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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7845#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1207 fasta sequence
[GCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACG-AGCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGATCGCCCCGCTCGAGGTCGTCATCCCGGCCCAGAACA-CCGGTCTCGGTCCGGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG-ACGACGACCCACGCCGACCGCATGCGCCAGCAGC-AGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTTTGTGAAACCAACTGAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAC]
[+] EMBL CNS09G8X [GCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACG AGCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGATCGCCCCGCTCGAGGTCGTCATCCCGGCCCAGAACA CCGGTCTCGGTCCGGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGG ]
[+] EMBL CNS09HTW [ TCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAATCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGATCGCCCCGCTCGAGGTCGTCATCCCGGCCCAGAACA CCGGTCTCGGTCCGGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCACTGCCACGGCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACA CAAGAACGACGACCCACGCCGACCGCATGCGCCA CAGCAAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCG ]
[+] EMBL CNS09FCC [ AGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGATCGCCCCGCTCGAGGTCGTCATCCCGGCCCAGAACA CCGGTCTCGGTCCGGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAAT CTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTT CAGGC ]
[+] EMBL CNS08DUM [ ACCATGATGCGCAAGGCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACA CCGGTCTCGGTCCGGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGGCATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGTTTTTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACACAAAG ACGA ]
[-] EMBL CNS09HTX [ GCGGGCTTCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGCCGAGATCCGCGAAAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGATCGCCCCGCTCGAGGTCGTCATCCCGGCCCAGAACT CCGGTCTCGGTCCGGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTTTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTTTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGAGGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCACTGCCACGGCAACAAATGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGC AGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTTTGTGAAACCAACTGAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAG ]
[-] EMBL CNS08DUN [ AACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGCCGAGATCCGCGAAAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGAAC TTCCGCTCGAGGTCGTCATCCCGGCCCAGAACA CCGGTCTCGGTCCGGACAAGGTAAAAGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGGCATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTACGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCC ]
[-] EMBL CNS08Z3J [ GAGGTCGTCATCCCGGCCCAGAACACCCGGTTTTTTTCCGGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATTCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCATCCTTGCTTCCGTGTCGCTCCAGATCGGATACCCGAAGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACAACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGC AGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAC]
consensusID : consensus_7845#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 357 fasta sequence
[CCGCCCACGCGTCCGTTTTTTTTTTTTTTTTTTTTTAGTGTTTAAATTTAATTTAATTTAAATCTTTTTCTTTTCCGGTGCCTTCCTCTTCTTTCCCACCAAGGAATTAGGCACCGTGATGCGATCGCTAGGCCAGAACCCCACAGAAGCTGAATTGCAAGACATGATCAACGAAGTCGACGCGGACGGTAACGGCACGATCGATTTCCCCGAGTTTCTAACAATGATGGCTCGTAAAATGAAGGACACGGACAGTGAAGAGGAAATCCGGGAGGCATTCCGAGTCTTCGACAAGGACGGCAACGGTTTTATCTCTGCAGCTGAGCTGCGCCACGTCATGACTAATCTGGGCGAGAA]
[+] EMBL BM604111 [CCGCCCACGCGTCCGTTTTTTTTTTTTTTTTTTTTTAGTGTTTAAATTTAATTTAATTTAAATCTTTTTCTTTTCCGGTGCCTTCCTCTTCTTTCCCACCAAGGAATTAGGCACCGTGATGCGATCGCTAGGCCAGAACCCCACAGAAGCTGAATTGCAAGACATGATCAACGAAGTCGACGCGGACGGTAACGGCACGATCGATTTCCCCGAGTTTCTAACAATGATGGCTCGTAAAATGAAGGACACGGACAGTGAAGAGGAAATCCGGGAGGCATTCCGAGTCTTCGACAAGGACGGCAACGGTTTTATCTCTGCAGCTGAGCTGCGCCACGTCATGACTAATCTGGGCGAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7845#0 GCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAGCCCTA 60
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 TTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAA 120
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 AGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGG 180
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGG 240
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGA 300
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 GAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCGATCTGGC 360
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGAT 420
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CGCCCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGACAAGGTCGG 480
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCA 540
consensus_7845#1 ----------------CCGCCCACGCGTCCGTTTTTTTTTTTTTTTTTTTTTAGTGTTTA 44
* ** ** * * * * ** * * ** * *
consensus_7845#0 GATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGC 600
consensus_7845#1 AATTTAAT-----TTAATTTAAATCTTTTTCTTTTCCGGTGCCTTCCTCTTCTTTCCCAC 99
** * * ** ** **** ** * ***** * * *
consensus_7845#0 GGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCA 660
consensus_7845#1 CAAGGAATTAGGCACCGTGATGCGATCGCTAGGCCAGAACCCCACAGAAGCTGAATTGCA 159
**** * ** ** * * * * ** * **** * * * * **
consensus_7845#0 GATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCT 720
consensus_7845#1 AGAC--ATGATCAACGAAGTCGACGCGGACG-GTAACGGCACGATCGATTTCCCCGAGTT 216
* ** * *** * * ** * ** * * * * ** ***** * * *
consensus_7845#0 GCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTT 780
consensus_7845#1 TCTAACAATGATGGCTCGTA---AAATGAAGGACACGGACAGTGAAG-----AGGAAATC 268
** * ** ** * * * ** ** *** *** * * * *
consensus_7845#0 CATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGCTGCCGCCCC 840
consensus_7845#1 CGGGAGGCATTC---CGAGTCTTCGACAAGGACGGCAACGGTTTTATCT-CTGCAGCTG- 323
* * * ** * * *** * * ********* * ** **** **
consensus_7845#0 AGCTGC-CAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATA 899
consensus_7845#1 AGCTGCGCCACGTCATGACTAATCTGGGCGAGAA-------------------------- 357
****** * * * * ** ** ***
consensus_7845#0 TGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAGACGACGACCCACGCCGACCGCATG 959
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGG 1019
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACA 1079
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTTTGTGAAACCAACTGAAG 1139
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 AGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAAT 1199
consensus_7845#1 ------------------------------------------------------------
consensus_7845#0 CCGGAAAC 1207
consensus_7845#1 --------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||