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Anopheles gambiae
cluster # 8061 cluster # 8061       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8061#0 length = 1943 sequences # 7  
consensus_8061#1 length = 685 sequences # 1  
consensus_8061#2 length = 616 sequences # 1  

consensusID : consensus_8061#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1943
fasta sequence
                              [ACGCGCTCTGCCCCACGAACGACAGCGCCAACCTGCTGAAGGAGCTGGAATACAAGGATGACGATCGGCTCGCGCTCGAGCTGGGTCGCGTGCTGCGCAAGGGCGAGTATAAGCTGAACGTGAGCTACGTCAATGTGAACCAGATGACGGAGGAGATGGACAACACGCCGTCCCTGTGCAGCACGATCGTGAAGAACGGCGATCTGGTGGGCCAGATCAAGGCCGACATCCTGGCCAGCCTGCCGGCGGCGCTGGGCGAGGGCGCCAAGAAGTACGCTCACCTGCACTCGAACAACTGCCGATTGCGCCGCAAAGGCATCAAGTATCTGTCGACCTTGTACAAGGACGATGAGCGCATCGGGACCGACATCACCCTGCCGACGAATGCGGATGTATTTCTCCAAGAAGTCGATGATCTTGCCAGCCTCACACCGATCGATATTAACGACGTGGTGCTGCTGGTGAGAAGATGGCATCCGTCGGAAATGAAGCTAGGCAAATTCCAAGAAATCCTATTCACTGACAAACTTGAACTGACGAAACATCTGTCCCGAATCAGCGGCATCCCGGAGGAAAACATCGAGTACGTGAAGATACCACAGACCACGCTGCACCGGGACAGTGTGCTGAACATTCAGAACGGTTTGCACTGGGTGTCGACGCCCCAGCACGCCGATGACTGTCAAGTGTATAGCGTCGGCACGCTGCTTTACTACCGCGATAGTACGGAACAGCTGAAGGAGCTAACGCCCGAGGAGCGCAAAGAACTGACGAAGAAGGACAACCGGACCAGCTCGACGTACTCCCCGCGGAAGGAGCGTGCCCTCAAAATCTATCTGGACGCATCGCCCAAGAAGGCCGACGACTGATCATCATCATCGCCGTCGGACGGTGGAGACGTTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAGCGCCACACAGCGCAGCCTGCCCAGGAGACAGGAGAGACACACACTCTTCTCCGTTTAATTTATCGTTATCGTTTGCTGGCTGAAAGGAAAGGAAAGGGAAAAGATAAACCCCGCCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAAAGAAGATTGTGTATTTTCTCGCCCTTTCGCTCACTCACGCTGCCGATCATATGTAAGCCGATCTCGTCGACTGCTGCGCGCATCCCCGGTCTATATCGTATTAAAGTCAGTTGTGTTTATTTATCTTCTAATCTATAAAACGGCGCGCG-TC-TTTGTGGCATTGGGGTTTGTGATGCGACACGCAAGCAGAGAAAACAACAATTCAAATTAGCTGTAAGAGAGTGAGAGCGCGCAGAGAACAGTGGGGCGGGACAGGCTTATAATTTTGTTTGCGACACACTTTCCTCCCGCCGGCTGGGGAGAGACTGCCAAGCGCGGGAGGGTGATCATTTATTATTTACCTGTAGCTTGTGTGTATAGGGAAGTGAGTGAGTGAATGGTGACGCACAGTGAGACCGGGAAGTCGTTACAGTCGCCGGAAGACGGTTTTTTCGTTGATGTAGCCTTTTTTTGTTTGTTTCTTCGTATAAAAACTAGTTTAATGTACAATTAGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGGTCAGCATTTTTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGTTTTAGATTGTCCCGCCAATGCCCAATACTCCTACACGCACTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTGTTCTGTTTCTTTTATGAACAAAAGATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGTCGTGTGCGCATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTGTGTGAAACTTGTCTCGGAACGCTTTATGCTTTCGCGACTCCTCCGAAGGTGTGGACGGAAAGGATGCGGAAATGAAATTGCGC]

[+] EMBL BX607448             [ACGCGCTCTGCCCCACGAACGACAGCGCCAACCTGCTGAAGGAGCTGGAATACAAGGATGACGATCGGCTCGCGCTCGAGCTGGGTCGCGTGCTGCGCAAGGGCGAGTATAAGCTGAACGTGAGCTACGTCAATGTGAACCAGATGACGGAGGAGATGGACAACACGCCGTCCCTGTGCAGCACGATCGTGAAGAACGGCGATCTGGTGGGCCAGATCAAGGCCGACATCCTGGCCAGCCTGCCGGCGGCGCTGGGCGAGGGCGCCAAGAAGTACGCTCACCTGCACTCGAACAACTGCCGATTGCGCCGCAAAGGCATCAAGTATCTGTCGACCTTGTACAAGGACGATGAGCGCATCGGGACCGACATCACCCTGCCGACGAATGCGGATGTATTTCTCCAAGAAGTCGATGATCTTGCCAGCCTCACACCGATCGATATTAACGACGTGGTGCTGCTGGTGAGAAGATGGCATCCGTCGGAAATGAAGCTAGGCAAATTCCAAGAAATCCTATTCACTGACAAACTTGAACTGACGAAACATCTGTCCCGAATCAGCGGCATCCCGGAGGAAAACATCGAGTACGTGAAGATACCACAGACCACGCTGCACCGGGACAGTGTGCTGAACATTCAGAACGGTTTGCACTGGGTGTCGACGCCCCAGCACGCCGATGACTGTCAAGTGTATAGCGTCGGCACGCTGCTTTACTACCGCGATAGTACGGAACAGCTGAAGGAGCTAACGCCCGAGGAGCGCAAAGAACTGACGAAGAAGGACAACCGGACCAGCTCGACGTACTCCCCGCGGAAGGAGCGTGCCCTCAAAATCTATCTGGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX605256             [                                   CTGAAGGAGCTGGAATACAAGGATGACGATCGGCTCGCGCTCGAGCTGGGTCGCGGGCTGCGCAAGGGCGAGTATAAGCTGAACGTGAGCTACGTCAAGGTGAACAAGAAGACGGAGGAGATGGACAACACGGTGTCCCCGGGCAGCATGATCGTGAAGAACGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX620117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGACGAAGAAGGACAACCGGACCAGCTCGACGTACTCCCCGCGGAAGGAGCGTGCCCTCAAAATCTATCTGGACGCATCGCCCAAGAAGGCCGACGACTGATCATCATCATCGCCGTCGGACGGTGGAGACGTTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAGCGCCACACAGCGCAGCCTGCCCAGGAGACAGGAGAGACACACACTCTTCTCCGTTTAATTTATCGTTATCGTTTGCTGGCTGAAAGGAAAGGAAAGGGAAAAGATAAACCCCGCCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAAAGAAGATTGTGTATTTTCTCGCCCTTTCGCTCACTCACGCTGCCGATCATATGTAAGCCGATCTCGTCGACTGCTGCGCGCATCCCCGGTCTATATCGTATTAAAGTCAGTTGTGTTTATTTATCTTCTAATCTATAAAACGGCGCGCG TC TTTGTGGCATTGGGGTTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX627058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCCACACAGCGCAGCCTGCCCAGGAGACAGGAGAGACACACACTCTTCTCCGTTTAATTTATCGTTATCGTTTGCTGGCTGAAAGGAAAGGAAANGGAAAAGANAAACCCCGCCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAANGAAGATTGTGTATTTTCTCGCCCTTTCGCTCACTCACGCTGCCGATCATATGTAAGCCGATCTCGTCGACTGCTGCGCGCATCCCCGGTCTATATCGTATTAAAGTCAGGTGNGNTTATTTATCTTCTAATCTATAAAACGGCGCCCGTTCTTTTGTGGCATTGGGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BM595868             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACCCT TTCTCCGTTTAATTTATCGTTATCGTTTGCTGGCTGAAAGGAAAGGAAAGGGAAAAGATAAACCCCGCCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAAAGAAGATTGTGTATTTTCTCGCCCTTTCGCTCACTCACGCTGCCGATCATATGTAAGCCGATCTCGTCGACTGCAGCGCGCATCCCCGGTCTATATCGTATTAAAGTCAGTTGTGTTTATTTATCTTCTAATCTATAAAACGGCGCGCG TC TTTGTGGCATTGGGGTTTGTGATGCGACACGCAAGCAGAGAAAACAACAATTCAAATTAGCTGTAAGAGAGTGAGAGCGCGCAGAGAACAGTGGGGCGGGACAGGCTTATAATTTTGTTTGCGACACACTTTCCTCCCGCCGGCTGGGGAGAGACTGCCAAGCGCGGGAGGGTGATCATTTATTATTTACCTGTAGCTTGTGTGTATAGGGAAGTGAGTGAGTGAATGGTGACGCACAGTGAGACCGGGAAGTCGTTACAGTCGCCGGAAGACGGTTTTTTCGTTGATGTAGCCTTTTTTTGTTTGTTTCTTCGTATAAAAACTAGTTTAATGTACAAaaacgg                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX615267             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGGGGCGGGACAGGCTTATAATTTTGTTTGCGACACACTTTCCTCCCGCCGGCTGGGGAGAGACTGCCAAGCGCGGGAGGGTGATCATTTATTATTTACCTGTAGCTTGTGTGTATAGGGAAGTGAGTGAGTGAATGGTGACGCACAGTGAGACCGGGAAGTCGTTACAGTCGCCGGAAGACGGTTTTTTCGTTGATGTAGCCTTTTTTTGTTTGTTTTTTCGTATAAAAACTAGTTTAATGTACAATTTGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGGTCAGCATTTTTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGTTTTAGATTGTCCCGCCAATGCCCAATACTCCTACACGCACTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTGTTCTGTTTCTTTTATGAACAAAAGATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGTCGTGTGCGCATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTGTGTGAAACTTGTCTCGGAACGCTTTATGCTTTCGCGACTCCTCCGAAGGTGTGGACGGAAAGGATGCGGAA            ]
[+] EMBL BX609688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATAAAAACTAGTTTAAGGGACAATTGGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGGTCAGCATTTTTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGTTTTAGATTGTCCCGCCAATGCCCAATACTCCTACACGCACTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTGTTCTGTTTCTTTTATGAACAAAAGATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGTCGTGTGCGCATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTGTGTGAAACTTGTCTCGGAACGCTTTATGCTTTCGCGACTCCTCCCAAGGTGTGGACGGAAAGGATGCGGAAATGAAATTGCGC]


>consensus_8061#0 ACGCGCTCTGCCCCACGAACGACAGCGCCAACCTGCTGAAGGAGCTGGAATACAAGGATG ACGATCGGCTCGCGCTCGAGCTGGGTCGCGTGCTGCGCAAGGGCGAGTATAAGCTGAACG TGAGCTACGTCAATGTGAACCAGATGACGGAGGAGATGGACAACACGCCGTCCCTGTGCA GCACGATCGTGAAGAACGGCGATCTGGTGGGCCAGATCAAGGCCGACATCCTGGCCAGCC TGCCGGCGGCGCTGGGCGAGGGCGCCAAGAAGTACGCTCACCTGCACTCGAACAACTGCC GATTGCGCCGCAAAGGCATCAAGTATCTGTCGACCTTGTACAAGGACGATGAGCGCATCG GGACCGACATCACCCTGCCGACGAATGCGGATGTATTTCTCCAAGAAGTCGATGATCTTG CCAGCCTCACACCGATCGATATTAACGACGTGGTGCTGCTGGTGAGAAGATGGCATCCGT CGGAAATGAAGCTAGGCAAATTCCAAGAAATCCTATTCACTGACAAACTTGAACTGACGA AACATCTGTCCCGAATCAGCGGCATCCCGGAGGAAAACATCGAGTACGTGAAGATACCAC AGACCACGCTGCACCGGGACAGTGTGCTGAACATTCAGAACGGTTTGCACTGGGTGTCGA CGCCCCAGCACGCCGATGACTGTCAAGTGTATAGCGTCGGCACGCTGCTTTACTACCGCG ATAGTACGGAACAGCTGAAGGAGCTAACGCCCGAGGAGCGCAAAGAACTGACGAAGAAGG ACAACCGGACCAGCTCGACGTACTCCCCGCGGAAGGAGCGTGCCCTCAAAATCTATCTGG ACGCATCGCCCAAGAAGGCCGACGACTGATCATCATCATCGCCGTCGGACGGTGGAGACG TTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAGCGCCACACAGCGCAGCCTGCCC AGGAGACAGGAGAGACACACACTCTTCTCCGTTTAATTTATCGTTATCGTTTGCTGGCTG AAAGGAAAGGAAAGGGAAAAGATAAACCCCGCCACATGGCAGGCGCGGGATGATGGAACA CTGGCTTGGAGAAAGAAGATTGTGTATTTTCTCGCCCTTTCGCTCACTCACGCTGCCGAT CATATGTAAGCCGATCTCGTCGACTGCTGCGCGCATCCCCGGTCTATATCGTATTAAAGT CAGTTGTGTTTATTTATCTTCTAATCTATAAAACGGCGCGCGTCTTTGTGGCATTGGGGT TTGTGATGCGACACGCAAGCAGAGAAAACAACAATTCAAATTAGCTGTAAGAGAGTGAGA GCGCGCAGAGAACAGTGGGGCGGGACAGGCTTATAATTTTGTTTGCGACACACTTTCCTC CCGCCGGCTGGGGAGAGACTGCCAAGCGCGGGAGGGTGATCATTTATTATTTACCTGTAG CTTGTGTGTATAGGGAAGTGAGTGAGTGAATGGTGACGCACAGTGAGACCGGGAAGTCGT TACAGTCGCCGGAAGACGGTTTTTTCGTTGATGTAGCCTTTTTTTGTTTGTTTCTTCGTA TAAAAACTAGTTTAATGTACAATTAGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGG TCAGCATTTTTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGTTTTAGATTGTCCCG CCAATGCCCAATACTCCTACACGCACTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTG TTCTGTTTCTTTTATGAACAAAAGATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGT CGTGTGCGCATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTG TGTGAAACTTGTCTCGGAACGCTTTATGCTTTCGCGACTCCTCCGAAGGTGTGGACGGAA AGGATGCGGAAATGAAATTGCGC



consensusID : consensus_8061#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence
                              [AGAATCGCCCGAGNTTTTTCGTATAAAACTAGTTTAATGTACAATTTGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGGTCAGCATTTTTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGGTTTTAGATTGTCCCGCCAATGCCCAATACTCCTACACGCACTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTGTTCTGTTTCTTTTATGAACAAAAGATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGTCGTGTGCGCATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTGTGTGAAACTTGTCTCGGAACGCTTTATGCTTTCGCGAATCCTCCGAAGGTGTGGACGGAAAGGATGCGGAAATGAAATTGCGCGCGCATACCCTANATAATTGCTCAAAGAATAATATTGAATCGTATTATGCTTGTGGGCGGGCNCGGTTGGGCCGAGCAGAGCAGGCGATATGGTCGCTGTGATAAGCGAAAACGGCGCGCGCGCGCGGANAGCTTTGCGGNAATGNAAGAAACACCANGCAANAAGAAACACACTCAGGACAAACACAGCAGGAAAGAGCTAGTAAAAACGTACCCGGTAGGCAATAGACGATGCGCAAACTCAGATTGGNGCTATATTACTCTGNGCACGGGTAGGCN]

[+] EMBL AL934869             [AGAATCGCCCGAGNTTTTTCGTATAAAACTAGTTTAATGTACAATTTGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGGTCAGCATTTTTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGGTTTTAGATTGTCCCGCCAATGCCCAATACTCCTACACGCACTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTGTTCTGTTTCTTTTATGAACAAAAGATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGTCGTGTGCGCATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTGTGTGAAACTTGTCTCGGAACGCTTTATGCTTTCGCGAATCCTCCGAAGGTGTGGACGGAAAGGATGCGGAAATGAAATTGCGCGCGCATACCCTANATAATTGCTCAAAGAATAATATTGAATCGTATTATGCTTGTGGGCGGGCNCGGTTGGGCCGAGCAGAGCAGGCGATATGGTCGCTGTGATAAGCGAAAACGGCGCGCGCGCGCGGANAGCTTTGCGGNAATGNAAGAAACACCANGCAANAAGAAACACACTCAGGACAAACACAGCAGGAAAGAGCTAGTAAAAACGTACCCGGTAGGCAATAGACGATGCGCAAACTCAGATTGGNGCTATATTACTCTGNGCACGGGTAGGCN]


>consensus_8061#1 AGAATCGCCCGAGNTTTTTCGTATAAAACTAGTTTAATGTACAATTTGTATCGCCCTTTT GTTTCTGGCCAGCCGTCAATGGTCAGCATTTTTTTGTATTCGGTTTTTTCTTTCCTTTCT TTCCTTGGTTTTAGATTGTCCCGCCAATGCCCAATACTCCTACACGCACTACTAATCCCT GTTGCGTTAAAGCGAATGCCTTGTTCTGTTTCTTTTATGAACAAAAGATTATCTTCGGTG TGTGCGTGTGTGTGTGTTTGTGTCGTGTGCGCATGTGACCTGGAATGATTATCGCTCTGG CGCGGACAAGGAGCAGAGAAGTGTGTGAAACTTGTCTCGGAACGCTTTATGCTTTCGCGA ATCCTCCGAAGGTGTGGACGGAAAGGATGCGGAAATGAAATTGCGCGCGCATACCCTANA TAATTGCTCAAAGAATAATATTGAATCGTATTATGCTTGTGGGCGGGCNCGGTTGGGCCG AGCAGAGCAGGCGATATGGTCGCTGTGATAAGCGAAAACGGCGCGCGCGCGCGGANAGCT TTGCGGNAATGNAAGAAACACCANGCAANAAGAAACACACTCAGGACAAACACAGCAGGA AAGAGCTAGTAAAAACGTACCCGGTAGGCAATAGACGATGCGCAAACTCAGATTGGNGCT ATATTACTCTGNGCACGGGTAGGCN



consensusID : consensus_8061#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 616
fasta sequence
                              [AATCCCCGAGGTTAAACAGCTGAAGGAGCTAACGCCCGAGGAGCGCAAAGAACTGACGAAGAAGGACAACCGGACAGCTCGACGTACTCCCCGCGGAAGGAGCGTGCCCTCAAAATCTATCTGGACGCATCTGCCAAGAAGGCCTGACGACTGATCATCATCATCGCCGTCGGACGGTGGAGACTGTTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAGACGCCACACAGCGCAGCCTGCCCAGGAGACAGGAGAGACACACACTCTTCTCCGTTTAATTTATCGTTATCGTTTTGCTGGCTGAAAGTGAAACGGAAAGGGAAAAGATAAANCCCGGCCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAAAGAAGATTAGTGTATTTTCTCGCCCTTTCGCTCACTCACGCTGCCGATCATATGTAAGCCGATCTCGTCGACTGCTGCGCGCATCCCCGGTCTATATCGTATTAACAGTCAGTTGTGTTATTTATCTTCTAATCTATAAAACGGCGCGCGTCTTTGTGGCATTGGGGTTTGTGAGTGCGACACGCAAGCCNGCAGAAAACAANAATTCAAATTACCTGTACNGAGAGTGAGA]

[+] EMBL AL932259             [AATCCCCGAGGTTAAACAGCTGAAGGAGCTAACGCCCGAGGAGCGCAAAGAACTGACGAAGAAGGACAACCGGACAGCTCGACGTACTCCCCGCGGAAGGAGCGTGCCCTCAAAATCTATCTGGACGCATCTGCCAAGAAGGCCTGACGACTGATCATCATCATCGCCGTCGGACGGTGGAGACTGTTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAGACGCCACACAGCGCAGCCTGCCCAGGAGACAGGAGAGACACACACTCTTCTCCGTTTAATTTATCGTTATCGTTTTGCTGGCTGAAAGTGAAACGGAAAGGGAAAAGATAAANCCCGGCCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAAAGAAGATTAGTGTATTTTCTCGCCCTTTCGCTCACTCACGCTGCCGATCATATGTAAGCCGATCTCGTCGACTGCTGCGCGCATCCCCGGTCTATATCGTATTAACAGTCAGTTGTGTTATTTATCTTCTAATCTATAAAACGGCGCGCGTCTTTGTGGCATTGGGGTTTGTGAGTGCGACACGCAAGCCNGCAGAAAACAANAATTCAAATTACCTGTACNGAGAGTGAGA]


>consensus_8061#2 AATCCCCGAGGTTAAACAGCTGAAGGAGCTAACGCCCGAGGAGCGCAAAGAACTGACGAA GAAGGACAACCGGACAGCTCGACGTACTCCCCGCGGAAGGAGCGTGCCCTCAAAATCTAT CTGGACGCATCTGCCAAGAAGGCCTGACGACTGATCATCATCATCGCCGTCGGACGGTGG AGACTGTTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAGACGCCACACAGCGCAG CCTGCCCAGGAGACAGGAGAGACACACACTCTTCTCCGTTTAATTTATCGTTATCGTTTT GCTGGCTGAAAGTGAAACGGAAAGGGAAAAGATAAANCCCGGCCACATGGCAGGCGCGGG ATGATGGAACACTGGCTTGGAGAAAGAAGATTAGTGTATTTTCTCGCCCTTTCGCTCACT CACGCTGCCGATCATATGTAAGCCGATCTCGTCGACTGCTGCGCGCATCCCCGGTCTATA TCGTATTAACAGTCAGTTGTGTTATTTATCTTCTAATCTATAAAACGGCGCGCGTCTTTG TGGCATTGGGGTTTGTGAGTGCGACACGCAAGCCNGCAGAAAACAANAATTCAAATTACC TGTACNGAGAGTGAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8061#0      ACGCGCTCTGCCCCACGAACGACAGCGCCAACCTGCTGAAGGAGCTGGAATACAAGGATG 60
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      ACGATCGGCTCGCGCTCGAGCTGGGTCGCGTGCTGCGCAAGGGCGAGTATAAGCTGAACG 120
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      TGAGCTACGTCAATGTGAACCAGATGACGGAGGAGATGGACAACACGCCGTCCCTGTGCA 180
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      GCACGATCGTGAAGAACGGCGATCTGGTGGGCCAGATCAAGGCCGACATCCTGGCCAGCC 240
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      TGCCGGCGGCGCTGGGCGAGGGCGCCAAGAAGTACGCTCACCTGCACTCGAACAACTGCC 300
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      GATTGCGCCGCAAAGGCATCAAGTATCTGTCGACCTTGTACAAGGACGATGAGCGCATCG 360
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      GGACCGACATCACCCTGCCGACGAATGCGGATGTATTTCTCCAAGAAGTCGATGATCTTG 420
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      CCAGCCTCACACCGATCGATATTAACGACGTGGTGCTGCTGGTGAGAAGATGGCATCCGT 480
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      CGGAAATGAAGCTAGGCAAATTCCAAGAAATCCTATTCACTGACAAACTTGAACTGACGA 540
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      AACATCTGTCCCGAATCAGCGGCATCCCGGAGGAAAACATCGAGTACGTGAAGATACCAC 600
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      AGACCACGCTGCACCGGGACAGTGTGCTGAACATTCAGAACGGTTTGCACTGGGTGTCGA 660
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      CGCCCCAGCACGCCGATGACTGTCAAGTGTATAGCGTCGGCACGCTGCTTTACTACCGCG 720
consensus_8061#2      ---------------------------------------------------AAT-CCCCG 8
consensus_8061#1      ------------------------------AGAATCGCCCGAGNTTTTTCGTATAAAACT 30
                                                                           *    * 

consensus_8061#0      ATAGTACGGAACAGCTGAAGGAGC----TAACGCCCGAGGAGC-GCAAAGAACTGACGAA 775
consensus_8061#2      AGGTTA---AACAGCTGAAGGAGC----TAACGCCCGAGGAGC-GCAAAGAACTGACGAA 60
consensus_8061#1      AGTTTAATGTACAATTTGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGGTCAGCATT 90
                      *   **    ***  *      **    *     * *   *** *  **       *   

consensus_8061#0      GAAGGACAACCGGACC-AGCTCGACGTACTCCCCGCGGAA--GGAGCGTGCCCTCAAAAT 832
consensus_8061#2      GAAGGACAACCGGAC--AGCTCGACGTACTCCCCGCGGAA--GGAGCGTGCCCTCAAAAT 116
consensus_8061#1      TTTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGGTTTTAGATTGTCCCGCCAATGC 150
                             *  ***      **   * * **  **  **     **  ** **  ***   

consensus_8061#0      CTA-----TCTGGACGCATCGCCCAAG----AAGGCC-GACGACTGAT-CATCATCATCG 881
consensus_8061#2      CTA-----TCTGGACGCATCTGCCAAG----AAGGCCTGACGACTGAT-CATCATCATCG 166
consensus_8061#1      CCAATACTCCTACACGCA-CTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTGTTCTGT 209
                      * *      **  ***** *  * **        **   *   *  ** * *  *  *  

consensus_8061#0      CCGTCGGACGGTGGAGAC-GTTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAG-C 939
consensus_8061#2      CCGTCGGACGGTGGAGACTGTTGTCGTCAGCAAGCGAAAGAAAATCTGTCCCTAGGAGAC 226
consensus_8061#1      TTCTTTTATGAACAAAAG-ATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGTCGTGT 268
                         *   * *    * *   ** ** ** *   * *   *    * ***   *       

consensus_8061#0      GC-CACACAGCGCAGCCTGCCCAGGA----GACAGGAGAGACACACACTCTTCTCCGTTT 994
consensus_8061#2      GC-CACACAGCGCAGCCTGCCCAGGA----GACAGGAGAGACACACACTCTTCTCCGTTT 281
consensus_8061#1      GCGCATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTGTGTGA 328
                      ** **     *   *  **   *       * *  *    *    **      *  **  

consensus_8061#0      AATTTATCGTT-ATCGTTT-GCTGGCTGAAAGGAAA--GGAAAGGGAAAAGATAAACCCC 1050
consensus_8061#2      AATTTATCGTT-ATCGTTTTGCTGGCTGAAAGTGAAACGGAAAGGGAAAAGATAAANCCC 340
consensus_8061#1      AACTTGTCTCGGAACGCTTTATGCTTTCGCGAATCCTCCGAAGGTGTGGACGGAAAGGAT 388
                      ** ** **    * ** **       *            *** * *   *   ***    

consensus_8061#0      G-CCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAAAGAAGATT-GTGTATT 1108
consensus_8061#2      GGCCACATGGCAGGCGCGGGATGATGGAACACTGGCTTGGAGAAAGAAGATTAGTGTATT 400
consensus_8061#1      GCGGAAATGA-AATTGCGCGCGCATACCCTANATAATTGCTCAAAGAATAATATTGAATC 447
                      *   * ***  *   *** *   **     *     ***   ****** * *  ** ** 

consensus_8061#0      TTCTCGCCCTTTCGCTCACTCACGCT---GCCGATCATATGTAAGCCGATCTCGTCGACT 1165
consensus_8061#2      TTCTCGCCCTTTCGCTCACTCACGCT---GCCGATCATATGTAAGCCGATCTCGTCGACT 457
consensus_8061#1      GTATTATGCTTGTGGGCGGGCNCGGTTGGGCCGAGCAGA-GCAGGC-GATATGGTCG-CT 504
                       * *    ***  *  *   * ** *   ***** ** * * * ** *** * **** **

consensus_8061#0      GCTGCGCGCATCCCCGGTCTATATCGTATTAA-AGT----CAGTTGTGTTT-ATTTATCT 1219
consensus_8061#2      GCTGCGCGCATCCCCGGTCTATATCGTATTAACAGT----CAGTTGTGTT--ATTTATCT 511
consensus_8061#1      GTGATAAGCGAAAACGGCGCGCG-CGCGCGGANAGCTTTGCGGNAATGNAAGAAACACCA 563
                      *      **     ***       **     * **     * *   **    *   * * 

consensus_8061#0      TCTAATCTATAAAACGGCGCGCGTCTTTGTGGCATTG--GGGTTTGTGA-TGCG-ACACG 1275
consensus_8061#2      TCTAATCTATAAAACGGCGCGCGTCTTTGTGGCATTG--GGGTTTGTGAGTGCG-ACACG 568
consensus_8061#1      NGCAANAAGAAACACACTCAGGACAAACACAGCAGGAAAGAGCTAGTAAAAACGTACCCG 623
                         **     ** **     *          ***     * * * ** *   ** ** **

consensus_8061#0      CAAGCAG--AGAAAA--CAACAATTCAAATTAGCTGTA--AGAGAGTGAGAGCGCGCAGA 1329
consensus_8061#2      CAAGCCNGCAGAAAA--CAANAATTCAAATTACCTGTAC-NGAGAGTGAGA--------- 616
consensus_8061#1      GTAGGCAATAGACGATGCGCAAACTCAGATTGGNGCTATATTACTCTGNGCACGGGTAGG 683
                        **     ***  *  *   ** *** ***     **    *   ** *          

consensus_8061#0      GAACAGTGGGGCGGGACAGGCTTATAATTTTGTTTGCGACACACTTTCCTCCCGCCGGCT 1389
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      CN---------------------------------------------------------- 685
                                                                                  

consensus_8061#0      GGGGAGAGACTGCCAAGCGCGGGAGGGTGATCATTTATTATTTACCTGTAGCTTGTGTGT 1449
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      ATAGGGAAGTGAGTGAGTGAATGGTGACGCACAGTGAGACCGGGAAGTCGTTACAGTCGC 1509
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      CGGAAGACGGTTTTTTCGTTGATGTAGCCTTTTTTTGTTTGTTTCTTCGTATAAAAACTA 1569
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      GTTTAATGTACAATTAGTATCGCCCTTTTGTTTCTGGCCAGCCGTCAATGGTCAGCATTT 1629
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      TTTTGTATTCGGTTTTTTCTTTCCTTTCTTTCCTTGTTTTAGATTGTCCCGCCAATGCCC 1689
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      AATACTCCTACACGCACTACTAATCCCTGTTGCGTTAAAGCGAATGCCTTGTTCTGTTTC 1749
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      TTTTATGAACAAAAGATTATCTTCGGTGTGTGCGTGTGTGTGTGTTTGTGTCGTGTGCGC 1809
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      ATGTGACCTGGAATGATTATCGCTCTGGCGCGGACAAGGAGCAGAGAAGTGTGTGAAACT 1869
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      TGTCTCGGAACGCTTTATGCTTTCGCGACTCCTCCGAAGGTGTGGACGGAAAGGATGCGG 1929
consensus_8061#2      ------------------------------------------------------------
consensus_8061#1      ------------------------------------------------------------
                                                                                  

consensus_8061#0      AAATGAAATTGCGC 1943
consensus_8061#2      --------------
consensus_8061#1      --------------
                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)