Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8021 cluster # 8021       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8021#0 length = 1267 sequences # 4  
consensus_8021#1 length = 739 sequences # 3  
consensus_8021#2 length = 690 sequences # 1  
consensus_8021#3 length = 662 sequences # 1  

consensusID : consensus_8021#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1267
fasta sequence
                              [TTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGTACACCCAGCCATCCCAGTCTACCCCTAGAAAAGTTTGTCTCATTGTGAAAAATCAATTCCCCCTCGTAGGCGCCACGCACGAATTGGTGCTGGAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACCACCAGCACCAGGGCGGCGGCGGAGGCGGTGGCTATCCCCAGCCGCAGATGGCGATGCATCAACCGTCCCAGGTGCACCAGCGGTTCGCGATGGCGCAGGGTGGCGTCGAACCGGGCGGTGGCGGTGACGGTGGCGGCGGCTACGACTACGGTGCGATGGCGCACCATCAGCAGCTGCCCGGCAACAGCAACGGCGGGGGCATGATGATGGCGAACGGGTCCGACGTGTCGGCCGTGCAGAACCGGTTAAGCAATATGCAGATCGTGGACGGTGGTGGCGATAATGGAAAGGAGTTTAATCATCACCATCAGCACCACCATCACCAGCAGCAGCCGCACCATCAGCAGTCGATGCATCATCAGCAGCACCGTGGCCAGCAGCACCACGGGTACCATCATCATCAGCCGCACCATCAGCAGCAGCATCAGCAGTATCCGTACGGCGGCGGCGGGCGGCGGCTACTCCAACAACCATCCGATGGCGATGGGAGGTGGTGGTGATCACCGGAAGTACAACAATGGTGGTGGGCAGCAAGCACCATCATCGC]

[+] EMBL BX606259             [TTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGTACACCCAGCCATCCCAGTCTACCCCTAGAAAAGTTTGTCTCATTGTGAAAAATCAATTCCCCCTCGTAGGCGCCACGCACGAATTGGTGCTGGAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACCACCAGCACCAGGGCGGCGGCGGAGGCGGTGGCTATCCCCAGCCGCAGATGGCGATGCATCAACCGTCCCAGGTGCACCAGCGGTTCGCGATGGCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM600323             [                                                                                                                                                                                                                                                                               ccgAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACCACCAGCACCAGGGCGGCGGCGGAGGCGGTGGCTATCCCCAGCCGCAGATGGCGATGCATCAACCGTCCCAGGTGCACCAGCGGTTCGCGATGGCGCAGGGTGGCGTCGAACCGGGCGGTGGCGGTGACGGTGGCGGCGGCTACGACTACGGTGCGATGGCGCACCATCAGCAGCTGCCCGGCAACAGCAACGGCGGGGGCATGATGATGGCGAACGGGTCCGACGTGTCGGCCGTGCAGAAC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM594851             [                                                                                                                                                                                                                                                                                                                                                                                                         ccGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGA  AAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACCACCAGCACCAGGGCGGCGGCGGAGGCGGTGGCTATCCCCAGCCGCAGATGGCGATGCATCAACCGTCCCAGGTGCACCAGCGGTTCGCGATGGTGCAGGGTGGCGTCGAACCGGGCGGTGGCGGTGACGGTGGCGGCGGCTACGACTACGGTGCGATGGCGCACCATCAGCAGCTGCCCGGCAACAGCAACGGCGGGGGCATGATGATGGCGAACGGGTCCGACGTGTCGGCCGTGCAGAACCGGTTAAGCAATATGCAGATCGTGGACGGTGGTGGCGATAATGGAAAGGAGTTTAATCATCACCATCAGCACCACCATCACCA                                                                                                                                                                                                                              ]
[+] EMBL BX626429             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACCACCAGCACCAGGGCGGCGGCGGAGGCGGTGGCTATCCCCAGCCGCAGATGGCGATGCATCAACCGTCCCAGGTGCACCAGCGGTTCGCGATGGCGCAGGGTGGCGTCGAACCGGGCGGTGGCGGTGACGGTGGCGGCGGCTACGACTACGGTGCGATGGCGCACCATCAGCAGCTGCCCGGCAACAGCAACGGCGGGGGCATGATGATGGCGAACGGGTCCGACGTGTCGGCCGTGCAGAACCGGTTAAGCAATATGCAGATCGTGGACGGTGGTGGCGATAATGGAAAGGAGTTTAATCATCACCATCAGCACCACCATCACCAGCAGCAGCCGCACCATCAGCAGTCGATGCATCATCAGCAGCACCGTGGCCAGCAGCACCACGGGTACCATCATCATCAGCCGCACCATCAGCAGCAGCATCAGCAGTATCCGTACGGCGGCGGCGGGCGGCGGCTACTCCAACAACCATCCGATGGCGATGGGAGGTGGTGGTGATCACCGGAAGTACAACAATGGTGGTGGGCAGCAAGCACCATCATCGC]


>consensus_8021#0 TTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGTACACCCAGCCATCCCAGTCTACC CCTAGAAAAGTTTGTCTCATTGTGAAAAATCAATTCCCCCTCGTAGGCGCCACGCACGAA TTGGTGCTGGAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCT GTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCC TAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGC AAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATC CTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAG TGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTA CTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTG ATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGACGATGGCGCAACAGA ACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAG AGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACC ACCAGCACCAGGGCGGCGGCGGAGGCGGTGGCTATCCCCAGCCGCAGATGGCGATGCATC AACCGTCCCAGGTGCACCAGCGGTTCGCGATGGCGCAGGGTGGCGTCGAACCGGGCGGTG GCGGTGACGGTGGCGGCGGCTACGACTACGGTGCGATGGCGCACCATCAGCAGCTGCCCG GCAACAGCAACGGCGGGGGCATGATGATGGCGAACGGGTCCGACGTGTCGGCCGTGCAGA ACCGGTTAAGCAATATGCAGATCGTGGACGGTGGTGGCGATAATGGAAAGGAGTTTAATC ATCACCATCAGCACCACCATCACCAGCAGCAGCCGCACCATCAGCAGTCGATGCATCATC AGCAGCACCGTGGCCAGCAGCACCACGGGTACCATCATCATCAGCCGCACCATCAGCAGC AGCATCAGCAGTATCCGTACGGCGGCGGCGGGCGGCGGCTACTCCAACAACCATCCGATG GCGATGGGAGGTGGTGGTGATCACCGGAAGTACAACAATGGTGGTGGGCAGCAAGCACCA TCATCGC



consensusID : consensus_8021#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 739
fasta sequence
                              [CCGAAACAGTTCGATGAAAAATTGTCAAGAAGCGAGAGAGGAAAAAGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGACGATGGCGCAACAGAACAACTA-CCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACCACCA]

[+] EMBL BM581560             [CCGAAACAGTTCGATGAAAAATTGTCAAGAAGCGAGAGAGGAAAAAGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCCGCGATGCGTCTACCGAGAAA                                                                                             ]
[+] EMBL BM627905             [                                           ccgGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGACGATGGCGCAACAGAACAACTA CCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACATCCTCCTTACCACCACCA]
[+] EMBL BM599529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgGATTTTCCAGACAGCAGTGTGCCCCTTCCGACGAAACCAGCGGGGACGATGGCGCAACAGAACAACTA CCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAACAT                 ]


>consensus_8021#1 CCGAAACAGTTCGATGAAAAATTGTCAAGAAGCGAGAGAGGAAAAAGAAAAGCTAATCAC GCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAG AAGAAACTGCAGTGCAGTGCAGAGGAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTGG CATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCG TCCTCCAACCTCCCCTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATACAT TGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACAC AATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGAAGG CAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTACGTT CCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAGGCC GATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGGGGA CGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGT CGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAACAAC ATCCTCCTTACCACCACCA



consensusID : consensus_8021#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence
                              [CCGCGGACGCGTGGGTGTCAAGAAGCAAGAGAGGAAAAAGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGTACACCCAGCCATCCCAGTCTACCCGTAGAAAAGTTTGTCTCACTGTGAAAAATCAATTCCTCCTCGCAGGCGCCACGCACGAATTGGTGCTGGTGGGTAGTGTGTGTGTGTGTAAAGATTGTGCGACACGCGTTACTTCGCCACGCGGTAGACCGAGGCGTGAAAAGAGCTGTGGTACAGAGAGAAAAAAATAAAACCCCGTCGGTGTTTGTTGATCGCAAAGGGAGGAGTGTAGTGTAGTGGTGCAGTGTGGCACAGCACGCGTACGGGAAGGCGGTCTTAGAGGCGGAAGTGAGAATCGCCCGAACCTCTATCGCGCTTGAATAAATAACACACTCCTTTGCCGTCACACAAACACGGGCACACGCACGCACGTACAACGCACGGTGCGCAATACGCAAATCGCGAAATACGCTCCCCAATCCCTTGAGGTTCGTCCTCGGTTGTTGTTAATCCTATGGTTATTCATTTCTACAGAGGAAAAAAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTC]

[+] EMBL BM582735             [CCGCGGACGCGTGGGTGTCAAGAAGCAAGAGAGGAAAAAGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGGTACACCCAGCCATCCCAGTCTACCCGTAGAAAAGTTTGTCTCACTGTGAAAAATCAATTCCTCCTCGCAGGCGCCACGCACGAATTGGTGCTGGTGGGTAGTGTGTGTGTGTGTAAAGATTGTGCGACACGCGTTACTTCGCCACGCGGTAGACCGAGGCGTGAAAAGAGCTGTGGTACAGAGAGAAAAAAATAAAACCCCGTCGGTGTTTGTTGATCGCAAAGGGAGGAGTGTAGTGTAGTGGTGCAGTGTGGCACAGCACGCGTACGGGAAGGCGGTCTTAGAGGCGGAAGTGAGAATCGCCCGAACCTCTATCGCGCTTGAATAAATAACACACTCCTTTGCCGTCACACAAACACGGGCACACGCACGCACGTACAACGCACGGTGCGCAATACGCAAATCGCGAAATACGCTCCCCAATCCCTTGAGGTTCGTCCTCGGTTGTTGTTAATCCTATGGTTATTCATTTCTACAGAGGAAAAAAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTC]


>consensus_8021#2 CCGCGGACGCGTGGGTGTCAAGAAGCAAGAGAGGAAAAAGAAAAGCTAATCACGCACGTC AGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAAC TGCAGTGCAGTGCAGAGGTACACCCAGCCATCCCAGTCTACCCGTAGAAAAGTTTGTCTC ACTGTGAAAAATCAATTCCTCCTCGCAGGCGCCACGCACGAATTGGTGCTGGTGGGTAGT GTGTGTGTGTGTAAAGATTGTGCGACACGCGTTACTTCGCCACGCGGTAGACCGAGGCGT GAAAAGAGCTGTGGTACAGAGAGAAAAAAATAAAACCCCGTCGGTGTTTGTTGATCGCAA AGGGAGGAGTGTAGTGTAGTGGTGCAGTGTGGCACAGCACGCGTACGGGAAGGCGGTCTT AGAGGCGGAAGTGAGAATCGCCCGAACCTCTATCGCGCTTGAATAAATAACACACTCCTT TGCCGTCACACAAACACGGGCACACGCACGCACGTACAACGCACGGTGCGCAATACGCAA ATCGCGAAATACGCTCCCCAATCCCTTGAGGTTCGTCCTCGGTTGTTGTTAATCCTATGG TTATTCATTTCTACAGAGGAAAAAAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAAT TCCATTCTGTGCTGTGATAGGAAATAGTTC



consensusID : consensus_8021#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 662
fasta sequence
                              [CCGAAGCAAGAGAGGAAAAAGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGAGGAAAAAAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGACTCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCGTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTGCGTTCCAATACACACCATACTCAAAAGCGAGCCAGCCGAAGTACAAAAAGGAACCCCAGAGGCCGATTTTCCAGACAGCAGTGTGCCCCTTCCGACGAAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAG]

[+] EMBL BM608820             [CCGAAGCAAGAGAGGAAAAAGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGAGGAAAAAAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGACTCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCGTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTGCGTTCCAATACACACCATACTCAAAAGCGAGCCAGCCGAAGTACAAAAAGGAACCCCAGAGGCCGATTTTCCAGACAGCAGTGTGCCCCTTCCGACGAAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAG]


>consensus_8021#3 CCGAAGCAAGAGAGGAAAAAGAAAAGCTAATCACGCACGTCAGAGGCAGAGCAACCTCCG GGCAACGTACGAGAATTGTGCAATTTGGTGAAAGAAGAAACTGCAGTGCAGTGCAGAGAG GAAAAAAAGTGTATAAAGTGAAAAGCTTTCAGTGGCATCAATTCCATTCTGTGCTGTGAT AGGAAATAGTTCGTTGCGTGGAATCGTCTTAATCGTCCTCCAACCTCCCCTAACGGTGAC TCGTGAGAAACGACGTAAAAAGGCAGAAAATACATTGTGCATGCTATAGCAAACCTGTAC GGGGGATACACCCATACAAAGCTACGCGCATACACAATCTAAGGTTAATCCTTGTGCATC TCAACGGGCGTTAGTTGAAGGGCGAGAAAAGAAGGCAGAAGTTCAACGAGTGTGGCCTAA CAGAGCACACACACACATACTGCATACCTTGCGTTCCAATACACACCATACTCAAAAGCG AGCCAGCCGAAGTACAAAAAGGAACCCCAGAGGCCGATTTTCCAGACAGCAGTGTGCCCC TTCCGACGAAACCAGCGGGGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTAC CGAGAAACGTCGTCCAGCTGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGC AG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8021#1      CCGAAACAGTTCGATGAAAAATTGTCAAGAAGCGAGAGAGGAAAAAGAAAAGCTAATCAC 60
consensus_8021#3      --------------------------CCGAAGCAAGAGAGGAAAAAGAAAAGCTAATCAC 34
consensus_8021#0      ---------TTTGGTGAAAGAAGAAACTGCAGT--GCAGTGCAGAGGTACACCCAGCCAT 49
consensus_8021#2      -------CCGCGGACGCGTGGGTGTCAAGAAGCAAGAGAGGAAAAAGAAAAGCTAATCAC 53
                                                  * **   *    * * * * * * * *  ** 

consensus_8021#1      GCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAG 120
consensus_8021#3      GCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAG 94
consensus_8021#0      CCCAGTCTACCCCTAGAAAAGTTTGTCTCATTGTGAAAAATCAATTCCCCCTCGT--AGG 107
consensus_8021#2      GCACGTCAGAGGCAGAGCAACCTCCGGGCAACGTACGAGAATTGTGCAATTTGGTGAAAG 113
                       *  ***     *     **  *     **  **   * *    * *    * **  * *

consensus_8021#1      AAGAAACTGCAGTGCAGTGCAGAG-GAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTG 179
consensus_8021#3      AAGAAACTGCAGTGCAGTGCAGAGAGGAAAAAAAGTGTATAAAGTGAAAAGCTTTCAGTG 154
consensus_8021#0      CGCCACGCACGAATTGGTGCTG---GAAAAAGAAGTGTATAAAGTGAAAAGCTTTCAGTG 164
consensus_8021#2      AAGAAACTGCAGTGCAGTGCAG----------AGGTACAC-------------------- 143
                          *    *      **** *          * **  *                     

consensus_8021#1      GCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATC 239
consensus_8021#3      GCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATC 214
consensus_8021#0      GCATCAATTCCATTCTGTGCTGTGATAGGAAATAGTTCGTTGCGTGGAATCGTCTTAATC 224
consensus_8021#2      CCAGCCATCCCAGTCTAC-CCGTAGAAAAGTTTGTCTCACTGTGAAAAATCAATTCCTCC 202
                       ** * ** *** ***   * **   *     *   **  ** *   ****   *    *

consensus_8021#1      GTCCTCCAACCTCCC-CTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATAC 298
consensus_8021#3      GTCCTCCAACCTCCC-CTAACGGTGACTCGTGAGAAACGACGTAAAAAGGCAGAAAATAC 273
consensus_8021#0      GTCCTCCAACCTCCC-CTAACGGTGACCCGTGAGAAACGACGTAAAAAGGCAGAAAATAC 283
consensus_8021#2      TCGCAGGCGCCACGCACGAATTGGTGCTGGTGGGTAGTG-TGTGTGTGTGTAAAGATTGT 261
                         *     ** * * * **  *   *  *** * *  *  **      * * * * *  

consensus_8021#1      ATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCG-CATA 357
consensus_8021#3      ATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCG-CATA 332
consensus_8021#0      ATTGTGCATGCTATAGCAAACCTGTACGGGGGATACACCCATACAAAGCTACGCG-CATA 342
consensus_8021#2      GCGACACGCGTTACTTCG---CCACGCGGTAGACCGAGGCGTGAAAAGAGCTGTGGTACA 318
                            *  * **   *    *    ***  **   *  * *  ****    * *  * *

consensus_8021#1      CACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGA 417
consensus_8021#3      CACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCGTTAGTTGAAGGGCGAGAAAAGA 392
consensus_8021#0      CACAATCTAAGGTTAATCCTTGTGCATCTCAACGGGCTTTAGTTGAAGGGCGAGAAAAGA 402
consensus_8021#2      GAGAGAAAAAAATAAAACCCCGTC----------GGTGTTTGTTGAT---CGCAAAGGGA 365
                       * *    **  * ** **  **           **  ** *****    **  **  **

consensus_8021#1      AGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTAC 477
consensus_8021#3      AGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTGC 452
consensus_8021#0      AGGCAGAAGTTCAACGAGTGTGGCCTAACAGAGCACACACACACATACTGCATACCTTAC 462
consensus_8021#2      GGAGTGTAGTGTAGTG-GTGCAGTGTGGCACAGCACGCGTACGGGAAGGCGGTCTTAGAG 424
                       *   * ***  *  * ***  *  *  ** ***** *  **    *     *       

consensus_8021#1      GTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAG 537
consensus_8021#3      GTTCCAATACACACCATACTCAAAAGCGAGCCAGCCGAAGTACAAAAAGGAACCCCAGAG 512
consensus_8021#0      GTTCCAATACACACCGTACTCAAAAGCGAGCAAGCCGAAGTACAAAAAGGAATCCCAGAG 522
consensus_8021#2      GCGGAAGTGAGAATCGC-CCGAACCTCTATCGCGCTTGAATAAATAACACACTCCTT--T 481
                      *    * *    * *   *  **   * * *  **   * ** * **   *  **     

consensus_8021#1      GCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGG 597
consensus_8021#3      GCCGATTT--------------TCCAGACAGCAGTGTGCCCCTTCCGACGAAACCAGCGG 558
consensus_8021#0      GCCGATTTGCTTTTGCTGATTCTCCGGACAGTAGTGTGTACCTCCCGAGGAAACCAGCGG 582
consensus_8021#2      GCCGTCACACAAACACGGG---CACACGCACGCACGTACAACGCACGGTGCGCAATACGC 538
                      ****                    *   **     **    *   **  *       ** 

consensus_8021#1      GGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGC 657
consensus_8021#3      GGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGC 618
consensus_8021#0      GGACGATGGCGCAACAGAACAACTACCCCGCGATGCGTCTACCGAGAAACGTCGTCCAGC 642
consensus_8021#2      AAATCGCGAAATACGCTCCCCAATCCCTTGAGGTTCGTCCTCGGTTGTTGTTAATCCTAT 598
                        *    *    *      * * * **  * * * ****  * *       *  ***   

consensus_8021#1      TGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAAC 717
consensus_8021#3      TGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAG---------------- 662
consensus_8021#0      TGTCGGTGGATGCGAAAGAGTTCGTACCGTTGATTAAGCAGCAGCCGCTACCGCAGCAAC 702
consensus_8021#2      GGTTATTCATTTCTACAGAGGAAAAAAAGTGTATAAAGTGAAAAGC-TTTCAGTGGCATC 657
                       **   *   * * * ****     *  **  ** ***    *                 

consensus_8021#1      AACATCCTCCT-TACCACCACCA------------------------------------- 739
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      AACATCCTCCT-TACCACCACCAGCACCAGGGCGGCGGCGGAGGCGGTGGCTATCCCCAG 761
consensus_8021#2      AATTCCATTCTGTGCTGTGATAGGAAATAGTTC--------------------------- 690
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      CCGCAGATGGCGATGCATCAACCGTCCCAGGTGCACCAGCGGTTCGCGATGGCGCAGGGT 821
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      GGCGTCGAACCGGGCGGTGGCGGTGACGGTGGCGGCGGCTACGACTACGGTGCGATGGCG 881
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      CACCATCAGCAGCTGCCCGGCAACAGCAACGGCGGGGGCATGATGATGGCGAACGGGTCC 941
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      GACGTGTCGGCCGTGCAGAACCGGTTAAGCAATATGCAGATCGTGGACGGTGGTGGCGAT 1001
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      AATGGAAAGGAGTTTAATCATCACCATCAGCACCACCATCACCAGCAGCAGCCGCACCAT 1061
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      CAGCAGTCGATGCATCATCAGCAGCACCGTGGCCAGCAGCACCACGGGTACCATCATCAT 1121
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      CAGCCGCACCATCAGCAGCAGCATCAGCAGTATCCGTACGGCGGCGGCGGGCGGCGGCTA 1181
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      ------------------------------------------------------------
consensus_8021#3      ------------------------------------------------------------
consensus_8021#0      CTCCAACAACCATCCGATGGCGATGGGAGGTGGTGGTGATCACCGGAAGTACAACAATGG 1241
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#1      --------------------------
consensus_8021#3      --------------------------
consensus_8021#0      TGGTGGGCAGCAAGCACCATCATCGC 1267
consensus_8021#2      --------------------------
                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)