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Anopheles gambiae
cluster # 7892 cluster # 7892       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7892#0 length = 1167 sequences # 4  
consensus_7892#1 length = 767 sequences # 1  
consensus_7892#2 length = 623 sequences # 1  
consensus_7892#3 length = 561 sequences # 1  
consensus_7892#4 length = 549 sequences # 1  

consensusID : consensus_7892#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1167
fasta sequence
                              [CAGATNGCCCCGAGGTTTACGAGGGGAAGCACAACGACCNGGTGGTGATCTCCGTATATCGATGGCACGATCACCAAGTCGGACGTTCTCGGTCACATTCTGCCAATGGTCGGCAAATCCTGGGACCAGATACGGTGTGGCGCAGCTGTTCTACGAAGATACGAGGAGAATGGGTACAAAATGCTGTACCTGTCGGCCGTGCCATCGGGCAGGCGAAGACGACCCGCGGCTATACTGAGTCGATACCGCCA-GGTGATGTGAAGCTGCCAGACGGGCCGCTGCTGCT-CAAT-CCGACCTCCCTCATGT-CGGCGTTCCATCGCGAGGT-GATCGAGAAGAA-GCCGGAGCAGTTCAAA-ATCGCCTGT-CTGAATGACAT-CCGCGACCTGT-TCCCCGAAC-GGAACCCATTCTACGCCGGATACGGTAACAGAATTAATGA-TGTTTGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCACCATCAACCCGA-AGGGA-GAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCTACGCCAACATGGCATACATCG-TGGACCAG-CTGTACCCG-CCGATCAAGCACATCGAAGAGGAAGACAATGAGTACACCAG-CT-T-CAACTACT-GGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCACCACCACTACCTACCCAGCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAACCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCACAGACATAACCAAATCCCTCAATCGGTACCGCCAATATGTGGGGAATGAAATGACAACACAAAAGAACTACAGGAAAAGACGATTACAACCACACATCTTCCTACAACCCCAACAGAAGTAATAGACACAGTAATAGACAAGGACAGAGAAGAAAAGAAAGAACAAGCTAAGCTAAGAAAGAAACCAATGATTGGTACAATAATACTAATAATAATAATAGTAATTGATAATTATAATAATATTCATACACAAGTTTACCCCGTAAGCTTTTGAACGCGAGTGCGCTTTGAAGTGGTCATGGTCTCTTCTG]

[+] EMBL AL693229             [CAGATNGCCCCGAGGTTTACGAGGGGAAGCACAACGACCNGGTGGTGATCTCCGTATATCGATGGCACGATCACCAAGTCGGACGTTCTCGGTCACATTCTGCCAATGGTCGGCAAATCCTGGGACCAGATACGGTGTGGCGCAGCTGTTCTACGAAGATACGAGGAGAATGGGTACAAAATGCTGTACCTGTCGGCCGTGCCATCGGGCAGGCGAAGACGACCCGCGGCTATACTGAGTCGATACCGCCA GGTGATGTGAAGCTGCCAGACGGGCCGCTGCTGCTACAATACCGA CTCCCTCATGTACGGCGTTCCATCGCGAGGTAGATCGAGAAGAACGCCGGAGCAGTTCAAACATCGCCTGTACTGAATGACATACCGCGACCTGTATCCCCGAACTGGAACCCATTCTACGCCGGATACGGTAACAGAATTNATGACTGTTTGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCACCATCAACCCGACAGGGACGAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCTACGCCAACATGGCATACATCGCTGGACCAGTGTATACCCGACCGATCAAGCACATCAAAGAGGAAGACAATGAGTACACCAGACTNTACAA TACTAGGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGA ATATCCGGTTCCTCGTTGTnca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM609642             [                                                                                                                                                                                                                                        ccggcAGTCGAT CCGCCAGGGTGATGTGAAGCTGCCAGACGGGCCGCTTCTGCT CAAT CCGACCTCCCTCATGT CGGCGTTCCATCGCGAGGT GATCGAGAAGAA GCCGGAGCAGTTCAAA ATCGCCTGT CTGAATGACAT CCGCGACCTGT TCCCCGAGC GGAACCCGTTCTACGCCGGATACGGTAACAGAATTAATGA TGTTTGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCACCATCAACCCGA AGGGA GAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCTACGCCAACATGGCATACATCG TGGACCAG CTGTACCCG CCGATCAAGCACATCGAAGAGGAAGACAATGAGTACACCAG CT T CAACTACT GGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCACCACCACTACCTACCCAGCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAACCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCACAGACATAACCAAATCCCTCAATCGGTACCGCCAATATGTGGGGAATGAAATGACAACACAAAAGAACTACA                                                                                                                                                                                                                                               ]
[+] EMBL BX617198             [                                                                                                                                                                                                                                                                           CCAGACGGGCCGCTGCTGCT CAAT CCGACCTCCCTCATGT CGGCGTTCCATCGCGAGGT GATCGAGAAGAA GCCGGAGCAGTTCAAA ATCGCCTGT CTGAATGACAT CCGCGACCTGT TCCCCGAAC GGAACCCATTCTACGCCGGATACGGTAACAGAATTAATGA TGTTTGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCACCATCAACCCGA AGGGA GAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCTACGCCAACATGGCATACATCG TGGACCAG CTGTACCCG CCGATCAAGCACATCGAAGAGGAAGACAATGAGTACACCAG CT T CAACTACT GGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCACCACCACTATCTACCCAGCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAACCACCA                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM629470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgCACCATCAACCCGA AGGGA GAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCTACGCCAACATGGCATACATCG TGGACCAG CTGTACCCG CCGATCAAGCACATCGAAGAGGAAGACAATGAGTACACCAG CT T CAACTACT GGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCACCACCACTACCTACCCAGCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAACCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCACAGACATAACCAAATCCCTCAATCGGTACCGCCAATATGTGGGGAATGAAATGACAACACAAAAGAACTACAGGAAAAGACGATTACAACCACACATCTTCCTACAACCCCAACAGAAGTAATAGACACAGTAATAGACAAGGACAGAGAAGAAAAGAAAGAACAAGCTAAGCTAAGAAAGAAACCAATGATTGGTACAATAATACTAATAATAATAATAGTAATTGATAATTATAATAATATTCATACACAAGTTTACCCCGTAAGCTTTTGAACGCGAGTGCGCTTTGAAGTGGTCATGGTCTCTTCTG]


>consensus_7892#0 CAGATNGCCCCGAGGTTTACGAGGGGAAGCACAACGACCNGGTGGTGATCTCCGTATATC GATGGCACGATCACCAAGTCGGACGTTCTCGGTCACATTCTGCCAATGGTCGGCAAATCC TGGGACCAGATACGGTGTGGCGCAGCTGTTCTACGAAGATACGAGGAGAATGGGTACAAA ATGCTGTACCTGTCGGCCGTGCCATCGGGCAGGCGAAGACGACCCGCGGCTATACTGAGT CGATACCGCCAGGTGATGTGAAGCTGCCAGACGGGCCGCTGCTGCTCAATCCGACCTCCC TCATGTCGGCGTTCCATCGCGAGGTGATCGAGAAGAAGCCGGAGCAGTTCAAAATCGCCT GTCTGAATGACATCCGCGACCTGTTCCCCGAACGGAACCCATTCTACGCCGGATACGGTA ACAGAATTAATGATGTTTGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCA CCATCAACCCGAAGGGAGAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCTACG CCAACATGGCATACATCGTGGACCAGCTGTACCCGCCGATCAAGCACATCGAAGAGGAAG ACAATGAGTACACCAGCTTCAACTACTGGCGCGAGCCGGTTCCCGAGATTGACTTCAATG CTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCA CCACCACTACCTACCCAGCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTC AGCAAGCATTGCCAACCATTCCCGAGAACTGAACCACCACCACCACCAGTGGAGACGGAG AAGAGCGAGACCAGCACAGACATAACCAAATCCCTCAATCGGTACCGCCAATATGTGGGG AATGAAATGACAACACAAAAGAACTACAGGAAAAGACGATTACAACCACACATCTTCCTA CAACCCCAACAGAAGTAATAGACACAGTAATAGACAAGGACAGAGAAGAAAAGAAAGAAC AAGCTAAGCTAAGAAAGAAACCAATGATTGGTACAATAATACTAATAATAATAATAGTAA TTGATAATTATAATAATATTCATACACAAGTTTACCCCGTAAGCTTTTGAACGCGAGTGC GCTTTGAAGTGGTCATGGTCTCTTCTG



consensusID : consensus_7892#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 767
fasta sequence
                              [GAATCCCCCGAGGTTAAACGACAGGTGGTGATCTCCGATATCGATGGCACGATCACCAAGTCGGACGTTCTCGGTCACATTCTGCCAATGGTAGGCAAATCCTGGTGACCAGATCGGTGTGGCGCAGCTGTTCTCGAAGATCTGAGGAGAATGGGTACAAAATGCTGTACCTGTCGGCCCTGTGCCATCGGGCAGTGCGAAGACGACCCGCGGCTATCTTGCAGTCGATCCGCCAGGGTGATGTGAATGCTGCCAGACGGGCCTGCTTCTGCTCAATCCGACCTCCCTCATGTCGGCGTTCCATCGCGAGTGATCGAGAAGAAGCCGGAGCAGTTCAAAATCGCCTGTCTGAATGACATCCGCGACCTGTTCCCCGAGCGGAACCCGTTCTACGCCGGATACGGTAACAGAATTAATGATGTATATAGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCACCATCAACCCGAAGGGAGAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCATATTCTTANGCGAGTTCATTATCTACTTANTTTANAAACAGCTCCTAACAGTACACTACTCTAAAGTCNATTCCGCCTTAGAGGAACTGTCCTCACGAGCNCGCCACGAGATGTGTGAAGCGGTTGAAACCCGCGAACGNACGNAATGCCTTAGACGGCACGCAACCGGGNAGCCACGACACCACGNCGANTCGGACANTCNCAAGAACTGGGGNTGNGTNNCCCNGCACAAGCANNAANC]

[+] EMBL AL934755             [GAATCCCCCGAGGTTAAACGACAGGTGGTGATCTCCGATATCGATGGCACGATCACCAAGTCGGACGTTCTCGGTCACATTCTGCCAATGGTAGGCAAATCCTGGTGACCAGATCGGTGTGGCGCAGCTGTTCTCGAAGATCTGAGGAGAATGGGTACAAAATGCTGTACCTGTCGGCCCTGTGCCATCGGGCAGTGCGAAGACGACCCGCGGCTATCTTGCAGTCGATCCGCCAGGGTGATGTGAATGCTGCCAGACGGGCCTGCTTCTGCTCAATCCGACCTCCCTCATGTCGGCGTTCCATCGCGAGTGATCGAGAAGAAGCCGGAGCAGTTCAAAATCGCCTGTCTGAATGACATCCGCGACCTGTTCCCCGAGCGGAACCCGTTCTACGCCGGATACGGTAACAGAATTAATGATGTATATAGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCACCATCAACCCGAAGGGAGAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCATATTCTTANGCGAGTTCATTATCTACTTANTTTANAAACAGCTCCTAACAGTACACTACTCTAAAGTCNATTCCGCCTTAGAGGAACTGTCCTCACGAGCNCGCCACGAGATGTGTGAAGCGGTTGAAACCCGCGAACGNACGNAATGCCTTAGACGGCACGCAACCGGGNAGCCACGACACCACGNCGANTCGGACANTCNCAAGAACTGGGGNTGNGTNNCCCNGCACAAGCANNAANC]


>consensus_7892#1 GAATCCCCCGAGGTTAAACGACAGGTGGTGATCTCCGATATCGATGGCACGATCACCAAG TCGGACGTTCTCGGTCACATTCTGCCAATGGTAGGCAAATCCTGGTGACCAGATCGGTGT GGCGCAGCTGTTCTCGAAGATCTGAGGAGAATGGGTACAAAATGCTGTACCTGTCGGCCC TGTGCCATCGGGCAGTGCGAAGACGACCCGCGGCTATCTTGCAGTCGATCCGCCAGGGTG ATGTGAATGCTGCCAGACGGGCCTGCTTCTGCTCAATCCGACCTCCCTCATGTCGGCGTT CCATCGCGAGTGATCGAGAAGAAGCCGGAGCAGTTCAAAATCGCCTGTCTGAATGACATC CGCGACCTGTTCCCCGAGCGGAACCCGTTCTACGCCGGATACGGTAACAGAATTAATGAT GTATATAGGGCGTACCGGGCCGTTGGTATTCCGACGTCGAGAATCTTCACCATCAACCCG AAGGGAGAGCTAAAGCACGAGCTGACGCAAACATTCCAATCGACCATATTCTTANGCGAG TTCATTATCTACTTANTTTANAAACAGCTCCTAACAGTACACTACTCTAAAGTCNATTCC GCCTTAGAGGAACTGTCCTCACGAGCNCGCCACGAGATGTGTGAAGCGGTTGAAACCCGC GAACGNACGNAATGCCTTAGACGGCACGCAACCGGGNAGCCACGACACCACGNCGANTCG GACANTCNCAAGAACTGGGGNTGNGTNNCCCNGCACAAGCANNAANC



consensusID : consensus_7892#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 623
fasta sequence
                              [CCGGAGCAATCGCTGCAACAGCAAACGCAGCCGCAACCAATTCAGCAACCGCAGCCTGCTGGCGGCAGTTGGTGGCGCTGGCGTCGGTCGAATGAGTCGAAGCCGCCGGCACCGGCCGGTACGCCGCAGACGCCCATCACACCGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGACATGAAGACGTCCGCCGCAGTGGGCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAAAGCCACGAAGGAGGCATGGACGCGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAGGACGGCTACAATGGGTCGCTGTCGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCATGTCGGCAGGTGGCATGCTGATCGACAACAGCAGCGAGAAGACGCTGTTCCTGCTCGGTTGCGGCGAAAAGTACCGGAAAACGCTGCGCCTGTCGTCGGAGCGCATCAAGGAGCTGAACCTGCTGGATGGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGCTGCAAGTGCTATCTGTTCAAGTGGAAGCACAACGACCAAGGTGGTGATCTCCGATATCGATGGCACGATCACCCAAGTCGGAC]

[+] EMBL BM596184             [CCGGAGCAATCGCTGCAACAGCAAACGCAGCCGCAACCAATTCAGCAACCGCAGCCTGCTGGCGGCAGTTGGTGGCGCTGGCGTCGGTCGAATGAGTCGAAGCCGCCGGCACCGGCCGGTACGCCGCAGACGCCCATCACACCGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGACATGAAGACGTCCGCCGCAGTGGGCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAAAGCCACGAAGGAGGCATGGACGCGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAGGACGGCTACAATGGGTCGCTGTCGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCATGTCGGCAGGTGGCATGCTGATCGACAACAGCAGCGAGAAGACGCTGTTCCTGCTCGGTTGCGGCGAAAAGTACCGGAAAACGCTGCGCCTGTCGTCGGAGCGCATCAAGGAGCTGAACCTGCTGGATGGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGCTGCAAGTGCTATCTGTTCAAGTGGAAGCACAACGACCAAGGTGGTGATCTCCGATATCGATGGCACGATCACCCAAGTCGGAC]


>consensus_7892#2 CCGGAGCAATCGCTGCAACAGCAAACGCAGCCGCAACCAATTCAGCAACCGCAGCCTGCT GGCGGCAGTTGGTGGCGCTGGCGTCGGTCGAATGAGTCGAAGCCGCCGGCACCGGCCGGT ACGCCGCAGACGCCCATCACACCGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGAC ATGAAGACGTCCGCCGCAGTGGGCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAA AGCCACGAAGGAGGCATGGACGCGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAG GACGGCTACAATGGGTCGCTGTCGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCATG TCGGCAGGTGGCATGCTGATCGACAACAGCAGCGAGAAGACGCTGTTCCTGCTCGGTTGC GGCGAAAAGTACCGGAAAACGCTGCGCCTGTCGTCGGAGCGCATCAAGGAGCTGAACCTG CTGGATGGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGC TGCAAGTGCTATCTGTTCAAGTGGAAGCACAACGACCAAGGTGGTGATCTCCGATATCGA TGGCACGATCACCCAAGTCGGAC



consensusID : consensus_7892#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 561
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGAATGAGTCGAAGCCGCCGGCACCGGCCGGTACGCCGCAGACGCCCATCACACCGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGACATGAAGACGTCCGCCGCAGTGGGCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAAAGCCACGAAGGAGGCATGGACGCGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAGGACGGCTACAATGGGTCGCTGTCGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCATGTCGGCAGGTGGCATGCTGATCGACAACAGCAGCGAGAAGACGCTGTTCCTGCTCGGTTGCGGCGAAAAGTACCGGAAAACGCTGCGCCTGTCGTCGGAGCGCATCAAGGAGCTGAACCTGCTGGATGGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGCTGCAAGTGCTATCTGTTCAAGTGGAAGCACAACGACAAGGTGGTGATCTCCGATATCGATGGCACGATCACCAAGTCGGACG]

[+] EMBL BM608480             [CCGCCCACGCGTCCGCCCACGCGTCCGCGAATGAGTCGAAGCCGCCGGCACCGGCCGGTACGCCGCAGACGCCCATCACACCGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGACATGAAGACGTCCGCCGCAGTGGGCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAAAGCCACGAAGGAGGCATGGACGCGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAGGACGGCTACAATGGGTCGCTGTCGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCATGTCGGCAGGTGGCATGCTGATCGACAACAGCAGCGAGAAGACGCTGTTCCTGCTCGGTTGCGGCGAAAAGTACCGGAAAACGCTGCGCCTGTCGTCGGAGCGCATCAAGGAGCTGAACCTGCTGGATGGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGCTGCAAGTGCTATCTGTTCAAGTGGAAGCACAACGACAAGGTGGTGATCTCCGATATCGATGGCACGATCACCAAGTCGGACG]


>consensus_7892#3 CCGCCCACGCGTCCGCCCACGCGTCCGCGAATGAGTCGAAGCCGCCGGCACCGGCCGGTA CGCCGCAGACGCCCATCACACCGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGACA TGAAGACGTCCGCCGCAGTGGGCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAAA GCCACGAAGGAGGCATGGACGCGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAGG ACGGCTACAATGGGTCGCTGTCGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCATGT CGGCAGGTGGCATGCTGATCGACAACAGCAGCGAGAAGACGCTGTTCCTGCTCGGTTGCG GCGAAAAGTACCGGAAAACGCTGCGCCTGTCGTCGGAGCGCATCAAGGAGCTGAACCTGC TGGATGGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGCT GCAAGTGCTATCTGTTCAAGTGGAAGCACAACGACAAGGTGGTGATCTCCGATATCGATG GCACGATCACCAAGTCGGACG



consensusID : consensus_7892#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 549
fasta sequence
                              [CCGGATCCATACACAAACAATTCCGTCCCCATTCCGTTCAACACGGGAATGTGAATATGGTTTGCTAGTCAGAGGGCATGAAACAGTGGTGCCAGTCAAAATGATCATCACCAAACCCACCCCCTCCCTCAGTTGGTCGATCTGCACGCCGGCACTTCATAAGAACTTCTAGTGTAGAGAGCTTTCAGCAAACCATTCCGGACATCGAAACCACCGGGCTACGCCAACATGGCATACATCGTGGACCAGCTGTACCCGCCGATCAAGCACATCGAAGAGGAAGACAATGAGTACACCAGCTTCAACTACTGGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCACCACCACTACCTACCCAGCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAACCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCACAGACATAAC]

[+] EMBL BM599730             [CCGGATCCATACACAAACAATTCCGTCCCCATTCCGTTCAACACGGGAATGTGAATATGGTTTGCTAGTCAGAGGGCATGAAACAGTGGTGCCAGTCAAAATGATCATCACCAAACCCACCCCCTCCCTCAGTTGGTCGATCTGCACGCCGGCACTTCATAAGAACTTCTAGTGTAGAGAGCTTTCAGCAAACCATTCCGGACATCGAAACCACCGGGCTACGCCAACATGGCATACATCGTGGACCAGCTGTACCCGCCGATCAAGCACATCGAAGAGGAAGACAATGAGTACACCAGCTTCAACTACTGGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCACCACCACTACCTACCCAGCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAACCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCACAGACATAAC]


>consensus_7892#4 CCGGATCCATACACAAACAATTCCGTCCCCATTCCGTTCAACACGGGAATGTGAATATGG TTTGCTAGTCAGAGGGCATGAAACAGTGGTGCCAGTCAAAATGATCATCACCAAACCCAC CCCCTCCCTCAGTTGGTCGATCTGCACGCCGGCACTTCATAAGAACTTCTAGTGTAGAGA GCTTTCAGCAAACCATTCCGGACATCGAAACCACCGGGCTACGCCAACATGGCATACATC GTGGACCAGCTGTACCCGCCGATCAAGCACATCGAAGAGGAAGACAATGAGTACACCAGC TTCAACTACTGGCGCGAGCCGGTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGT TCCTCGTTGTCATCGTCGGGTGCTGCAGCTGCTTCCGCCACCACCACCACTACCTACCCA GCACCTAACGGCGGCAAGATCACCCCGACGGCAACGCTGATTCAGCAAGCATTGCCAACC ATTCCCGAGAACTGAACCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCAC AGACATAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7892#0      CAGATNGCCCCGAGGTTTACGAGGGGAAGCACAACGACCNGGTGGTGATCTCCGTATATC 60
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      -----------------GAATCCCCCGAGGTTAAACGACAGGTGGTGATCTCCG-ATATC 42
consensus_7892#2      ------------------------------------------------------------
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      GATGGCACGATCACCAAGTCGGACGTTCTCGGTCACATTCTGCCAATGGTCGGCAAATCC 120
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      GATGGCACGATCACCAAGTCGGACGTTCTCGGTCACATTCTGCCAATGGTAGGCAAATCC 102
consensus_7892#2      ------------------------------------------------------------
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      TGGGACCAGATACGGTGTGGCGCAGCTGTTCTACGAAGATACGAGGAGAATGGGTACAAA 180
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      TGGTGACCAGATCGGTGTGGCGCAGCTGTTCT-CGAAGATCTGAGGAGAATGGGTACAAA 161
consensus_7892#2      ------------------------------------------------------------
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      ATGCTGTACCTGTCGGCC--GTGCCATCGGGCAG-GCGAAGACGACCCGCGGCTATACTG 237
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      ATGCTGTACCTGTCGGCCCTGTGCCATCGGGCAGTGCGAAGACGACCCGCGGCTATCTTG 221
consensus_7892#2      -------------------------------------CCGGAGCAATCGCTGCAACAGCA 23
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      -AGTCGATACCGCCAGGTGATGTGAA-GCTGCCAGACGGGCC-GCTGCTGCTCAATCCGA 294
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      CAGTCGATCCGCCAGGGTGATGTGAATGCTGCCAGACGGGCCTGCTTCTGCTCAATCCGA 281
consensus_7892#2      AACGCAGCCGCAACCAATTCAGCAACCGCAGCCTGCTGGCGGCAGTTGGTGGCGCTGGCG 83
consensus_7892#3      -----------------------------------CCGCCCACG--CGTCCGCCCACGCG 23
                                                                                  

consensus_7892#0      CCTCCCTCATGTCGGCGTTCCATCGCGAGGTGATCGAGAAGAAGCCGGAGCAGTTCAAAA 354
consensus_7892#4      ----------------------------CCGGATCCATACACAAACAATTCCGTCCCCAT 32
consensus_7892#1      CCTCCCTCATGTCGGCGTTCCATCGCGAGT-GATCGAGAAGAAGCCGGAGCAGTTCAAAA 340
consensus_7892#2      TCGGTCGAATGAGTCGAAGCCGCCGGCACC-GGCCGGTACGCCGCAGACGCCCATCACAC 142
consensus_7892#3      TCCG-CGAATGAGTCGAAGCCGCCGGCACC-GGCCGGTACGCCGCAGACGCCCATCACAC 81
                                                     *  *   *           *    *  * 

consensus_7892#0      T--CGCCTGTCTGAATGACATCCGCGACCTGTTCCCCGAACGGAACCCATTCTACGCCGG 412
consensus_7892#4      T--C-CGTTCAACACGGGAATGTGAATATGGTTTGCTAGTCAGAGGGCATGAAACAGTGG 89
consensus_7892#1      T--CGCCTGTCTGAATGACATCCGCGACCTGTTCCCCGAGCGGAACCCGTTCTACGCCGG 398
consensus_7892#2      CGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGACATGAAGACGTCCGCCGCAGTGG 202
consensus_7892#3      CGACGGCAGCGGCGGAGGAGTCGCCCGATGGTTTGGACATGAAGACGTCCGCCGCAGTGG 141
                         *            *   *         ***                     *   **

consensus_7892#0      ATACGGTAACAGAATTAATGAT--G-TTTGGGCGTA----CCGGGCCGTTGGT---ATTC 462
consensus_7892#4      TGCCAGTCAAAATGATCATCACCAA-ACCCACCCCC----TCCCTCAGTTGGTC-GATCT 143
consensus_7892#1      ATACGGTAACAGAATTAATGATGTATATAGGGCGTA----CCGGGCCGTTGGT---ATTC 451
consensus_7892#2      GCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAAAGCCACGAAGGAGGCATGGACG 262
consensus_7892#3      GCACGCAAACGTCGCGTTCGAACTCGCCCGACGACGAAAGCCACGAAGGAGGCATGGACG 201
                         *    *           *                    *     *  **        

consensus_7892#0      CGACGTCGAGAATCTTCACCATCAACCCGAAGGGAGAGCTAAAGCACGAGCTGACGCAAA 522
consensus_7892#4      GCACGCCGGCACTTCATAAGAACTTCTAGTGTAGAGAGCTTTCA-GCAAACCATTCCGGA 202
consensus_7892#1      CGACGTCGAGAATCTTCACCATCAACCCGAAGGGAGAGCTAAAGCACGAGCTGACGCAAA 511
consensus_7892#2      CGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAGGACGGCTACAATGGGTCGCTGT 322
consensus_7892#3      CGACGGTGCCGACGTACAAGAACGCATCGAAAACGGAGGACGGCTACAATGGGTCGCTGT 261
                        ***  *         *  * *     *      ***        * *       *   

consensus_7892#0      CATTCCAATCGAC---CTACGCCAACATGGCATACATCGTGGACCAGCTGTACCCGCCGA 579
consensus_7892#4      CATCGAAACCACCGGGCTACGCCAACATGGCATACATCGTGGACCAGCTGTACCCGCCGA 262
consensus_7892#1      CATTCCAATCGACCA--TATTCTTANGCGA-GTTCATTATCTACTTANTTTA-------- 560
consensus_7892#2      CGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCAT-GTCGGCAGGTGGCAT--GCTGA 379
consensus_7892#3      CGTCGGAGGATTCCGAGCTGGCGATGGAGAAATCCAT-GTCGGCAGGTGGCAT--GCTGA 318
                      * *   *     *        *      *   * ***  *   *       *        

consensus_7892#0      TCAAGCACATCGAAGAGGA-AGACAATGAGTACACCAGCTTCAACTACTGGCGCGAGCCG 638
consensus_7892#4      TCAAGCACATCGAAGAGGA-AGACAATGAGTACACCAGCTTCAACTACTGGCGCGAGCCG 321
consensus_7892#1      -NAAACAGCTCCTAACAGT-ACACTACTCTAAAGTCNATTCCGCCT--TAGAG-GAACTG 615
consensus_7892#2      TCGACAACAGCAGCGAGAAGACGCTGTTCCTGC-TCGGTTGCGGCGAAAAGTACCGGAAA 438
consensus_7892#3      TCGACAACAGCAGCGAGAAGACGCTGTTCCTGC-TCGGTTGCGGCGAAAAGTACCGGAAA 377
                         *  *   *         *  *           *   * *  *     *         

consensus_7892#0      GTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGT 698
consensus_7892#4      GTTCCCGAGATTGACTTCAATGCTTGTGACATATCCGGTTCCTCGTTGTCATCGTCGGGT 381
consensus_7892#1      TCCTCACGAGCNCGCCACGAGATGTGTGAAGCG-----------GTTGAAACCCGCGAAC 664
consensus_7892#2      ACGCT-GCGCCTGTCGTCGGAGCGCATCAAGGA-----------GCTGAACCTGCTGGAT 486
consensus_7892#3      ACGCT-GCGCCTGTCGTCGGAGCGCATCAAGGA-----------GCTGAACCTGCTGGAT 425
                                    *  *        * *               * **        *   

consensus_7892#0      GCTGCAGCTGCTTCCGC---CACCACCACCACTACCTACCCAGCACCTAACGGCGGCAAG 755
consensus_7892#4      GCTGCAGCTGCTTCCGC---CACCACCACCACTACCTACCCAGCACCTAACGGCGGCAAG 438
consensus_7892#1      GNACGNAATGCCTTAGA---CGGCAC-GCAACCGGGNAGCCACGACACCACGNCGANTCG 720
consensus_7892#2      GGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGCTGCAAG 546
consensus_7892#3      GGTATGAACGAGATCGAGTTCAGCGTGACGACTGCCTACCAGGGAACGACCCGCTGCAAG 485
                      *        *     *    *  *    * **     * *    *     *  *     *

consensus_7892#0      ATCACCCCGACGG--CAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAA 813
consensus_7892#4      ATCACCCCGACGG--CAACGCTGATTCAGCAAGCATTGCCAACCATTCCCGAGAACTGAA 496
consensus_7892#1      GACANTCNCAAGAACTGGGGNTGNGTNNCCCNGCACAAGCANNAANC------------- 767
consensus_7892#2      TGCTATCTGTTCA---AGTGGAAGCACAACGACCA-AGGTGGTGATCTCCGATATCGATG 602
consensus_7892#3      TGCTATCTGTTCA---AGTGGAAGCACAACGAC-A-AGGTGGTGATCTCCGATATCGATG 540
                        *   *            *         *    *         *               

consensus_7892#0      CCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCACAGACATAACCAAATCC 873
consensus_7892#4      CCACCACCACCACCAGTGGAGACGGAGAAGAGCGAGACCAGCACAGACATAAC------- 549
consensus_7892#1      ------------------------------------------------------------
consensus_7892#2      GCACGATCACCCAAGTCGGAC--------------------------------------- 623
consensus_7892#3      GCACGATCACC-AAGTCGGACG-------------------------------------- 561
                                                                                  

consensus_7892#0      CTCAATCGGTACCGCCAATATGTGGGGAATGAAATGACAACACAAAAGAACTACAGGAAA 933
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      ------------------------------------------------------------
consensus_7892#2      ------------------------------------------------------------
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      AGACGATTACAACCACACATCTTCCTACAACCCCAACAGAAGTAATAGACACAGTAATAG 993
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      ------------------------------------------------------------
consensus_7892#2      ------------------------------------------------------------
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      ACAAGGACAGAGAAGAAAAGAAAGAACAAGCTAAGCTAAGAAAGAAACCAATGATTGGTA 1053
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      ------------------------------------------------------------
consensus_7892#2      ------------------------------------------------------------
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      CAATAATACTAATAATAATAATAGTAATTGATAATTATAATAATATTCATACACAAGTTT 1113
consensus_7892#4      ------------------------------------------------------------
consensus_7892#1      ------------------------------------------------------------
consensus_7892#2      ------------------------------------------------------------
consensus_7892#3      ------------------------------------------------------------
                                                                                  

consensus_7892#0      ACCCCGTAAGCTTTTGAACGCGAGTGCGCTTTGAAGTGGTCATGGTCTCTTCTG 1167
consensus_7892#4      ------------------------------------------------------
consensus_7892#1      ------------------------------------------------------
consensus_7892#2      ------------------------------------------------------
consensus_7892#3      ------------------------------------------------------
                                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)