGCGGAAGGTACGGGTTCGGTGTACTGTCCACTTTCTAGGCAGGAATTCGACAGGACCTATGCCCTTGCGATGGGTGCCGAGGAGGACGAGGATCGAAAGCTTTCTGTGCTGCGGGAACTGCGCGTGCGATACTTTACCCCGAAAGAAGTGGCGCGATTTATGAGCTTTCCAGAGCATTTTAGCTTCCCAGATACGGTTACGAACAAGCAACGTTATCGTGTGCTGGGTAATAGCATAAACGTGTTTGTCGTCAGTGTGCTACTACACGAGCTGTAAATAAATACGTTGAATTTTGTGCAGTTAAAAAAAA]

[+] EMBL BM606519             [ACCCACGCGTCCGCGGACGCGTGGGGCAACACGATGGAGAGCACGAAATCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATAGGCGGAATGCGTATGGCGTTGGAGCAAGCTGGGAAAG AGTTTGAAATCGTCTCCGCCATCGACGTGAATCCCATCGCAAACGAAGTTTACAAGCACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGGCGGAGAAAGTAACCAAACTAAAGGTCGATACGAT CCTGATGTCGCCGCCCTGTCAGCCCTTCACGAGGAACGGA AAGTTTAACGATATCAACGATCGAAGGAG CGACCCATTTCTGCACATTTGCG AGCTGCTGGA TAAGATGCCGCTGGTAAAGTTCATAC TGATGGAAAACGTGAAAGGGTTTGAAAA CTCACAAGCC TGTGAGATGTACAA GGCGCG CCTGC GGG AGG CAGGTTTCCAC TACCAGCAGTA CA TACTATCGCCGCACCAGTTTGGCGTGCCCAAC ACTCGCCACCGGTACTACTGTATCGC AAAACG CCATGGAGCGGATTTTAAATGGA AGAGTGAAGAT ATTATTACCAC ACCGCAATCAGG CTGCGGTGC AAAG   CAAACG   TTGGTTGGAA CGAT TGTGG ACAC GCAGCAAGACGCATTGGAACAGTATGGGTTGAAAAGTGC TACATTACTAAA GCA                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08MES             [                   caaaaCGCAACACGATGGAGAGCACGAAATCTGAACCGCACAGAGTGTTGGAACTTTTCAGTGGTATTGGCGGAATGCGAATGGCATTGGAGCGTGCTGGGAAAGCAGTTTGAAATCGTCTCCGCCATCGACGTGAACCCAATCGCAAACGAAGTTTACAAACACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGGCGGAGAAAGTAACCAAACTAAAGGTCGATACGAT CCTGATGTCGCCGCCCTGTCAGCCCTTCACGAGGAACGGA AAGTTTAACGATATCAACGATCGAAGGAG CGACCCATTTCTGCACATTTGCG AGCTGCTGGA TAAGATGCCGCTGGTAAAGTTCATAC TGATGGAAAACGAAAAAGGGTTTGAAAA CTCACAAGCC TGTGAGATGTACAA GGCGCG CCTGCGGGG AGG CAGGTTTCCAC TACCAGCAGTA CA TACTATCGCCGCACCAGTTTGGCGTGCCCAAC ACTCGCCACCGGTACTACTGTATCGC AAAACG CCATGGAGCGGATTTTAAATGGA AGAGTGAAGAA ATTATTACCAC ACCGCAAGCAGG CTGCGGTGC AAAA   CAAACG   TTGGTTGGAA CGAT TGTGG ACAC GCAGCAAGACGCATTGGAACAGTATGGGTTGAAAAGTGC TACATTATTAAA GCATCTTCCACTGATGGACGTATGCACGCCGGAATCCACCAACTCGATGTGC TTTACGAAAGCGTACACGCATTACGCGGAAGGTACGGGTTCGGTGTACTGTCCACTTTCTAGGCAGGAATTCGACAGGACCTATGCCCTTGCGATGGGTGCCGAGGAGGACGAGGATCGAAAGCTTTCTGTGCTGCGGGAACTGCGCGTGCGATACTTTACCCCGAAAGAAGTGGCGCGATTTATGAGCTTTCCAGAGCATTTTAGCTTCCCAGATACGGTTACGAACAAGCAACGTTATCGTGTGCTGGGTAAT                                                                               ]
[+] EMBL BX625706             [                        CGCAACACGATGGAGAGCACGAAATCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATAGGCGGAATGCGTATGGCGTTGGAGCAAGCTGGGAAAG AGTTTGAAATCGTCTCCGCCATCGACGTGAATCCCATCGCAAACGAAGTTTACAAGCACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGGCGGAGAAAGTAACCAAACTAAAGGTCGATACGAT CCTGATGTCGCCGCCCTGTCAGCCCTTCACGAGGAACGGA AAGTTTAACGATATCAACGATCGAAGGAG CGACCCATTTCTGCACATTTGCG AGCTGCTGGA TAAGATGCCGCTGGTAAAGTTCATAC TGATGGAAAACGTGAAAGGGTTTGAAAA CTCACAAGCC TGTGAGATGTACAA GGCGCG CCTGC GGG AGG CAGGTTTCCAC TACCAGCAGTA CA TACTATCGCCGCACCAGTTTGGCGTGCCCAAC ACTCGCCACCGGTACTACTGTATCGC AAAACG CCATGGAGCGGATTTTAAATGGA AGAGTGAAGAT ATTATTACCAC ACCGCAATCAGG CTGCGGTGC AAAG   CAAACG   TTGGTTGGAA CGAT TGTGG ACAC GCAGCAAGACGCATTGGAACAGTATGGGTTGAAAAGTGC TACATTACTAAA GCATCTTCCACTGATGGATGTATGCACGGCGGAATCCACCAACTCGATGTGCTTTTACGAAAGCGTACACGCA                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09OK7             [                               CGATGGAGAGCACGAAATCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATAGGCGGAATGCGTATGGCGTTGGAGCAAGCTGGGAAAG AGTTTGAAATCGTCTCCGCCATCGACGTGAATCCCATCGCAAACGAAGTTTACAAGCACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGGCGGAGAAAGTAACCAAACTAAAGGTCGATACGAT CCTGATGTCGCCGCCCTGTCAGCCCTTCACGAGGAACGGA AAGTTTAACGATATCAACGATCGAAGGAG CGACCCATTTCTGCACATTTGCGTAGCTGCTGGA TAAGATGCCGCTGGTAAAGTTCATAC TGATGGAAAACGTGAAAGGGTTTGAAAA CTCACAAGCCGTGTGAGATGTACAA GGCGCG CCTGC GGG AGG CAGGTTTCCAC TACCAGCAGTA CA TACTATCGCCGCACCAGTTTGGCGTGCCCAAC ACTCGCCACCGGTACTACTGTATCGC AAAACG CCATGGAGCGGATTTTAAATGGA AGAGTGAAGAT ATTATTACCAC ACCGCAATCAGG CTGCGGTGC AAAG   CAAACG   TTGGTTGGAA CGAT TGTGG ACAC GCAGCAAGACGCATTGGAACAGTATGGGTTGAAAAGTGC TACATTACTAAA GCATCTTCCACTGATGGATGTATGCACGGCGGAATCCACCAACTCGGTGTGC TTTACGAAAGCGTACACGCATTACGCGGAAGGTACGGGTTCGGTGTACTGTCCACTTTCTAGGCAGGAATTCGACAAGACCTATGCCCTTGCGATGGGTGCCGAGGAGGACGAGGATCGAAAGCTTGCTGTGCTGCGGGAACTGCGCGTGCGATACTTTAC                                                                                                                                                                             ]
[+] EMBL AL695623             [                        cccgaggttATGGAGAGCACGAAATCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATAGGCGGAATGCGTATGGCGTTGGAGCAAGCTGGGAAAG AGTTTGAAATCGTCTCCGCCATCGACGTGAATCCCATCGCAAACGAAGTTTACAAGCACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGGCGGAGAAAGTAACCAAACTAAAGGTCGATACGATCCCTGATGTCGCCGCCCTGTCAG CCTTCACGAGGAACGGACAAGTTTAACGATATCAACGATCGAAGGAGACGA CCATTTCTGCACATTTGCG AGCTGCTGGATTAAGATGCCGCTGGTAAAGTTCATACTTGATGGAAAACGTGAAAGGGTTTGAAAACCTCACAAGCC TGTGAGATGTACAAGGGCGCGCCCTGCTGGGAAGGACAGGTTTACACATACCAGCAGTACCATTACTATCG CGGACCAGTTNGGAGTGCCCAACAACTCGCCACCGGTACTACTGTATCGCAAAAACGCCCATGGAGCGGATTTTAAATGGANAGAGTGAAGATAATTATTACCACAACNGAAATCAGGNTTGGAGTGCAAAAGACNCAAACGATATGGGTTGGAACCGATATGTGGAACACAGCAGGAAGACGCATTGGAACAGTATGGGTTGAAAAGTGCGTACATTACTAAAGGNATCTT                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08MET             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    aa   CAAACG   TTGGTTGGAA CGAT TGTGG ACAC GCAGCAAGACGCATTGGAACAGTATGGGTTGAAAAGTGC TAAATTATTAAA GCATCTTCCACTGATGGACGTATGCACGCCGGAATCCACCAACTCGATGTGC TTTACGAAAGCGTACACGCATTACGCGGAAGGTACGGGTTCGGTGTACTGTCCACTTTCTAGGCAGGAATTCGACAGGACCTATGCCCTTGCGATGGGTGCCGAGGAGGACGAGGATCGAAAGCTTTTTGTGCTGCGGGAACTGCGCGTGCGATACTTTACCCCGAAAGAAGTGGCGCGATTGATGAGCTTTCCAGAGCATTTTAGCTTCCCAGATACGGTTACGAACAAGCAACGTTATCGTGTGCTGGGTAATAGCATAAACGTGTTTGTCGTCAGTGTGCTACTACACGAGCTGTAAATAAATACGTTGAATTTTGTGCAGTTAAAAAAAA]
[-] EMBL CNS09OK8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTTTCCAGAGCATTTTAGCTTCCCCGATACGGTTACGAACAAGCAACGTTTTCGTGTGCTGGGTAATAGCATAAACGTGTTTGTCGTCCGTG                                                      ]


>consensus_7831#0 ACCCACGCGTCCGCGGACGCGTGGCGCAACACGATGGAGAGCACGAAATCTGAACCGCAC AGAGTATTGGAACTTTTCAGCGGTATAGGCGGAATGCGTATGGCGTTGGAGCAAGCTGGG AAAGAGTTTGAAATCGTCTCCGCCATCGACGTGAATCCCATCGCAAACGAAGTTTACAAG CACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGGCGGAGAAA GTAACCAAACTAAAGGTCGATACGATCCTGATGTCGCCGCCCTGTCAGCCCTTCACGAGG AACGGAAAGTTTAACGATATCAACGATCGAAGGAGCGACCCATTTCTGCACATTTGCGAG CTGCTGGATAAGATGCCGCTGGTAAAGTTCATACTGATGGAAAACGTGAAAGGGTTTGAA AACTCACAAGCCTGTGAGATGTACAAGGCGCGCCTGCGGGAGGCAGGTTTCCACTACCAG CAGTACATACTATCGCCGCACCAGTTTGGCGTGCCCAACACTCGCCACCGGTACTACTGT ATCGCAAAACGCCATGGAGCGGATTTTAAATGGAAGAGTGAAGATATTATTACCACACCG CAATCAGGCTGCGGTGCAAAGCAAACGTTGGTTGGAACGATTGTGGACACGCAGCAAGAC GCATTGGAACAGTATGGGTTGAAAAGTGCTACATTACTAAAGCATCTTCCACTGATGGAC GTATGCACGCCGGAATCCACCAACTCGATGTGCTTTACGAAAGCGTACACGCATTACGCG GAAGGTACGGGTTCGGTGTACTGTCCACTTTCTAGGCAGGAATTCGACAGGACCTATGCC CTTGCGATGGGTGCCGAGGAGGACGAGGATCGAAAGCTTTCTGTGCTGCGGGAACTGCGC GTGCGATACTTTACCCCGAAAGAAGTGGCGCGATTTATGAGCTTTCCAGAGCATTTTAGC TTCCCAGATACGGTTACGAACAAGCAACGTTATCGTGTGCTGGGTAATAGCATAAACGTG TTTGTCGTCAGTGTGCTACTACACGAGCTGTAAATAAATACGTTGAATTTTGTGCAGTTA AAAAAAA



consensusID : consensus_7831#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 365
fasta sequence
                              [TCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATATGGGCGGCAATGCGTATGGCCGTTGGANCATGCGTGNGAAACAGTNTTGATAATCGNCTCCGTCNNCGACGTGACATCCCATCAGCAAAATTGAGAGTTCATANCGCCACCAATNNTCGTGAGCCCCATACGGGTCCGACANTTGGCAAATNATACTTGTCGGCCTACACGGCNGGTGCCAGCGTTGGCAATANCTACTAGAGTCCTAATCGCGGCAGTGCCTGATTTGTNCCNCGCTCCATGTGTACACNCTNACNACCGTAGAGTAGTCGNGCGACACGCTTGTTACAGGGACNTTTCAANGAGGAGTACAGCAGAGGAAGTCT]

[+] EMBL AL694442             [TCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATATGGGCGGCAATGCGTATGGCCGTTGGANCATGCGTGNGAAACAGTNTTGATAATCGNCTCCGTCNNCGACGTGACATCCCATCAGCAAAATTGAGAGTTCATANCGCCACCAATNNTCGTGAGCCCCATACGGGTCCGACANTTGGCAAATNATACTTGTCGGCCTACACGGCNGGTGCCAGCGTTGGCAATANCTACTAGAGTCCTAATCGCGGCAGTGCCTGATTTGTNCCNCGCTCCATGTGTACACNCTNACNACCGTAGAGTAGTCGNGCGACACGCTTGTTACAGGGACNTTTCAANGAGGAGTACAGCAGAGGAAGTCT]


>consensus_7831#1 TCTGAACCGCACAGAGTATTGGAACTTTTCAGCGGTATATGGGCGGCAATGCGTATGGCC GTTGGANCATGCGTGNGAAACAGTNTTGATAATCGNCTCCGTCNNCGACGTGACATCCCA TCAGCAAAATTGAGAGTTCATANCGCCACCAATNNTCGTGAGCCCCATACGGGTCCGACA NTTGGCAAATNATACTTGTCGGCCTACACGGCNGGTGCCAGCGTTGGCAATANCTACTAG AGTCCTAATCGCGGCAGTGCCTGATTTGTNCCNCGCTCCATGTGTACACNCTNACNACCG TAGAGTAGTCGNGCGACACGCTTGTTACAGGGACNTTTCAANGAGGAGTACAGCAGAGGA AGTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7831#0      ACCCACGCGTCCGCGGACGCGTGGCGCAACACGATGGAGAGCACGAAATCTGAACCGCAC 60
consensus_7831#1      ------------------------------------------------TCTGAACCGCAC 12
                                                                      ************

consensus_7831#0      AGAGTATTGGAACTTTTCAGCGGTATA--GGCGG-AATGCGTATGGC-GTTGGAGCAAGC 116
consensus_7831#1      AGAGTATTGGAACTTTTCAGCGGTATATGGGCGGCAATGCGTATGGCCGTTGGANCATGC 72
                      ***************************  ***** ************ ****** ** **

consensus_7831#0      -TGGGAAAGAGTTTGAA--ATCGTCTCCGCCATCGACGTGA-ATCCCATCGCAAACGAAG 172
consensus_7831#1      GTGNGAAACAGTNTTGATAATCGNCTCCGTCNNCGACGTGACATCCCATC---AGCAAAA 129
                       ** **** *** *  *  **** ***** *  ******** ********   * * ** 

consensus_7831#0      TTTACAAGCACAATTTCGGCGCAAAAACGGTCCGCAATGGAAATATACTGAGCCTAACGG 232
consensus_7831#1      TTGAGAG-------TTCATANCGCCACCAATNNTCGTGAGCCCCATAC-GGGTCCGACAN 181
                      ** * *        ***    *   * *  *   *    *    **** * * *  **  

consensus_7831#0      CGGAGAAAGTAACCAAACTAAAGGTCGATACGATCCTGATGTCGCCGCCCTGTCAGCCCT 292
consensus_7831#1      TTGGCAAATNATAC---TTGTCGGCCTACACGG--CNGGTGCCAGCG--TTGGCAATANC 234
                        *  ***  *  *    *   ** * * ***   * * ** *  **   ** **     

consensus_7831#0      TCACGAGGAACGGAAAGTTTAACGATATCAACGATCGAAGGAGCGACCCATTTCTGCACA 352
consensus_7831#1      T-ACTAGAGTCCTAAT-CGCGGCAGTGCC--TGATTTGTNCCNCGCTCCATGTGTACACN 290
                      * ** **   *  **       *  *  *   ***        **  **** * * *** 

consensus_7831#0      TTTGCGAGCTGCTGGATAAGATGCCGCTGGTAAAGTTCATACTGATGGAAAACGTGAAAG 412
consensus_7831#1      CTNACNA-CCGTAGAGTA----GTCG--NGCGACACGCTTGTTACAGGGACNTTTCAANG 343
                       *  * * * *  *  **    * **   *  *    * *  *   ** *    * ** *

consensus_7831#0      GGTTTGAAAACTCAC-AAGCCTGTGAGATGTACAAGGCGCGCCTGCGGGAGGCAGGTTTC 471
consensus_7831#1      AGGAGTACAGCAGAGGAAGTCT-------------------------------------- 365
                       *    * * *  *  *** **                                      

consensus_7831#0      CACTACCAGCAGTACATACTATCGCCGCACCAGTTTGGCGTGCCCAACACTCGCCACCGG 531
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      TACTACTGTATCGCAAAACGCCATGGAGCGGATTTTAAATGGAAGAGTGAAGATATTATT 591
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      ACCACACCGCAATCAGGCTGCGGTGCAAAGCAAACGTTGGTTGGAACGATTGTGGACACG 651
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      CAGCAAGACGCATTGGAACAGTATGGGTTGAAAAGTGCTACATTACTAAAGCATCTTCCA 711
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      CTGATGGACGTATGCACGCCGGAATCCACCAACTCGATGTGCTTTACGAAAGCGTACACG 771
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      CATTACGCGGAAGGTACGGGTTCGGTGTACTGTCCACTTTCTAGGCAGGAATTCGACAGG 831
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      ACCTATGCCCTTGCGATGGGTGCCGAGGAGGACGAGGATCGAAAGCTTTCTGTGCTGCGG 891
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      GAACTGCGCGTGCGATACTTTACCCCGAAAGAAGTGGCGCGATTTATGAGCTTTCCAGAG 951
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      CATTTTAGCTTCCCAGATACGGTTACGAACAAGCAACGTTATCGTGTGCTGGGTAATAGC 1011
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      ATAAACGTGTTTGTCGTCAGTGTGCTACTACACGAGCTGTAAATAAATACGTTGAATTTT 1071
consensus_7831#1      ------------------------------------------------------------
                                                                                  

consensus_7831#0      GTGCAGTTAAAAAAAA 1087
consensus_7831#1      ----------------
                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)