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Anopheles gambiae
cluster # 8045 cluster # 8045       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8045#0 length = 1423 sequences # 8  
consensus_8045#1 length = 110 sequences # 1  

consensusID : consensus_8045#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1423
fasta sequence
                              [CCGGATTGTTTTGGTCTTTGCTCCTCCGGTCGCCTTACGGAGCCGCGGGATAGGCCGCCGAGTCAGCTGTTGACAATTGTCCGCATGGTGGTGGTGGCAGTGGCAAGCTTTCTCCTTATTAGTTAATTAAAACCAAACGAAGCTGTCAACATGCGTGAGCTGTACGACTTAATAACGGGCAAGAATGTTGACCATCAAACGTTCGAAAGCGTCTCGGCGATCATTCAGAAACGTTTCACCAATGCGGGCAACTGGTTCCAGGTCGGATCAGCGCTTGCTTTGCTGCTGCTGCAGAACGATCTCGCCCTTCCCTTTCACCGGCTGGCAGGGATCTACGTGTTGTACGACATCCGCCGCAAGGAGCAGGCGGAATCACCCTTCTTCCTGTTTTTGGCCCGCTTCCTAGAACCGTTCGGTGGACTGCTGCCGGCCAACAGCAGCACCCCCGCACAGATGGTGGAGCTGAAGTTCATTCATCTGCTACTATCGAACGGTGACCCAGACATTGACAAAAAGTCACCCCGCCTGTTCTGCCAAGCGTTTGCCGCAATGCCCACCCCGGTCGGGCCGGCCGAAATTGCGTACGTAAAGGCGAAGGCAGCGGAACGGCTGAAAGATTTCCCCCTCACCGTGCGCTCCAATGTGGCCAACATCATTCCCGCCCTGCCCGTGCTGCCTGGCCGCGAACCGGCACTGAAAAACTACACCGGAGCGGCCATCGAGGAGCTGGTGAACGGGATGACGGCGAACCCGAGCAATCCGCTGCTGAACGCGCTCGGTCCCACGTTCATGTCCGTGGCGCCACCGCTGCTCACGTGTGAGGATGAGCTGATCTGGCTCGATCTGGGCAGCCCCTCGTACCACAAGCCGGTGTACAATAGCTGCAGCGATGCGGAACCAACGCCGGACAAGTGCCTGCAGACGCTGCTGGACCAATCGTTCCGGCAGGCGCTCAGCATTGCCGACCAGCAGACGCTGGTGAACGAGCTGGAGAAGGACACGCAGCAGACGCACCTGTCGTGCGTCACGCCGGAAAAGCTCCCGAACCTGATCGAATACAACCCGACGATTGCGATCGAAATTCTGATGCGTATGCTGAAAACGCGCCACATCGATGCGTACCTGGACGTGATCGTCGACATGTAGCTGTCGCTGCACTCGATGGAGGTGGTGAACCGGCTGACCACGTCGGTCGATCTGCCGGTGCACTTCGTGCATCTGTACATCGTGAACAGCATCGGCACGTGCTCGACGATCCGGGACAAGTACATGCAGAACCGGCTGGTACGGTTGGTGTGCGTGTTCCTGCAGAGCCTGATCCGGAACAAGATCATCGACGTGAAGCAGCTGTACATCGAGATCGAAGCGTTTTGCATCGAGTTTAGCCGGATACGGGAGGCGGCCGCACTGTACCGTTTGCTGA]

[+] EMBL BM578727             [CCGGATTGTTTTGGTCTTTGCTCCTCCGGTCGCCTTACGGAGCCGCGGGATAGGCCGCCGAGTCAGCTGTTGACAATTGTCCGCATGGTGGTGGTGGCAGTGGCAAGCTTTCTCCTTATTAGTTAATTAAAACCAAACGAAGCTGCCAACATGCGTGAGCTGTACGACTTAATAACGGGCAAGAATGTTGACCATCAAACGTTCGAAAGCGTCTCGGCGATCATTCAGAAACGTTTCACCAATGCGGGCAACTGGTTCCAGGTCGGATCAGCGCTTGCTTTGCTGCTGCTGCAGAACGATCTCGCCCTTCCCTTTCACCGGCTGGCAGGGATCTACGTGCTGTACGACATCCGCCGCAAGGAGCAGGCGGAATCACCCTTCTTCCTGTTTTTGGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX623101             [           TGGTGTTTGCTCCTCCGGTCGCCTTACGGAGCCGCGGGATAGGCCGCCGAGTCAGCTGTTGACAATTGTCCGCATGGTGGTGGTGGCAGTGGCAAGCTTTCTCCTTATTAGTTAATTAAAACCAAACGAAGCTGTCAACATGCGTGAGCTGTACGACTTAATAACGGGCAAGAATGTTGACCATCAAACGTTCGAAAGCGTCTCGGCGATCATTCAGAAACGTTTCACCAATGCGGGCAACTGGTTCCAGGTCGGATCAGCGCTTGCTTTGCTGCTGCTGCAGAACGATCTCGCCCTTCCCTTTCACCGGCTGGCAGGGATCTACGTGTTGTACGACATCCGCCGCAAGGAGCAGGCGGAATCACCCTTCTTCCTGTTTTTGGCCCGCTTCCTAGAACCGTTCGGTGGACTGCTGCCGGCCAACAGCAGCACCCCCGCACAGATGGTGGAGCTGAAGTTCATTCATCTGCTACTATCGAACGGTGACCCAGACATTGACAAAAAGTCACCCCGCCTGTTCTGCCAAGCGTTTGCCGCAATGCCCACCCCGGTCGGGCCGGCCGAAATTGCGTACGTAAAGGCGAAGGCAGCGGAACGGCTGAAAGATTTCCCCCTCACCGTGCGCTCCAATGTGGNCAACATCATTCCCGCCCTGCCCGTGCTGCCTGGNCGCGAACCGGCACTGAAAAACTACACCGGAGCGGCCATCGAGGAGCTGGTGAACGGGATGACGGCGAACCCGAGCAATCCGCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08FE1             [                          CGGTCGCCTTACGGA CCGCGGGATAGGCCGCCGAGTCAGCTGTTGACAATTGTCCGCATGGTGGTGGTGGCAGTGGCAAGCTTTCTCCTTATTAGTTAATTAAAACCAAACGAAGCTGTCAACATGCGTGAG TGTACGACTTAATAACGGGCAAGAATGTTGACCATCAAACGTTCGAAAGCGTCTCGGCGATCATTCAGAAACGTTTCACCAATGCGGGCAACTGGTTCCAGGTCGGATCAGCGCTTGCTTTGCTGCTGCTGCAGAACGATCTCGCCCTTCCCTTTCACCGGCTGGCAGGGATCTACGTGTTGTACGACATCCGCCGCAAGGAGCAGGCGGAATCACCCTTCTTCCTGTTTTTGGCCCGCTTCCTAGAACCGTTCGGTGGACTGCTGCCGGCCAACAGCAGCACCCCCGCACAGATGGTGGAGCTGAAGTTCATTCATCTGCTACTATCGAACGGTGACCCAGACATTGACAAAAAGTCACCCCGCCTGTTCTGCCAAGCGTTTGCCGCAATGCCCACCCCGGTCGGGCCGGCCGAAATTGCGTACGTAAAGGCGAAGGCAGCGGAACGGCTGAAAGATTTCCCCCTCACCGTGCGCTCCAATGTGGCCAACATCATTCCCGCCCTGCCCGTGCTGCCTGGCCGCGAACCGGCACTGAAAAACTACACCGGAGCGGCCATCGAGGAGCTGGTGAACGGGATGACGGCGAACCCGAGCAATCCGCTGCTGAACGCGCTCGGTCCCACGTTCATGTCCGTGGCGCCACCGCTGCTCACGTGTGAGGATGAGCTGATCTGGCTCGATCTGGGCAGCCCCTCGTACCACAAGCCGGTGTACAATAGCTGCAGCGATGCGGAACCAACGCCGGACAAGTGCCTGCAGACGCTGCTGGACCAATCGTTCCGGCAGGCGCTCAGCATTGCCGACCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS09056             [                                                                                                                                           AAGCTGTCAACATGCGTGA CTGTACGACTTAATAACGGGCAAGAATGTTGACCATCAAACGTTCGAAAGCGTCTCGGCGATCATTCAGAAACGTTTCACCAATGCGGGCAACTGGTTCCAGGTCGGATCAGCGCTTGCTTTGCTGCTGCTGCAGAACGATCTCGCCCTTCCCTTTCACCGGCTGGCAGGGATCTACGTGTTGTACGACATCCGCCGCAAGGAGCAGGCGGAATCACCCTTCTTCCTGTTTTTGGCCCTCTTGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM617539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgAGCACCCCCGCACAGATGGTGGAGCTGAAGTTCATTCATCTGCTACTATCGAACGGTGATCCAGACATTGACAAAAAGTCACCCCGCCTGTTCTGCCAAGCGTTTGCCGCAATGCCCACCCCGGTCGGGCCGGCCGAAATTGCGTACGTAAAGGCGAAGGCAGCGGAACGGCTGAAAGATTTCCCCCTCACCGTGCGCTCCAATGTGGCCAACATCATTCCCGCCCTGCCCGTGCTGCCTGGCCGCGAACCGGCACTGAAAAACTACACCGGAGCGGCCATCGAGGAGCTGGTGAACGGGATGACGGCGAACCCGAGCAATCCGCTGCTGAACGCGCTCGGTCCCACGTTCATGTCCGTGGCGCCACCGCTGCTCACGTGTGAGGATGAGCTGATCTGGCTCGATCTGGGCAGCCCCTCGTACCACAAGCCGGTGTACAATAGCTGCAGCGATGCGGAACCAACGCCGGACAAGTGTCTGCAGACGCTGCTGGACCAATCGTTCCGGCAGGCGCTCAGCATTGCCGACCAGCAGACGCTGGTGAACGAGCTGGAGAAGGACACGCAGCAGACGCACCTGTCGTGCGTCACGCCGGAAAAGCTCCCGAACCTGATCGAATACAACCCGACGATTGCGATCGAAATTCTGATGCGTATGCTGAAAACGCGCC                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX608497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGTGCGCTCCAATGTGGCCAACATCATTCCCGCCCTGCCCGTGCTGCCTGGCCGCGAACCGGCACTGAAAAACTACACCGGAGCGGCCATCGAGGAGCTGGTGAACGGGATGACGGCGAACCCGAGCAATCCGCTGCTGAACGCGCTCGGTCCCACGTTCATGTCCGTGGCGCCACCGCTGCTCACGTGTGAGGATGAGCTGATCTGGCTCGATCTGGGCAGCCCCTCGTACCACAAGCCGGTGTACAATAGCTGCAGCGATGCGGAACCAACGCCGGACAAGTGCCTGCAGACGCTGCTGGACCAATCGTTCCGGCAGGCGCTCAGCATTGCCGACCAGCAGACGCTGGTGAACGAGCTGGAGAAGGACACGCAGCAGACGCACCTGTCGTGCGTCACGCCGGAAAAGCTCCCGAACCTGATCGAATACAACCCGACGATTGCGATCGAAATTCTGATGCGTATGCTGAAAACGCGCCACATCGATGCGTACCTGGACGTGATCGTCGACATGTAGCTGTCGCTGCACTCGATGGAGGTGGTGAACCGGCTGACCACGTCGGTCGATCTGCCGGTGCACTTCGTGCATCTGTACATCGTGAACAGCATCGGCACGTGCTCGACGATCCGGGACAAGTACATGCAGAACCGGCTGGTACGGTTGGTGTGCGTGTTCCTGCAGAGCCTGATCCGGAACAAGATCATCGACGTGAAGC                                                                              ]
[-] EMBL CNS09057             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGCATCTGTACATCGTGAACAGCATCGGCACGTGCTCGACGATCCGGGACAAGTACATGCAGAACCGGCTGGTACGGTTGGTGTGCGTGTTCCTGCAGAGCCTGATCCGGAACAAGATCATCGACGTGAAGCAGCTGTACATCGAGATCGAAGCGTTTTGCATCGAGTTTAGCCGGATACGGGAGGCGGCCGCACTGTACCGTTTGCTGA]
[-] EMBL CNS08FE2             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTACATCGTGAACAGCATCGGCACGTGCTCGACGATCCGGGAAAAGTACATGCAGAACCGGCTGGTACGGTTGGTGTGCGTGTTCCTGCAGAGCCTGATCCGGAACAAGATCATCGACGTGAAGCAGCTGTACATCGAGATCGAAGCGTTTTGCATCGAGTTTAGCCGGATACGGGAGGCGGCCGCACTGTACCGGTTG    ]


>consensus_8045#0 CCGGATTGTTTTGGTCTTTGCTCCTCCGGTCGCCTTACGGAGCCGCGGGATAGGCCGCCG AGTCAGCTGTTGACAATTGTCCGCATGGTGGTGGTGGCAGTGGCAAGCTTTCTCCTTATT AGTTAATTAAAACCAAACGAAGCTGTCAACATGCGTGAGCTGTACGACTTAATAACGGGC AAGAATGTTGACCATCAAACGTTCGAAAGCGTCTCGGCGATCATTCAGAAACGTTTCACC AATGCGGGCAACTGGTTCCAGGTCGGATCAGCGCTTGCTTTGCTGCTGCTGCAGAACGAT CTCGCCCTTCCCTTTCACCGGCTGGCAGGGATCTACGTGTTGTACGACATCCGCCGCAAG GAGCAGGCGGAATCACCCTTCTTCCTGTTTTTGGCCCGCTTCCTAGAACCGTTCGGTGGA CTGCTGCCGGCCAACAGCAGCACCCCCGCACAGATGGTGGAGCTGAAGTTCATTCATCTG CTACTATCGAACGGTGACCCAGACATTGACAAAAAGTCACCCCGCCTGTTCTGCCAAGCG TTTGCCGCAATGCCCACCCCGGTCGGGCCGGCCGAAATTGCGTACGTAAAGGCGAAGGCA GCGGAACGGCTGAAAGATTTCCCCCTCACCGTGCGCTCCAATGTGGCCAACATCATTCCC GCCCTGCCCGTGCTGCCTGGCCGCGAACCGGCACTGAAAAACTACACCGGAGCGGCCATC GAGGAGCTGGTGAACGGGATGACGGCGAACCCGAGCAATCCGCTGCTGAACGCGCTCGGT CCCACGTTCATGTCCGTGGCGCCACCGCTGCTCACGTGTGAGGATGAGCTGATCTGGCTC GATCTGGGCAGCCCCTCGTACCACAAGCCGGTGTACAATAGCTGCAGCGATGCGGAACCA ACGCCGGACAAGTGCCTGCAGACGCTGCTGGACCAATCGTTCCGGCAGGCGCTCAGCATT GCCGACCAGCAGACGCTGGTGAACGAGCTGGAGAAGGACACGCAGCAGACGCACCTGTCG TGCGTCACGCCGGAAAAGCTCCCGAACCTGATCGAATACAACCCGACGATTGCGATCGAA ATTCTGATGCGTATGCTGAAAACGCGCCACATCGATGCGTACCTGGACGTGATCGTCGAC ATGTAGCTGTCGCTGCACTCGATGGAGGTGGTGAACCGGCTGACCACGTCGGTCGATCTG CCGGTGCACTTCGTGCATCTGTACATCGTGAACAGCATCGGCACGTGCTCGACGATCCGG GACAAGTACATGCAGAACCGGCTGGTACGGTTGGTGTGCGTGTTCCTGCAGAGCCTGATC CGGAACAAGATCATCGACGTGAAGCAGCTGTACATCGAGATCGAAGCGTTTTGCATCGAG TTTAGCCGGATACGGGAGGCGGCCGCACTGTACCGTTTGCTGA



consensusID : consensus_8045#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 110
fasta sequence
                              [CAGAATCCCCCGAGGTNAACGAAGGGGATGTTGGTGTATGCTCCTCCGGTCGCCTTACGGAGCCGCGGGATAGCCGCCGAGTCAGCTGTTGGACAATTGTCGCCAAATTT]

[+] EMBL AL933401             [CAGAATCCCCCGAGGTNAACGAAGGGGATGTTGGTGTATGCTCCTCCGGTCGCCTTACGGAGCCGCGGGATAGCCGCCGAGTCAGCTGTTGGACAATTGTCGCCAAATTT]


>consensus_8045#1 CAGAATCCCCCGAGGTNAACGAAGGGGATGTTGGTGTATGCTCCTCCGGTCGCCTTACGG AGCCGCGGGATAGCCGCCGAGTCAGCTGTTGGACAATTGTCGCCAAATTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8045#0      --------------------CCGGATTGTTTTGGTCTTTGCTCCTCCGGTCGCCTTACGG 40
consensus_8045#1      CAGAATCCCCCGAGGTNAACGAAGGGGATGTTGGTGTATGCTCCTCCGGTCGCCTTACGG 60
                                             *    * ***** * **********************

consensus_8045#0      AGCCGCGGGATAGGCCGCCGAGTCAGCTGTTG-ACAATTGTCCGCATGGTGGTGGTGGCA 99
consensus_8045#1      AGCCGCGGGATAG-CCGCCGAGTCAGCTGTTGGACAATTGTCGCCAAATTT--------- 110
                      ************* ****************** *********  **   *          

consensus_8045#0      GTGGCAAGCTTTCTCCTTATTAGTTAATTAAAACCAAACGAAGCTGTCAACATGCGTGAG 159
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      CTGTACGACTTAATAACGGGCAAGAATGTTGACCATCAAACGTTCGAAAGCGTCTCGGCG 219
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      ATCATTCAGAAACGTTTCACCAATGCGGGCAACTGGTTCCAGGTCGGATCAGCGCTTGCT 279
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      TTGCTGCTGCTGCAGAACGATCTCGCCCTTCCCTTTCACCGGCTGGCAGGGATCTACGTG 339
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      TTGTACGACATCCGCCGCAAGGAGCAGGCGGAATCACCCTTCTTCCTGTTTTTGGCCCGC 399
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      TTCCTAGAACCGTTCGGTGGACTGCTGCCGGCCAACAGCAGCACCCCCGCACAGATGGTG 459
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      GAGCTGAAGTTCATTCATCTGCTACTATCGAACGGTGACCCAGACATTGACAAAAAGTCA 519
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      CCCCGCCTGTTCTGCCAAGCGTTTGCCGCAATGCCCACCCCGGTCGGGCCGGCCGAAATT 579
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      GCGTACGTAAAGGCGAAGGCAGCGGAACGGCTGAAAGATTTCCCCCTCACCGTGCGCTCC 639
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      AATGTGGCCAACATCATTCCCGCCCTGCCCGTGCTGCCTGGCCGCGAACCGGCACTGAAA 699
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      AACTACACCGGAGCGGCCATCGAGGAGCTGGTGAACGGGATGACGGCGAACCCGAGCAAT 759
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      CCGCTGCTGAACGCGCTCGGTCCCACGTTCATGTCCGTGGCGCCACCGCTGCTCACGTGT 819
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      GAGGATGAGCTGATCTGGCTCGATCTGGGCAGCCCCTCGTACCACAAGCCGGTGTACAAT 879
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      AGCTGCAGCGATGCGGAACCAACGCCGGACAAGTGCCTGCAGACGCTGCTGGACCAATCG 939
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      TTCCGGCAGGCGCTCAGCATTGCCGACCAGCAGACGCTGGTGAACGAGCTGGAGAAGGAC 999
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      ACGCAGCAGACGCACCTGTCGTGCGTCACGCCGGAAAAGCTCCCGAACCTGATCGAATAC 1059
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      AACCCGACGATTGCGATCGAAATTCTGATGCGTATGCTGAAAACGCGCCACATCGATGCG 1119
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      TACCTGGACGTGATCGTCGACATGTAGCTGTCGCTGCACTCGATGGAGGTGGTGAACCGG 1179
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      CTGACCACGTCGGTCGATCTGCCGGTGCACTTCGTGCATCTGTACATCGTGAACAGCATC 1239
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      GGCACGTGCTCGACGATCCGGGACAAGTACATGCAGAACCGGCTGGTACGGTTGGTGTGC 1299
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      GTGTTCCTGCAGAGCCTGATCCGGAACAAGATCATCGACGTGAAGCAGCTGTACATCGAG 1359
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      ATCGAAGCGTTTTGCATCGAGTTTAGCCGGATACGGGAGGCGGCCGCACTGTACCGTTTG 1419
consensus_8045#1      ------------------------------------------------------------
                                                                                  

consensus_8045#0      CTGA 1423
consensus_8045#1      ----
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)