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Anopheles gambiae
cluster # 8157 cluster # 8157       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8157#0 length = 1417 sequences # 6  
consensus_8157#1 length = 607 sequences # 2  
consensus_8157#2 length = 575 sequences # 1  

consensusID : consensus_8157#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1417
fasta sequence
                              [CACCATCACCATCCAGCACCGGAACTCGATCCCGAAGCGGAACGGCTACGAGCGGTACTCGGCGTTTGTCGACGTGGAAAACTATGCGCCCCCGCCTACCCAGTTCCTGCAGGAAACGACCACCACGACCACCACGATCACTACGAAATCGACGGAGAATCTGCTCGGCGGACCGTACAACCG-GTCCGACTCCAGTCTGTCCTGCGAGTGTCTCGAGACGGCCCCGCTCACAGGTGGTGCAGGAACGTCCGGCGCCGGGCTGGTGGAACACGTGCACGACAAAGCGGGCTACTATTCGACTCTGGCTG-GTGGTGGTGGTGGTGGTGCTGGTGCGTCCGGTTCGGGCAAAAAATCCAATCCCAACCTTACAGAGATTGCCCGTCTTTAAGCAGGGACCGGCACTAATGGGGACGTTCCATTTTGGGCGGCGTGTGGAAGGATGTTTTTGAAACATTAGTCACACATGCAGCATTTTAAATTGCAATCGGTCTGGTACTGGGGGGAAGGAGAGATAGTAGCGGCTCAAGCTTACCGGCAATCTCAGGCATAACCCGCGTAGTGTGTGGCGGTTTAAATTAGATGTTGAACATTTGGTAACATTTAATTAGCAAAGCACACTGAAAGACACGACAGACACGCGTCACATGGGGGGACACTGTGTAACAGCAGCAGCAGCTTTTGCAATGCCAATATTATCCTTAATTCGCCGTTGTTTCCACTTTACTATAGGTTATAGAGAAGCGTTGCGCGTATGGCGCTTCGATAAATTACGTAGAGAAAAAAAAAAACAAACACACACACAGATAGAGGGCGGCTTGGTACAATCGTTTTCTTCCAGACAGTTCAGAAAGTTCCAAAAGGTAGTGTGCTAATATAGCAGCAAGAGGAAAGAGTTCCTCCTCTTTAGGGCGTGTTTTTTTTATGATTTTGCAAAAGAAGCAAAAAAAGGATTAAGCAAAGATACTCGCTAAGCGCATATTTTTTTGTGCTATTCGGGGGAAAAGGTTTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGTGGTTGAATATGCTTTTGAGGGTTTAGAAGGTGGCCTCTGGTCGCGTGTTTTGCTCACTTACTCTTCCGGAAAGAGCGGCTCTATATGGGGCAGGTTGTAAAGGGGATGTAATATCATGTGTACTGACGCTGGGAGTGGAGGACGCCACTCAAGAGGAGGCTATTTGTGGACTGGTAAAAGTGTGTCTTTCTTCTAAAGCACACTGGTATGGGTCGCATAAAGGGAACAGTATAGAGAGATTAAAGGAAAGGTGCGGAGTGAGTAGTAACGCTCACCGGGACTGGGAAGGGAAAGTAGGATTTTAATAGATTAATACATAAAGAAGAAGAGAAAAACAAAACATTCGCAAAAGCT]

[+] EMBL CNS09OVS             [CACCATCACCATCCAGCACCGGAACTCGATCCCGAAGCGGAACGGCTACGAGCGGTACTCGGCGTTTGTCGACGTGGAAAACTATGCGCCCCCGCCTACCCAGTTCCTGCAGGAAACGACCACCACGACCACCACGATCACTACGAAATCGACGGAGAATCTGCTCGGCGGACCGTACAACCG GTCCGACTCCAGTCTGTCCTGCGAGTGTCTCGAGACGGCCCCGCTCACAGGTGGTGCAGGAACGTCCGGCGCCGGGCTGGTGGAACACGTGCACGACAAAGCGGGCTACTATTCGACTCTGGCTG GTGGTGGTGGTGGTGGTGCTGGTGCGTCCGGTTCGGGCAAAAAATCCAATCCCAACCTTACAGAGATTGCCCGTCTTTAAGCAGGGACCGGCACTAATGGGGACGTTCCATTTTGGGCGGCGTGTGGAAGGATGTTTTTGAAACATTAGTCACACATGCAGCATTTTAAATTGCAATCGGTCTGGTACTGGGGGGAAGGAGAGATAGTAGCGGCTCAAGCTTACCGGCAATCTCAGGCATAACCCGCGTAGTGTGTGGCGGTTTAAATTAGATGTTGAACATTTGGTAACATTTAATTAGCAAAGCACACTGAAAGACACGACAGACACGCGTCACATGGGGGGACACTGTGTAACAGCAGCAGCAGCTTTTGCAATGCCAATATTATCCTTAATTCGCCGTTGTTTCCACTTTACTATAGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09HQ7             [                                                                                                                                                                               TACAACCGCGTCCGACTCCAGTCTGTCCTGCGAGTGTCTCGAGACGGCCCCGCTCACAGGTGGTGCAGGAACGTCCGGCGCCGGGCTGGTGGAACACGTGCACGACAAAGCGGGCTACTATTCGACTCTGGCTG GTGGTGGTGGTGGTGGTGCTGGTGCGTCCGGTTCGGGCAAAAAATCCAATCCCAACCTTACAGAGATTGCCCGTCTTTAAGCAGGGACCGGCACTAATGGGGACGTTCCATTTTGGGCGGCGTGTGGAAGGATGTTTTTGAAACATTAGTCACACATGCAGCATTTTAAATTGCAATCGGTCTGGTACTGGGGGGAAGGAGAGATAGTAGCGGCTCAAGCTTACCGGCAATCTCAGGCATAACCCGCGTAGTGTGTGGCGGTTTAAATTAGATGTTGAACATTTGGTAACATTTAATTAGCAAAGCACACTGAAAGACACGACAGACACGCGTCACAT GGGGGACACTGTGTAACAGCAGCAGCAGCTTTTGCAATGCCAATATTATCCTTAATTCGCCGTTGTTTCCACTTTACTATAGGTTATAGAGAAGCGTTGCGCGTATGGCGCTTCGATAAATTACGTAGAGAAAAAAAAAAACAAACACACACACAGATAGAGGGCGGCTTGGTACAATCGTTTTCTTCCAGACAGTTCAGAAAGTTCCAAAAGGTAGTGTGCTAATATAGCAGCAAGAGGAAAGAGTTCCTCCTCTTTAGGGCGTGTTTTTTTTATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS095GA             [                                                                                                                                                                                                                                                                                                                aGCTGAGTGGTGGTGGTGGTGGTGCTGGTGCGTCCGGTTCGGGCAAAAAATCCAATCCCAACCTTACAGAGATTGCCCGTCTTTAAGCAGGGACCGGCACTAATGGGGACGTTCCATTTTAGGCGGCGTGTGGAAGGATTTTTTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS09OVT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATGCCAATATTATCCTTAATTCCCCGTTGTTTCCACTTTACTATAGGTTATAGAGAAGCGTTGCGCGTATGGCGCTTCGATAAATTACGTAGAGAAAAAAAAAAACAAACACACACACAGATAGAGGGCGGCTTGGTACAATCGTTTTCTTCCAGACAGTTCAGAAAGTTCCAAAAGGTAGTGTGCTAATATAGCAGCAAGAGGAAAGAGTTCCTCCTCTTTAGGGCGTG TTTTTTTATGATTTTGCAAAAGAAGCAAAAAAAGGATTAAGCAAAGATACTCGCTAAGCGCATATTTTTTTGTGCTATTCGGGGGAAAAGGTTTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGTGGTTGAATATGCTTTTGAGGGTTTAGAAGGTGGCCTCTGGTCGCGTGTTTTGCTCACTTACTCTTCCGGAAAGAGCGGCTCTATATGGGGCAGGTTGTAAAGGGGATGTAATATCATGTGTACTGACGCTGGGAGTGGAGGACGCCACTCAAGAGGAGGCTATTTGTGGACTGGTAAAAGTGTGTCTTTCTTCTAAAGCACACTGGTATGGGTCGCATAAAGGGAACAGTATAGAGAGATTAAAGGAAAGGTGCGGAGTGAGTAGTAACGCTCACCGGGACTGGGAAGGGAAAGTAGGATTTTAATAGATTAATACATAAAGAAGAAGAGAAAAACAAAACATTCGCAAAAGCT]
[-] EMBL CNS09HQ8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAGAGGGCGGCTTGGTACAATCGTTTTCTTCCAGACAGTTCAGAAAGTTCCAAAAGGTAGTGTGCTAATATAGCAGCAAGAGGAAAGAGTTCCCCCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS095GB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTCGGGGGAAAAGGTTTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGTAGAAGAATATGCTTTTGAGGGTTTAGAAGGTGGCCTCTGGTCGCGTGTTTTGCTCACTTACTCTTCCGGAAAGAGCGGCTCTATATGGGGCAGGTTGTAAAGGGGATGTAATATCATGTGTACTGACGCTGGGAGTGGAGGACGCCACTCAAGAGGAAACTATTTGTGGACTGGTAAAA                                                                                                                                                                               ]


>consensus_8157#0 CACCATCACCATCCAGCACCGGAACTCGATCCCGAAGCGGAACGGCTACGAGCGGTACTC GGCGTTTGTCGACGTGGAAAACTATGCGCCCCCGCCTACCCAGTTCCTGCAGGAAACGAC CACCACGACCACCACGATCACTACGAAATCGACGGAGAATCTGCTCGGCGGACCGTACAA CCGGTCCGACTCCAGTCTGTCCTGCGAGTGTCTCGAGACGGCCCCGCTCACAGGTGGTGC AGGAACGTCCGGCGCCGGGCTGGTGGAACACGTGCACGACAAAGCGGGCTACTATTCGAC TCTGGCTGGTGGTGGTGGTGGTGGTGCTGGTGCGTCCGGTTCGGGCAAAAAATCCAATCC CAACCTTACAGAGATTGCCCGTCTTTAAGCAGGGACCGGCACTAATGGGGACGTTCCATT TTGGGCGGCGTGTGGAAGGATGTTTTTGAAACATTAGTCACACATGCAGCATTTTAAATT GCAATCGGTCTGGTACTGGGGGGAAGGAGAGATAGTAGCGGCTCAAGCTTACCGGCAATC TCAGGCATAACCCGCGTAGTGTGTGGCGGTTTAAATTAGATGTTGAACATTTGGTAACAT TTAATTAGCAAAGCACACTGAAAGACACGACAGACACGCGTCACATGGGGGGACACTGTG TAACAGCAGCAGCAGCTTTTGCAATGCCAATATTATCCTTAATTCGCCGTTGTTTCCACT TTACTATAGGTTATAGAGAAGCGTTGCGCGTATGGCGCTTCGATAAATTACGTAGAGAAA AAAAAAAACAAACACACACACAGATAGAGGGCGGCTTGGTACAATCGTTTTCTTCCAGAC AGTTCAGAAAGTTCCAAAAGGTAGTGTGCTAATATAGCAGCAAGAGGAAAGAGTTCCTCC TCTTTAGGGCGTGTTTTTTTTATGATTTTGCAAAAGAAGCAAAAAAAGGATTAAGCAAAG ATACTCGCTAAGCGCATATTTTTTTGTGCTATTCGGGGGAAAAGGTTTGATCCAACTCCA CTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGTGGTTGAATATGCTTTTG AGGGTTTAGAAGGTGGCCTCTGGTCGCGTGTTTTGCTCACTTACTCTTCCGGAAAGAGCG GCTCTATATGGGGCAGGTTGTAAAGGGGATGTAATATCATGTGTACTGACGCTGGGAGTG GAGGACGCCACTCAAGAGGAGGCTATTTGTGGACTGGTAAAAGTGTGTCTTTCTTCTAAA GCACACTGGTATGGGTCGCATAAAGGGAACAGTATAGAGAGATTAAAGGAAAGGTGCGGA GTGAGTAGTAACGCTCACCGGGACTGGGAAGGGAAAGTAGGATTTTAATAGATTAATACA TAAAGAAGAAGAGAAAAACAAAACATTCGCAAAAGCT



consensusID : consensus_8157#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 607
fasta sequence
                              [CCGGCATATGATGCGTGGCTCCTCCCTAGACAGTAGCTCCCTGGGCGGTGGCTGCAAA------CAGCAGCAGCAGCAGCAGCAACAGTCCTCGCCAACGAAAAGTCTTCACAATTACGACACCAAAGCGGGCAAATCGGGGACCGGGTCGCGTCGCAGCGGCCATCTGCACGGCCACTCGTGCAACCCGTGCATGGGCCACTTTCTGCGCAGCAGCAGCAGCGGTGATAAGGGGCGCGGCGGTGGCGCCGACAAGGATAACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCCACAGTGTGTTCCGTCGCGGCGCAAGTCGAAGCACCACAAGGACCACCACCACAAGCACAAACACCGCGACCGGGAGGGCAAGGAGTCGGGCGGGAAGGATCGTATACCGCGGCCAAAGTCACAGCCACACATTTCAC--------CA-CAGCAGCAGCAGCAGCCGCAGCAGCAGCAACATCAGTCCCACACACAGTCGAACTATCTGTATCGACACAAAGATAAGCACGTAAGTTTCGATTGGACTAGTTGCGGCGTAGGCGGAGGACCTTGATTCTTCAGGAAATTCTTCCGGATTTTGAGACGGCTTTTGCAC]

[+] EMBL BM603242             [CCGGCATATGATGCGTGGCTCCTCCCTAGACAGTAGCTCCCTGGGCGGTGGCTGCAAA      CAGCAGCAGCAGCAGCAGCAACAGTCCTCGCCAACGAAAAGTCTTCACAATTACGACACCAAAGCGGGCAAATCGGGGACCGGGTCGCGTCGCAGCGGCCATCTGCACGGCCACTCGTGCAACCCGTGCATGGGCCACTTTCTGCGCAGCAGCAGCAGCGGTGATAAGGGGCGCGGCGGTGGCGCCGACAAGGATAACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCCACAGTGTGTTCCGTCGCGGCGCAAGTCGAAGCACCACAAGGACCACCACCACAAGCACAAACACCGCGACCGGGAGGGCAAGGAGTCGGGCGGGAAGGATCGTATACCGCGGCCAAAGTCACAGCCACACATTTCAC        CA CAGCAGCAGCAGCAGCCGCAGCAGCAGCAACATCAGTCCCACACACAGTCGAACTATCTGTATCGACACAAAGATAAGCACGTAAGTTTCGATTGGACTAGTTGCGGCGTAGGCGGAGGACCTTGATTCTTCAGGAAATTCTTCCGGATTTTGAGACGGCTTTTGCAC]
[+] EMBL BM642277             [                           ccgCAGTAGCTCCCTGGGCGGTGGCTGCAAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGTCCTCGCCAACGAAAAGTCTTCACAATTACGACACTAAAGCGGGCAAATCGGGGTCCGGGTCGCGTCGCAGCGGCCATCTGCACGGCCACTCGTGCAACCCTTGCATGGGCCACTTTCTGCGCAGTAGCAGCAGTGGCGATAAGGGGCGCGGCGGTGGCGCCGACAAGGATAACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCCACAGTGTGTTCCGTCGCGGCGCAAGTCGAAGCACCACAAGGACCACCACCACAAGCACAAACACCGCGACCGGGAGGGCAAGGAGTCGGGCGGGAAGGATCGTATACCGCGGCCAAAGTCACAGCCACACATTTCACCGCAGCAGCAGCAGCAGCAGCAGCAGCCGCAGCAGCAGCAACATCAGTCCCACACACAGTCGAACTATCTGTA                                                                                                          ]


>consensus_8157#1 CCGGCATATGATGCGTGGCTCCTCCCTAGACAGTAGCTCCCTGGGCGGTGGCTGCAAACA GCAGCAGCAGCAGCAGCAACAGTCCTCGCCAACGAAAAGTCTTCACAATTACGACACCAA AGCGGGCAAATCGGGGACCGGGTCGCGTCGCAGCGGCCATCTGCACGGCCACTCGTGCAA CCCGTGCATGGGCCACTTTCTGCGCAGCAGCAGCAGCGGTGATAAGGGGCGCGGCGGTGG CGCCGACAAGGATAACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCC ACAGTGTGTTCCGTCGCGGCGCAAGTCGAAGCACCACAAGGACCACCACCACAAGCACAA ACACCGCGACCGGGAGGGCAAGGAGTCGGGCGGGAAGGATCGTATACCGCGGCCAAAGTC ACAGCCACACATTTCACCACAGCAGCAGCAGCAGCCGCAGCAGCAGCAACATCAGTCCCA CACACAGTCGAACTATCTGTATCGACACAAAGATAAGCACGTAAGTTTCGATTGGACTAG TTGCGGCGTAGGCGGAGGACCTTGATTCTTCAGGAAATTCTTCCGGATTTTGAGACGGCT TTTGCAC



consensusID : consensus_8157#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence
                              [ACAAGGATAACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCCACAGTGTGTTCCGTCGCGGCGCAAGTCGAAGCACCACAAGGACCACCACCAGCGCTTAGCAGCAAGAGGAAAGAGTTCCTCCTCTTTAGGGGTGTTTTTTTATGATTTGCAAAAGAAGCAAAAAAAAAGATTAAGCAAAGATACTCGCAAAGGGCATATTTTTGTGCTATTCGGGGGGAAAAGGTTTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGTAGTTGAATATGCTTTGGAGGGTTTAGGAGGAGGCCTCATGTCGCGTGTTTTGCTCACTTACTCTTACTTCGGAAAGGACGGCTCTATATGGGGCAGGTTGTAAGGGGATGTAATATCATGTGTAGTTGACGCTGGGAGTGGACGCCGCTCAAGAGGAGGCTATTTGTGGACTGGTAAAAGTGTGTCTTTCTTCTAAAGCACACAGGTATGGGTCGCATAAGGGGAACAGCATAGAGAGATTAAAAGAAAGGTGAGGAGTGAGTTGTAACGCTCACCGG]

[+] EMBL BX615884             [ACAAGGATAACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCCACAGTGTGTTCCGTCGCGGCGCAAGTCGAAGCACCACAAGGACCACCACCAGCGCTTAGCAGCAAGAGGAAAGAGTTCCTCCTCTTTAGGGGTGTTTTTTTATGATTTGCAAAAGAAGCAAAAAAAAAGATTAAGCAAAGATACTCGCAAAGGGCATATTTTTGTGCTATTCGGGGGGAAAAGGTTTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGTAGTTGAATATGCTTTGGAGGGTTTAGGAGGAGGCCTCATGTCGCGTGTTTTGCTCACTTACTCTTACTTCGGAAAGGACGGCTCTATATGGGGCAGGTTGTAAGGGGATGTAATATCATGTGTAGTTGACGCTGGGAGTGGACGCCGCTCAAGAGGAGGCTATTTGTGGACTGGTAAAAGTGTGTCTTTCTTCTAAAGCACACAGGTATGGGTCGCATAAGGGGAACAGCATAGAGAGATTAAAAGAAAGGTGAGGAGTGAGTTGTAACGCTCACCGG]


>consensus_8157#2 ACAAGGATAACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCCACAGT GTGTTCCGTCGCGGCGCAAGTCGAAGCACCACAAGGACCACCACCAGCGCTTAGCAGCAA GAGGAAAGAGTTCCTCCTCTTTAGGGGTGTTTTTTTATGATTTGCAAAAGAAGCAAAAAA AAAGATTAAGCAAAGATACTCGCAAAGGGCATATTTTTGTGCTATTCGGGGGGAAAAGGT TTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGTAGT TGAATATGCTTTGGAGGGTTTAGGAGGAGGCCTCATGTCGCGTGTTTTGCTCACTTACTC TTACTTCGGAAAGGACGGCTCTATATGGGGCAGGTTGTAAGGGGATGTAATATCATGTGT AGTTGACGCTGGGAGTGGACGCCGCTCAAGAGGAGGCTATTTGTGGACTGGTAAAAGTGT GTCTTTCTTCTAAAGCACACAGGTATGGGTCGCATAAGGGGAACAGCATAGAGAGATTAA AAGAAAGGTGAGGAGTGAGTTGTAACGCTCACCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8157#0      CACCATCACCATCCAGCACCGGAACTCGATCCCGAAGCGGAACGGCTACGAGCGGTACTC 60
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      GGCGTTTGTCGACGTGGAAAACTATGCGCCCCCGCCTACCCAGTTCCTGCAGGAAACGAC 120
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      CACCACGACCACCACGATCACTACGAAATCGACGGAGAATCTGCTCGGCGGACCGTACAA 180
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      CCGGTCCGACTCCAGTCTGTCCTGCGAGTGTCTCGAGACGGCCCCGCTCACAGGTGGTGC 240
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      AGGAACGTCCGGCGCCGGGCTGGTGGAACACGTGCACGACAAAGCGGGCTACTATTCGAC 300
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      TCTGGCTGGTGGTGGTGGTGGTGGTGCTGGTGCGTCCGGTTCGGGCAAAAAATCCAATCC 360
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      CAACCTTACAGAGATTGCCCGTCTTTAAGCAGGGACCGGCACTAATGGGGACGTTCCATT 420
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      TTGGGCGGCGTGTGGAAGGATGTTTTTGAAACATTAGTCACACATGCAGCATTTTAAATT 480
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      GCAATCGGTCTGGTACTGGGGGGAAGGAGAGATAGTAGCGGCTCAAGCTTACCGGCAATC 540
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      TCAGGCATAACCCGCGTAGTGTGTGGCGGTTTAAATTAGATGTTGAACATTTGGTAACAT 600
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      TTAATTAGCAAAGCACACTGAAAGACACGACAGACACGCGTCACATGGGGGGACACTGTG 660
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      TAACAGCAGCAGCAGCTTTTGCAATGCCAATATTATCCTTAATTCGCCGTTGTTTCCACT 720
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      ------------------------------------------------------------
                                                                                  

consensus_8157#0      TTACTATAGGTTATAGAGAAGCGTTGCGCGTATGGCGCTTCGATAAATTACGTAGAGAAA 780
consensus_8157#2      ----------------------------------------------------ACAAGGAT 8
consensus_8157#1      --------------------------------------------CCGGCATATGATGCGT 16
                                                                              *   

consensus_8157#0      AAAAAAAACAAACACACACACAGATAGAGGGCGGCTTGGTACAATC----GTTTTCTTCC 836
consensus_8157#2      AACACCAGCCTGGATGCGTACGATCTGGCCAGCCCGTGCTGCGATCCACAGTGTGTTCCG 68
consensus_8157#1      GGCTCCTCCCTAGACAGTAGCTCCCTGGGCGGTGGCTGCAAACAGCAGCAGCAGCAGCAG 76
                              *    *      *     *         **     * *    *         

consensus_8157#0      AGACAG----TTCAGA---AAGTTCCAAA-AGGTAGTGTGCTAATA--TAGCAGCAAGAG 886
consensus_8157#2      TCGCGG----CGCAAGTCGAAGCACCACA-AGGACCACCACCAGCGCTTAGCAGCAAGAG 123
consensus_8157#1      CAACAGTCCTCGCCAACGAAAAGTCTTCACAATTACGACACCAAAGC-GGGCAAATCGGG 135
                         * *      *      **   *   * *         * *       ***    * *

consensus_8157#0      GAAAGAGTTCCTCCTCTTTAGGGCGTGTTTTTTTTATGATTTT-GCAAAAGAAGCAAAAA 945
consensus_8157#2      GAAAGAGTTCCTCCTCTTTAGGG-GTGTTTTTTT-ATGATTT--GCAAAAGAAGCAAAAA 179
consensus_8157#1      GACCGGGTCGCGTCGC---AGCGGCCATCTGCACGGCCACTCGTGCAACCCGTGCATGGG 192
                      **  * **  *  * *   ** *    * *        * *   ****     ***    

consensus_8157#0      AAG-GATTAAGCAAAGATACTCGCTAAGCGCATATTTTTTTGTGCTATTCGGGGG-AAAA 1003
consensus_8157#2      AAAAGATTAAGCAAAGATACTCGCAAAGGGCATATTTT--TGTGCTATTCGGGGGGAAAA 237
consensus_8157#1      CCA-CTTTCTGCGCAG-CAGCAGCAGCGGTGATAAGGGG-CGCGGCGGTGGCGCCGACAA 249
                            **  **  **  *   **   *   ***       * *    * * *   * **

consensus_8157#0      GGTTTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGT 1063
consensus_8157#2      GGTTTGATCCAACTCCACTAGAGCCAAACAATAGCGAGAGCGGGTGGCCATTAGAAAGGT 297
consensus_8157#1      GGATAACACCAGCCTGGATGCGTACGATC--TGGCCAGCCCGTGCTGCGATCCACAGTGT 307
                      ** *    *** *     *     * * *  * ** **  ** *  ** **    *  **

consensus_8157#0      GGTTGAATATGCTTTTGAGGGTTTAGAAGGTGGCCTCTGGTCGCGTGTTTTGCTCACTTA 1123
consensus_8157#2      AGTTGAATATGCTTTGGAGGGTTTAGGAGGAGGCCTCATGTCGCGTGTTTTGCTCACTTA 357
consensus_8157#1      GTTC-----CGTCGCGGCGCAAGTCGAAGCACCACAAGGACCAC-CACCACAAGCACAAA 361
                        *       *     * *    * * **     *      * *          ***  *

consensus_8157#0      CTCTT---CCGGAAAGA-GCGGCTCTATATGGGGCAGGTTGTAAAGGGGATGTAATATCA 1179
consensus_8157#2      CTCTTACTTCGGAAAGG-ACGGCTCTATATGGGGCAGGTTGTAA-GGGGATGTAATATCA 415
consensus_8157#1      CACCGCGACCGGGAGGGCAAGGAGTCGGGCGGGAAGGATCGTATACCGCGGCCAAAGTCA 421
                      * *      *** * *    **        ***   * * ***    *     **  ***

consensus_8157#0      TG----TGTA-CTGACGCTGGGAGTGGAGGACGCCACTCAAGAGGAGGCTATTTGTGGAC 1234
consensus_8157#2      TG----TGTAGTTGACGCTGGGAGTGGA---CGCCGCTCAAGAGGAGGCTATTTGTGGAC 468
consensus_8157#1      CAGCCACACATTTCACCACAGCAGCAGC---AGCAGCCGCAGCAGCAGCAACATCAGTCC 478
                               *  * **    * **  *     **  *   **  *  ** *  *  *  *

consensus_8157#0      TGGTAAAAGTGTGTCTTTCTTCTAAAGCACACTGGTATGGGTCGCATAAAGGGAACAGTA 1294
consensus_8157#2      TGGTAAAAGTGTGTCTTTCTTCTAAAGCACACAGGTATGGGTCGCATAAGGGGAACAGCA 528
consensus_8157#1      CACACACAGTCGAACTATCTGTATCGACACAAAGATA-AGCACGTAAGTTTCGATTGGAC 537
                           * ***    ** ***       ****  * **  *  ** *      **   *  

consensus_8157#0      TAG--AGAGATTAAAGGAAAGGTGCGGAGTGAGTAGTAACGCTCACCGGGACTGGGAAGG 1352
consensus_8157#2      TAG--AGAGATTAAAAGAAAGGTGAGGAGTGAGTTGTAACGCTCACCGG----------- 575
consensus_8157#1      TAGTTGCGGCGTAGGCGGAGGACCTTGATTCTTCAGGAAATTCTTCCGGATTTTGAGACG 597
                      ***     *  **   * * *     ** *     * **      ****           

consensus_8157#0      GAAAGTAGGATTTTAATAGATTAATACATAAAGAAGAAGAGAAAAACAAAACATTCGCAA 1412
consensus_8157#2      ------------------------------------------------------------
consensus_8157#1      GCTTTTGCAC-------------------------------------------------- 607
                                                                                  

consensus_8157#0      AAGCT 1417
consensus_8157#2      -----
consensus_8157#1      -----
                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)