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Anopheles gambiae
cluster # 7833 cluster # 7833       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7833#0 length = 1381 sequences # 4  
consensus_7833#1 length = 888 sequences # 1  
consensus_7833#2 length = 709 sequences # 1  
consensus_7833#3 length = 702 sequences # 1  
consensus_7833#4 length = 514 sequences # 1  

consensusID : consensus_7833#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1381
fasta sequence
                              [CCGCACCGGGGTTGGAGAGTGGGTTTCGAAACCGACCCTTTATACCGCAAGTACCGCGTACAGTATGGTTCTCCCGCTATTGCTGTTGCTTACCTTCGGGGCATCAATCGGTGCCACCGATCCGGAGCTCGAGCGCAACGAGCTGGCCGCCCAGCGCTACGTCACCGATCTCGAGGCAGAGATACTGGCGCGCAACAACAACGCGACCGAGCTTTCGTGGGCCTACGAGTCGAACATTACGGAGGAGGCGCTAAAGCAGCGGAACGAGGCCGCATCGCGAAATGCGAACTTTTTCAAGGAAGTTGCCCGTGAGTTACGCCTGTACGATTACAACAACTTTAAAGATGCCGACCTGAAGCGACGTATCAAGAAGCTTACCGATTTGGGGTACGCTGCGCTGGATGAGACGAAATTCTCAGAGCTTGTCGATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGTGTGCCAGTACAAGAACGAGTCGAACTGCAACTACGGGCTGGAACCGGAGCTGACCGAGACGCTTGCAAAGAGCCGTGATCCGGAGGAGCTGAAACACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAAGCCGGTGAGGAAAGACTTTGATGAGTACGTGGCGCTGAATCGCGAGGCAGCTCAGCTGAACAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAGGATGACACGTTCGAAGCACAGGTTGATGCTGCGATCGAGCAAATCCGACCACTGTACGAACAGATCCATGCGTACGTGCGGTACAAGCTGAGGAAGCACTACGGCAATGATATTGTGTCCGAGAAGGGTCCGATTCCGATCCATCTGCTCGGTAACATGTGGGGACAGACGTGGGACAATATTGCCGATATAACGACACCCTTCCCGAACAAGAAGCTGCTTGACGTTACGGAAGAGATGGTGCGACAGGGCTACACCCCGCTGAAGATGTTCCAAATGGGCGATGAGTTCTTCCAGTCGCTGAACATGACCAAACTGCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATTTCTATAAGAAGGATGATGTGCGCATTAAGCAGTGCACACGAGTCAACATGGAGGACTTCTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTATCAGCACCTTCCAAGCGTTTACCGCGAGGGAGCCAACCCAGGCTTCCACGAGGCCGTCGGTGACGTTCTTTCCCTGTCTGTTTCAACACCGAAACATTTAGAAAAGATTGGACTGCTGAAGGACTACGTTGAAGACGAGGAATCGAAGCTCAATCAGTTCTACCAAGCTGGT]

[+] EMBL BM628360             [CCGCACCGGGGTTGGAGAGTGGGTTTCGAAACCGACCCTTTATACCGCAAGTACCGCGTACAGTATGGTTCTCCCGCTATTGCTGTTGCTTACCTTCGGGGCATCAATCGGTGCCACCGATCCGGAGCTCGAGCGCAACGAGCTGGCCGCCCAGCGCTACGTCACCGATCTCGAGGCAGAGATACTGGCGCGCAACAACAACGCGACCGAGCTTTCGTGGGCCTACGAGTCGAACATTACGGAGGAGGCGCTAAAGCAGCGGAACGAGGCCGCATCGCGAAATGCGAACTTTTTCAAGGAAGTTGCCCGTGAGTTACGCCTGTACGATTACAACAACTTTAAAGATGCCGACCTGAAGCGACGTATCAAGAAGCTTACCGATTTGGGGTACGCTGCGCTGGATGAGACGAAATTCTCAGAGCTTGTCGATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGTGTGCCAGTACAAGAACGAGTCGAACTGCAACTACGGGCTGGAACCGGAGCTGACCGAGACGCTTGCAAAGAGCCGTGATCCGGAGGAGCTGAAACACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAAGCCGGTGAGGAAAGACTTTGATGAGTACGTGGCGCTGAATCGCGAGGCAGCTCAGCTGAACAATTTTACGTCTGGTGCTGAGTACTGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM586309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccGATCCGGATGAGCTGAAGCACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAAGCCGGTAAGGAAAGACTTTGATGAGTACGTGGCGCTGAATCGCGAGGCAGCTCAGCTGAACAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAGGATGACACGTTCGAAGCACAGGTTGATGCTGCGATCGAGCAAATCCGACCACTGTACGAACAGATCCATGCGTACGTGCGGTACAAGCTGAGGAAGCACTACGGCAATGATATTGTGTCCGAGAAGGGTCCGATTCCGATCCATCTGCTCGGTAACATGTGGGGACAGACGTGGGACAATATTGCCGATATAACGACACCCTTCCCGAACAAGAAGCTGCTTGACGTTACGGAAGAGATGGTGCGACAGGGCTACACCCCGCTGAAGATGTTCCAAATGGGCGATGAGTTCTTCCAGTCGCTGAACATGACCAAACTGCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATTTCTATAAGAAGGATGATGTGCGCATTAAGCAGTGCACACGAGTCAACATGGAAGACTTCTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTATCAGCAC                                                                                                                                                                     ]
[+] EMBL BX628386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GACTTTGATGAGTACGTGGCGCTGAATCGCGAGGCAGCTCAGCTGAACAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAGGATGACACGTTCGAAGCACAGGTTGATGCTGCGATCGAGCAAATCCGACCACTGTACGAACAGATCCATGCGTACGTGCGGTACAAGCTGAGGAAGCACTACGGCAATGATATTGTGTCCGAGAAGGGTCCGATTCCGATCCATCTGCTCGGTAACATGTGGGGACAGACGTGGGACAATATTGCCGATATAACGACACCCTTCCCGAACAAGAAGCTGCTTGACGTTACGGAAGAGATGGTGCGACAGGGCTACACCCCGCTGAAGATGTTCCAAATGGGCGATGAGTTCTTCCAGTCGCTGAACATGACCAAACTGCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATTTCTATAAGAAGGATGATGTGCGCATTAAGCAGTGCACACGAGTCAACATGGAGGACTTCTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTATCAGCACCTTCCAAGCGTTTACCGCGAGGG                                                                                                                                              ]
[+] EMBL BM605493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgGTACGAACAGATCCATGCGTACGTTCGGTACAAGCTGAGGAAGCACTACGGTAATGATATTGTGTCCGAGAAGGGTCCGATTCCGATCCATCTGCTCGGTAACATGTGGGGACAGACGTGGGACAATATTGCCGATATAACGACACCCTTCCCGAACAAGAAGCTGCTTGACGTTACAGAGGAGATGGTGCGACAGGGCTACACCCCGCTGAAGATGTTCCAAATGGGCGATGAGTTCTTCCAGTCGCTGAACATGACCAAACTGCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATTTCTACAAGAAGGATGATGTGCGCATTAAGCAGTGCACACGAGTCAACATGGAGGACTTCTTCACCGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTATCAGCACCTTCCAAGCGTTTACCGCGAGGGAGCCAACCCAGGCTTCCACGAGGCCGTCGGTGACGTTCTTTCCCTGTCTGTTTCAACACCGAAACATTTAGAAAAGATTGGACTGCTGAAGGACTACGTTGAAGACGAGGAATCGAAGCTCAATCAGTTCTACCAAGCTGGT]


>consensus_7833#0 CCGCACCGGGGTTGGAGAGTGGGTTTCGAAACCGACCCTTTATACCGCAAGTACCGCGTA CAGTATGGTTCTCCCGCTATTGCTGTTGCTTACCTTCGGGGCATCAATCGGTGCCACCGA TCCGGAGCTCGAGCGCAACGAGCTGGCCGCCCAGCGCTACGTCACCGATCTCGAGGCAGA GATACTGGCGCGCAACAACAACGCGACCGAGCTTTCGTGGGCCTACGAGTCGAACATTAC GGAGGAGGCGCTAAAGCAGCGGAACGAGGCCGCATCGCGAAATGCGAACTTTTTCAAGGA AGTTGCCCGTGAGTTACGCCTGTACGATTACAACAACTTTAAAGATGCCGACCTGAAGCG ACGTATCAAGAAGCTTACCGATTTGGGGTACGCTGCGCTGGATGAGACGAAATTCTCAGA GCTTGTCGATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGTGTGCCAGTA CAAGAACGAGTCGAACTGCAACTACGGGCTGGAACCGGAGCTGACCGAGACGCTTGCAAA GAGCCGTGATCCGGAGGAGCTGAAACACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAA GCCGGTGAGGAAAGACTTTGATGAGTACGTGGCGCTGAATCGCGAGGCAGCTCAGCTGAA CAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAGGATGACACGTTCGAAGC ACAGGTTGATGCTGCGATCGAGCAAATCCGACCACTGTACGAACAGATCCATGCGTACGT GCGGTACAAGCTGAGGAAGCACTACGGCAATGATATTGTGTCCGAGAAGGGTCCGATTCC GATCCATCTGCTCGGTAACATGTGGGGACAGACGTGGGACAATATTGCCGATATAACGAC ACCCTTCCCGAACAAGAAGCTGCTTGACGTTACGGAAGAGATGGTGCGACAGGGCTACAC CCCGCTGAAGATGTTCCAAATGGGCGATGAGTTCTTCCAGTCGCTGAACATGACCAAACT GCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGT ATGCCATGCCAGTGCGTGGGATTTCTATAAGAAGGATGATGTGCGCATTAAGCAGTGCAC ACGAGTCAACATGGAGGACTTCTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTA TCTGCAGTATCAGCACCTTCCAAGCGTTTACCGCGAGGGAGCCAACCCAGGCTTCCACGA GGCCGTCGGTGACGTTCTTTCCCTGTCTGTTTCAACACCGAAACATTTAGAAAAGATTGG ACTGCTGAAGGACTACGTTGAAGACGAGGAATCGAAGCTCAATCAGTTCTACCAAGCTGG T



consensusID : consensus_7833#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 888
fasta sequence
                              [CTAACANTCACCCAGGTTTAACGAGGCGGGTANGAGCAGCGTAGAACNAGGCGCGATGCTGAATCTGCGAAACTGCATCTATGCAATGGANNNGGGNGTGACTCCTGCTATGGNATTATGACAAACTTAAANATATCGACCTGGAANANCGCCGTCATNAAGTAAAGCNTNCCAGGATTAGGGGTANGCTGCNTCGNNGACTTTAGACNANAGTTACTTCAGAAGCTTGTCNNATTGNGATANCCTNGCCTNGCATGGAAAATTATCNCCACACGNNTCNAGGNTGTGNCAGCTACACATAACGAGTCNAACTGCAACTACGGGCTGGCAGCCGGAGACTTGACCTGAGACTGCTTGCAAAGAGCCGTGATCCGGATGAGCTGAAGCACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAAGCCGGTAAGGANAAGACTTTGATGAGTACGTGGCGCTGAATCGCTGAGGCAGCTCAGCTGAACAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAGGATGACACGTTCGAAGCACAGGTTTATGCTGCGATCGAGCAAATCCGACCACTGTACGAACAGGATCCATGCGGTACGGTGCGGGTACAAAGCTGAGGGAAAGCACTAACGGCGCAATGAATATTTGTGGTCCGGAGAAGGGTCCCGATTCCCGGATTCCAATCTNGNTTCGCGGTAACACATGTTGGGGGACAGACGTTNGGGACACTATTGNCCGNTATTAACANGACNCCCTTTCCCGAACAAGCAAGCTGGTNTGAAGTTACGGNAAACNATTTGTGCGCAACGGGTACACCCCGGCTGAANAATTTTCCAAACTGGGATAGATTTCTACAGCNGTNACACTTACAATGGCTCCCATT]

[+] EMBL AL932478             [CTAACANTCACCCAGGTTTAACGAGGCGGGTANGAGCAGCGTAGAACNAGGCGCGATGCTGAATCTGCGAAACTGCATCTATGCAATGGANNNGGGNGTGACTCCTGCTATGGNATTATGACAAACTTAAANATATCGACCTGGAANANCGCCGTCATNAAGTAAAGCNTNCCAGGATTAGGGGTANGCTGCNTCGNNGACTTTAGACNANAGTTACTTCAGAAGCTTGTCNNATTGNGATANCCTNGCCTNGCATGGAAAATTATCNCCACACGNNTCNAGGNTGTGNCAGCTACACATAACGAGTCNAACTGCAACTACGGGCTGGCAGCCGGAGACTTGACCTGAGACTGCTTGCAAAGAGCCGTGATCCGGATGAGCTGAAGCACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAAGCCGGTAAGGANAAGACTTTGATGAGTACGTGGCGCTGAATCGCTGAGGCAGCTCAGCTGAACAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAGGATGACACGTTCGAAGCACAGGTTTATGCTGCGATCGAGCAAATCCGACCACTGTACGAACAGGATCCATGCGGTACGGTGCGGGTACAAAGCTGAGGGAAAGCACTAACGGCGCAATGAATATTTGTGGTCCGGAGAAGGGTCCCGATTCCCGGATTCCAATCTNGNTTCGCGGTAACACATGTTGGGGGACAGACGTTNGGGACACTATTGNCCGNTATTAACANGACNCCCTTTCCCGAACAAGCAAGCTGGTNTGAAGTTACGGNAAACNATTTGTGCGCAACGGGTACACCCCGGCTGAANAATTTTCCAAACTGGGATAGATTTCTACAGCNGTNACACTTACAATGGCTCCCATT]


>consensus_7833#1 CTAACANTCACCCAGGTTTAACGAGGCGGGTANGAGCAGCGTAGAACNAGGCGCGATGCT GAATCTGCGAAACTGCATCTATGCAATGGANNNGGGNGTGACTCCTGCTATGGNATTATG ACAAACTTAAANATATCGACCTGGAANANCGCCGTCATNAAGTAAAGCNTNCCAGGATTA GGGGTANGCTGCNTCGNNGACTTTAGACNANAGTTACTTCAGAAGCTTGTCNNATTGNGA TANCCTNGCCTNGCATGGAAAATTATCNCCACACGNNTCNAGGNTGTGNCAGCTACACAT AACGAGTCNAACTGCAACTACGGGCTGGCAGCCGGAGACTTGACCTGAGACTGCTTGCAA AGAGCCGTGATCCGGATGAGCTGAAGCACTACTGGGTGCAGTGGCACGAGGTGTCCGGCA AGCCGGTAAGGANAAGACTTTGATGAGTACGTGGCGCTGAATCGCTGAGGCAGCTCAGCT GAACAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAGGATGACACGTTCGA AGCACAGGTTTATGCTGCGATCGAGCAAATCCGACCACTGTACGAACAGGATCCATGCGG TACGGTGCGGGTACAAAGCTGAGGGAAAGCACTAACGGCGCAATGAATATTTGTGGTCCG GAGAAGGGTCCCGATTCCCGGATTCCAATCTNGNTTCGCGGTAACACATGTTGGGGGACA GACGTTNGGGACACTATTGNCCGNTATTAACANGACNCCCTTTCCCGAACAAGCAAGCTG GTNTGAAGTTACGGNAAACNATTTGTGCGCAACGGGTACACCCCGGCTGAANAATTTTCC AAACTGGGATAGATTTCTACAGCNGTNACACTTACAATGGCTCCCATT



consensusID : consensus_7833#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 709
fasta sequence
                              [ATNGCCCGAGGTTNGCGATGAGTCTTCCAGTCGCTGAACATGACCAAACTGCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATTTCTATAAGAAGGATGATGTGCGCATTAAGCAGTGCACACGAGTCAACATGGAGGACTTCTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTATCAGCACCTTCCAAGCGTTTACCGCGAGGGAGCCAACCCTGGCTTCCACGAGGCCGTCGGTGACGTTCTTTCCCTGTCTGTTTCAACACCGAAACATTTAGAAAAGATTGGACTGCTGAAGGACTACGTTGAAGACGAGGAATCGAAGCTTAATCAGTTCTACCAAGCTGGTCTGGCGAAGCTGGTGTTCCTGCCGTTTGCCTACACACTGGACAAGTATCGCTGGGAAATATTCCGTGGTGACGTTAAGCCAGAACATTACAACTGCAAGTTCTGGGAGATGCGCACGAAAATATTCGGGGCGTTGAGCCACCGGTGGAGCGAAGCGGAGAGCGATTTTGACGCTGCGGGCAAGTACCATGTGTCGGCTGATGTTGAGTATCTGNGATACTTTGGTCCGTACATCGTACNATTCCACGTTCATCGGCCGGTTGCGAAAAGGCTGGCACTACTGAAGGGCGACCGAGAAA]

[+] EMBL AL932678             [ATNGCCCGAGGTTNGCGATGAGTCTTCCAGTCGCTGAACATGACCAAACTGCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATTTCTATAAGAAGGATGATGTGCGCATTAAGCAGTGCACACGAGTCAACATGGAGGACTTCTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTATCAGCACCTTCCAAGCGTTTACCGCGAGGGAGCCAACCCTGGCTTCCACGAGGCCGTCGGTGACGTTCTTTCCCTGTCTGTTTCAACACCGAAACATTTAGAAAAGATTGGACTGCTGAAGGACTACGTTGAAGACGAGGAATCGAAGCTTAATCAGTTCTACCAAGCTGGTCTGGCGAAGCTGGTGTTCCTGCCGTTTGCCTACACACTGGACAAGTATCGCTGGGAAATATTCCGTGGTGACGTTAAGCCAGAACATTACAACTGCAAGTTCTGGGAGATGCGCACGAAAATATTCGGGGCGTTGAGCCACCGGTGGAGCGAAGCGGAGAGCGATTTTGACGCTGCGGGCAAGTACCATGTGTCGGCTGATGTTGAGTATCTGNGATACTTTGGTCCGTACATCGTACNATTCCACGTTCATCGGCCGGTTGCGAAAAGGCTGGCACTACTGAAGGGCGACCGAGAAA]


>consensus_7833#2 ATNGCCCGAGGTTNGCGATGAGTCTTCCAGTCGCTGAACATGACCAAACTGCCATCCACA TTCTGGGAGAAGAGCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCC AGTGCGTGGGATTTCTATAAGAAGGATGATGTGCGCATTAAGCAGTGCACACGAGTCAAC ATGGAGGACTTCTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTAT CAGCACCTTCCAAGCGTTTACCGCGAGGGAGCCAACCCTGGCTTCCACGAGGCCGTCGGT GACGTTCTTTCCCTGTCTGTTTCAACACCGAAACATTTAGAAAAGATTGGACTGCTGAAG GACTACGTTGAAGACGAGGAATCGAAGCTTAATCAGTTCTACCAAGCTGGTCTGGCGAAG CTGGTGTTCCTGCCGTTTGCCTACACACTGGACAAGTATCGCTGGGAAATATTCCGTGGT GACGTTAAGCCAGAACATTACAACTGCAAGTTCTGGGAGATGCGCACGAAAATATTCGGG GCGTTGAGCCACCGGTGGAGCGAAGCGGAGAGCGATTTTGACGCTGCGGGCAAGTACCAT GTGTCGGCTGATGTTGAGTATCTGNGATACTTTGGTCCGTACATCGTACNATTCCACGTT CATCGGCCGGTTGCGAAAAGGCTGGCACTACTGAAGGGCGACCGAGAAA



consensusID : consensus_7833#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 702
fasta sequence
                              [CCGCGGACGCGTGGGCTTTGAAGTGTGAGCCAAACGTATCTTGGAGAAACCGATTCCGATCGCTCAACCTGGTACCGATCAACCAGTGCTGCTAGGCGCCATGGCGTACGCAGGCTTGAAGGAAGTGTTTGTGGTGCTGGTGTTAATTGGCGTAAGGTCGACGGTCCTAGCGCTGGCCGCCAGCGACCTGAGTGAGCTGGAAGCGAGTGAACTGATGGCACGAAACTTTCTGAACGAGCTGGAGGATGATATTCTGGAGATTAACTACAACACCACCCTGCAGTCCTGGAACTACGAAACGAATATTACCGACGATACGCTCGACATGCGCAACGATGCCGTTGATGATCAGGGGCGCTTTCTGAAGGAAGTTGCCCGTGAGTTACGCCTGTACGATTACAACAACTTTAAAGATGCCGACCTGAAGCGACGTATCAAGAAGCTTACCGATTTGGGGTACGCTGCGCTGGATGAGACGAAATTCTCAGAGCTTGTCGATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGTGTGCCAGTACAAGAACGAGTCGAACTGCAACTACGGGCTGGAACCGGAGCTGACCGAGACGCTTGCAAAGAGCCGTGATCCGGAGGAGCTGAAACACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAAGCCGGTGAGGAAAGACTTTGATGAGTACGTGGC]

[+] EMBL BM619403             [CCGCGGACGCGTGGGCTTTGAAGTGTGAGCCAAACGTATCTTGGAGAAACCGATTCCGATCGCTCAACCTGGTACCGATCAACCAGTGCTGCTAGGCGCCATGGCGTACGCAGGCTTGAAGGAAGTGTTTGTGGTGCTGGTGTTAATTGGCGTAAGGTCGACGGTCCTAGCGCTGGCCGCCAGCGACCTGAGTGAGCTGGAAGCGAGTGAACTGATGGCACGAAACTTTCTGAACGAGCTGGAGGATGATATTCTGGAGATTAACTACAACACCACCCTGCAGTCCTGGAACTACGAAACGAATATTACCGACGATACGCTCGACATGCGCAACGATGCCGTTGATGATCAGGGGCGCTTTCTGAAGGAAGTTGCCCGTGAGTTACGCCTGTACGATTACAACAACTTTAAAGATGCCGACCTGAAGCGACGTATCAAGAAGCTTACCGATTTGGGGTACGCTGCGCTGGATGAGACGAAATTCTCAGAGCTTGTCGATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGTGTGCCAGTACAAGAACGAGTCGAACTGCAACTACGGGCTGGAACCGGAGCTGACCGAGACGCTTGCAAAGAGCCGTGATCCGGAGGAGCTGAAACACTACTGGGTGCAGTGGCACGAGGTGTCCGGCAAGCCGGTGAGGAAAGACTTTGATGAGTACGTGGC]


>consensus_7833#3 CCGCGGACGCGTGGGCTTTGAAGTGTGAGCCAAACGTATCTTGGAGAAACCGATTCCGAT CGCTCAACCTGGTACCGATCAACCAGTGCTGCTAGGCGCCATGGCGTACGCAGGCTTGAA GGAAGTGTTTGTGGTGCTGGTGTTAATTGGCGTAAGGTCGACGGTCCTAGCGCTGGCCGC CAGCGACCTGAGTGAGCTGGAAGCGAGTGAACTGATGGCACGAAACTTTCTGAACGAGCT GGAGGATGATATTCTGGAGATTAACTACAACACCACCCTGCAGTCCTGGAACTACGAAAC GAATATTACCGACGATACGCTCGACATGCGCAACGATGCCGTTGATGATCAGGGGCGCTT TCTGAAGGAAGTTGCCCGTGAGTTACGCCTGTACGATTACAACAACTTTAAAGATGCCGA CCTGAAGCGACGTATCAAGAAGCTTACCGATTTGGGGTACGCTGCGCTGGATGAGACGAA ATTCTCAGAGCTTGTCGATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGT GTGCCAGTACAAGAACGAGTCGAACTGCAACTACGGGCTGGAACCGGAGCTGACCGAGAC GCTTGCAAAGAGCCGTGATCCGGAGGAGCTGAAACACTACTGGGTGCAGTGGCACGAGGT GTCCGGCAAGCCGGTGAGGAAAGACTTTGATGAGTACGTGGC



consensusID : consensus_7833#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence
                              [CCGTGGTGACGTTAAGCCAGAACATTACAACTGCAAGTTCTGGGAGATGCGCACGAAATATTCGGGCGTTGAGCCACCGGTGGAGCGAAGCGAGAGCGATTTTGACGCTGCGGCCAAGTACCATGTGTCGGCTGATGTTGAGTATCTGCGATACTTTGTGTCGTACATCGTACAGTTCCAGTTCCATCGGGCGGCTTGCGAAAAGGCTGGCCAGTACGTGAAGGGCGATCCGGAGAAAACGGTAAACAACTGTGACATCTACCAGAGCACTGAGGCAGGTAATGCACTGAAGGCGATGTTGGCTATGGGCTCTTCCAAACCGTGGCCGGATGCGATGGAGGTGCTGACTGGACAGCGCAAGATGAGCGCCGATGCGCTGATTGAATACTTCCAGCCATTGTACGATTGGTTGGTGAAGGAAAATAAGGCTCTTGGAGCACATGTTGGATGGGAGGAAAAGCCCAAGTGCAAATCAGCTTAAATACACAACACATCCTTCGTTTTTGATCTCCAG]

[+] EMBL BX628228             [CCGTGGTGACGTTAAGCCAGAACATTACAACTGCAAGTTCTGGGAGATGCGCACGAAATATTCGGGCGTTGAGCCACCGGTGGAGCGAAGCGAGAGCGATTTTGACGCTGCGGCCAAGTACCATGTGTCGGCTGATGTTGAGTATCTGCGATACTTTGTGTCGTACATCGTACAGTTCCAGTTCCATCGGGCGGCTTGCGAAAAGGCTGGCCAGTACGTGAAGGGCGATCCGGAGAAAACGGTAAACAACTGTGACATCTACCAGAGCACTGAGGCAGGTAATGCACTGAAGGCGATGTTGGCTATGGGCTCTTCCAAACCGTGGCCGGATGCGATGGAGGTGCTGACTGGACAGCGCAAGATGAGCGCCGATGCGCTGATTGAATACTTCCAGCCATTGTACGATTGGTTGGTGAAGGAAAATAAGGCTCTTGGAGCACATGTTGGATGGGAGGAAAAGCCCAAGTGCAAATCAGCTTAAATACACAACACATCCTTCGTTTTTGATCTCCAG]


>consensus_7833#4 CCGTGGTGACGTTAAGCCAGAACATTACAACTGCAAGTTCTGGGAGATGCGCACGAAATA TTCGGGCGTTGAGCCACCGGTGGAGCGAAGCGAGAGCGATTTTGACGCTGCGGCCAAGTA CCATGTGTCGGCTGATGTTGAGTATCTGCGATACTTTGTGTCGTACATCGTACAGTTCCA GTTCCATCGGGCGGCTTGCGAAAAGGCTGGCCAGTACGTGAAGGGCGATCCGGAGAAAAC GGTAAACAACTGTGACATCTACCAGAGCACTGAGGCAGGTAATGCACTGAAGGCGATGTT GGCTATGGGCTCTTCCAAACCGTGGCCGGATGCGATGGAGGTGCTGACTGGACAGCGCAA GATGAGCGCCGATGCGCTGATTGAATACTTCCAGCCATTGTACGATTGGTTGGTGAAGGA AAATAAGGCTCTTGGAGCACATGTTGGATGGGAGGAAAAGCCCAAGTGCAAATCAGCTTA AATACACAACACATCCTTCGTTTTTGATCTCCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7833#0      ----------------------------------------------CCGCACCGGGGTTG 14
consensus_7833#3      -CCGCGGACGCGTGGGCTT--TGAAGTGTGAGCCAAACGTATCTTGGAGAAACCGATTCC 57
consensus_7833#1      CTAACANTCACCCAGGTTTAACGAGGCGGGTANGAGCAGCGTAGAACNAGGCGCGATGCT 60
consensus_7833#2      -----------------------------------------ATNGCCCGAGGTTNGCGAT 19
consensus_7833#4      -----------------------------------------------------CCGTGGT 7
                                                                                  

consensus_7833#0      GAGAGTGGGTTTCGAAACCGACCCTTTA-TACCGCAAG----------TACCGCGT-AC- 61
consensus_7833#3      GATCGCTCAACCTGGTACCGATCAACCAGTGCTGCTAGG------CGCCATGGCGT-ACG 110
consensus_7833#1      GAATCTGCGAAACTGCATCTATGCAATGGANNNGGGNGTGACTCCTGCTATGGNATTATG 120
consensus_7833#2      GAGTCTTCCAGTCGCTGAACATGACCAA--ACTGCCATCCA----CATTCTGGGAGAAGA 73
consensus_7833#4      GA--CGTTAAGCCA--GAACATTAC--A--ACTGCAA---------GTTCTGGGAGATGC 50
                      **                  *            *                  *       

consensus_7833#0      ---------AGTATGGTT-C-TCCCGCTATTGCTGTTGCTTACCTTCGGGGCATCAATC- 109
consensus_7833#3      -CAGGCTTGAAGGAAGTG-T-TTGTGGTGCTGGTGTTAATTGGCGTAAGGTCGACGGTCC 167
consensus_7833#1      ACAAACTTAAANATATCGAC-CTGGAANANCGCCGTCATNAAGTAAAGCNTNCCAGGATT 179
consensus_7833#2      GCATTCTGGAAAAGCCAAACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATT 133
consensus_7833#4      GCAC---GAAATATTCGGGCGTTGAGCCACCGGTGGAGCGA------AGCGAGAGCGATT 101
                               *                     *                            

consensus_7833#0      --------GGTGCC--ACCGATCCG---GAGCTCGAGCGCAACGAGCTGGCCGCCC-AGC 155
consensus_7833#3      TAGCGCTGGCCGCC--AGCGACCTGAGTGAGCTGGAAGCGAGTGAACTGATGGCAC-GAA 224
consensus_7833#1      AGGGGTANGCTGCNTCGNNGACTTTAGACNANAGTTACTTCAGAAGCTTGTCNNATTGNG 239
consensus_7833#2      TCTATAAGAAGGAT---GATGTGCGCATTAAGCAGTG-CACACGAGTCAACATGGA-GGA 188
consensus_7833#4      TT---------GAC---GCTGCG---GCCAAGTACCA-TGTGTCGGCTGATGTTGA-GTA 144
                                 *                                                

consensus_7833#0      GCTACGTCACCGATC-TCGAGGCAGAG---------ATACTGGCGCGCAACAACAACGC- 204
consensus_7833#3      ACTTTCTGAACGAGC-TGGAGGATGAT---------ATTCTGGAGATTAACTACAACAC- 273
consensus_7833#1      ATANCCTNGCCTNGCATGGAAAATTATCNCCACACGNNTCNAGGNTGTGNCAGCTACACA 299
consensus_7833#2      CTT-CTTCACTGTGCATCACGAGCTGGGACACATCCAGTACTATCTGCAGTATCAGCAC- 246
consensus_7833#4      TCTGCGATACTTTGTGTC-------------------GTACATCGTACAGTTCCAGTTC- 184
                                      *                                    *    * 

consensus_7833#0      GACCGAGCTTTCGTGGGCCTACGAGTCGAACATTACGGAGGAGGCGCTAAAG-CAGCGGA 263
consensus_7833#3      CACCCTGCAGTCCTGGAACTACGAAACGAATATTACCGACGATACGCTCGAC-ATGCGCA 332
consensus_7833#1      TAACGAGTCNAACTGCAACTACGGGCTGGCAGCCGGAGACTTGACCTGAGACTGCTTGCA 359
consensus_7833#2      CTTCCAAGCGTTTA----CCGCGAGGGAGCCAAC-CCTGGCTTCCACGAGGCCGTCGGTG 301
consensus_7833#4      CATCGGGCGGCTT-------GCGAAAAGGCTGGC-C--AGTACGTGAAGGGCGATCCGGA 234
                         *                 **                                  *  

consensus_7833#0      ACGA----GGCCGCATCGCGAAATGCGAACTTTTTCAAGGAAGTTGCCCG--TGAGTTAC 317
consensus_7833#3      ACGA----TGCCGTTGATGATCAGGGGCGCTTTCTGAAGGAAGTTGCCCG--TGAGTTAC 386
consensus_7833#1      AAGAGCCGTGATCCGGATGAGCTGAAGCACTA-CTGGGTGCAGTGGCACG--AGGTGTCC 416
consensus_7833#2      ACGT-----TCTTTCCCTGTCTGTTTCAAC-ACCGAAACATTTAGAAAAGATTGGACTGC 355
consensus_7833#4      GAAA-----ACGGTAAACAACTGTGACATCTACCAGAGCACTGAGGCAGG--TAATGCAC 287
                                                   *                   *         *

consensus_7833#0      GCCTGTACGATTACAACAA--CTTTAAAGA---TGCCGACCTGAAGCGACGTATCAAG-A 371
consensus_7833#3      GCCTGTACGATTACAACAA--CTTTAAAGA---TGCCGACCTGAAGCGACGTATCAAG-A 440
consensus_7833#1      GGCAAGCCGGTAAGGANAAGACTTTGATGAGTACGTGGCGCTGAATCGCTGAGGCAGC-T 475
consensus_7833#2      TGAAGGACTACGTTGAAGACGAGGAAT--CGAAGCTTAATCAGTT-CTACCAAGCTGGTC 412
consensus_7833#4      TGAAGG-CGATGTTGGCTATGGGCTCTTCCAAACCGTGGCCGGATGCGATGGAGGTG--C 344
                             *          *                     * *   *             

consensus_7833#0      -AGCTTACCG---ATTTGGGGTACGCTGCGCTGGATGAGACGAAATTCTCAGAGCTTGTC 427
consensus_7833#3      -AGCTTACCG---ATTTGGGGTACGCTGCGCTGGATGAGACGAAATTCTCAGAGCTTGTC 496
consensus_7833#1      CAGCTGAACA---ATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATGAG---GAT 529
consensus_7833#2      TGGCGAAGCTGGTGTTCCTGCCGTTTGCCTACACACTGGACAAGTATCGCTGGG---AAA 469
consensus_7833#4      TGACTGGACA---GCGCAAGATGAGCGCCGATGCGCTGATTGAATACTTCCAGC---CAT 398
                         *    *                   *                               

consensus_7833#0      GATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGTGTGCCAGTACAAGAAC 487
consensus_7833#3      GATGCGATTTCGCGCATGCAGGAAAACTACGCCACCGCCAAGGTGTGCCAGTACAAGAAC 556
consensus_7833#1      GACACG-TTCGAAGCACAGGTTTATGCTGCGAT-CGAGCAAATCCGACCACTGTACGAAC 587
consensus_7833#2      TATTCCGTGGTGACGTTAAGCCAGAACATTACAACTGCAAGTTCTGGGAGATGCGCACGA 529
consensus_7833#4      TGTACGATTG-GTTGGTGAAGGAAAATAAGGCTCTTGGAGCACATGTTGGATGGGAGGAA 457
                          *  *                                           *        

consensus_7833#0      GAGTCGAACTGCAACTACGGG-CTGGAACCGGAGCTGACCGAGA-CGCT-----TGCAAA 540
consensus_7833#3      GAGTCGAACTGCAACTACGGG-CTGGAACCGGAGCTGACCGAGA-CGCT-----TGCAAA 609
consensus_7833#1      AGGATCCA-TGCGG-TACGGT-GCGGGTACAAAGCTGAGGGAAAGCACTAACGGCGCAAT 644
consensus_7833#2      AAATATTCGGGGCGTTGAGCCACCGGTGGAGCGAAGCGGAGAGCGATTTTGACGCTGCGG 589
consensus_7833#4      AAGCCCAAGTGCAAATCAGCT--TAAATACACAACACATCCTTCGTTTTTGAT-CTCCAG 514
                                *    *  *                             *           

consensus_7833#0      GAGC---CGTGATCCGGAGGAG----------CTGAAACACTA--CTGGGT--GCAGTGG 583
consensus_7833#3      GAGC---CGTGATCCGGAGGAG----------CTGAAACACTA--CTGGGT--GCAGTGG 652
consensus_7833#1      GAATATTTGTGGTCCGGAGAAGGGTCCCGATTCCCGGATTCCAATCTNGNTTCGCGGTAA 704
consensus_7833#2      GCAAGTACCATGTGTCGGCTGATGTTGAGTATCTGNGATACTTTGGTCCGTACATCGTAC 649
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      CACGAGGTGTCCGGCAAGCCGGTGAGGAAAGACTTT--GATGAGTACGTGGCGCTGAATC 641
consensus_7833#3      CACGAGGTGTCCGGCAAGCCGGTGAGGAAAGACTTT--GATGAGTACGTGGC-------- 702
consensus_7833#1      CACATGTTGGGGGACAGACGTTNGGGACACTATTGNCCGNTATTAACANGACNCCCTTTC 764
consensus_7833#2      NATTCCACGTTCATCGGCCGGTTGCGAAAAGGCTGGCACTACTGAAGGGCGACCGAGAAA 709
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      GCGAGGCAGCTCAGCTGAACAATTTTACGTCTGGTGCGGAGTACTGGCTGGATGCGTATG 701
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      CCGAACAAGCAAGCTGGTNTGAAGTTACGGNAAACNATTTGTGCGCAACGGGTACACCCC 824
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      AGGATGACACGTTCGAAGCACAGGTTGATGCTGCGATCGAGCAAATCCGACCACTGTACG 761
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      GGCTGAANAATTTTCCAAACTGGGATAGATTTCTACAGCNGTNACACTTACAATGGCTCC 884
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      AACAGATCCATGCGTACGTGCGGTACAAGCTGAGGAAGCACTACGGCAATGATATTGTGT 821
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      CATT-------------------------------------------------------- 888
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      CCGAGAAGGGTCCGATTCCGATCCATCTGCTCGGTAACATGTGGGGACAGACGTGGGACA 881
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      ATATTGCCGATATAACGACACCCTTCCCGAACAAGAAGCTGCTTGACGTTACGGAAGAGA 941
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      TGGTGCGACAGGGCTACACCCCGCTGAAGATGTTCCAAATGGGCGATGAGTTCTTCCAGT 1001
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      CGCTGAACATGACCAAACTGCCATCCACATTCTGGGAGAAGAGCATTCTGGAAAAGCCAA 1061
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      ACGATGGGCGTGAGCTTGTATGCCATGCCAGTGCGTGGGATTTCTATAAGAAGGATGATG 1121
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      TGCGCATTAAGCAGTGCACACGAGTCAACATGGAGGACTTCTTCACTGTGCATCACGAGC 1181
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      TGGGACACATCCAGTACTATCTGCAGTATCAGCACCTTCCAAGCGTTTACCGCGAGGGAG 1241
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      CCAACCCAGGCTTCCACGAGGCCGTCGGTGACGTTCTTTCCCTGTCTGTTTCAACACCGA 1301
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      AACATTTAGAAAAGATTGGACTGCTGAAGGACTACGTTGAAGACGAGGAATCGAAGCTCA 1361
consensus_7833#3      ------------------------------------------------------------
consensus_7833#1      ------------------------------------------------------------
consensus_7833#2      ------------------------------------------------------------
consensus_7833#4      ------------------------------------------------------------
                                                                                  

consensus_7833#0      ATCAGTTCTACCAAGCTGGT 1381
consensus_7833#3      --------------------
consensus_7833#1      --------------------
consensus_7833#2      --------------------
consensus_7833#4      --------------------
                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)