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Anopheles gambiae
cluster # 7939 cluster # 7939       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7939#0 length = 1121 sequences # 2  
consensus_7939#1 length = 737 sequences # 3  
consensus_7939#2 length = 664 sequences # 1  
consensus_7939#3 length = 649 sequences # 1  
consensus_7939#4 length = 507 sequences # 1  

consensusID : consensus_7939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1121
fasta sequence
                              [CCGGCCCTCTCGATTGGCTGTACGTAGGGAGGAGGGTGGCATTATGGAGCCACCCACTACGCCCATAGGACGCGATGAGCTGGCATTACGCAGGCATCGGTTTTTCTCGGAACTGCTCAATGCTGCCCATGCTGCCGTGGAGCATCGTGTGCGTTTTGATCCGCTGGGACCAGAAGTTGCCAAGGTTCCGACGGAGGAGGAATCGGAGGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACGGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCTTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGACTATCCAAAGCTATCGCGAAAAGAATCGAACCTCCCCGTTCTTTAACCATCTGTCCGCGATTAGCGAAAGTATTCCGGCGCTCGGATGGGTCTGTGTGGCCCCCACACCAGGGCCGTACGTGAAGGAAATGAACGATGCCGGTCAGTTCTACACTAACCGTGTCCTTAAAGATTGGAAAGAGAAGGACAGCACCCATGTGGAGTGGGCTCGCGCCTGGATTCAAA]

[+] EMBL BM635034             [CCGGCCCTCTCGATTGGCTGTACGTAGGGAGGAGGGTGGCATTATGGAGCCACCCACTACGCCCATAGGACGCGATGAGCTGGCATTACGCAGGCATCGGTTTTTCTCGGAACTGCTCAATGCTGCCCATGCTGCCGTGGAGCATCGTGTGCGTTTTGATCCGCTGGGACCAGAAGTTGCCAAGGTTCCGACGGAGGAGGAATCGGAGGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACGGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCTTAGGAGGGACAACGAGCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM617490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGCCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGACTATCCAAAGCTATCGCGAAAAGAATCGAACCTCCCCGTTCTTTAACCATCTGTCCGCGATTAGCGAAAGTATTCCGGCGCTCGGATGGGTCTGTGTGGCCCCCACACCAGGGCCGTACGTGAAGGAAATGAACGATGCCGGTCAGTTCTACACTAACCGTGTCCTTAAAGATTGGAAAGAGAAGGACAGCACCCATGTGGAGTGGGCTCGCGCCTGGATTCAAA]


>consensus_7939#0 CCGGCCCTCTCGATTGGCTGTACGTAGGGAGGAGGGTGGCATTATGGAGCCACCCACTAC GCCCATAGGACGCGATGAGCTGGCATTACGCAGGCATCGGTTTTTCTCGGAACTGCTCAA TGCTGCCCATGCTGCCGTGGAGCATCGTGTGCGTTTTGATCCGCTGGGACCAGAAGTTGC CAAGGTTCCGACGGAGGAGGAATCGGAGGATTGTGATCCCGACCTCAAACCTTCGTCAGC CCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTAC CGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGG CAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTT ACCGACGGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGA CAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCA TAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATT GACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCTT AGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATT CGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATT CGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGC ACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGACTAT CCAAAGCTATCGCGAAAAGAATCGAACCTCCCCGTTCTTTAACCATCTGTCCGCGATTAG CGAAAGTATTCCGGCGCTCGGATGGGTCTGTGTGGCCCCCACACCAGGGCCGTACGTGAA GGAAATGAACGATGCCGGTCAGTTCTACACTAACCGTGTCCTTAAAGATTGGAAAGAGAA GGACAGCACCCATGTGGAGTGGGCTCGCGCCTGGATTCAAA



consensusID : consensus_7939#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 737
fasta sequence
                              [CCGTTCGAACCGAAGGAAAGAATACAAGCAGAAGTGATCAGTGCAAACAGTTAACAAGCAAATTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACTGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGACTATCCAAAGCTATCGC]

[+] EMBL BM587487             [CCGTTCGAACCGAAGGAAAGAATACAAGCAGAAGTGATCAGTGCAAACAGTTAACAAGCAAATTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACTGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAA                                                 ]
[+] EMBL BM627938             [                                             ccgAGTTAACAAGCAAATTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACTGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGACTATCCAAAGCTATCGC]
[+] EMBL BM651255             [                                                                                                               CCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACTGTTCTGCCCTCGACCC                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_7939#1 CCGTTCGAACCGAAGGAAAGAATACAAGCAGAAGTGATCAGTGCAAACAGTTAACAAGCA AATTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCA GCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGT ACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTT GGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGAT TTACCGACTGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTA GACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAG CATAATACAACCACTAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCA CCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCT CATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGC AATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGA GTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGA CTATCCAAAGCTATCGC



consensusID : consensus_7939#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence
                              [CCGCCCACGCGTCCGTACTCTGATCATACATGATGTGAAAACGTGCTCCAATCCAGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACGGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCTTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAA]

[+] EMBL BM576071             [CCGCCCACGCGTCCGTACTCTGATCATACATGATGTGAAAACGTGCTCCAATCCAGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACGGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCTTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAA]


>consensus_7939#2 CCGCCCACGCGTCCGTACTCTGATCATACATGATGTGAAAACGTGCTCCAATCCAGATTG TGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGA GCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACG CATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGA GGACACTGATCCGAGCGCTGACGATTTACCGACGGTTCTGCCCTCGACCCCACCACCGTC GGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGAC CGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTAGCAAGGCACCGCAGTATTG TCATTATCCTCCTCGCAGCACGGCACCTTAGGAGGGACAACGAGCAAGATGAGTATTAAC GCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATC GGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGC GTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCT GAAA



consensusID : consensus_7939#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 649
fasta sequence
                              [CCGGGAAAGAATACAAGCAGAAGTGTTCAGTGCAAACAGTTAACAAGCAAATTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACGGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAA]

[+] EMBL BM644004             [CCGGGAAAGAATACAAGCAGAAGTGTTCAGTGCAAACAGTTAACAAGCAAATTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACGGTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAA]


>consensus_7939#3 CCGGGAAAGAATACAAGCAGAAGTGTTCAGTGCAAACAGTTAACAAGCAAATTAAACGAT TCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGCCCGTGAGCT AGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTACCGTATCTGC GCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGGCAAGGCGGT CATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACGATTTACCGACGGT TCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGA AAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAAC CACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCA AGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGAC AACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTT TATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAA



consensusID : consensus_7939#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 507
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGACTATCCAAAGCTATCG]

[+] EMBL BM654560             [CCGCCCACGCGTCCGCCCACGCGTCCGGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGCCACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGACTATCCAAAGCTATCG]


>consensus_7939#4 CCGCCCACGCGTCCGCCCACGCGTCCGGCCCTCGACCCCACCACCGTCGGCCTCGTATTT GCATCAGAAAGTAGACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCA AAAGGGCCGCCAGCATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAA CCATACTAATCCATTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTC GCAGCACGGCACCGTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATAT TATGCTCGGCTCATTCGCCAACTTTATTGCACTTTCGAACAAAATCGGAGGCGACGTAGC CACCCAAGCGCAATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGC ATCCGCCTCGAGTGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGA TAAGATTTCGACTATCCAAAGCTATCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7939#1      ------------------------------------------------------------
consensus_7939#3      ------------------------------------------------------------
consensus_7939#2      ------------------------------------------------------------
consensus_7939#0      CCGGCCCTCTCGATTGGCTGTACGTAGGGAGGAGGGTGGCATTATGGAGCCACCCACTAC 60
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      ----------------------------------------------------------CC 2
consensus_7939#3      ------------------------------------------------------------
consensus_7939#2      ------------------------------------------------------------
consensus_7939#0      GCCCATAGGACGCGATGAGCTGGCATTACGCAGGCATCGGTTTTTCTCGGAACTGCTCAA 120
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      GTTCGAACCGAAGGAAAGAATACAAGCAGAAGTGATCAGTGCAAACAGTTAACAAGCAAA 62
consensus_7939#3      -------CCG--GGAAAGAATACAAGCAGAAGTGTTCAGTGCAAACAGTTAACAAGCAAA 51
consensus_7939#2      -----------------------CCGCCCACGCGTCC---GTACTCTGATCATACATGAT 34
consensus_7939#0      TGCTGCCCATGCTGCCGTGGAGCATCGTGTGCGTTTTGATCCGCTGGGACCAGAAGTTGC 180
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      TTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGC 122
consensus_7939#3      TTAAACGATTCCTATCTCCTGCATTTGTGATTGTGATCCCGACCTCAAACCTTCGTCAGC 111
consensus_7939#2      GTGAA-------AACGTGCTCCAATCCAGATTGTGATCCCGACCTCAAACCTTCGTCAGC 87
consensus_7939#0      CAAGGTTCCGACGGAGGAGGAATCGGAGGATTGTGATCCCGACCTCAAACCTTCGTCAGC 240
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      CCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTAC 182
consensus_7939#3      CCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTAC 171
consensus_7939#2      CCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTAC 147
consensus_7939#0      CCGTGAGCTAGAGTGCTTGATCGATCGTCTGGAGCGTATTGTCGATCGGCTTGAACGTAC 300
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      CGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGG 242
consensus_7939#3      CGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGG 231
consensus_7939#2      CGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGG 207
consensus_7939#0      CGTATCTGCGCGTGAGTTGGAAGAAACGAGACGCATACTGAAAGACGCGTGTGCTGTTGG 360
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      CAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACG-ATT 301
consensus_7939#3      CAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACG-ATT 290
consensus_7939#2      CAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACG-ATT 266
consensus_7939#0      CAAGGCGGTCATTCGTTCCAACACCACGGTAGAGGACACTGATCCGAGCGCTGACG-ATT 419
consensus_7939#4      -----------------------------------------------CCGCCCACGCGTC 13
                                                                      ***  ***  * 

consensus_7939#1      TACCGACT-GTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTA 360
consensus_7939#3      TACCGACG-GTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTA 349
consensus_7939#2      TACCGACG-GTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTA 325
consensus_7939#0      TACCGACG-GTTCTGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTA 478
consensus_7939#4      CGCCCACGCGTCCGGCCCTCGACCCCACCACCGTCGGCCTCGTATTTGCATCAGAAAGTA 73
                        ** **  ** * **********************************************

consensus_7939#1      GACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAG 420
consensus_7939#3      GACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAG 409
consensus_7939#2      GACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAG 385
consensus_7939#0      GACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAG 538
consensus_7939#4      GACAGTTTGGAAAGCACCTTGTTTCCCGCGTTGACCGATCAACCGCAAAAGGGCCGCCAG 133
                      ************************************************************

consensus_7939#1      CATAATACAACCACT--------------------------------------------- 435
consensus_7939#3      CATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCA 469
consensus_7939#2      CATAATACAACCACT--------------------------------------------- 400
consensus_7939#0      CATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCA 598
consensus_7939#4      CATAATACAACCACTGTAATACAATCTAAACCATCTGCTTTATTAAACCATACTAATCCA 193
                      ***************                                             

consensus_7939#1      -------------AGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACC 482
consensus_7939#3      TTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACC 529
consensus_7939#2      -------------AGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACC 447
consensus_7939#0      TTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACC 658
consensus_7939#4      TTGACCATCCAAGAGCAAGGCACCGCAGTATTGTCATTATCCTCCTCGCAGCACGGCACC 253
                                   ***********************************************

consensus_7939#1      GTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCA 542
consensus_7939#3      GTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCA 589
consensus_7939#2      TTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCA 507
consensus_7939#0      TTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCA 718
consensus_7939#4      GTAGGAGGGACAACGAGCAAGATGAGTATTAACGCTTACGAGGATATTATGCTCGGCTCA 313
                       ***********************************************************

consensus_7939#1      TTCGCCAACTTTATTGCACTTTCGAACAAAATCGG-AGGCGACGTAGCCACCCAAGCGCA 601
consensus_7939#3      TTCGCCAACTTTATTGCACTTTCGAACAAAATCGG-AGGCGACGTAGCCACCCAAGCGCA 648
consensus_7939#2      TTCGCCAACTTTATTGCACTTTCGAACAAAATCGGGAGGCGACGTAGCCACCCAAGCGCA 567
consensus_7939#0      TTCGCCAACTTTATTGCACTTTCGAACAAAATCGG-AGGCGACGTAGCCACCCAAGCGCA 777
consensus_7939#4      TTCGCCAACTTTATTGCACTTTCGAACAAAATCGG-AGGCGACGTAGCCACCCAAGCGCA 372
                      *********************************** ************************

consensus_7939#1      ATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAG 661
consensus_7939#3      A----------------------------------------------------------- 649
consensus_7939#2      ATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAG 627
consensus_7939#0      ATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAG 837
consensus_7939#4      ATTCGTGAAGGAAGCTTTCGATGCTCAGTTTGCGTTCCTGAAGGTGGCATCCGCCTCGAG 432
                      *                                                           

consensus_7939#1      TGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGAC 721
consensus_7939#3      ------------------------------------------------------------
consensus_7939#2      TGCACCATCGAATACGGATTTACAGAATTTGCTGAAA----------------------- 664
consensus_7939#0      TGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGAC 897
consensus_7939#4      TGCACCATCGAATACGGATTTACAGAATTTGCTGAAACCTACCTCGGATAAGATTTCGAC 492
                                                                                  

consensus_7939#1      TATCCAAAGCTATCGC-------------------------------------------- 737
consensus_7939#3      ------------------------------------------------------------
consensus_7939#2      ------------------------------------------------------------
consensus_7939#0      TATCCAAAGCTATCGCGAAAAGAATCGAACCTCCCCGTTCTTTAACCATCTGTCCGCGAT 957
consensus_7939#4      TATCCAAAGCTATCG--------------------------------------------- 507
                                                                                  

consensus_7939#1      ------------------------------------------------------------
consensus_7939#3      ------------------------------------------------------------
consensus_7939#2      ------------------------------------------------------------
consensus_7939#0      TAGCGAAAGTATTCCGGCGCTCGGATGGGTCTGTGTGGCCCCCACACCAGGGCCGTACGT 1017
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      ------------------------------------------------------------
consensus_7939#3      ------------------------------------------------------------
consensus_7939#2      ------------------------------------------------------------
consensus_7939#0      GAAGGAAATGAACGATGCCGGTCAGTTCTACACTAACCGTGTCCTTAAAGATTGGAAAGA 1077
consensus_7939#4      ------------------------------------------------------------
                                                                                  

consensus_7939#1      --------------------------------------------
consensus_7939#3      --------------------------------------------
consensus_7939#2      --------------------------------------------
consensus_7939#0      GAAGGACAGCACCCATGTGGAGTGGGCTCGCGCCTGGATTCAAA 1121
consensus_7939#4      --------------------------------------------
                                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)