cluster # 8010

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Anopheles gambiae
cluster # 8010 cluster # 8010 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8010#0 length = 1583 sequences # 7

consensus_8010#1 length = 138 sequences # 1

consensusID : consensus_8010#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1583
fasta sequence

                              [CCGCCCACGCGTCCGCGGACGCGTGGGGTTGAAATAAAACGTCAAAACAGTTAACGACTGCTCGATATCGCATATAGGCAAACACGGGGAAAAAATTGAGCATTATAACTAAACGACTGTTGGTATGCATCGCATATGCTCTTGACAGTCATTTGTTAATTTTAACGACTGGTCCTATGCGGTCGTTAAACAAACGAATGTCAAGAGCGTATCCGATGCAAGTTAACAGTCGTTTAGTTGTACTGCTCGATTTTTTCCCCCGTGTTGGCCTATATGCCATTTTGAGCAGTCGTTAACTGTTTTGACGATCGTTTATTTTAACAGGAATGAACAACAAATGAATTCGGTCAAACCAAAATGAACTTTAAACGACTGTTAAAATGTGTTCATTTATTCGCGATGCCGGCTAATGTTCTATTCCACCGCACGCATTTTCATCGCATTTAAGAAGCTTTTTCATTAGCCGCGTTCAGACACGGCATATTCTGCCAGAAAATATCTGTCAAACACACTTTCTCACTGAGGTAGGGGAAGTCTAGCAGCCTGTGGTGAATCTTTTTCAGGTAATGCAAGCTATCTATCGCTGGATGGATAACAAAAATATTTGCCTGCAATCTTTTGACAGGACGAGAAAAATATCGTGTTTTTCGTGTTTAAACATTAGTTTTCGATTGCTTCCAAGTTTTCTATGTTCTAACGGTTGTATATTTTGCATTTCTTTCAACGATCGTTGTATTCTGGTAAGATTCGTGGTGTGTAAACGCAAAAATATTGGCGAATCTTTTTTGGACTTGTTTCTGGTGGAAGGGGAAAGTTTCGCGAATAAAGATATACCCAGTATTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCATTTAAAGCTACTTTGAATGATTTAACACAGGGGTCTTCTAATTTTTCAGTTCACAGGCCGCATTGCTTCGCAAGTAGTGTTGTTGAGGGTCATTTTGGCTTTACTTTTAGTTAAACGAAATTAAAAATCTTATTATTATAACAAATTTCAAACTGAAAATGTAATATTTCCACAGTTCTCTAATACTGACTTATACTTTTAGATCTCTAATACTTTTAGTGTCGTTTTAAAATAGTTAAAATATATATTTTAATAAAAATTACTGATAATTATAAATTATTTCAACCTTTTCAAAGCAATCGCGAGCCGCATGATTGACTTTCATGGCTACATTTGGCCCCAACTACGTAGTTTTGAAGCCCCTGTTTTAATAAATATATAGTAATTATGAATACTTTGTAAAAAACATAATTTTAGTGTCGTTCAAGGCTGGTTC-ATATGCTTTGGAAATTAAAGGGAGATAAAATAAATTAATACTTCCAAATTATCAAATTTTTAAATGTATTTCTAAGTCATATGATAAGGAGCTTAAAGCTTATCAGTTCTATTATAGAAATGTAGGGAAATGTATGATAATCAATCGATTTCAAAATATTACCCTTACTCAAAAACCATGTGTAGGCGAATCATAGATAAAACCAATAAAATCAATGGAATTTTCATTAACCTATTCAATAATAAAAA]

[+] EMBL BM643501             [CCGCCCACGCGTCCGCGGACGCGTGGGGTTGAAATAAAACGTCAAAACAGTTAACGACTGCTCGATATCGCATATAGGCAAACACGGGGAAAAAATTGAGCATTATAACTAAACGACTGTTGGTATGCATCGCATATGCTCTTGACAGTCATTTGTTAATTTTAACGACTGGTCCTATGCGGTCGTTAAACAAACGAATGTCAAGAGCGTATCCGATGCAAGTTAACAGTCGTTTAGTTGTACTGCTCGATTTTTTCCCCCGTGTTGGCCTATATGCCATTTTGAGCAGTCGTTAACTGTTTTGACGATCGTTTATTTTAACAGGAATGAACAACAAATGAATTCGGTCAAACCAAAATGAACTTTAAACGACTGTTAAAATGTGTTCATTTATTCGCGATGCCGGCTAATGTTCTATTCCACCGCACGCATTTTCATCGCATTTAAGAAGCTTTTTCATTAGCCGCGTTCAGACACGGCATATTCTGCCAGAAAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX625477             [                                                                                                                                                                                                                                                                                                                                                                                                                     GCTAATGTTCTATTCCACCGCACGCATTTTCATCGCATTTAAGAAGCTTTTTCATTAGCCGCGTTCAGACACGGCATATTCTGCCAGAAAATATCTGTCAAACACACTTTCTCACTGAGGTAGGGGAAGTCTAGCAGCCTGTGGTGAATCTTTTTCAGGTAATGCAAGCTATCTATCGCTGGATGGATAACAAAAATATTTGCCTGCAATCTTTTGACAGGACGAGAAAAATATCGTGTTTTTCGTGTTTAAACATTAGTTTTCGATTGCTTCCAAGTTTTCTATGTTCTAACGGTTGTATATTTTGCATTTCTTTCAACGATCGTTGTATTCTGGTAAGATTCGTGGTGTGTAAACGCAAAAATATTGGCGAATCTTTTTTGGACTTGTTTCTGGTGGAAGGGGAAAGTTTCGCGAATAAAGATATACCCAGTATTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX626017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGAAGTCTAGCAGCCTGTGGTGAATCTTTTTCAGGTAATGCAAGCTATCTATCGCTGGATGGATAACAAAAATATTTGCCTGCAATCTTTTGACAGGACGAGAAAAATATCGTGTTTTTCGTGTTTAAACATTAGTTTTCGATTGCTTCCAAGTTTTCTATGTTCTAACGGTTGTATATTTTGCATTTCTTTCAACGATCGTTGTATTCTGGTAAGATTCGTGGTGTGTAAACGCAAAAATATTGGCGAATCTTTTTTGGACTTGTTTCTGGTGGAAGGGGAAAGTTTCGCGAATAAAGATATACCCAGTATTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCATTTAAAGCTACTTTGAATGATTTAACACAGGGGTCTTCTAATTTTTCAGTTCACAGGCCGCATTGCTTCGCAAGTAGTGTTGTTGAGGGTCATTTTGGCTTTACTTTTAGTTAAACGAAATTAAAAATCTTATTATTATAACAAATTTCAAACTGAAAATGTAATATTTCCACAGTTCTCTAATACTGACTTATACTTTTAGATCTCTAATACTTTTAGTGTCGTTTTAAAATAGTTAAAATATATATTTTAATAAAAATTACTGATAATTATAAATTATTTCAACCTTTTCAAAGCAATCGCGAGCCGCATGATTGACTTTCATGGCTACATTTGGCCCCAACTACGTAGTTTTGAAGCCCCTGGTTTAATAAATATATAGTAATTATGAATACTTTGTAAAAAACATAATTTTAGTGTCGTTCAAGGCTGGTTC ATATGCTTTGGAAATTAAAGGGAG                                                                                                                                                                                                                                ]
[+] EMBL BX626008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGTAATGCAAGCTATCTATCGCTGGATGGATAACAAAAATATTTGCCTGCAATCTTTTGACAGGACGAGAAAAATATCGTGTTTTTCGTGTNTAAACNTTAGTTTTCGATTGCTTCCAAGTTTTCTATGTTCTAACGGTTGTATATTTTGCATTTCTTTCAACGATCGTTGTATTCTGGTAAGATTCGTGGNGTGTAAACGCAAAAATATTGGCGAATCTTTTTTGGACTTGTNTCTGGTGGAAGGGGAAAGTTTCGCGAATAAAGATATACCCAGTATTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCATTTAAAGCTACTTTGAATGATTTAACACAGGGGNCTTCTAATTTTTCAGNTCACAGGCCGCATTGCTTCGCAAGTAGTGTTGTTGAGGGTCATTTTGGCTTTACTTTTAGTTAAACGAAATTAAAAATCTTATTATTATAACAAATTTCAAACTGAAAATGTAATATTTCCACAGTTCTCTAATACTGACTTATACTTTTAGATCTCTAATACTTTTAGTGTCGTTTTAAAATAGTTAAAATATATATTNTAATAAAAATTACTGATAATTATAAATTATTTCAACCTTTTCAAAGCAATCGCGAGCCGCATGATTGACTTTCATGGCTACATTTGGCCCCAACTACGTAGTTTTGAAGCCCCTGTTTTAATAAATATATAGTAATTATGAATACTTTGTAA                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX615626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCTTTTGACAGGACGAGAAAAATATCTTGTTTTTCGTGTTTAAACATTAGTTTTCGATTGCTTCCAAGTTTTCTATGTTCTAACGGTTGTATATTTTGCATTTCTTTCAACGATCGTTGTATTCTGGTAAGATTCGTGGTGTGTAAACGCAAAAATATTGGCGAATCTTTTTTGGACTTGTTTCTGGTGGAAGGGGAAAGTTTCGCGAATAAAGATATACCCAGTATTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCATTTAAAGCTACTTTGAATGATTTAACACAGGGGTCTTCTAATTTTTCAGTTCACAGGCCGCATTGCTTCGCAAGTAGTGTTGTTGAGGGTCATTTTGGCTTTACTTTTAGTTAAACGAAATTAAAAATCTTATTATTATAACAAATTTCAAACTGAAAATGTAATATTTCCACAGTTCTCTAATACTGACTTATACTTTTAGATCTCTAATACTTTTAGTGTCGTTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AGA284924            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGGGGAAAGTTTCGCGAATAAAGATATACCCAGTATTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCATTTAAAGCTACTTTGAATGATTTAACACAGGGGTCTTCTAATTTTTCAGTTCACAGGCCGCATTGCTTCGCAAGTAGTGTTGTTGAGGGTCATTTTGGCTTTACTTTTAGTTAAACGAAATTAAAAATCTTATTATTATAACAAATTTCAAACTGAAAATGTAATATTTCCACAGTTCTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AGA283634            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTAAAATAGTTAAAATATATATTTTAATAAAAATTACTGATAATTATAAATTATTTCAACCTTTTCAAAGCAATCGCGAGCCGCATGATTGACTTTCATGGCTACATTTGGCCCCAACTACGTAGTTTTGAAGCCCCTGTTTTAATAAATATATAGTAATTATGAATACTTTGTAAAAAACATAATTTTAGTGTCGTTCAAGGCTGTTTCAATATGCTTTGGAAATTAAAGGGAGATAAAATAAATTAATACTTCCAAATTATCAAATTTTTAAATGTATTTCTAAGTCATATGATAAGGAGCTTAAAGCTTATCAGTTCTATTATAGAAATGTAGGGAAATGTATGATAATCAATCGATTTCAAAATATTACCCTTACTCAAAAACCATGTGTAGGCGAATCATAGATAAAACCAATAAAATCAATGGAATTTTCATTAACCTATTCAATAATAAAAA]




>consensus_8010#0
CCGCCCACGCGTCCGCGGACGCGTGGGGTTGAAATAAAACGTCAAAACAGTTAACGACTG
CTCGATATCGCATATAGGCAAACACGGGGAAAAAATTGAGCATTATAACTAAACGACTGT
TGGTATGCATCGCATATGCTCTTGACAGTCATTTGTTAATTTTAACGACTGGTCCTATGC
GGTCGTTAAACAAACGAATGTCAAGAGCGTATCCGATGCAAGTTAACAGTCGTTTAGTTG
TACTGCTCGATTTTTTCCCCCGTGTTGGCCTATATGCCATTTTGAGCAGTCGTTAACTGT
TTTGACGATCGTTTATTTTAACAGGAATGAACAACAAATGAATTCGGTCAAACCAAAATG
AACTTTAAACGACTGTTAAAATGTGTTCATTTATTCGCGATGCCGGCTAATGTTCTATTC
CACCGCACGCATTTTCATCGCATTTAAGAAGCTTTTTCATTAGCCGCGTTCAGACACGGC
ATATTCTGCCAGAAAATATCTGTCAAACACACTTTCTCACTGAGGTAGGGGAAGTCTAGC
AGCCTGTGGTGAATCTTTTTCAGGTAATGCAAGCTATCTATCGCTGGATGGATAACAAAA
ATATTTGCCTGCAATCTTTTGACAGGACGAGAAAAATATCGTGTTTTTCGTGTTTAAACA
TTAGTTTTCGATTGCTTCCAAGTTTTCTATGTTCTAACGGTTGTATATTTTGCATTTCTT
TCAACGATCGTTGTATTCTGGTAAGATTCGTGGTGTGTAAACGCAAAAATATTGGCGAAT
CTTTTTTGGACTTGTTTCTGGTGGAAGGGGAAAGTTTCGCGAATAAAGATATACCCAGTA
TTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCAT
TTAAAGCTACTTTGAATGATTTAACACAGGGGTCTTCTAATTTTTCAGTTCACAGGCCGC
ATTGCTTCGCAAGTAGTGTTGTTGAGGGTCATTTTGGCTTTACTTTTAGTTAAACGAAAT
TAAAAATCTTATTATTATAACAAATTTCAAACTGAAAATGTAATATTTCCACAGTTCTCT
AATACTGACTTATACTTTTAGATCTCTAATACTTTTAGTGTCGTTTTAAAATAGTTAAAA
TATATATTTTAATAAAAATTACTGATAATTATAAATTATTTCAACCTTTTCAAAGCAATC
GCGAGCCGCATGATTGACTTTCATGGCTACATTTGGCCCCAACTACGTAGTTTTGAAGCC
CCTGTTTTAATAAATATATAGTAATTATGAATACTTTGTAAAAAACATAATTTTAGTGTC
GTTCAAGGCTGGTTCATATGCTTTGGAAATTAAAGGGAGATAAAATAAATTAATACTTCC
AAATTATCAAATTTTTAAATGTATTTCTAAGTCATATGATAAGGAGCTTAAAGCTTATCA
GTTCTATTATAGAAATGTAGGGAAATGTATGATAATCAATCGATTTCAAAATATTACCCT
TACTCAAAAACCATGTGTAGGCGAATCATAGATAAAACCAATAAAATCAATGGAATTTTC
ATTAACCTATTCAATAATAAAAA

consensusID : consensus_8010#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 138
fasta sequence

                              [GGCGGCCCGGCCGCTTGCCCGGGCGCCTCCGGTGGTCCGCTGGTTGCTGCTGGCCCGCTGGTTGGTGTTGTTTCGTGGGGCTCCGGTTGCGCTCCGGCCGGTTCTCCGGGCGTGTCCTCGCGGGTTGCCGTCGTCCGC]

[+] EMBL CNS09EQU             [GGCGGCCCGGCCGCTTGCCCGGGCGCCTCCGGTGGTCCGCTGGTTGCTGCTGGCCCGCTGGTTGGTGTTGTTTCGTGGGGCTCCGGTTGCGCTCCGGCCGGTTCTCCGGGCGTGTCCTCGCGGGTTGCCGTCGTCCGC]




>consensus_8010#1
GGCGGCCCGGCCGCTTGCCCGGGCGCCTCCGGTGGTCCGCTGGTTGCTGCTGGCCCGCTG
GTTGGTGTTGTTTCGTGGGGCTCCGGTTGCGCTCCGGCCGGTTCTCCGGGCGTGTCCTCG
CGGGTTGCCGTCGTCCGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8010#0      CCGCCCACGCGTCCGCGGACGCGTGGGGTTGAAATAAAACGTCAAAACAGTTAACGACTG 60
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CTCGATATCGCATATAGGCAAACACGGGGAAAAAATTGAGCATTATAACTAAACGACTGT 120
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      TGGTATGCATCGCATATGCTCTTGACAGTCATTTGTTAATTTTAACGACTGGTCCTATGC 180
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      GGTCGTTAAACAAACGAATGTCAAGAGCGTATCCGATGCAAGTTAACAGTCGTTTAGTTG 240
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      TACTGCTCGATTTTTTCCCCCGTGTTGGCCTATATGCCATTTTGAGCAGTCGTTAACTGT 300
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      TTTGACGATCGTTTATTTTAACAGGAATGAACAACAAATGAATTCGGTCAAACCAAAATG 360
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      AACTTTAAACGACTGTTAAAATGTGTTCATTTATTCGCGATGCCGGCTAATGTTCTATTC 420
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CACCGCACGCATTTTCATCGCATTTAAGAAGCTTTTTCATTAGCCGCGTTCAGACACGGC 480
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      ATATTCTGCCAGAAAATATCTGTCAAACACACTTTCTCACTGAGGTAGGGGAAGTCTAGC 540
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      AGCCTGTGGTGAATCTTTTTCAGGTAATGCAAGCTATCTATCGCTGGATGGATAACAAAA 600
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      ATATTTGCCTGCAATCTTTTGACAGGACGAGAAAAATATCGTGTTTTTCGTGTTTAAACA 660
consensus_8010#1      ---------------------------------------GGCGGCCCGGCCGCTTGCCCG 21
                                                              * *        * **   * 

consensus_8010#0      TTAGTTTTCGATTGCTTCCAAGTTTTCTATGTTCTAACGGTTGTATATTTTGCATTTCTT 720
consensus_8010#1      GGCGCCTCCGGTGGTCCGCTGGTTGCTGCTGGCCCGCTGGTTG-GTGTT----GTTTCGT 76
                         *  * ** * *    *  ***     **  *    *****  * **     **** *

consensus_8010#0      TCAACGATCGTTGTATTCTGGTAAGAT-TCGTGGTGTGTAAACGCAAAAATATTGGCGAA 779
consensus_8010#1      GGGGCTCCGGTTGCGCTCCGGCCGGTTCTCCGGGCGTGTCCTCGCGGGT-TGCCGTCGTC 135
                          *    ****   ** **   * * **  ** ****   ***     *   * **  

consensus_8010#0      TCTTTTTTGGACTTGTTTCTGGTGGAAGGGGAAAGTTTCGCGAATAAAGATATACCCAGT 839
consensus_8010#1      CGC--------------------------------------------------------- 138
                                                                                  

consensus_8010#0      ATTCTATTCAATGGTAAATTTTATTTTTATTTTTGAAACCTTCTATGAATCAGTACCTCA 899
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      TTTAAAGCTACTTTGAATGATTTAACACAGGGGTCTTCTAATTTTTCAGTTCACAGGCCG 959
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CATTGCTTCGCAAGTAGTGTTGTTGAGGGTCATTTTGGCTTTACTTTTAGTTAAACGAAA 1019
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      TTAAAAATCTTATTATTATAACAAATTTCAAACTGAAAATGTAATATTTCCACAGTTCTC 1079
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      TAATACTGACTTATACTTTTAGATCTCTAATACTTTTAGTGTCGTTTTAAAATAGTTAAA 1139
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      ATATATATTTTAATAAAAATTACTGATAATTATAAATTATTTCAACCTTTTCAAAGCAAT 1199
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CGCGAGCCGCATGATTGACTTTCATGGCTACATTTGGCCCCAACTACGTAGTTTTGAAGC 1259
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CCCTGTTTTAATAAATATATAGTAATTATGAATACTTTGTAAAAAACATAATTTTAGTGT 1319
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CGTTCAAGGCTGGTTCATATGCTTTGGAAATTAAAGGGAGATAAAATAAATTAATACTTC 1379
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CAAATTATCAAATTTTTAAATGTATTTCTAAGTCATATGATAAGGAGCTTAAAGCTTATC 1439
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      AGTTCTATTATAGAAATGTAGGGAAATGTATGATAATCAATCGATTTCAAAATATTACCC 1499
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      TTACTCAAAAACCATGTGTAGGCGAATCATAGATAAAACCAATAAAATCAATGGAATTTT 1559
consensus_8010#1      ------------------------------------------------------------
                                                                                  

consensus_8010#0      CATTAACCTATTCAATAATAAAAA 1583
consensus_8010#1      ------------------------