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Anopheles gambiae
cluster # 8267 cluster # 8267       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8267#0 length = 2327 sequences # 7  
consensus_8267#1 length = 678 sequences # 1  
consensus_8267#2 length = 665 sequences # 1  

consensusID : consensus_8267#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2327
fasta sequence
                              [CCGGGCTCCTCAGATAATGACGGGCGCAGTTGCAAGTCCACCATTGAAGCAATCGCACCTTCAAGGTCAACAACCAATTGTCACTGGAGCCAGCAGTACACGTGTGGCGTTGCCTACTATGAGTCCACAGGGACAGTCAGCTCATCCGCAACTGCAGCAAGCAACTATACAACGGCACATAACTATTCCAGGCACGATCTACGATCCTGCAAACTTGGGACCGGATGGCGGATTCCGTGGTGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAGGTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGAACTTCG-CCGA-CCTGCTAGCGGACCTCG-CCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCCTGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATA-CATGGGAAGTGCA-CGGATACCGCACCCCT-ACCCAGAGACACTGAACGCGCGCTACTACGAACCAA-CCATTGGTGGCCCGAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAA-CCACCGCCAG-CTCA-CCGT-CCTCACAAT-CTA-TCCA-CGTCGG--CTTAC-AGT--GGGGCACC-GTT--CTCA-GTCA-CGCCAAGTCCAACACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGTGGCAGCCGCCGCTGCGGCTCTAGTGCAATCCGCTTCCGGCCAACGTTTGGTTGGAGAACGCGTAACGTCTGTTCCACCGGGTAGCGGATATTACTACCGCAGCGAGGTCGAACATGAGTTGTCCGATCAGCTACATCCTGGTGCGCTTGGGCATGGATCGTCATCGGTTGCTGCATCCGCTCCACTCCCAGCGCACACCGGAGGAATGATACCGTCCATGGGTACACCACAAACCGTTGCCATAGGAAGTCGTAACATACAAGTGGCAACGCCTCCGGTCACCCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCACCAGTGGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCAGCGATACCCGGTGATGTGGCAAGGACTGCTGGCACTCAAAAATGATCACGCAGCAGTACAGATGCACTTCGTGTATGGCAATCCGAACGTAGCANGTAGCTCGTTGCCNAGCAACAGCGACNGGTCGACGCCTCCGTTGCGCATTGCTCAGAGAATGCGGCTGGAACCGGCGCAGATAGATGGAGTAGCTAGTAAGATGCAGATGGTCAACGAACACTGTATGCTGTTAGCATTGCCGTGTGGCCGTGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATCACCTACCTGCAGCAGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGAAGTGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCTGGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGTGATTGCAACTGTGTAAAAACAAGCTGAGC---ATGATGTTACATAGAAAAAAAAAACTACAAAACTAC-AAAAAACACAAACACACAAGCAAATAGTATAATCCTAAAACACTGAAAATGATAGGGCATGTAAGACGAAAAGTTGAATTGTTGTCACATAGCAAGATAACCAAATGTAAAAAAGAAACAAAACGAAAAAAAAACACAATAGGTTTGTGAGAACAACATGAAATGAAATATTTACAAAACATCACATGTACCCCCATCTCCCGTTGGTACAAAGAA-ACATTTAAACTGGTTTTAATGAAGGATTTGTAGGTCGTGTTGAAAGGAAAAATTGACGTAGATTAAACAAACTGCAAAAAAAAAAAAGAAAACAGTCCAAAGGATAAACCCCTCGGTGCGAAATGTGTGATGATTTATCCATAATATCTCTTAAGTATTACTTCCGATAGTAACCACCTCCCACCATACGGCCTAGTGCGCCAAATTTGTGAAAACTATCGTTGTAAATGCAACCACCCACACGACACCACTATGGAAAAGTAAACAAAAATACAATGTTCAGCAAAGCGAATCTTTTCTACGCAAAGTAACAAATCAACGCAACCACCCTCTCTCCGCACAACGCGCATTGTTCACGTTCAGCTTTGGGTGCATTGCCTCTGTTCAAAAGAGTAATGCATGGGGGAGGGGCTATGCATTTTGCAAAATTATATCATC]

[+] EMBL BM631901             [CCGGGCTCCTCAGATAATGACGGGCGCAGTTGCAAGTCCACCATTGAAGCAATCGCACCTTCAAGGTCAACAACCAATTGTCACTGGAGCCAGCAGTACACGTGTGGCGTTGCCTACTATGAGTCCACAGGGACAGTCAGCTCATCCGCAACTGCAGCAAGCAACTATACAACGGCACATAACTATTCCAGGCACGATCTACGATCCTGCAAACTTGGGACCGGATGGCGGATTCCGTGGTGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCA   AGGTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGAACTTCG CCGA CCTGCTAGCGGACCTCG CCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCCTGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATA CATGGGAAGTGCA CGGATACCGCACCCCT ACCCAGAGACACTGAACGCGCGCTACTACGAACCAA CCATTGGTGGCCCGAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAA CCACCGCCAG CTCA CCGT CCTCACAAT CTA TCCA CGTCGG  CTTAC AGT  GGGGCACC GTT  CTCA GTCA CGCCAAGTCCAACACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF541761             [                                                                                            GCAGTACACGTGTGGCGTTGCCTACTATGAGTCCACAGGGACAGTCAGCCCATCCGCAACTGCAGCAAGCAACTATACAACGGCACATAACTATTCCAGGCACGATCTACGATCCTGCAAACTTGGGACCGGATGGCGGATTCCGTGGTGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAGGTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGAACTTCGNCCGACCCTGCTAGCGGACCTCGNCCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCCTGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATACCATGGGAAGTGCACCGGATACCGCACCCCTNNCCCAGAGACACTGAACGCGCGCTACTACGAACCAACCCATTGGTGGCNCGAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAACCCACCGCCAGCCTCACCCGTNNCTTACAATNCTATTCCACCGTCGGGCCTTACAAGTTGGGGGCACCNGNTNNCTCANGTNANCGCCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX623470             [                                                                                                            GTTGCCTACTATGAGTCCACAGGGACAGTCAGCTCATCCGCAACTGCAGCAAGCAACTATACAACGGCACATAACTATTCCAGGCACGATCTACGATCCTGCAAACTTGGGACCGGATGGCGGATTCCGTGGTGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAGGTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGAACTTCG CCGA CCTGCTAGCGGACCTCG CCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCCTGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATA CATGGGAAGTGCA CGGATACCGCACCCCT ACCCAGAGACACTGAACGCGCGCTACTACGAACCAA CCATTGGTGGCCCGAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAA CCACCGCCAG CTCA CCGT CCTCACAAT CTA TCCA CGTCGG  CTTAC AGT  GGGGCACC GTT  CTCA GTCA CGCCAAGTCCAACACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGTGGCAGCCGCCGCTGCGGCTCTAGTGCAATCCGCTTCCGGCCAACGTTTGGTTGGAGAACGCGTAACGTCTGTTCCACCGGGTAGCGGATATTACTACCGCAGCGAGGTCGAACATGAGTTGTCCGATCAGCTACATCCTGGTGCGCTTGGGCATGGATCGTCATCGGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX627166             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAA CCACCGCCAG CTCA CCGT CCTCACAAT CTA TCCA CGTCGG  CTTAC AGT  GGGGCACC GTT  CTCA GTCA CGCCAAGTCCAACACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGTGGCAGCCGCCGCTGCGGCTCTAGTGCAATCCGCTTCCGGCCAACGTTTGGTTGGAGAACGCGTAACGTCTGTTCCACCGGGTAGCGGATATTACTACCGCAGCGAGGTCGAACATGAGTTGTCCGATCAGCTACATCCTGTTGCGCTTGGCCATGGATCGTCATCGGTTGCTGCATCCGCTCCACTCCCAGCGCACACCGGAGGAATGATACCGTCCATGGGTACACCACAAACCGTTGCCATAGGAAGTCGTAACATACAAGTGGCAACGCCTCCGGTCACCCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCACCAGTGGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCAGCGATACCCGGTGATGTGGCAAGGACTGCTGGCACTCAAAAATGATCACGCAGCAGTACAGATGCACTTCGTGTATGGCAATCCGAACGTAGCANGTAGCTCGTTGCCNAGCAACAGCGACNGGTCGACGCCTCCGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX615051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACCACAAACCGTTGCCATAGGAAGTCGTAACATACAAGTGGCAACGCCTCCGGTCACCCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCACCAGTGGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCAGCGATACCCGGTGATGTGGCAAGGACTGCTGGCACTCAAAAATGATCACGCAGCAGTACAGATGCACTTCGTGTATGGCAATCCGAACGTAGCAGGTAGCTCGTTGCTAAGCAACAGCGACGGGTCGACGCCTCCGTTGCGCATTGCTCAGAGAATGCGGCTGGAACCGGCGCAGATAGATGGAGTAGCTAGTAAGATGCAGATGGTCAACGAACACTGTATGCTGTTAGCATTGCCGTGTGGCCGTGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATCACCTACCTGCAGCAGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGAAGTGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCTGGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGTGATTGCAACTGTGTAAAAACAAGCTGAGC   ATGATGTTACATAGAAAAAAAAAACTACAAAACTAC AAAAAACACAAACACACAAGCAAATAGTATAATCCTAAAACACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM628503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccgCGAACACTGTATGCTGTTAGCATTGCCGTGTGGCCGTGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATCACCTACCTGCAGCAGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGAAGTGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCTGGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGTGATTGCAACTGTGTAAAAACAAGCTGAGCATGATGATGTTACATAG  AAAAAAAACTACCAAACTACAAAAAAACACAAACACACAAGCAAATAGTATAATCCTAAAACACTGAAAATGATAGGGCATGTAAGACGAAAAGTTGAATTGTTGTCACATAGCAAGATAACCAAATGTAAAAAAGAAACAAAACGAAAAAAAAACACAATAGGTTTGTGAGAACAACATGAAATGAAATATTTACAAAACATCACATGTACCCCCATCTCCCGTTGGTACAAAGAA ACATTTAAACTGGTTTTAATGAAGGATTTGTAGGTCGTGTTGAAAGGAAAAATTGACGTAGATTAAACAAACTGCAAAAAAAAAAAAGAAAACAGTCCAAAGGATAAACCCCTCGGTGCGAAATGTGTGATGATTTATCCATAATATCTCTT                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM625012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTACAAAACTAC AAAAAACACAAACACACAAGCAAATAGTATAATCCTAAAACACTGAAAATGATAGGGCATGTAAGACGAAAAGTTGAATTGTTGTCACATAGCAAGATAACCAAATGTAAAAAAGAAACAAAACGAAAAAAAAACACAATAGGTTTGTGAGAACAACATGAAATGAAATATTTACAAAACATCACATGTACCCCCATCTCCCGTTGGTACAAAGAATACATTTAAACTGGTTTTAATGAAGGATTTGTAGGTCGTGTTGAAAGGAAAAATTGACGTAGATTAAACAAACTGCAAAAAAAAAAAAGAAAACAGTCCAAAGGATAAACCCCTCGGTGCGAAATGTGTGATGATTTATCCATAATATCTCTTAAGTATTACTTCCGATAGTAACCACCTCCCACCATACGGCCTAGTGCGCCAAATTTGTGAAAACTATCGTTGTAAATGCAACCACCCACACGACACCACTATGGAAAAGTAAACAAAAATACAATGTTCAGCAAAGCGAATCTTTTCTACGCAAAGTAACAAATCAACGCAACCACCCTCTCTCCGCACAACGCGCATTGTTCACGTTCAGCTTTGGGTGCATTGCCTCTGTTCAAAAGAGTAATGCATGGGGGAGGGGCTATGCATTTTGCAAAATTATATCATC]


>consensus_8267#0 CCGGGCTCCTCAGATAATGACGGGCGCAGTTGCAAGTCCACCATTGAAGCAATCGCACCT TCAAGGTCAACAACCAATTGTCACTGGAGCCAGCAGTACACGTGTGGCGTTGCCTACTAT GAGTCCACAGGGACAGTCAGCTCATCCGCAACTGCAGCAAGCAACTATACAACGGCACAT AACTATTCCAGGCACGATCTACGATCCTGCAAACTTGGGACCGGATGGCGGATTCCGTGG TGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAG GTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGA ACTTCGCCGACCTGCTAGCGGACCTCGCCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCC TGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATACATGGGAAGTGCACGGAT ACCGCACCCCTACCCAGAGACACTGAACGCGCGCTACTACGAACCAACCATTGGTGGCCC GAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAACCACCGCCAGCTCACCGTCC TCACAATCTATCCACGTCGGCTTACAGTGGGGCACCGTTCTCAGTCACGCCAAGTCCAAC ACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAAGTGGCAGCCGCCGCTGCGGCTCTAGTGCAATC CGCTTCCGGCCAACGTTTGGTTGGAGAACGCGTAACGTCTGTTCCACCGGGTAGCGGATA TTACTACCGCAGCGAGGTCGAACATGAGTTGTCCGATCAGCTACATCCTGGTGCGCTTGG GCATGGATCGTCATCGGTTGCTGCATCCGCTCCACTCCCAGCGCACACCGGAGGAATGAT ACCGTCCATGGGTACACCACAAACCGTTGCCATAGGAAGTCGTAACATACAAGTGGCAAC GCCTCCGGTCACCCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCACCAGTGGTGTC GGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCAGCGATA CCCGGTGATGTGGCAAGGACTGCTGGCACTCAAAAATGATCACGCAGCAGTACAGATGCA CTTCGTGTATGGCAATCCGAACGTAGCANGTAGCTCGTTGCCNAGCAACAGCGACNGGTC GACGCCTCCGTTGCGCATTGCTCAGAGAATGCGGCTGGAACCGGCGCAGATAGATGGAGT AGCTAGTAAGATGCAGATGGTCAACGAACACTGTATGCTGTTAGCATTGCCGTGTGGCCG TGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATCACCTACCT GCAGCAGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGAAGTGCGCAGGCGGC ATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCTGGCTCGTATCGC ACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGTGATTGCAACTGT GTAAAAACAAGCTGAGCATGATGTTACATAGAAAAAAAAAACTACAAAACTACAAAAAAC ACAAACACACAAGCAAATAGTATAATCCTAAAACACTGAAAATGATAGGGCATGTAAGAC GAAAAGTTGAATTGTTGTCACATAGCAAGATAACCAAATGTAAAAAAGAAACAAAACGAA AAAAAAACACAATAGGTTTGTGAGAACAACATGAAATGAAATATTTACAAAACATCACAT GTACCCCCATCTCCCGTTGGTACAAAGAAACATTTAAACTGGTTTTAATGAAGGATTTGT AGGTCGTGTTGAAAGGAAAAATTGACGTAGATTAAACAAACTGCAAAAAAAAAAAAGAAA ACAGTCCAAAGGATAAACCCCTCGGTGCGAAATGTGTGATGATTTATCCATAATATCTCT TAAGTATTACTTCCGATAGTAACCACCTCCCACCATACGGCCTAGTGCGCCAAATTTGTG AAAACTATCGTTGTAAATGCAACCACCCACACGACACCACTATGGAAAAGTAAACAAAAA TACAATGTTCAGCAAAGCGAATCTTTTCTACGCAAAGTAACAAATCAACGCAACCACCCT CTCTCCGCACAACGCGCATTGTTCACGTTCAGCTTTGGGTGCATTGCCTCTGTTCAAAAG AGTAATGCATGGGGGAGGGGCTATGCATTTTGCAAAATTATATCATC



consensusID : consensus_8267#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence
                              [CCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCCACCCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCACCAGTGGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCAGCGATACCCGGTGATGTGGCAAGGACTGCTGGCACTCAAAAATGATCACGCAGCAGTACAGATGCACTTCGTGTATGGCAATCCGAACGTAGCAGGTAGCTCGTTGCCAAGCAACAGCGACGGGTCGACGCCTCCGTTGCGCATTGCTCAGAGAATGCGGCTGGAACCGGCGCAGATAGATGGAGTAGCTAGGAAGATGCAGATGGTCAACGAACACTGTATGCTGTTAGCATTGCCGTGTGGTCGTGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATCACCTACCTGCAGCAGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGAAGTGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCTGGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGTGATTGCAACTGTGTAAAGACAAGCTGAGCATGATGATGTTACATAGAAAAAAAAACTACAAAA]

[+] EMBL BX625497             [CCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCCACCCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCACCAGTGGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCAGCGATACCCGGTGATGTGGCAAGGACTGCTGGCACTCAAAAATGATCACGCAGCAGTACAGATGCACTTCGTGTATGGCAATCCGAACGTAGCAGGTAGCTCGTTGCCAAGCAACAGCGACGGGTCGACGCCTCCGTTGCGCATTGCTCAGAGAATGCGGCTGGAACCGGCGCAGATAGATGGAGTAGCTAGGAAGATGCAGATGGTCAACGAACACTGTATGCTGTTAGCATTGCCGTGTGGTCGTGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATCACCTACCTGCAGCAGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGAAGTGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCTGGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGTGATTGCAACTGTGTAAAGACAAGCTGAGCATGATGATGTTACATAGAAAAAAAAACTACAAAA]


>consensus_8267#1 CCCTATGGGTGGCGGAAGTGTCAGCGGCAGTAGTGCCACCCCTATGGGTGGCGGAAGTGT CAGCGGCAGTAGTGCACCAGTGGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGA TTCGCTTGATGCGCTGCTCCAGCGATACCCGGTGATGTGGCAAGGACTGCTGGCACTCAA AAATGATCACGCAGCAGTACAGATGCACTTCGTGTATGGCAATCCGAACGTAGCAGGTAG CTCGTTGCCAAGCAACAGCGACGGGTCGACGCCTCCGTTGCGCATTGCTCAGAGAATGCG GCTGGAACCGGCGCAGATAGATGGAGTAGCTAGGAAGATGCAGATGGTCAACGAACACTG TATGCTGTTAGCATTGCCGTGTGGTCGTGATCGGATGGACGTATTGCAGCAGCAGAACAA TCTGCAAACTGGCTTCATCACCTACCTGCAGCAGAAACAGGCAGCTGGTATCGTCAACAT AGCGGCACCAGGAAGTGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTT TGCCAACGAAAATCTGGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCA GTACCTGCTAATCGTGATTGCAACTGTGTAAAGACAAGCTGAGCATGATGATGTTACATA GAAAAAAAAACTACAAAA



consensusID : consensus_8267#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence
                              [CCGAGCAACTATACAACGGCACATAACTATTCCAGGCACGATCTACGATCCTGCAAACTTGCGTGGTGATTTGAGTGGCTTCATCAACCGAGGACAGAGTCCTCCGCCTGCTCACCAACAAACATCTCCAATAACACCGGTTCACGGACCGGATGGCGGATTCCGTGGTGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAGGTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGAACTTCGCCGACCTGCTAGCGGACCTCGCCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCCTGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATACATGGGAAGTGCACGGATACCGCACCCCTACCCAGAGACACTGAACGCGCGCTACTACGAACCAACCATTGGTGGCCCGAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAACCACCGCCAGCTCACCGTCCTCACAATCTATCCACGTCGGCTTACAGTGGGGCACCGTTCTCAGTCACGCCAAGTCCAACACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCAGCAACAGCAGCAGCAGC]

[+] EMBL BM600376             [CCGAGCAACTATACAACGGCACATAACTATTCCAGGCACGATCTACGATCCTGCAAACTTGCGTGGTGATTTGAGTGGCTTCATCAACCGAGGACAGAGTCCTCCGCCTGCTCACCAACAAACATCTCCAATAACACCGGTTCACGGACCGGATGGCGGATTCCGTGGTGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAGGTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGAACTTCGCCGACCTGCTAGCGGACCTCGCCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCCTGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATACATGGGAAGTGCACGGATACCGCACCCCTACCCAGAGACACTGAACGCGCGCTACTACGAACCAACCATTGGTGGCCCGAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAACCACCGCCAGCTCACCGTCCTCACAATCTATCCACGTCGGCTTACAGTGGGGCACCGTTCTCAGTCACGCCAAGTCCAACACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCAGCAACAGCAGCAGCAGC]


>consensus_8267#2 CCGAGCAACTATACAACGGCACATAACTATTCCAGGCACGATCTACGATCCTGCAAACTT GCGTGGTGATTTGAGTGGCTTCATCAACCGAGGACAGAGTCCTCCGCCTGCTCACCAACA AACATCTCCAATAACACCGGTTCACGGACCGGATGGCGGATTCCGTGGTGGTATGCCGAG GGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAGGTCACCCATGCG GGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGAACTTCGCCGACC TGCTAGCGGACCTCGCCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCCTGGCGATCGTGT GACGGATTCACCACAAGGCGCTCAGATATACATGGGAAGTGCACGGATACCGCACCCCTA CCCAGAGACACTGAACGCGCGCTACTACGAACCAACCATTGGTGGCCCGAACGGAGGAAG TGCAGGACCGAGAGCACTGAGCACGGAACCACCGCCAGCTCACCGTCCTCACAATCTATC CACGTCGGCTTACAGTGGGGCACCGTTCTCAGTCACGCCAAGTCCAACACCGCCACCATC AGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCAGCAACAGCAGCA GCAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8267#0      CCGGGCTCCTCAGATAATGACGGGCGCAGTTGCAAGTCCACCATTGAAGCAATCGCACCT 60
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TCAAGGTCAACAACCAATTGTCACTGGAGCCAGCAGTACACGTGTGGCGTTGCCTACTAT 120
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      GAGTCCACAGGGACAGTCAGCTCATCCGCAACTGCAGCAAGCAACTATACAACGGCACAT 180
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      AACTATTCCAGGCACGATCTACGATCCTGCAAACTTGGGACCGGATGGCGGATTCCGTGG 240
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TGGTATGCCGAGGGACTACGTGAAGTACGTGTACCGTAGCAACATTCCTATTCCAAGCAG 300
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      GTCACCCATGCGGGAAATGCCCGAGATGGAAGAAACGGTTGCTGCTAGTCCACCGTTGGA 360
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      ACTTCGCCGACCTGCTAGCGGACCTCGCCCAACCGCCGTTCCGCTTAGTCTGCAAAGTCC 420
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TGGCGATCGTGTGACGGATTCACCACAAGGCGCTCAGATATACATGGGAAGTGCACGGAT 480
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      ACCGCACCCCTACCCAGAGACACTGAACGCGCGCTACTACGAACCAACCATTGGTGGCCC 540
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      GAACGGAGGAAGTGCAGGACCGAGAGCACTGAGCACGGAACCACCGCCAGCTCACCGTCC 600
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TCACAATCTATCCACGTCGGCTTACAGTGGGGCACCGTTCTCAGTCACGCCAAGTCCAAC 660
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      ACCGCCACCATCAGCCTCTCCCGCAACCATGCTGCACATTCAGCGGGAAAGAGATCAGCA 720
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      GCAGCAGCAGCAGCAGCAGCAGCAGCAAGTGGCAGCCGCCGCTGCGGCTCTAGTGCAATC 780
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      CGCTTCCGGCCAACGTTTGGTTGGAGAACGCGTAACGTCTGTTCCACCGGGTAGCGGATA 840
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TTACTACCGCAGCGAGGTCGAACATGAGTTGTCCGATCAGCTACATCCTGGTGCGCTTGG 900
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      GCATGGATCGTCATCGGTTGCTGCATCCGCTCCACTCCCAGCGCACACCGGAGGAATGAT 960
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      ACCGTCCATGGGTACACCACAAACCGTTGCCATA-GGAAGTCGTAACATACAAGTGGCAA 1019
consensus_8267#1      ---------------------------CCCTATG-GGTGGCGGAAG--TGTCAGCGGCAG 30
consensus_8267#2      ---------------------CCGAGCAACTATACAACGGCACATAACTATTCCAGGCAC 39
                                                   * **      *        *      **** 

consensus_8267#0      CGCCTCCGGTCACCCCTA--TGGGTGGCGG---AAGTGTCAGCGGCAGTAGTGCACCAGT 1074
consensus_8267#1      TAGT----GCCACCCCTA--TGGGTGGCGG---AAGTGTCAGCGGCAGTAGTGCACCAGT 81
consensus_8267#2      GATCTACGATCCTGCAAACTTGCGTGGTGATTTGAGTGGCTTCATCAACCGAGGACAGAG 99
                                *   *  *  ** **** *     **** *  *  **   * * **    

consensus_8267#0      GGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCA 1134
consensus_8267#1      GGTGTCGGTTGTTCCAACGCCTCCGCCTGTGCAAAAGGATTCGCTTGATGCGCTGCTCCA 141
consensus_8267#2      TCCTCCGCCTGCTC--ACCAACAAACATCTCCAATAACAC-CGGTTCACGGACCGGATGG 156
                           **  ** **  **       * * * *** *  *  ** ** * *  * *     

consensus_8267#0      GCGATACC-CGGTGATGTGGCAAGG-ACTGCTGGCACTCAAAAATGATCACGCAGCAGTA 1192
consensus_8267#1      GCGATACC-CGGTGATGTGGCAAGG-ACTGCTGGCACTCAAAAATGATCACGCAGCAGTA 199
consensus_8267#2      CGGATTCCGTGGTGGTATGCCGAGGGACTACGTGAAGT---ACGTG-TACCGTAGCA--A 210
                        *** **  **** * ** * *** *** *  * * *   *  ** *  ** ****  *

consensus_8267#0      CAGATGCACTTCGTGTATGGCAATCCGAACGTAGCANGTAGCTCGTTGCCNAGCAACAGC 1252
consensus_8267#1      CAGATGCACTTCGTGTATGGCAATCCGAACGTAGCAGGTAGCTCGTTGCCAAGCAACAGC 259
consensus_8267#2      CATTCCTATTCCAAGCAGGTCACCC---ATGCGGGAAATGCCCGAGATGGAAGAAACGGT 267
                      **     * * *  * * * **  *   * *  * *  *  *         ** *** * 

consensus_8267#0      GACNGGTCGACGCCTCCGTTGCGCATTGCTCAGAGAATGCGGCTGGAACCGGCGCAGATA 1312
consensus_8267#1      GACGGGTCGACGCCTCCGTTGCGCATTGCTCAGAGAATGCGGCTGGAACCGGCGCAGATA 319
consensus_8267#2      TGCTGCTAGT--CCACCGTTG-GAACTTCGCCGACC-TGCTAGCGGACCTCGCCCA-ACC 322
                        * * * *   ** ****** * * * * * **   ***    *** *  ** ** *  

consensus_8267#0      GATGGAGTAGCTAGTAAGATGCAGATGGTCAACGAACACTGTATGCTGTTAGCATTGCCG 1372
consensus_8267#1      GATGGAGTAGCTAGGAAGATGCAGATGGTCAACGAACACTGTATGCTGTTAGCATTGCCG 379
consensus_8267#2      GCCGTTCCGCTTAGTC---TGCAAAGTCCTGGCGA---TCGTGTGACGGATTCACCACAA 376
                      *  *       ***     **** *       ***     ** **  *    **   *  

consensus_8267#0      TGTGGCCGTGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATC 1432
consensus_8267#1      TGTGGTCGTGATCGGATGGACGTATTGCAGCAGCAGAACAATCTGCAAACTGGCTTCATC 439
consensus_8267#2      GGCGCTCAGATATACATGG--GAAGTGCACGGATACCGCA--CCCCTACCCAGAGACACT 432
                       * *  *        ****  * * ****     *   **  *  * * *  *   **  

consensus_8267#0      ACCTACCTGCAGC-AGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGA---AG 1488
consensus_8267#1      ACCTACCTGCAGC-AGAAACAGGCAGCTGGTATCGTCAACATAGCGGCACCAGGA---AG 495
consensus_8267#2      GAACGCGCGCTACTACGAACCAACCATTGGTGGCCCGAACGGAGGAAGTGCAGGACCGAG 492
                           *  **  * *  ***   *   ****  *   ***  **      *****   **

consensus_8267#0      TGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCT 1548
consensus_8267#1      TGCGCAGGCGGCATACGTGGTGCATATATTCCCATCTTGCGAGTTTGCCAACGAAAATCT 555
consensus_8267#2      AGCACTGAGCACGGAACCACCGC-CAGCTCACCGTCCTCACAATCTATCCACGTCGGCTT 551
                       ** * *    *  *      **  *  *  ** ** *   * * *  * ***      *

consensus_8267#0      GGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGT 1608
consensus_8267#1      GGCTCGTATCGCACCGGACCTAATGCACCGTGTGGCAAACATCCAGTACCTGCTAATCGT 615
consensus_8267#2      A--CAGTGGGGCACCGTTCTCAGT-CACGCCAAGTCCAACACC--GCCACCATCAGCCTC 606
                           **   ******  *  * * ***     * * **** *  *   *    *  *  

consensus_8267#0      GATTGCAACTGTGTAAAAACAAGCTGAGCATGATG---TTACATAGAAAAAAAAAACTAC 1665
consensus_8267#1      GATTGCAACTGTGTAAAGACAAGCTGAGCATGATGATGTTACATAGAAAAAAAAA-CTAC 674
consensus_8267#2      TCCCGCAACCATGCTG---CACATTCAGCGGGAAAGAGATCAGCAGCAACAGCAG-CAGC 662
                          *****  **      **   * ***  **      *    ** ** *  *  *  *

consensus_8267#0      AAAACTACAAAAAACACAAACACACAAGCAAATAGTATAATCCTAAAACACTGAAAATGA 1725
consensus_8267#1      AAAA-------------------------------------------------------- 678
consensus_8267#2      AGC--------------------------------------------------------- 665
                      *                                                           

consensus_8267#0      TAGGGCATGTAAGACGAAAAGTTGAATTGTTGTCACATAGCAAGATAACCAAATGTAAAA 1785
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      AAGAAACAAAACGAAAAAAAAACACAATAGGTTTGTGAGAACAACATGAAATGAAATATT 1845
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TACAAAACATCACATGTACCCCCATCTCCCGTTGGTACAAAGAAACATTTAAACTGGTTT 1905
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TAATGAAGGATTTGTAGGTCGTGTTGAAAGGAAAAATTGACGTAGATTAAACAAACTGCA 1965
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      AAAAAAAAAAAGAAAACAGTCCAAAGGATAAACCCCTCGGTGCGAAATGTGTGATGATTT 2025
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      ATCCATAATATCTCTTAAGTATTACTTCCGATAGTAACCACCTCCCACCATACGGCCTAG 2085
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TGCGCCAAATTTGTGAAAACTATCGTTGTAAATGCAACCACCCACACGACACCACTATGG 2145
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      AAAAGTAAACAAAAATACAATGTTCAGCAAAGCGAATCTTTTCTACGCAAAGTAACAAAT 2205
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      CAACGCAACCACCCTCTCTCCGCACAACGCGCATTGTTCACGTTCAGCTTTGGGTGCATT 2265
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      GCCTCTGTTCAAAAGAGTAATGCATGGGGGAGGGGCTATGCATTTTGCAAAATTATATCA 2325
consensus_8267#1      ------------------------------------------------------------
consensus_8267#2      ------------------------------------------------------------
                                                                                  

consensus_8267#0      TC 2327
consensus_8267#1      --
consensus_8267#2      --
                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)