cluster # 7933

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Anopheles gambiae
cluster # 7933 cluster # 7933 Sequences # 8 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7933#0 length = 1163 sequences # 2
consensus_7933#1 length = 1036 sequences # 2

consensus_7933#2 length = 706 sequences # 2
consensus_7933#3 length = 659 sequences # 1
consensus_7933#4 length = 658 sequences # 1

consensusID : consensus_7933#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1163
fasta sequence

                              [CCGGGCCCGGTAGGGCGATCGGAAAAATCGAACCGAAAGCGTGCGTGCGCGTATGTCCATCCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGCCACGCCGGATAACGCATCGCGTGAAACACACACACACACACCAAAGCGCAGTGAATCGTTTGCCTACCGTCTTCTCCATTCCGTTTCCCATTCCGGATGCAGAACGGCTGCACACACTGCTTATGATCGGTTGCATGCACGAAGCGAACGACGCGCCGTGTCCTACATGCGGCACCTACTTACTTAACCCACTCAGTAAGTCAGCAGTGTCGGGCACATCGTCGTCCTCGTCGTCGGAGGACGAATCCACCACGATGGACGATAGCAACACCACGTTCGCGGGACCGTCCGCCCGTTCCTCCTACCCGACGGCCAGCACACCCGCCCAGGACTCGACGGCGAACAGCTCGGGCGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCTGGGCCGGCGCCGAGACAGCCTGAGCGGACTGAGCTCGACCAGCCAGCCGCTCGGCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTCGACGGGTAAGGTTTTTTTTTTTTGCCGAACGGCGGCTGGTGAACGACGCCATCGCGCGCTAATGATTCGCTTCCCCATTCGCCGCCGCAGGAAACTACACCTCCGGCATCGTCGCGGACGTGGTGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGCGCAACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGGACGTCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACGAGCCGGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGGCGGGCGCCCAGCACAACCACCCGCTGCCACTCGCGCCGATGCCCCTGTTCGGGGGCAACGTGCAGCAAGGCGTTGCTGCTGCAGCAGCTCCAGCAGCAAACA]

[+] EMBL BM647847             [CCGGGCCCGGTAGGGCGATCGGAAAAATCGAACCGAAAGCGTGCGTGCGCGTATGTCCATCCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGCCACGCCGGATAACGCATCGCGTGAAACACACACACACACACCAAAGCGCAGTGAATCGTTTGCCTACCGTCTTCTCCATTCCGTTTCCCATTCCGGATGCAGAACGGCTGCACACACTGCTTATGATCGGTTGCATGCACGAAGCGAACGACGCGCCGTGTCCTACATGCGGCACCTACTTACTTAACCCACTCAGTAAGTCAGCAGTGTCGGGCACATCGTCGTCCTCGTCGTCGGAGGACGAATCCACCACGATGGACGATAGCAACACCACGTTCGCGGGACCGTCCGCCCGTTCCTCCTACCCGACGGCCAGCACACCCGCCCAGGACTCGACGGCGAACAGCTCGGGCGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCTGGGCCGGCGCCGAGACAGCCTGAGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM642688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCTGGGCCGGCGCCGGGACAGCCTGAGCGGACTGAGCTCGACCAGCCAGCCGCTCGGCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTCGACGGGTAAGGTTTTTTTTTTTTGCCGAACGGCGGCTGGTGAACGACGCCATCGCGCGCTAATGATTCGCTTCCCCATTCGCCGCCGCAGGAAACTACACCTCCGGCATCGTCGCGGACGTGGTGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGCGCAACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGGACGTCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACGAGCCGGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGGCGGGCGCCCAGCACAACCACCCGCTGCCACTCGCGCCGATGCCCCTGTTCGGGGGCAACGTGCAGCAAGGCGTTGCTGCTGCAGCAGCTCCAGCAGCAAACA]




>consensus_7933#0
CCGGGCCCGGTAGGGCGATCGGAAAAATCGAACCGAAAGCGTGCGTGCGCGTATGTCCAT
CCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTC
GAAAGGCTCACATCTGTGCCACGCCGGATAACGCATCGCGTGAAACACACACACACACAC
CAAAGCGCAGTGAATCGTTTGCCTACCGTCTTCTCCATTCCGTTTCCCATTCCGGATGCA
GAACGGCTGCACACACTGCTTATGATCGGTTGCATGCACGAAGCGAACGACGCGCCGTGT
CCTACATGCGGCACCTACTTACTTAACCCACTCAGTAAGTCAGCAGTGTCGGGCACATCG
TCGTCCTCGTCGTCGGAGGACGAATCCACCACGATGGACGATAGCAACACCACGTTCGCG
GGACCGTCCGCCCGTTCCTCCTACCCGACGGCCAGCACACCCGCCCAGGACTCGACGGCG
AACAGCTCGGGCGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTC
ACCCGCAGCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGCAGAACCTG
CTGTCCGGGCTGGGCCGGCGCCGAGACAGCCTGAGCGGACTGAGCTCGACCAGCCAGCCG
CTCGGCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTCGACGGGTAAGGTTTTT
TTTTTTTGCCGAACGGCGGCTGGTGAACGACGCCATCGCGCGCTAATGATTCGCTTCCCC
ATTCGCCGCCGCAGGAAACTACACCTCCGGCATCGTCGCGGACGTGGTGCGGGAGATACG
CGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGCGCAACCTGCAGGAAAA
CCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGGACGTCGACACGATGCA
GAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACGAGCCGGGTGCTGCAGCT
GGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGGCGGGCGCCCAGCACAACCA
CCCGCTGCCACTCGCGCCGATGCCCCTGTTCGGGGGCAACGTGCAGCAAGGCGTTGCTGC
TGCAGCAGCTCCAGCAGCAAACA

consensusID : consensus_7933#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1036
fasta sequence

                              [AACCAGGCAGATGTGGGTCGACGCAAGTGAACAAGGAAGCAAACGCTGCTGACCCGCAAGTTTTACAATCCGACCAGTCCAAACCGCACCATCTGCTGCCAGGGTGTAGTGGTGTGGTGCGCTTTTAAGTGTCCTGTGTGTGTATGTGTGCGCGCGCGAACGTGCCTCTCGGTGTCCTTTTTGTGCACGTGTGTGCTGTATGTGCGGAGATTTTGTGCAACTTTTGAGAAAGCCGTAAATCGCGACGACACAACGACTGCAACCAGCCAAGCTAGCAGCAGCAACCACAACAACAACAACAACAAACACTCACCAAAACGAGACTACCAATCAAACCAATAACCAAATTCGCTCTCAACGCCCGGCAAAGATGGAGATGTTCGAGAAGGGAAGCGTCATCTACATTACGCGTAGCGATGGTCGGATCCACACGGCGATCGTGTCACGGTTCCACGAGGACACACGCTCCGTCACGGTGGAATGGTACGAGCGGGGCGAATCGAAAGGCAAAGAGATCGAGATCGACATGCTGCTCGAGCTGAACAGAACGATGCAGCTGCAGCCGCAGCTGCAGCAGGAGCTGCACCACCAGCAGCAACATCAGCACCAGCAGCACTACCAGCAGCAGCAGCAGCAGCACGAGCCGGAACCGAAACCGACGGCGGAAGAGGCGAAGCAGCGAAAGAAAACGCCCGCGCCCGCTAACCTAGCACGCAATCCAACGCAAGCGATCATCCGATACAACAACTATCTAGCCCAACGGGGCGATTCGGGCAAGGGCGCCAGCATCCCGGCACCGTCCAACTTCAATCGGGCCACCATTCTACACACCGGGCCGACGCAGCGCTCGGAACAGTCCGGTACTGGACGCACCACCAATGTTTCGTCCCGGATCCTTGGTAACAGCAACAACACTGGCCGTAGCACGATGATCAACAACCGCGCGGCCGAACAACCAGCGGAAACCAGAACGCAACCAAAGGCGCTGGGAAAAACGAGCGTCGCCACCGGCCAGCAGCAGACGACCGCACCGGCA]

[+] EMBL BX623477             [AACCAGGCAGATGTGGGTCGACGCAAGTGAACAAGGAAGCAAACGCTGCTGACCCGCAAGTTTTACAATCCGACCAGTCCAAACCGCACCATCTGCTGCCAGGGTGTAGTGGTGTGGTGCGCTTTTAAGTGTCCTGTGTGTGTATGTGTGCGCGCGCGAACGTGCCTCTCGGTGTCCTTTTTGTGCACGTGTGTGCTGTATGTGCGGAGATTTTGTGCAACTTTTGAGAAAGCCGTAAATCGCGACGACACAACGACTGCAACCAGCCAAGCTAGCAGCAGCAACCACAACAACAACAACAACAAACACTCACCAAAACGAGACTACCAATCAAACCAATAACCAAATTCGCTCTCAACGCCCGGCAAAGATGGAGATGTTCGAGAAGGGAAGCGTCATCTACATTACGCGTAGCGATGGTCGGATCCACACGGCGATCGTGTCACGGTTCCACGAGGACACACGCTCCGTCACGGTGGAATGGTACGAGCGGGGCGAATCGAAAGGCAAAGAGATCGAGATCGACATGCTGCTCGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM617624             [                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgCGGATCCACACGGCGATCGTGTCACGGTTCCACGAGGACACACGCTCCGTCACGGTGGAATGGTACGAGCGGGGCGAATCGAAAGGCAAAGAGATCGAGATCGACATGCTGCTCGAGCTGAACAGAACGATGCAGCTGCAGCCGCAGCTGCAGCAGGAGCTGCACCACCAGCAGCAACATCAGCACCAGCAGCACTACCAGCAGCAGCAGCAGCAGCACGAGCCGGAACCGAAACCGACGGCGGAAGAGGCGAAGCAGCGAAAGAAAACGCCCGCGCCCGCTAACCTAGCACGCAATCCAACGCAAGCGATCATCCGATACAACAACTATCTAGCCCAACGGGGCGATTCGGGCAAGGGCGCCAGCATCCCGGCACCGTCCAACTTCAATCGGGCCACCATTCTACACACCGGGCCGACGCAGCGCTCGGAACAGTCCGGTACTGGACGCACCACCAATGTTTCGTCCCGGATCCTTGGTAACAGCAACAACACTGGCCGTAGCACGATGATCAACAACCGCGCGGCCGAACAACCAGCGGAAACCAGAACGCAACCAAAGGCGCTGGGAAAAACGAGCGTCGCCACCGGCCAGCAGCAGACGACCGCACCGGCA]




>consensus_7933#1
AACCAGGCAGATGTGGGTCGACGCAAGTGAACAAGGAAGCAAACGCTGCTGACCCGCAAG
TTTTACAATCCGACCAGTCCAAACCGCACCATCTGCTGCCAGGGTGTAGTGGTGTGGTGC
GCTTTTAAGTGTCCTGTGTGTGTATGTGTGCGCGCGCGAACGTGCCTCTCGGTGTCCTTT
TTGTGCACGTGTGTGCTGTATGTGCGGAGATTTTGTGCAACTTTTGAGAAAGCCGTAAAT
CGCGACGACACAACGACTGCAACCAGCCAAGCTAGCAGCAGCAACCACAACAACAACAAC
AACAAACACTCACCAAAACGAGACTACCAATCAAACCAATAACCAAATTCGCTCTCAACG
CCCGGCAAAGATGGAGATGTTCGAGAAGGGAAGCGTCATCTACATTACGCGTAGCGATGG
TCGGATCCACACGGCGATCGTGTCACGGTTCCACGAGGACACACGCTCCGTCACGGTGGA
ATGGTACGAGCGGGGCGAATCGAAAGGCAAAGAGATCGAGATCGACATGCTGCTCGAGCT
GAACAGAACGATGCAGCTGCAGCCGCAGCTGCAGCAGGAGCTGCACCACCAGCAGCAACA
TCAGCACCAGCAGCACTACCAGCAGCAGCAGCAGCAGCACGAGCCGGAACCGAAACCGAC
GGCGGAAGAGGCGAAGCAGCGAAAGAAAACGCCCGCGCCCGCTAACCTAGCACGCAATCC
AACGCAAGCGATCATCCGATACAACAACTATCTAGCCCAACGGGGCGATTCGGGCAAGGG
CGCCAGCATCCCGGCACCGTCCAACTTCAATCGGGCCACCATTCTACACACCGGGCCGAC
GCAGCGCTCGGAACAGTCCGGTACTGGACGCACCACCAATGTTTCGTCCCGGATCCTTGG
TAACAGCAACAACACTGGCCGTAGCACGATGATCAACAACCGCGCGGCCGAACAACCAGC
GGAAACCAGAACGCAACCAAAGGCGCTGGGAAAAACGAGCGTCGCCACCGGCCAGCAGCA
GACGACCGCACCGGCA

consensusID : consensus_7933#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 706
fasta sequence

                              [CCGCCCACGCGTCCGCACCCGCCCAGGACTCGACGGCGAACAGCTCGGGCGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCTGGGCCGGCGCCGAGACAGCCTGAGCGGGCTGAGCTCGACCAGCCAGCCGCTCGGCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTCGACGGGAAACTACACCTCCGGCATCGTCGCGGACGTGGTGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGCGCAACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGGACGTCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACGAGCCGGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGGCGGGCGCCCAGCACAACCACCCGCTGCCACTTCGCGCCGATGCCCCTGTTCGGGGGCAACGTGCAGCAGGCCCTGCTGCTGCAGCAGCTCCAGCAGCAAACAAATGCGAACCAGCAGCAGCAGCAGCAACAGCAACATTCCCCCCAGACGGTACCCGTCAGCTCCGGCCAGC]

[+] EMBL BM612142             [CCGCCCACGCGTCCGCACCCGCCCAGGACTCGACGGCGAACAGCTCGGGCGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCTGGGCCGGCGCCGAGACAGCCTGAGCGGGCTGAGCTCGACCAGCCAGCCGCTCGGCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTCGACGGGAAACTACACCTCCGGCATCGTCGCGGACGTGGTGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGCGCAACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGGACGTCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACGAGCCGGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGGCGGGCGCCCAGCACAACCACCCGCTGCCACTTCGCGCCGATGCCCCTGTTCGGGGGCAACGTGCAGCAGGCCCTGCTGCTGCAGCAGCTCCAGCAGCAAACAAATGCGAACCAGCAGCAGCAGC                                                ]
[+] EMBL BM575990             [                                 ccGCGAACAGCTCGGGCGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCATCAGAACCTGCTGTCCGGGCTGGGCCGGCGCCGAGACAGCCTGAGCGGGCTGAGCTCGACCAGCCAGCCGCTCGGCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTCGACGGGAAACTACACCTCCGGCATCGTCGCGGACGTGGTGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGCGCAACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGGACGTCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACGAGCCGGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGGCGGGCGCCCAGCACAACCACCCGCTGCCAC TCGCGCCGATGCCCCTGTTCGGGGGCAACGTGCAGCAGGCCCTGCTGCTGCAGCAGCTCCAGCAGCAAACAAATGCGAACCAGCAGCAGCAGCAGCAACAGCAACATTCCCCCCAGACGGTACCCGTCAGCTCCGGCCAGC]




>consensus_7933#2
CCGCCCACGCGTCCGCACCCGCCCAGGACTCGACGGCGAACAGCTCGGGCGGCATCGTCG
AGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGC
AAGTGGAAACGGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCTGGGCCGGCGCC
GAGACAGCCTGAGCGGGCTGAGCTCGACCAGCCAGCCGCTCGGCAGCATGGGCCAGAACA
GCCCTGCCCCATCGTACCGGTCGACGGGAAACTACACCTCCGGCATCGTCGCGGACGTGG
TGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGCGCA
ACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGGACG
TCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACGAGCC
GGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGGCGGGCG
CCCAGCACAACCACCCGCTGCCACTTCGCGCCGATGCCCCTGTTCGGGGGCAACGTGCAG
CAGGCCCTGCTGCTGCAGCAGCTCCAGCAGCAAACAAATGCGAACCAGCAGCAGCAGCAG
CAACAGCAACATTCCCCCCAGACGGTACCCGTCAGCTCCGGCCAGC

consensusID : consensus_7933#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence

                              [CCGGAAAAAACTATCCATACGGATACTTGAAATTCATTTTAATTAGCAACGATCTAATTGTAGCTAACGAACCATCAATGGAGTATCAATAAGGGTAATTTAGAAGAGAAAAAAAACAGTACAATGCGAAAAGCTCGAAAACATTGCCTTCATTCCTTCCTCTTTTATAGTTGGCTTCAACGCTTTTCAATTGCATTAAATCATTTAAAATACGAGATTCATGTTGTTAAAAGGTAGCAACATCTCTTCATTAACAGAAAAAAACGTTCATTCCTATATGAAATAAGCGTCCAGCGTCCTATAGGAAATAAGCGTCGAGCGTCTTATATGAAAGATCCATCCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGCCACGCCGGATAACGCATCGCGTGAAACACACACACACACACCAAAGCGCAGTGAATCGTTTGCCTACCGTCTTCTCCATTCCGTTTCCCATTCCGGATGCAGAACGGCTGCACACACTGCTTATGATCGGTTGCATGCACGAAGCGAACGACGCGCCGTGTCCTACATGCGGCACCTACTTACTTAACCCACTTAAGTCAGCAGTGTCGGGGCACATCGTCGTCCTCGTCGTCGGAGGAC]

[+] EMBL BM655779             [CCGGAAAAAACTATCCATACGGATACTTGAAATTCATTTTAATTAGCAACGATCTAATTGTAGCTAACGAACCATCAATGGAGTATCAATAAGGGTAATTTAGAAGAGAAAAAAAACAGTACAATGCGAAAAGCTCGAAAACATTGCCTTCATTCCTTCCTCTTTTATAGTTGGCTTCAACGCTTTTCAATTGCATTAAATCATTTAAAATACGAGATTCATGTTGTTAAAAGGTAGCAACATCTCTTCATTAACAGAAAAAAACGTTCATTCCTATATGAAATAAGCGTCCAGCGTCCTATAGGAAATAAGCGTCGAGCGTCTTATATGAAAGATCCATCCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGCCACGCCGGATAACGCATCGCGTGAAACACACACACACACACCAAAGCGCAGTGAATCGTTTGCCTACCGTCTTCTCCATTCCGTTTCCCATTCCGGATGCAGAACGGCTGCACACACTGCTTATGATCGGTTGCATGCACGAAGCGAACGACGCGCCGTGTCCTACATGCGGCACCTACTTACTTAACCCACTTAAGTCAGCAGTGTCGGGGCACATCGTCGTCCTCGTCGTCGGAGGAC]




>consensus_7933#3
CCGGAAAAAACTATCCATACGGATACTTGAAATTCATTTTAATTAGCAACGATCTAATTG
TAGCTAACGAACCATCAATGGAGTATCAATAAGGGTAATTTAGAAGAGAAAAAAAACAGT
ACAATGCGAAAAGCTCGAAAACATTGCCTTCATTCCTTCCTCTTTTATAGTTGGCTTCAA
CGCTTTTCAATTGCATTAAATCATTTAAAATACGAGATTCATGTTGTTAAAAGGTAGCAA
CATCTCTTCATTAACAGAAAAAAACGTTCATTCCTATATGAAATAAGCGTCCAGCGTCCT
ATAGGAAATAAGCGTCGAGCGTCTTATATGAAAGATCCATCCGGTGAACAGTTTTAGGTC
TGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGCC
ACGCCGGATAACGCATCGCGTGAAACACACACACACACACCAAAGCGCAGTGAATCGTTT
GCCTACCGTCTTCTCCATTCCGTTTCCCATTCCGGATGCAGAACGGCTGCACACACTGCT
TATGATCGGTTGCATGCACGAAGCGAACGACGCGCCGTGTCCTACATGCGGCACCTACTT
ACTTAACCCACTTAAGTCAGCAGTGTCGGGGCACATCGTCGTCCTCGTCGTCGGAGGAC

consensusID : consensus_7933#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 658
fasta sequence

                              [GATTGTTCGCCGCGCTGGGGATAGTTGCTTTGTGACGGCCCGGTAGGGAATCGGAAAAATCGAACCGAAAGCGTGCGTGCGCGTATGTGTGAGTGTGTCCATCCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGTGTATGTGTGCGCGCGCGAACGTGCCTCTCGGTGTCCTTTTTGTGCACGTGTGTGCTGTATGTGCGGAGATTTTGTGCAACTTTGAGAAAGCCGTAAATCGCGACGACACAACGACTGCAACCAGCCAAGCTAGCAGCAGCAACCACAACAACAACAACAAACACTCACCAAAACGAGACTACCAATCAAACCAATAACCAAATTCGCTCTCAACGCCCGGCAAAGATGGAGATGTTCGAGAAGGGAAGCGTCATCTACATTACGCGTAGATGTGTCGGATCCACACGGCGATCGTGTCACGGTTCCACGAGGACACACGCTCCGTCACGGTGGAATGGTACGAGCGGGGCGAATCGAAAGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAGGTCCCATCGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCT]

[+] EMBL CNS08TYE             [GATTGTTCGCCGCGCTGGGGATAGTTGCTTTGTGACGGCCCGGTAGGGAATCGGAAAAATCGAACCGAAAGCGTGCGTGCGCGTATGTGTGAGTGTGTCCATCCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGTGTATGTGTGCGCGCGCGAACGTGCCTCTCGGTGTCCTTTTTGTGCACGTGTGTGCTGTATGTGCGGAGATTTTGTGCAACTTTGAGAAAGCCGTAAATCGCGACGACACAACGACTGCAACCAGCCAAGCTAGCAGCAGCAACCACAACAACAACAACAAACACTCACCAAAACGAGACTACCAATCAAACCAATAACCAAATTCGCTCTCAACGCCCGGCAAAGATGGAGATGTTCGAGAAGGGAAGCGTCATCTACATTACGCGTAGATGTGTCGGATCCACACGGCGATCGTGTCACGGTTCCACGAGGACACACGCTCCGTCACGGTGGAATGGTACGAGCGGGGCGAATCGAAAGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTGCTCGAGCTGCAGGTCCCATCGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCT]




>consensus_7933#4
GATTGTTCGCCGCGCTGGGGATAGTTGCTTTGTGACGGCCCGGTAGGGAATCGGAAAAAT
CGAACCGAAAGCGTGCGTGCGCGTATGTGTGAGTGTGTCCATCCGGTGAACAGTTTTAGG
TCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTG
TGTATGTGTGCGCGCGCGAACGTGCCTCTCGGTGTCCTTTTTGTGCACGTGTGTGCTGTA
TGTGCGGAGATTTTGTGCAACTTTGAGAAAGCCGTAAATCGCGACGACACAACGACTGCA
ACCAGCCAAGCTAGCAGCAGCAACCACAACAACAACAACAAACACTCACCAAAACGAGAC
TACCAATCAAACCAATAACCAAATTCGCTCTCAACGCCCGGCAAAGATGGAGATGTTCGA
GAAGGGAAGCGTCATCTACATTACGCGTAGATGTGTCGGATCCACACGGCGATCGTGTCA
CGGTTCCACGAGGACACACGCTCCGTCACGGTGGAATGGTACGAGCGGGGCGAATCGAAA
GGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAAAGCTCACCCGCAGCCTG
CTCGAGCTGCAGGTCCCATCGAGCGGCTGAAGCAGCAGCAGAACCTGCTGTCCGGGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7933#0      CCGGGCCCGGTAGGGCGATCGGAAAAATCGAACCGAAAGCGTGCGTGCGCGTATGTCCAT 60
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ------------------------------------------------------------
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      CCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACTTCAAAGACAAGATTGACAGCAGCTC 120
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ------------------------------------------------------------
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      GAAAGGCTCACATCTGTGCCACGCCGGATAACGCATCGCGTGAAACACACACACACACAC 180
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ------------------------------------------------------------
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      CAAAGCGCAGTGAATCGTTTGCCTACCGTCTTCTCCATTCCGTTTCCCATTCCGGATGCA 240
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ------------------------------------------------------------
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      GAACGGCTGCACACACTGCTTATGATCGGTTGCATGCACGAAGCGAACGACGCGCCGTGT 300
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ------------------------------------------------------------
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      CCTACATGCGGCACCTACTTACTTAACCCACTCAGTAAGTCAGCAGTGTCGGGCACATCG 360
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ------------------------------------------------------------
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      TCGTCCTCGTCGTCGGAGGACGAATCCACCACGATGGACGATAGCAACACCACGTTCGCG 420
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ------------------------------------------------------------
consensus_7933#4      -----------------------------------------GATTGTTCGCCGCGCTGGG 19
                                                                                  

consensus_7933#0      GGACCGTCCGCCCGTTCCTCCTACCCGACGGCCAGCACACCCGCCCA--GGACTCGACG- 477
consensus_7933#2      ----------------CCGCCCACGCGTC------CGCACCCGCCCA--GGACTCGACG- 35
consensus_7933#3      ----------------------------------------CCGGAAA--AAACTATCCAT 18
consensus_7933#1      --------------AACCAGGCAGATGTGGGTCGACGCAAGTGAACAAGGAAGCAAACGC 46
consensus_7933#4      GATAGTTGCTTTGTGACGGCCCGGTAGGGAATCGGAAAAATCGAACC-GAAAGCGTGCGT 78
                                                                *        *     *  

consensus_7933#0      GCGAACAGCTCGGGCGGCATCGTCGAGGAGAACGC----GGTGCTGCTGGAGGAAAACCG 533
consensus_7933#2      GCGAACAGCTCGGGCGGCATCGTCGAGGAGAACGC----GGTGCTGCTGGAGGAAAACCG 91
consensus_7933#3      ACGGATA-CTTGAAATTCATTTTAATTAGCAACGATCTAATTGTAGCTAACGAACCATCA 77
consensus_7933#1      -TGCTGA-CCCGCAAGTTTTACAATCCGACCAG----TCCAAACCGCACCATCTGCTGCC 100
consensus_7933#4      GCGCGTA-TGTGTGAGTGTGTCCATCCGGTGAACAGTTTTAGGTCTGATCCGGTCCCACT 137
                        *   *    *                   *                          * 

consensus_7933#0      AAAGCTCACCCGCA-GCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGC 592
consensus_7933#2      AAAGCTCACCCGCA-GCCTGCTCGAGCTGCAAGTGGAAACGGAGCGGCTGAAGCAGCAGC 150
consensus_7933#3      ATGGAGTATCAATAAGGGTAATTTAGAAGAGAAAAAAAACAGTACAATGCGAAAAGCTCG 137
consensus_7933#1      AGGGTGTAGTGGTGTGGTGCGCTTTTAAGTGTCC---TGTGTGTGTATGTGTGC-GCGCG 156
consensus_7933#4      TCAAAGACAAGATTGACAGCAGCTCGAAAGGCTCACATCTGTGTGTATGTGTGC-GCGCG 196
                                                                             **   

consensus_7933#0      AGAACCTGCTGTCCGGG-CTGGGCCGGCGCCGAGACAGCCTGAGCG------GACTGAGC 645
consensus_7933#2      AGAACCTGCTGTCCGGG-CTGGGCCGGCGCCGAGACAGCCTGAGCG------GGCTGAGC 203
consensus_7933#3      AAAACATTGCCTTCATT-CCTTCCTCTTTTATAGTTGGCTTCAACGCTTTTCAATTGCAT 196
consensus_7933#1      CGAACGTGCCTCTCGGTGTCCTTTTTGTGCACGTGTGTGCTGTATGTGCGGAGATTTTGT 216
consensus_7933#4      CGAACGTGCCTCTCGGTGTCCTTTTTGTGCACGTGTGTGCTGTATGTGCGGAGATTTTGT 256
                        *** *      *                          *    *         *    

consensus_7933#0      TCGACCAGCCAGCCGCTCG-GCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTC 704
consensus_7933#2      TCGACCAGCCAGCCGCTCG-GCAGCATGGGCCAGAACAGCCCTGCCCCATCGTACCGGTC 262
consensus_7933#3      TAAATCATTTAAAATACGA-GATTCATGTTGTTAAAAGGTA--GCAACATC-TCTTCATT 252
consensus_7933#1      GCAACTTTTGAGAAAGCCGTAAATCGCGACGACACAACGACTGCAACCAGCCAAGCTAGC 276
consensus_7933#4      GCAACTTT-GAGAAAGCCGTAAATCGCGACGACACAACGACTGCAACCAGCCAAGCTAGC 315
                         *      *             *  *       *  *        ** *         

consensus_7933#0      GACGGGTAAGGTTTTTTTTTTTTGCCGAACGGCGGCTGGTGAACGACGCCATCGCGCGCT 764
consensus_7933#2      GACGGG------------------------------------------------------ 268
consensus_7933#3      AACAGAAAA--------------------------------------------------- 261
consensus_7933#1      AGCAGCAACCACAACAACAACAACA-----------------ACAAACACTCACCAAAAC 319
consensus_7933#4      AGCAGCAACCACAACAACAACAAC--------------------AAACACTCACCAAAAC 355
                        * *                                                       

consensus_7933#0      AATGATTCGCTTCCCCATTCGCCGCCGCAGGAAACTACACCTCCGGCATCGTCGCGGACG 824
consensus_7933#2      -------------------------------AAACTACACCTCCGGCATCGTCGCGGACG 297
consensus_7933#3      -------------------------------AAACGTTCATTCCTATAT-GAAATAAGCG 289
consensus_7933#1      GAGACTACCAATCAAACCAATAACCAAATTCGCTCTCAACGCCCGGCAAAGATGGAGATG 379
consensus_7933#4      GAGACTACCAATCAAACCAATAACCAAATTCGCTCTCAACGCCCGGCAAAGATGGAGATG 415
                                                        *       **   *  *        *

consensus_7933#0      TGGTGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGC 884
consensus_7933#2      TGGTGCGGGAGATACGCGACATCTGCCGGGTGCGGGAGGACGCCACGTTCGAGCGGTTGC 357
consensus_7933#3      TCCAGCGTCCTATAGGAAATAAGCGTCGAGCGTCTTAT-ATGAAAGATCCATCCGGT-GA 347
consensus_7933#1      TTCGAGAAGGGAAGCGTCATCTACATTACGCGTAGCGATG-GTCGGATCCACACGGC-GA 437
consensus_7933#4      TTCGAGAAGGGAAGCGTCATCTACATTACGCGTAGATGTG--TCGGATCCACACGGC-GA 472
                      *          *   *  *          * *               * *   ***  * 

consensus_7933#0      GCAACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGG 944
consensus_7933#2      GCAACCTGCAGGAAAACCACATGTGGTCGATCAACGACACGCTGCAGCGCCTCGCCAAGG 417
consensus_7933#3      ACAGTTTTAGGTCTGATCCGGTCCCACT--TCAAAGACAAGATTGACAGCAGCTCGAAAG 405
consensus_7933#1      TCGTGTCACGGTTCCACGAGGACACACG---CTCCGTCACGGTGGAATGGTACGAGCGGG 494
consensus_7933#4      TCGTGTCACGGTTCCACGAGGACACACG---CTCCGTCACGGTGGAATGGTACGAGCGGG 529
                       *        *    *               *   * ** * *  *  *   *      *

consensus_7933#0      ACGTCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACG- 1003
consensus_7933#2      ACGTCGACACGATGCAGAAGTCGGTCAGTGCGGCCCGGCACGACCTGGAGAAGCTGACG- 476
consensus_7933#3      GC-TCACATCTGTGCC-ACGCCGGATAACGCATC---GCGTGAAACACACACACACAC-- 458
consensus_7933#1      GCGAATCGAAAGGCAAAGAGATCGAGATCGACATGCTGCTCGAGCTGAACAGAACGATGC 554
consensus_7933#4      GCGAATCGAAAGGCATCGTCGAGGAGAACGCGGTGCTGCTGGAGGAAAACCGAA------ 583
                       *                     *  *  *       **  **     *           

consensus_7933#0      AGCC--GGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGG 1061
consensus_7933#2      AGCC--GGGTGCTGCAGCTGGAGAGTATCGTGCTGCCGCAGGCGGCCGTCTGTCTGGCGG 534
consensus_7933#3      ACCA--AAGCGCAG----TGAATCGT-TTGC-CTACCGTCTTCTCCATTCCGTTTCCCAT 510
consensus_7933#1      AGCTGCAGCCGCAGCTG-CAGCAGGAGCTGCACCACCAGCAGCAACATCAGCACCAGCAG 613
consensus_7933#4      AGCT-CACCCGCAGC---CTGCTCGAGCTGCAGGTCCCATCG-AGCGGCTGAAGCAGCAG 638
                      * *       ** *          *    *     **        *           *  

consensus_7933#0      CGGGCGCCCAGCACAACCACC-CGCTGCCACT-CGCGCCGATGCCCCTGTTCGGGGGCAA 1119
consensus_7933#2      CGGGCGCCCAGCACAACCACC-CGCTGCCACTTCGCGCCGATGCCCCTGTTCGGGGGCAA 593
consensus_7933#3      TCCGGATGCAGAACGGCTGCA-CAC-ACTGCTTATGATCGGT-TGCATGCACGAAGCGAA 567
consensus_7933#1      CAC-TACCAGCAGCAGCAGCAGCAGCACGAGCCGGAACCGAAACCGACGGCGGAAGAGGC 672
consensus_7933#4      CAG-AACCTGCTGTCCGGGCT--------------------------------------- 658
                                         *                                        

consensus_7933#0      CGTGCAGCAAGGCGTTGCTGCTGCAGCAGCTCCAGCAGCAAACA---------------- 1163
consensus_7933#2      CGTGCAGCA-GGCCCTGCTGCTGCAGCAGCTCCAGCAGCAAACAAATGCGAACCAGCAGC 652
consensus_7933#3      CGACGCGCCGTGTCCTACA--TGCGGCACCTACT-TACTTAACCCACTTAAGTCAGCAGT 624
consensus_7933#1      GAAGCAGCGAAAGAAAACGCCCGCGCCCGCTAACCTAGCACGCAATCCAACGCAAGCGAT 732
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      ------------------------------------------------------------
consensus_7933#2      AGCAGCA-GCAACAGCAACATTCCCCCCAGACGGTACCCGTCAGCTCCGGCCAGC----- 706
consensus_7933#3      GTCGGGGCACATCGTCGTCCTCGTCGTCGGAGGAC------------------------- 659
consensus_7933#1      CATCCGATACAACAACTATCTAGCCCAACGGGGCGATTCGGGCAAGGGCGCCAGCATCCC 792
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      ------------------------------------------------------------
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      GGCACCGTCCAACTTCAATCGGGCCACCATTCTACACACCGGGCCGACGCAGCGCTCGGA 852
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      ------------------------------------------------------------
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      ACAGTCCGGTACTGGACGCACCACCAATGTTTCGTCCCGGATCCTTGGTAACAGCAACAA 912
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      ------------------------------------------------------------
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      CACTGGCCGTAGCACGATGATCAACAACCGCGCGGCCGAACAACCAGCGGAAACCAGAAC 972
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      ------------------------------------------------------------
consensus_7933#2      ------------------------------------------------------------
consensus_7933#3      ------------------------------------------------------------
consensus_7933#1      GCAACCAAAGGCGCTGGGAAAAACGAGCGTCGCCACCGGCCAGCAGCAGACGACCGCACC 1032
consensus_7933#4      ------------------------------------------------------------
                                                                                  

consensus_7933#0      ----
consensus_7933#2      ----
consensus_7933#3      ----
consensus_7933#1      GGCA 1036
consensus_7933#4      ----