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Anopheles gambiae
cluster # 8073 cluster # 8073       Sequences # 9       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8073#0 length = 1077 sequences # 4  
consensus_8073#1 length = 777 sequences # 1  
consensus_8073#2 length = 769 sequences # 1  
consensus_8073#3 length = 652 sequences # 1  
consensus_8073#4 length = 458 sequences # 1  
consensus_8073#5 length = 338 sequences # 1  

consensusID : consensus_8073#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1077
fasta sequence
                              [CCGGGGCGGGTTCCTGTATAAAGCAATGAGGTGCCCACTCCGCTCACCTAGATGGGGAAGCACTGGGGAATAGAGGAGAATATATTCTAAAACTTTGATGTTTCTTTACTGTTAACGTATGGAAGACGTATGGATGTGTGTGTGTGGGTGTGTAGCAACTTGTAGTGATTTAGAGGTTTAAAACCTGCCCCGCTCCCCTTCCATTCAAGGAAGCAAGATTGAAAGTAAAACAAGCAAAGAAATGAAATGGGAAAAGGGGAAAGATGACAAACTAACAGCTGAAAATGATGGGGCACTTAGAAGAAGTAGGAAAAAGAATGCGAAAGCAGTACATGTATGTGTTGAGTGGTCAAAATAAACTGAAAATCAAACTCTGAAACCAATGAACGACGTAATATTGCAAGATGATGTGAAACGGAACTTGTAACTTGTAACTTTATCTAGCAGCGCCGCAACTGCACACTATACATTACGGATTTACACACACACACATACACCTCAACATGAATACACACCTACACACGAACACACTCACAGTTATGCAAGGCGAGTGATTTGGAAGTCTTCTCATAAAAAAGGCAAAAGCGAAACAAAAAAGCAAGAAAAAGGCTGTCAATCTCTGAACCCACTACGCAAGAGCTGCGCTGCTCTGCTGTAGTAATTACTCGTACCATACGTTGTGTCTCTCGCCATGATTATTTATCCTCCGTCACGGAGCGACTATTGCAAGTATGGATGGAACGCAGAAACCGTGCCCATGGGACTAAACCCATCAGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTGGGTTGACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGTATAGCCGCTACTTAAACTAGGTCGATGTCCCCATTCATGTTTATCATCGCAGGAATACCACGTACGGTTAAAAGCTCCGTAAACCCATATTCACAACATCCGCACATCCACTCTGTATAACACTTGTACTC-AAAAGAGCAGCTCTCGACGAATTT-CACGCAGCAGAAGGAACCCGAGCGAGGAACAAAAGTAACATACGCTCAAAA]

[+] EMBL BM614368             [CCGGGGCGGGTTCCTGTATAAAGCAATGAGGTGCCCACTCCGCTCACCTAGATGGGGAAGCACTGGGGAATAGAGGAGAATATATTCTAAAACTTTGATGTTTCTTTACTGTTAACGTATGGAAGACGTATGGATGTGTGTGTGTGGGTGTGTAGCAACTTGTAGTGATTTAGAGGTTTAAAACCTGCCCCGCTCCCCTTCCATTCAAGGAAGCAAGATTGAAAGTAAAACAAGCAAAGAAATGAAATGGGAAAAGGGGAAAGATGACAAACTAACAGCTGAAAATGATGGGGCACTTAGAAGAAGTAGGAAAAAGAATGCGAAAGCAGTACATGTATGTGTTGAGTGGTCAAAATAAACTGAAAATCAAACTCTGAAACCAATG ACGACGTAATATTGCAAGAAGTTGTGAAACGGAACTTGTAACTTGTAACTTTATCTAGCAGCGCCGCAACTGCACACTATACATTACGGATTTACACACACACACAca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX616169             [                                                                                                                                                                                                                                                                    AAGATGACAAACTAACAGCTGAAAATGATGGGGCACTTAGAAGAAGTAGGAAAAAGAATGCGAAAGCAGTACATGTATGTGTTGAGTGGTCAAAATAAACTGAAAATCAAACTCTGAAACCAATGAACGACGTAATATTGCAAGATGATGTGAAACGGAACTTGTAACTTGTAACTTTATCTAGCAGCGCCGCAACTGCACACTATACATTACGGATTTACACACACACACATACACCTCAACATGAATACACACCTACACACGAACACACTCACAGTTATGCAAGGCGAGTGATTTGGAAGTCTTCTCATAAAAAAGGCAAAAGCGAAACAAAAAAGCAAGAAAAAGGCTGTCAATCTCTGAACCCACTACGCAAGAGCTGCGCTGCTCTGCTGTAGTAATTACTCGTACCATACGTTGTGTCTCTCGCCATGATTATTTATCCTCCGTCACGGAGCGACTATTGCAAGTATGGATGGAACGCAGAAACCGTGCCCATGGGACTAAACCCATCAGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTGGGTTGACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGTATAGCCGCTACTTAAACTAGGTCGATGTCCCCATTCATGTTTATCATCGCAGGAATACCACGTACGGTTAAAAGCTCCGTAAACCCATATTCACAACATCCGCACATCCACTCTGTATAACACTTGTACTC AAAAGAGCAGCTCTCGACGAATTT CACGCA                                             ]
[+] EMBL BX609505             [                                                                                                                                                                                                                                                                                                                           GAATGCGAAAGCAGTACATGTATGTGTTGAGTGGTCAAAATAAACTGAAAATCAAACTCTGAAACCAATGAACGACGTAATATTTCAAGATGATGTGAAACGGAACTTGTAACTTGTAACTTTATCTAGCAGCGCCGCAACTGCACACTATACATTACGGATTTACACACACACACATACACCTCAACATGAATACACACCTACACACGAACACACTCACAGTTATGCAAGGCGAGTGATTTGGAAGTCTTCTCATAAAAAAGGCAAAAGCGAAACAAAAAAGCAAGAAAAAGGCTGTCAATCTCTGAACCCACTACGCAAGAGCTGCGCTGCTCTGCTGTAGTAATTACTCGTACCATACGTTGTGTCTCTCGCCATGATTATTTATCCTCCGTCACGGAGCGACTATTGCAAGTATGGATGGAACGCAGAAACCTTGCCCATGGGACTAAACCCATCAGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTG                                                                                                                                                                                                                                                         ]
[+] EMBL BX609866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAGCTGCGCTGCTCTGCTGTAGTAATTACTCGTACCATACGTTGTGTCTCTCGCCATGATTATTTATCCTCCGTCACGGAGCGACTATTGCAAGTATGGATGGAACGCAGAAACCGTGCCCATGGGACTAAACCCATCAGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTGGGTTGACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGTATAGCCGCTACTTAAACTAGGTCGATGTCCCCATTCATGTTTATCATCGCAGGAATACCACGTACGGTTAAAAGCTCCGTAAACCCATATTCACAACATCCGCACATCCACTCTGTATAACACTTGTACTCAAAAAGAGCAGCTCTCGACGAATTTACACGCAGCAGAAGGAACCCGAGCGAGGAACAAAAGTAACATACGCTCAAAA]


>consensus_8073#0 CCGGGGCGGGTTCCTGTATAAAGCAATGAGGTGCCCACTCCGCTCACCTAGATGGGGAAG CACTGGGGAATAGAGGAGAATATATTCTAAAACTTTGATGTTTCTTTACTGTTAACGTAT GGAAGACGTATGGATGTGTGTGTGTGGGTGTGTAGCAACTTGTAGTGATTTAGAGGTTTA AAACCTGCCCCGCTCCCCTTCCATTCAAGGAAGCAAGATTGAAAGTAAAACAAGCAAAGA AATGAAATGGGAAAAGGGGAAAGATGACAAACTAACAGCTGAAAATGATGGGGCACTTAG AAGAAGTAGGAAAAAGAATGCGAAAGCAGTACATGTATGTGTTGAGTGGTCAAAATAAAC TGAAAATCAAACTCTGAAACCAATGAACGACGTAATATTGCAAGATGATGTGAAACGGAA CTTGTAACTTGTAACTTTATCTAGCAGCGCCGCAACTGCACACTATACATTACGGATTTA CACACACACACATACACCTCAACATGAATACACACCTACACACGAACACACTCACAGTTA TGCAAGGCGAGTGATTTGGAAGTCTTCTCATAAAAAAGGCAAAAGCGAAACAAAAAAGCA AGAAAAAGGCTGTCAATCTCTGAACCCACTACGCAAGAGCTGCGCTGCTCTGCTGTAGTA ATTACTCGTACCATACGTTGTGTCTCTCGCCATGATTATTTATCCTCCGTCACGGAGCGA CTATTGCAAGTATGGATGGAACGCAGAAACCGTGCCCATGGGACTAAACCCATCAGAGGA GTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTGGGTTGACAGC TGGTGTCACTCTGCCACATCCGTTACTAGGTATAGCCGCTACTTAAACTAGGTCGATGTC CCCATTCATGTTTATCATCGCAGGAATACCACGTACGGTTAAAAGCTCCGTAAACCCATA TTCACAACATCCGCACATCCACTCTGTATAACACTTGTACTCAAAAGAGCAGCTCTCGAC GAATTTCACGCAGCAGAAGGAACCCGAGCGAGGAACAAAAGTAACATACGCTCAAAA



consensusID : consensus_8073#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 777
fasta sequence
                              [CAGAATCGCCCCGAGGTGTTGNAACACACGGGANACAAGAACAATTGCAATGTTGCTGGTAAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAACATATACATATAATGGATACAACTTACATATAAAACCGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACATATATACATATATACATATAATATACATCCGTAGACGTATTATACAGGAGTCATCCAAATGTTCGTAGTTTGAGGCAAACGTCCGTTAGACGCCCGGCAATGTGTTAGAGAGAGAGAGAGTGGCGGGGGGAGGATACAATGAACAGGGGACAGGAAACCCTGCCCAGGGCGGGTTCCTGTATAAAGCAATGAGGTGCCCACTCCGCTCACCTAGATGGGGAAGCACTGGGGCAATAGAGGAGAATATATTCTAAAACTTTGATGTTTCTTTACTGTCAACGTATGGCAAGACGCATGGATGTGTAGTAGTAGTNGGGTGTGTAGCAACTTNGTACTGATTCTACNAGCGTTCTAAAATCTGCCCCGCTCCCCCGTCCATTCAAGANACAGCAACGCATNGAANNGTAAAACAAGCAAACGAAATGANACCTGCGCGCACAACAGGGCGCAACAGCATTGCACCNAACACCTAACACCACGCCTGACACACCACCTGGACCTCGCGGGGCCACCCTTTACGCACACGCCANANGTACGGANACACACAAGACACTGCCGN]

[+] EMBL AL931464             [CAGAATCGCCCCGAGGTGTTGNAACACACGGGANACAAGAACAATTGCAATGTTGCTGGTAAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAACATATACATATAATGGATACAACTTACATATAAAACCGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACATATATACATATATACATATAATATACATCCGTAGACGTATTATACAGGAGTCATCCAAATGTTCGTAGTTTGAGGCAAACGTCCGTTAGACGCCCGGCAATGTGTTAGAGAGAGAGAGAGTGGCGGGGGGAGGATACAATGAACAGGGGACAGGAAACCCTGCCCAGGGCGGGTTCCTGTATAAAGCAATGAGGTGCCCACTCCGCTCACCTAGATGGGGAAGCACTGGGGCAATAGAGGAGAATATATTCTAAAACTTTGATGTTTCTTTACTGTCAACGTATGGCAAGACGCATGGATGTGTAGTAGTAGTNGGGTGTGTAGCAACTTNGTACTGATTCTACNAGCGTTCTAAAATCTGCCCCGCTCCCCCGTCCATTCAAGANACAGCAACGCATNGAANNGTAAAACAAGCAAACGAAATGANACCTGCGCGCACAACAGGGCGCAACAGCATTGCACCNAACACCTAACACCACGCCTGACACACCACCTGGACCTCGCGGGGCCACCCTTTACGCACACGCCANANGTACGGANACACACAAGACACTGCCGN]


>consensus_8073#1 CAGAATCGCCCCGAGGTGTTGNAACACACGGGANACAAGAACAATTGCAATGTTGCTGGT AAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAA CATATACATATAATGGATACAACTTACATATAAAACCGCGGGAATAGGTGTCCAGAACTG GATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACATATATACATATATACATATAAT ATACATCCGTAGACGTATTATACAGGAGTCATCCAAATGTTCGTAGTTTGAGGCAAACGT CCGTTAGACGCCCGGCAATGTGTTAGAGAGAGAGAGAGTGGCGGGGGGAGGATACAATGA ACAGGGGACAGGAAACCCTGCCCAGGGCGGGTTCCTGTATAAAGCAATGAGGTGCCCACT CCGCTCACCTAGATGGGGAAGCACTGGGGCAATAGAGGAGAATATATTCTAAAACTTTGA TGTTTCTTTACTGTCAACGTATGGCAAGACGCATGGATGTGTAGTAGTAGTNGGGTGTGT AGCAACTTNGTACTGATTCTACNAGCGTTCTAAAATCTGCCCCGCTCCCCCGTCCATTCA AGANACAGCAACGCATNGAANNGTAAAACAAGCAAACGAAATGANACCTGCGCGCACAAC AGGGCGCAACAGCATTGCACCNAACACCTAACACCACGCCTGACACACCACCTGGACCTC GCGGGGCCACCCTTTACGCACACGCCANANGTACGGANACACACAAGACACTGCCGN



consensusID : consensus_8073#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 769
fasta sequence
                              [GCCAGAATCGCGCACGAGGTGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTGGGTTGACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGTATAGCCGCTACTTAAACTAGGTCGATGTCCCCATTCATGTTTATCATCGCAGGAATACCACGTACGGTTAAAAGCTCCGTAAACCCATATTCACAACATCCGCGACATCCACTCTGTATAACACTTGTACTCAAAAAGAGCAGCTCTCGACGGAATTTACACGCAGCAGGAAGGAACCCGAGCGAGGAACAAAAGTAACATACACTCAAAACAAACAAACAAACAAACAAACCAAAAAAGAAAACAAACGAAGTATTCTATTCACTGGACAATCTTTGACTACGATCAAAACTAGGTACTATTTACTTCTACCTATTGCAGCTGCTGCTACTACTTCCACTACGTAAAATGCAAACCTGTAAGCAAGACGGGAAGGCAANAGTAGAAGCNAGATGAGACATCGAACCCCAGTTACCCCGCGTTCCCAACTCCCCCATGTAAATCAAGCAGAGGGACAANGGTTGTACAAAGCGGAAANCGGGGTTGAATCGTNGGTATAAGGTGTAAAGAAGTTATTAGCAAACNTCCAAGCCGGTCAGGTGAAATCGTTAAGCCAGTATCCCACGTTTGGGGANTTGCGATCTTAGTACTGCATAACANCAGTACACACCATGCACACCGANNTATAGCGCAGGACANCNAANGTTGACAAN]

[+] EMBL BX468824             [GCCAGAATCGCGCACGAGGTGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTGGGTTGACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGTATAGCCGCTACTTAAACTAGGTCGATGTCCCCATTCATGTTTATCATCGCAGGAATACCACGTACGGTTAAAAGCTCCGTAAACCCATATTCACAACATCCGCGACATCCACTCTGTATAACACTTGTACTCAAAAAGAGCAGCTCTCGACGGAATTTACACGCAGCAGGAAGGAACCCGAGCGAGGAACAAAAGTAACATACACTCAAAACAAACAAACAAACAAACAAACCAAAAAAGAAAACAAACGAAGTATTCTATTCACTGGACAATCTTTGACTACGATCAAAACTAGGTACTATTTACTTCTACCTATTGCAGCTGCTGCTACTACTTCCACTACGTAAAATGCAAACCTGTAAGCAAGACGGGAAGGCAANAGTAGAAGCNAGATGAGACATCGAACCCCAGTTACCCCGCGTTCCCAACTCCCCCATGTAAATCAAGCAGAGGGACAANGGTTGTACAAAGCGGAAANCGGGGTTGAATCGTNGGTATAAGGTGTAAAGAAGTTATTAGCAAACNTCCAAGCCGGTCAGGTGAAATCGTTAAGCCAGTATCCCACGTTTGGGGANTTGCGATCTTAGTACTGCATAACANCAGTACACACCATGCACACCGANNTATAGCGCAGGACANCNAANGTTGACAAN]


>consensus_8073#2 GCCAGAATCGCGCACGAGGTGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAA ATGTACTAACAGTTGGGTTGACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGTATAG CCGCTACTTAAACTAGGTCGATGTCCCCATTCATGTTTATCATCGCAGGAATACCACGTA CGGTTAAAAGCTCCGTAAACCCATATTCACAACATCCGCGACATCCACTCTGTATAACAC TTGTACTCAAAAAGAGCAGCTCTCGACGGAATTTACACGCAGCAGGAAGGAACCCGAGCG AGGAACAAAAGTAACATACACTCAAAACAAACAAACAAACAAACAAACCAAAAAAGAAAA CAAACGAAGTATTCTATTCACTGGACAATCTTTGACTACGATCAAAACTAGGTACTATTT ACTTCTACCTATTGCAGCTGCTGCTACTACTTCCACTACGTAAAATGCAAACCTGTAAGC AAGACGGGAAGGCAANAGTAGAAGCNAGATGAGACATCGAACCCCAGTTACCCCGCGTTC CCAACTCCCCCATGTAAATCAAGCAGAGGGACAANGGTTGTACAAAGCGGAAANCGGGGT TGAATCGTNGGTATAAGGTGTAAAGAAGTTATTAGCAAACNTCCAAGCCGGTCAGGTGAA ATCGTTAAGCCAGTATCCCACGTTTGGGGANTTGCGATCTTAGTACTGCATAACANCAGT ACACACCATGCACACCGANNTATAGCGCAGGACANCNAANGTTGACAAN



consensusID : consensus_8073#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 652
fasta sequence
                              [CCGCGCGAAAAGAAACCACAGAACCTGTTTAAAACGTGAAGCAAAACAAAAAAAAAAAAAAAGAGAAAGATACCGTTATAATTATTATAACCTTGTTATTCGAGTATTGTTGAGCCTTATCTCGGTTTTTGTGTTTTCACAATAATGAAAAGGAGTGGTGGTAGGATGAGGTGGTAGACATCAATTCAATGTTCTGATATATACAAGTCGAATCTGTTTGGATATGTAATTAATTTGTAAGAACGTTTTACCCGACGCGGATTGGGCACACACACACACACATACATACACACATCCACACATTTGTGGTGCGAAAGTGTGCGAACATACCTACACACATCCACACATTTGTGGTGCGAAAGTGTGCGAACATACCTACAAAAACCAAAACAAAAAAAAAACAAAAAACAAAAACAGTGGAAAAGGGAAAAAGAAAATTGCAATGTTGCTGGTAAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAACATATACATATAATGGATACAACTTACATATAAAACTGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACATATATACATATATACATATAATATACATCCGTAGACGTATT]

[+] EMBL BM651002             [CCGCGCGAAAAGAAACCACAGAACCTGTTTAAAACGTGAAGCAAAACAAAAAAAAAAAAAAAGAGAAAGATACCGTTATAATTATTATAACCTTGTTATTCGAGTATTGTTGAGCCTTATCTCGGTTTTTGTGTTTTCACAATAATGAAAAGGAGTGGTGGTAGGATGAGGTGGTAGACATCAATTCAATGTTCTGATATATACAAGTCGAATCTGTTTGGATATGTAATTAATTTGTAAGAACGTTTTACCCGACGCGGATTGGGCACACACACACACACATACATACACACATCCACACATTTGTGGTGCGAAAGTGTGCGAACATACCTACACACATCCACACATTTGTGGTGCGAAAGTGTGCGAACATACCTACAAAAACCAAAACAAAAAAAAAACAAAAAACAAAAACAGTGGAAAAGGGAAAAAGAAAATTGCAATGTTGCTGGTAAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAACATATACATATAATGGATACAACTTACATATAAAACTGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACATATATACATATATACATATAATATACATCCGTAGACGTATT]


>consensus_8073#3 CCGCGCGAAAAGAAACCACAGAACCTGTTTAAAACGTGAAGCAAAACAAAAAAAAAAAAA AAGAGAAAGATACCGTTATAATTATTATAACCTTGTTATTCGAGTATTGTTGAGCCTTAT CTCGGTTTTTGTGTTTTCACAATAATGAAAAGGAGTGGTGGTAGGATGAGGTGGTAGACA TCAATTCAATGTTCTGATATATACAAGTCGAATCTGTTTGGATATGTAATTAATTTGTAA GAACGTTTTACCCGACGCGGATTGGGCACACACACACACACATACATACACACATCCACA CATTTGTGGTGCGAAAGTGTGCGAACATACCTACACACATCCACACATTTGTGGTGCGAA AGTGTGCGAACATACCTACAAAAACCAAAACAAAAAAAAAACAAAAAACAAAAACAGTGG AAAAGGGAAAAAGAAAATTGCAATGTTGCTGGTAAGCGGCAGCAGTAAAGGAACAAACAA AAATCCCACGCCGATGCGCACCTAATTACTGAACATATACATATAATGGATACAACTTAC ATATAAAACTGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTGCAAACGTTGTAA GAATCTATACATATATACATATATACATATAATATACATCCGTAGACGTATT



consensusID : consensus_8073#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 458
fasta sequence
                              [CCGCAAACAAACAAACAAACAAAAAAGAAAACAAACGAAGTATTCTATTCACTGGACAATCTTTGACTACGATCAAAACTAGTACTATTACTTCTACTATTGCAGCTGCTGCTACTACTTCCACTACTAAATGCAAACTGTAAGCAAACGGAAGCAAATAAACAAATGAAATCGAACCCCAGTTCCCCCGCTTCCCACTCCCCCTGTAAATCAACAAAGGAAAAGGTTGTAAAAGCGAAACGGCTGAATGTTGTATAAGTGTAAAGAATTATTAGCAACTCCAACCGTCAGTGAATCGTTAGCTGTATCCACGTTTTGGATGCGATCTATACTGCATACACAGTACACACATGCACACAAATATACACAGACACACTGACACGCCCTACAAACGAAGATTTCAGCTGACACTTGGCTATACTAAGCGGATACTATGAATCAGTTGCTTACTCGTAAAG]

[+] EMBL BM653042             [CCGCAAACAAACAAACAAACAAAAAAGAAAACAAACGAAGTATTCTATTCACTGGACAATCTTTGACTACGATCAAAACTAGTACTATTACTTCTACTATTGCAGCTGCTGCTACTACTTCCACTACTAAATGCAAACTGTAAGCAAACGGAAGCAAATAAACAAATGAAATCGAACCCCAGTTCCCCCGCTTCCCACTCCCCCTGTAAATCAACAAAGGAAAAGGTTGTAAAAGCGAAACGGCTGAATGTTGTATAAGTGTAAAGAATTATTAGCAACTCCAACCGTCAGTGAATCGTTAGCTGTATCCACGTTTTGGATGCGATCTATACTGCATACACAGTACACACATGCACACAAATATACACAGACACACTGACACGCCCTACAAACGAAGATTTCAGCTGACACTTGGCTATACTAAGCGGATACTATGAATCAGTTGCTTACTCGTAAAG]


>consensus_8073#4 CCGCAAACAAACAAACAAACAAAAAAGAAAACAAACGAAGTATTCTATTCACTGGACAAT CTTTGACTACGATCAAAACTAGTACTATTACTTCTACTATTGCAGCTGCTGCTACTACTT CCACTACTAAATGCAAACTGTAAGCAAACGGAAGCAAATAAACAAATGAAATCGAACCCC AGTTCCCCCGCTTCCCACTCCCCCTGTAAATCAACAAAGGAAAAGGTTGTAAAAGCGAAA CGGCTGAATGTTGTATAAGTGTAAAGAATTATTAGCAACTCCAACCGTCAGTGAATCGTT AGCTGTATCCACGTTTTGGATGCGATCTATACTGCATACACAGTACACACATGCACACAA ATATACACAGACACACTGACACGCCCTACAAACGAAGATTTCAGCTGACACTTGGCTATA CTAAGCGGATACTATGAATCAGTTGCTTACTCGTAAAG



consensusID : consensus_8073#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 338
fasta sequence
                              [AATTAATTTGTAAGAACGTTTTACCCGACGCGGATTGGGCACACACACACACATACACACATCCACACATTTGTGGTGCGAAAGTGTGCGAACATACCTACAAAAACCAAAACAAAAAAAAAAAAAACAAAAAACAAAAACAGTGGAAAAGGGAAAAAGAAAATTGCAATGTTGCTGGTAAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAACATATACATATAATGGATACAACTTACATATAAAACCGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACAT]

[+] EMBL BX610992             [AATTAATTTGTAAGAACGTTTTACCCGACGCGGATTGGGCACACACACACACATACACACATCCACACATTTGTGGTGCGAAAGTGTGCGAACATACCTACAAAAACCAAAACAAAAAAAAAAAAAACAAAAAACAAAAACAGTGGAAAAGGGAAAAAGAAAATTGCAATGTTGCTGGTAAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAACATATACATATAATGGATACAACTTACATATAAAACCGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACAT]


>consensus_8073#5 AATTAATTTGTAAGAACGTTTTACCCGACGCGGATTGGGCACACACACACACATACACAC ATCCACACATTTGTGGTGCGAAAGTGTGCGAACATACCTACAAAAACCAAAACAAAAAAA AAAAAAACAAAAAACAAAAACAGTGGAAAAGGGAAAAAGAAAATTGCAATGTTGCTGGTA AGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTACTGAAC ATATACATATAATGGATACAACTTACATATAAAACCGCGGGAATAGGTGTCCAGAACTGG ATGGTAGTACAGTGCAAACGTTGTAAGAATCTATACAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8073#3      ------------------------------------------------------------
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      ------------------------------------------------------------
consensus_8073#2      ----GCCAGAATCGCGCACGAGGTGAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTA 56
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      CCGGGGCGGGTTCCTGTATAAAGCAATGAGGTGCCCACTCCGCTCACCTAGATGGGGAAG 60
                                                                                  

consensus_8073#3      ------------------------------------------------------------
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      ------------------------------------------------------------
consensus_8073#2      CCAAATGTACTAACAGTTGGGTTGACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGT 116
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      CACTGGGGAATAGAGGAGAATATATTCTAAAACTTTGATGTTTCTTTACTGTTAACGTAT 120
                                                                                  

consensus_8073#3      ------------------------------CCGCGCGAAAAGAAACCACAGAACCTGTTT 30
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      -----CAGAATCGCCCCGAGGTGTTGNAACACACGGGANACAAGAACAATTGCAATGTTG 55
consensus_8073#2      ATAGCCGCTACTTAAACTAGGTCGATGTCCCCATTCATGTTTATCATCGCAGGAATACCA 176
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      GGAAGACGTATGGATGTGTGTGTGTGGGTGTGTAGCAACTTGTAGTGATTTAGAGGTTTA 180
                                                                                  

consensus_8073#3      AAAACGTGAAGCAAAACAAAAAAAAAAAAAAAGAGAAAGATACCGTTATAATTATTATAA 90
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      CTGGTAAGCGGCAGCAGTAAAGGAACAAACAAAAATCCCACGCCGATGCGCACCTAATTA 115
consensus_8073#2      CGTACGGTTAAAAGCTCCGTAAACCCATATTCACAACATCCGCGACATCCACTCTGTATA 236
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      AAACCTGCCCCGCTCCCCTTCCATTCAAGGAAGCAAGATTGAAAGTAAAACAAGCAAAGA 240
                                                                                  

consensus_8073#3      CCTTGT-TATTCGAGTATTGT-TGAGCCTTATCTCGGTTTTTGTGTTTTCACAATAATGA 148
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      CTGAACATATACATATAATGGATACAACTTACATATAAAACCGCGGGAATAGGTGTCCAG 175
consensus_8073#2      ACACTTGTACTCAAAAAGAGCAGCTCTCGACGGAATTTACACGCAGCAGGAAGGAACCCG 296
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      AATGAAATGGGAAAAGGGGAAAGATGACAAACTAACAGCTGAAAATGATGGGGCACTTAG 300
                                                                                  

consensus_8073#3      AAAGGAGTGGTGGTAGGATG---AGGTGGTAGACATCAATT---CA-ATGTTCTGATATA 201
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      AACTGGATGGTAGTACAGTGCAAACGTTGTAAGAATCTATA---CATATATACATATATA 232
consensus_8073#2      AGCGAGGAACAAAAGTAACATACACTCAAAACAAACAAACA---AACAAACAAACCAAAA 353
consensus_8073#4      --------------------------------CCGCAAACA---AACAAACAAAC-AAAA 24
consensus_8073#0      AAGAAGTAGGAAAAAGAATGCGAAAGCAGTACATGTATGTGTTGAGTGGTCAAAATAAAC 360
                                                                                  

consensus_8073#3      TACAAGTCGAATCTGTTTGGATATGTAATT---AATTTGTAAGAACGTT--------TTA 250
consensus_8073#5      --------------------------AATT---AATTTGTAAGAACGTT--------TTA 23
consensus_8073#1      CATATAATATACATCCGTAGACGTATTATACAGGAGTCATCCAAATGTT------CGTAG 286
consensus_8073#2      AAGAAAACAAACGAAGTATTCTATTCACTGGACAATCTTTGACTACGAT------CAAAA 407
consensus_8073#4      AAGAAAACAAACGAAGTATTCTATTCACTGGACAATCTTTGACTACGAT------CAAAA 78
consensus_8073#0      TGAAAATCAAACTCTGAAACCAATGAACGACGTAATATTGCAAGATGATGTGAAACGGAA 420
                                                        *         * * *           

consensus_8073#3      CCCGACGCGGATTGGGCACACACACA----CACACATACATACACACATCCACACATTTG 306
consensus_8073#5      CCCGACGCGGATTGGGCACACACACA----CAC------ATACACACATCCACACATTTG 73
consensus_8073#1      TTTGAGGCAAACGTCCGTTAGACGCC----CGGCAATGTGT-TAGAGAGAGAGAGAGTGG 341
consensus_8073#2      CTAGGTACTATTTACTTCTACCTAT-----TGCAGCTGCTGCTACTACTTCCACTACGTA 462
consensus_8073#4      CTAG-TACTATT-ACTTCTAC-TAT-----TGCAGCTGCTGCTACTACTTCCACTACT-- 128
consensus_8073#0      CTTGTAACTTGTAACTTTATCTAGCAGCGCCGCAACTGCACACTATACATTACGGATTTA 480
                         *   *                                               *    

consensus_8073#3      TG-GTGCGAAAGTGTG-CGAACATACCTACACACATCCACA---CATTTGTGGTGCGAAA 361
consensus_8073#5      TG-GTGCGAAAGTGTG-CGAACATACCTACAAAAACC----------------------- 108
consensus_8073#1      CG-GGGGGAGGATACAATGAACAGGGG-ACAGGAAACCCTG---CCCAGGGCGGGTTCCT 396
consensus_8073#2      AA-ATGCAAACCTGTAAGCAAGACGGGAAGGCAANAGTAGAAGCNAGATGAGACATCGAA 521
consensus_8073#4      AA-ATGCAAAC-TGTAAGCAA-ACGGAA--GCAAA--TAAA---CAAATGAAA--TCGAA 176
consensus_8073#0      CACACACACACATACACCTCA-ACATGAATACACACCTACACACGAACACACTCACAGTT 539
                                  *       * *                                     

consensus_8073#3      GTGTGCGAACATACCTACAAAAACCAAAACAAAAAAAAAACAAAAAACAAAAACAGTGGA 421
consensus_8073#5      -------------------AAAAC--AAAAAAAAAAAAAACAAAAAACAAAAACAGTGGA 147
consensus_8073#1      GTATAAAGCAATGAGGTGCCCACTCCGCTCACCTAGATGGGGAAGCACTGGGGCAATAGA 456
consensus_8073#2      CCCCAGTTACCCCGCGTTCCCAACTCCCCCATGTAAATCAAGCAGAGGGACAANGGTTGT 581
consensus_8073#4      CCCCAGTTCCCCCGC--TTCCCACTCCCCC-TGTAAATCAA-CAAAGGAA--AAGGTTGT 230
consensus_8073#0      ATGCAAGGCGAGTGATTTGGAAGTCTTCTCATAAAAAAGGCAAAAGCGAAACAAAAAAGC 599
                                                        * *      *              * 

consensus_8073#3      AAAGGGAAAAAG--AAAATTGCAATGTT-----GCTGGTAAGCGGCAGCAGTAA--AGGA 472
consensus_8073#5      AAAGGGAAAAAG--AAAATTGCAATGTT-----GCTGGTAAGCGGCAGCAGTAA--AGGA 198
consensus_8073#1      GGAGAATATATTCTAAAACTTTGATGTTTCTTTACTGTCAACGTATGGCAAGACGCATGG 516
consensus_8073#2      ACAAAGCGGAAANCGGGGTTGAATCGTN-----GGTA-TAAGGTGTAA-AGAAGTTATTA 634
consensus_8073#4      A-AAAGCGAAACG----GCTGAAT-GTT-----G-TA-TAAG-TGTAA-AGAA-TTATTA 274
consensus_8073#0      AAGAAAAAGGCTGTCAATCTCTGAACCCACTACGCAA--GAGCTGCGCTGCTCTGCTGTA 657
                                         *                    *                   

consensus_8073#3      ACAAACAAAAATCCCA--CGCCGATGCGCACCTAATTACTGAACATAT-ACATATAATGG 529
consensus_8073#5      ACAAACAAAAATCCCA--CGCCGATGCGCACCTAATTACTGAACATAT-ACATATAATGG 255
consensus_8073#1      ATGTGTAGTAGTAGTN--GGGTGTGTAGCAACTTNGTACTGATTCTAC-NAGCGTTCTAA 573
consensus_8073#2      GCAAACNTCCAAGCCG--GTCAGGTGAAATCGTTAAGCCAGTATCCC--ACGTTTGGGGA 690
consensus_8073#4      GCAA--CTCCAACC----GTCAG--TGAATCGTTAG--CTGTATCC---ACGTTTTGGA- 320
consensus_8073#0      GTAATTACTCGTACCATACGTTGTGTCTCTCGCCATGATTATTTATCCTCCGTCACGGAG 717
                                            *                                     

consensus_8073#3      A-TACAACTTACATATAAAACTGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTG 588
consensus_8073#5      A-TACAACTTACATATAAAACCGCGGGAATAGGTGTCCAGAACTGGATGGTAGTACAGTG 314
consensus_8073#1      AATCTGCCCCGCTCCCCCGTCCATTCAAGANACAGCAACGCATNGAANNGTAAAACAA-G 632
consensus_8073#2      NTTGCGATCTTAGTACTGCATAACANCAGTACACACCATGCAC---ACCGANNTATAGCG 747
consensus_8073#4      --TGCGATCT--ATACTGCATA--CACAGTACACAC-ATGCAC---ACAAATATACACAG 370
consensus_8073#0      CGACTATTGCAAGTATGGATGGAACGCAGAAACCGT-GCCCATGGGACTA-AACCCATCA 775
                                                 *             *    *         *   

consensus_8073#3      CAAACGTTGTAAGAATC-TATACATATATACATATATACATATAATATACATCCGTAGAC 647
consensus_8073#5      CAAACGTTGTAAGAATC-TATACAT----------------------------------- 338
consensus_8073#1      CAAACGAAATGANACCTGCGCGCACAACAGGGCGCAACAGCATTGCACCNAACACCTAAC 692
consensus_8073#2      CAGGACANCNAANGTTGACAAN-------------------------------------- 769
consensus_8073#4      ACACACTGACACGCCCTACAAACGAAGATTTCAGCTGACACTTGGCTATACTAAGCGGAT 430
consensus_8073#0      GAGGAGTCCATATTCATGTATGTGTGTGTGTTTGTACCAAATGTACTAACAGTTGGGTTG 835
                                                                                  

consensus_8073#3      GTATT------------------------------------------------------- 652
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      ACCACGCCTGACACACCACCTGGACCTCGCGGGGCCACCCTTTACGCACACGCCANANGT 752
consensus_8073#2      ------------------------------------------------------------
consensus_8073#4      ACTATGAATCAGTTGCTTACTCGTAAAG-------------------------------- 458
consensus_8073#0      ACAGCTGGTGTCACTCTGCCACATCCGTTACTAGGTATAGCCGCTACTTAAACTAGGTCG 895
                                                                                  

consensus_8073#3      ------------------------------------------------------------
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      ACGGANACACACAAGACACTGCCGN----------------------------------- 777
consensus_8073#2      ------------------------------------------------------------
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      ATGTCCCCATTCATGTTTATCATCGCAGGAATACCACGTACGGTTAAAAGCTCCGTAAAC 955
                                                                                  

consensus_8073#3      ------------------------------------------------------------
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      ------------------------------------------------------------
consensus_8073#2      ------------------------------------------------------------
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      CCATATTCACAACATCCGCACATCCACTCTGTATAACACTTGTACTCAAAAGAGCAGCTC 1015
                                                                                  

consensus_8073#3      ------------------------------------------------------------
consensus_8073#5      ------------------------------------------------------------
consensus_8073#1      ------------------------------------------------------------
consensus_8073#2      ------------------------------------------------------------
consensus_8073#4      ------------------------------------------------------------
consensus_8073#0      TCGACGAATTTCACGCAGCAGAAGGAACCCGAGCGAGGAACAAAAGTAACATACGCTCAA 1075
                                                                                  

consensus_8073#3      --
consensus_8073#5      --
consensus_8073#1      --
consensus_8073#2      --
consensus_8073#4      --
consensus_8073#0      AA 1077
                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)