These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8402#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1482 fasta sequence [GGCAGAATCCCCCGCGGTTTAAAGACTAAAAGCGAAAAAGGCNTATCTTAAGACAAATTGTTCCCGGACAACACGCAGCAGCAGCATAGCAGAGCAGGGCAGCATGCAAGCAGAGAGAATCCCCAAGAAAGCGTAAGAACCAGCAAGCCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGATGTGGCCACCGCGTAAGTGGCACTGATCGTAGTGCCGGCGTGTTTCAGGTGCATTCGGTTTAGTATAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTTCTTTTCGATATACAAAAAACAAAACAGTCACAATTGGGCAGCTAATATTCCATTCTAATACCCAGCTCAGAGCGATATATCTTCCAACAAAGCATGGTGATCGTGATCATTTGTGTAGATNAAAACAGAGACCGTATNTTTCCAGAGCAATGTATACATTCCACAAAACATTTTTATCCACTACCAGACAGGCATAGTTCACAGGGACAGATTGTATGTTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACGCTGGGTTTTTGCTAACGCAAGAACGAACGAAAGGGACCATCGGGCNTGTATTTGGTATTTAGNGGCGATNNTNTANNAAAAAGTAGATTGACGGGGATTAACGATCCCCTTCTCTTACATTATTACATATNGTANTAAAAGGTTTTAGATGAAACTAGTAACTCGNAAGNAGCTGTAAGTANAGTAAAGTGTANCACATGTTATAGGTCATATACTGGTGGTNTGCNATGGCAACCACGNCCATGNTNCCTGTTAACGAAATAATTACGCAAANTCGGTCACTTACGTACNCAACNACTCAAACNTACCACCACGGGCAGTTTTGNGGCCCGCAAGAATANACCCCTTCAAATGAGGGCTNATATTGACCTCATGNACACGTGCCGCANGTAATANCAACNCTGGGACTGNGTNAAACCCGTGCGTGTCCCCAANAATATGNTTNGNACAATCCCATATTCGCCAGTGNGNANAACACAAAGCANCCNNNGACCCCCCAAGTGGGCCNCTAGAGTCNGTAAGCCCCTAAGGCGCACAAANGAAGGTGTTGATCGAGTNAACGAAAATGGAAGCGAATCACACNTNNNGGCGNGCAACANACTATATTTATTTTTNTTTANACTGAGAGAGAGNNGGANACATCAAGCNAACGACTCNCANNCCATGCCACGGGCGGCGGGGGACCGGGGCGAGGNGNNGNCCNNGCGGGAAGCGGGGGNGNNAGGANNNNGGNNCGGGGGANNGANCGAGAAANAANGGNGANNGGGNAGAGGAGGNGGGGGAGCGCGNAACAGCCCGANANANNGCGGCGANGNNANAGANGAGCANGNGCACGAAGANCCANACANACGGGNGGACCNGGTCNNNGNNGNAGGGGNGGGGGGAGGNGGGANCGNCANCGGGNANNCACGAGGGACANANGGAGGGAAN] [+] EMBL AL695070 [GGCAGAATCCCCCGCGGTTTAAAGACTAAAAGCGAAAAAGGCNTATCTTAAGACAAATTGTTCCCGGACAACACGCAGCAGCAGCATAGCAGAGCAGGGCAGCATGCAAGCAGAGAGAATCCCCAAGAAAGCGTAAGAACCAGCAAGCCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGATGTGGCCACCGCGTAAGTGGCACTGATCGTAGTGCCGGCGTGTTTCAGGTGCATTCGGTTTAGTATAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTTCTTTTCGATATACAAAAAACAAAACAGTCACAATTGGGCAGCTAATATTCCATTCTAATACCCAGCTCAGAGCGATATATCTTCCAACAAAGCATGGTGATCGTGATCATTTGTGTAGATNAAAACAGAGACCGTATNTTTCCAGAGCAATGTATACATTCCACAAAACATTTTTATCCACTACCAGACAGGCATAGTTCACAGGGACAGATTGTATGTTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACGCTGGGTTTTTGCTAACGCAAGAACGAACGAAAGGGACCATCGGGCNTGTATTTGGTATTTAGNGGCGATNNTNTANNAAAAAGTAGATTGACGGGGATTAACGATCCCCTTCTCTTACATTATTACATATNGTANTAAAAGGTTTTAGATGAAACTAGTAACTCGNAAGNAGCTGTAAGTANAGTAAAGTGTANCACATGTTATAGGTCATATACTGGTGGTNTGCNATGGCAACCACGNCCATGNTNCCTGTTAACGAAATAATTACGCAAANTCGGTCACTTACGTACNCAACNACTCAAACNTACCACCACGGGCAGTTTTGNGGCCCGCAAGAATANACCCCTTCAAATGAGGGCTNATATTGACCTCATGNACACGTGCCGCANGTAATANCAACNCTGGGACTGNGTNAAACCCGTGCGTGTCCCCAANAATATGNTTNGNACAATCCCATATTCGCCAGTGNGNANAACACAAAGCANCCNNNGACCCCCCAAGTGGGCCNCTAGAGTCNGTAAGCCCCTAAGGCGCACAAANGAAGGTGTTGATCGAGTNAACGAAAATGGAAGCGAATCACACNTNNNGGCGNGCAACANACTATATTTATTTTTNTTTANACTGAGAGAGAGNNGGANACATCAAGCNAACGACTCNCANNCCATGCCACGGGCGGCGGGGGACCGGGGCGAGGNGNNGNCCNNGCGGGAAGCGGGGGNGNNAGGANNNNGGNNCGGGGGANNGANCGAGAAANAANGGNGANNGGGNAGAGGAGGNGGGGGAGCGCGNAACAGCCCGANANANNGCGGCGANGNNANAGANGAGCANGNGCACGAAGANCCANACANACGGGNGGACCNGGTCNNNGNNGNAGGGGNGGGGGGAGGNGGGANCGNCANCGGGNANNCACGAGGGACANANGGAGGGAAN] consensusID : consensus_8402#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1225 fasta sequence [CCGCGGACGCGTGGGGTTCGGCATCACGGGCGCGTCTATTAAGATTGCTGAACTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGTATCTTGACAACGGTGGCAATTGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACG-GCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAG-AG-GCGAGAAGTTATTC-TTTTTTGGGGAAA-GACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAACGAGAGAGATAGAGAGAGGG-AGATGA-AGAGAGAGAATCCCAAGTAAAGCGTAAGAACAGCAAGCAAATGGAGCTGTTCAGTGCATGTGCTCCGTTNAGGGTGAGTGGCCCACACTGCGTAAGTGGCACTGATCGTCAGATGCCGGCGCTGTTTCGGTGCATACGTGTATTAGTATAGCGGGTACAAGTGATATGTATCCTAGGCCATCAAATCAATCAGCGTAGTCAGGTGTAATCCTCTATTCGGATATTACGAACAAAGANGAAGAACCCAGGTCNACGAAGTGGGCAAGGCTAAATNATATCCCATTCTTAAATCGCCAGGCTCAGCAGCGGATATAATTCTTTTCCCAAACCTACAANAGTTGGGNTTGAATCCCGTGAAGTACCATCACGAGGTGTACNGCACTTACAAAANCCACGAAGAANCACGGNTAANTTAATAACCCAAGATGGCNAACTGGTNAGTAGCATTTCCCCACAAANACACCACTNCNNCAATTACCCAACTCCCACAGNACCACGGGGCCANTANAGGTCTTNAACGNGGGAAAAGGAATATGGAAGTGT] [+] EMBL BM590638 [CCGCGGACGCGTGGGGTTCGGCATCACGGGCGCGTCTATTAAGATTGCTGAACTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGTATCTTGACAACGGTGGCAATTGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACG GCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAG AG GCGAGAAGTTATTC TTTTTTGGGGAAA GACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAACGAGAGAGATAGAGAGAGGG AGATGA AGAGAG ] [+] EMBL AL934602 [ gttAAGATATCGAGGGCNTTGCGGACGANGATACGTGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGTAGTGCGAGAAGTTATTCTTTTTTTGGAGAAATGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGCAGATGACAGAGAGAGAATCCCAAGTAAAGCGTAAGAACAGCAAGCAAATGGAGCTGTTCAGTGCATGTGCTCCGTTNAGGGTGAGTGGCCCACACTGCGTAAGTGGCACTGATCGTCAGATGCCGGCGCTGTTTCGGTGCATACGTGTATTAGTATAGCGGGTACAAGTGATATGTATCCTAGGCCATCAAATCAATCAGCGTAGTCAGGTGTAATCCTCTATTCGGATATTACGAACAAAGANGAAGAACCCAGGTCNACGAAGTGGGCAAGGCTAAATNATATCCCATTCTTAAATCGCCAGGCTCAGCAGCGGATATAATTCTTTTCCCAAACCTACAANAGTTGGGNTTGAATCCCGTGAAGTACCATCACGAGGTGTACNGCACTTACAAAANCCACGAAGAANCACGGNTAANTTAATAACCCAAGATGGCNAACTGGTNAGTAGCATTTCCCCACAAANACACCACTNCNNCAATTACCCAACTCCCACAGNACCACGGGGCCANTANAGGTCTTNAACGNGGGAAAAGGAATATGGAAGTGT] consensusID : consensus_8402#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 832 fasta sequence [CAATCCCCCNGGTTAAGATATCGAGGCATTGCGGCACGAGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTCACCATCACGAAGTANAGCCGCACTAGAGGCGAGAAGTTATTCTTTTCTTGGAGAAAGACTACAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTCTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGCGTGATCGTGATCATTAGTGTAGATAAACACANAGACCGATNCCACGAGCAAATGTATACATTCCAAAAAACATATCTTATCCACTCCAGCACAAGGCATAGTTAAAGGGAAAGAATTGTCATGTGACTACAGAGAGAATGACCANAAATNCCTGGCCCGATATATCAGANGCGGNGGGGTTNTGCCTACGCAAGAAACGACTAACAGGGGACCACTCGGGCCATNGTATCTGGAATAACCGCGTCTTTTNACGTGAAAGGGATACGATCCNCTCCTNNAATCATACTTTGTAAAAGTTTAAGCAATACTANCCCACAGCGGAANTAATACGNTACCCTGNATNCATAG] [+] EMBL AL932346 [CAATCCCCCNGGTTAAGATATCGAGGCATTGCGGCACGAGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTCACCATCACGAAGTANAGCCGCACTAGAGGCGAGAAGTTATTCTTTTCTTGGAGAAAGACTACAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTCTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGCGTGATCGTGATCATTAGTGTAGATAAACACANAGACCGATNCCACGAGCAAATGTATACATTCCAAAAAACATATCTTATCCACTCCAGCACAAGGCATAGTTAAAGGGAAAGAATTGTCATGTGACTACAGAGAGAATGACCANAAATNCCTGGCCCGATATATCAGANGCGGNGGGGTTNTGCCTACGCAAGAAACGACTAACAGGGGACCACTCGGGCCATNGTATCTGGAATAACCGCGTCTTTTNACGTGAAAGGGATACGATCCNCTCCTNNAATCATACTTTGTAAAAGTTTAAGCAATACTANCCCACAGCGGAANTAATACGNTACCCTGNATNCATAG] consensusID : consensus_8402#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 831 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGCTGAGCTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGCATCTTGACAACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAG-AGGCGAGAAGTTATTC-TTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGA-----A-AGA--GAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTACTGATGTGCTCCGTTAGGGTGAGAGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCT] [+] EMBL BM625551 [CCGCGGACGCGTGGGCGGACGCGTGGGCTGAGCTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGCATCTTGACAACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAAGGCGAGAAGTTATTCTTTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGA A AGA GAGATGAAGAGAGAGAATCCC ] [+] EMBL BX626877 [ TGATCCGCATCTTGACAACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAG AGGCGAGAAGTTATTC TTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGA A AGA GAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTACTGATGTGCTCCGTTAGGGTGAGAGCCACCGCGTAAGGGCAC ] [+] EMBL BX624958 [ CCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAG AGGCGAGAAGTTATTC TTTTTTGGGGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCT] consensusID : consensus_8402#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence [CCGCCCACGCGTCCGGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTCTTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAGAGCGATATATCTTCCAACAAAGATGGTGATCGTGATCATTTTGTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGGTTTTGCTACGCAAGAACGAACGAAAGGGA] [+] EMBL BM641068 [CCGCCCACGCGTCCGGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTCTTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAGAGCGATATATCTTCCAACAAAGATGGTGATCGTGATCATTTTGTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGGTTTTGCTACGCAAGAACGAACGAAAGGGA] consensusID : consensus_8402#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGATGATCGTGATCATTTTTTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGTTTTGCTACGCAAGAACGAACGAAAGGGACCATCGGGCATGTATTATGTATTAGCGCGTCTTTTTTTTTGTTTTGACGGGGATAACGATCCCTCTCTTACATTATTACTTTGTTTTAACGTTTTAAATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT] [+] EMBL BM620565 [CCGCCCACGCGTCCGCCCACGCGTCCGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGATGATCGTGATCATTTTTTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGTTTTGCTACGCAAGAACGAACGAAAGGGACCATCGGGCATGTATTATGTATTAGCGCGTCTTTTTTTTTGTTTTGACGGGGATAACGATCCCTCTCTTACATTATTACTTTGTTTTAACGTTTTAAATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT] consensusID : consensus_8402#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 127 fasta sequence [CCGCCCACGCGTCCGATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT] [+] EMBL BM595342 [CCGCCCACGCGTCCGATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 ------------------------------------------------------------ consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 GGCAGAATCCCCCGCGGTTTAAAGACTAAAAGCGAAAAAGGCNTATCTTAAGACAAATTG 60 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 ------------------------------------------------------------ consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 TTCCCGGACAACACGCAGCAGCAGCATAGCAGAGCAGGGCAGCATGCAAGCAGAGAGAAT 120 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 ------------------------------------------------------------ consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 --------------------------------------------------------CCGC 4 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 CCCCAAGAAAGCGTAAGAACCAGCAAGCCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGG 180 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 CCGCGGACGCGTGGGGTTCGGCATCACGGGCGCGTCTATTAAGATTGCTGAACTGGATCC 60 consensus_8402#3 CCGCGGACGCGTGGG-----------CGGACGCGTGG---------GCTGAGCTGGATCC 40 consensus_8402#5 CCACGCGTCCGCCCACGCGTCCGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTC 64 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 TGATGTGGCCACCGCGTAAGTGGCACTGATCGTAGTGCCGGCGTGTTTCAGGTGCATTCG 240 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 TCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGTATCTTGAC 120 consensus_8402#3 TCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGCATCTTGAC 100 consensus_8402#5 GGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTT-CTTTTCG 123 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 GTTTAGTATAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTTCTTTTCG 300 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 AACGGTGGCAATTGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCAT 180 consensus_8402#3 AACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCAT 160 consensus_8402#5 ATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAAT-CCCAGCT 182 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 ATATACAAAAAACAAAACAGTCACAATTGGGCAGCTAATATTCCATTCTAATACCCAGCT 360 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 TTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGT 240 consensus_8402#3 TTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGT 220 consensus_8402#5 CAAAGCGATATATCTTCCAACAAAG-ATGATGATCGTGATCATTTTTTGTAGATAAAACA 241 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 CAGAGCGATATATCTTCCAACAAAGCATGGTGATCGTGATCATTTGTGTAGATNAAAACA 420 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 CATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGT 300 consensus_8402#3 CATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGT 280 consensus_8402#5 GAGACCGTATTTT-CCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTC------ 294 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 GAGACCGTATNTTTCCAGAGCAATGTATACATTCCACAAAACATTTTTATCCACTACCAG 480 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 GTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGG 360 consensus_8402#3 GTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGG 340 consensus_8402#5 -CAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCC 353 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 ACAGGCATAGTTCACAGGGACAGATTGTATGTTGACTACGAGGATGCCAGAGATCCTGCC 540 consensus_8402#2 ------------------------------------------------------------ consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 CACCAAGCTGCTCAAGAAAACGAAGC-AGCAGCTTGAGCCGTTGGATGGTACGTTGGGCT 419 consensus_8402#3 CACCAAGCTGCTCAAGAAAACGAAGC-AGCAGCTTGAGCCGTTGGATGGTACGTTGGGCT 399 consensus_8402#5 CGCTTATCGACCGCTGGGTTTTGCTA-CGCAAGAACGAACGAAAGGGACCATCGGGCATG 412 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 CGCTTATCGACGCTGGGTTTTTGCTAACGCAAGAACGAACGAAAGGGACCATCGGGCNTG 600 consensus_8402#2 -------------------------------------------------CAATCCCCCNG 11 consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 GGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGC 479 consensus_8402#3 GGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGC 459 consensus_8402#5 TATTATGTATTAGCGCGTCTTTTTTTTTG-----------TTTTGACGGGGATAACGATC 461 consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 TATTTGGTATTTAGNGGCGATNNTNTANNAAAAAGTAGATTGACGGGGATTAACGATCCC 660 consensus_8402#2 GTTAAGATATCGAGG-CATTGCGGCACGAG-ATACGGCTGCCAACACGCTGTCCAACGCG 69 consensus_8402#4 ------CCGCCCACG-CGTC-CGGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCG 52 consensus_8402#1 GGGAAGATATCGAGGGCATTGCGG-ACGAGGATACGGCTGCCAACACGCTGTCCAACGCG 538 consensus_8402#3 GGGAAGATATCGAGGGCATTGCGG-ACGAGGATACGGCTGCCAACACGCTGTCCAACGCG 518 consensus_8402#5 CCTCTCTTACATTATTACTTTGTTTTA----ACGTTTTAAATGAAA--TAGT--A-CTCG 512 consensus_8402#6 ---------------------CCGCCC----ACGCGTCCGATGAAA--TAGT--A-CTCG 30 consensus_8402#0 CTTCTCTTACATTATTACATATNGTANTAAAAGGTTTTAGATGAAAC-TAGT--AACTCG 717 * * * ** * * ** consensus_8402#2 CAAACGGCGACAGCGT-CACCATCACGAAGTANAGCCGCACTAGAGGCGAGAAGTTATTC 128 consensus_8402#4 CAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTC 112 consensus_8402#1 CAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAGAGGCGAGAAGTTATTC 598 consensus_8402#3 CAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTC 578 consensus_8402#5 CAAGC-GCTGTTA-GTTAGTTAGT-TAGTGTAGCAC--TGTTATAGCTCAT-TACTGTTG 566 consensus_8402#6 CAAGC-GCTGTTA-GTTAGTTA-----GTGTAGCAC--TGTTATAGCTCAT-TACTGTTG 80 consensus_8402#0 NAAGNAGCTGTAA-GTANAGTAA---AGTGTANCACA-TGTTATAGGTCATATACTGGTG 772 ** ** ** * *** * ** ** * * * consensus_8402#2 TTTTCTTGGAGAAAGACTACAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAAC 188 consensus_8402#4 TTTT-TTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAAC 171 consensus_8402#1 TTTT-TTGGGGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAAC 657 consensus_8402#3 TTTT-TTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAAC 637 consensus_8402#5 TTGCATGG-AACAAGCATGTAC-TGTAAGA-----TATAAGAATAGTACTTACT------ 613 consensus_8402#6 TTGCATGG-AACAAGCATGTAC-TGTAAGA-----TATAAGAATAGTACTTACT------ 127 consensus_8402#0 GTNTGCNATGGCAACCACGNCCATGNTNCC-----TGTTAACGAAATAATTACGCAAANT 827 * ** * * * * * * * * consensus_8402#2 GAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAG-AAAGCGTAAGAACAGCA 247 consensus_8402#4 GAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAG-AAAGCGTAAGAACAGCA 230 consensus_8402#1 GAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGTAAAGCGTAAGAACAGCA 717 consensus_8402#3 GAGA--------GAAAGAGAGATGAAGAGAGAGAATCCCAAG-AAAGCGTAAGAACAGCA 688 consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 CGGTCACTTACGTACNCAACNACTCAAACNTACCACCACGGGCAGTTTTGNGGCCCGCAA 887 consensus_8402#2 AGCAAA-GGAGCGTTAGTG---ATGTGCTCCGTTA-GGGTGAGGGCC----ACCGCGTAA 298 consensus_8402#4 AGCAAA-GGAGCGTTAGTG---ATGTGCTCCGTTA-GGGTGAGGGCC----ACCGCGTAA 281 consensus_8402#1 AGCAAATGGAGCTGTTCAGTGCATGTGCTCCGTTNAGGGTGAGTGGCCCACACTGCGTAA 777 consensus_8402#3 AGCAAA-GGAGCGTTACTG---ATGTGCTCCGTTA-GGGTGAGAGCC----ACCGCGTAA 739 consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 GAATANACCCCTTCAAATGAGGGCTNATATTGACCTCATGNACACGTGCCGCANGTAATA 947 consensus_8402#2 G-GGCACTGATCGT--AGTGCCGGCG-TGTTTCGGTGCATTCG-GT-TTAGT-TAGCGTA 351 consensus_8402#4 G-GGCACTGATCGT--AGTGCCGGCG-TGTTTCGGTGCATTCG-GT-TTAGT-TAGCGTA 334 consensus_8402#1 GTGGCACTGATCGTCAGATGCCGGCGCTGTTTCGGTGCATACGTGTATTAGTATAGCGGG 837 consensus_8402#3 G-GGCACTGATCGT--AGTGCCGGCG-TGTTTCGGTGCATTCG-GT-TTAGT-TAGCGTA 792 consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 NCAACNCTGGGACTGNGTNAAACCCGTGCGTGTCCCCAANAATATGNTTNGNACAATCCC 1007 consensus_8402#2 CAGTGTTGTTCT--AGCCTAATCAATAGCTGTAGTGTTTCTTCTTCGATATACAAAAAAC 409 consensus_8402#4 CAGTGTTGTTCT--AGCCTAATCAATAGCTGTAGTGTTTCTT-TTCGATATACAAAAAAC 391 consensus_8402#1 TACAAGTGATATGTATCCTAGGCCATCAAATCAATCAGCGTAGTCAGGTGTAATCCTCTA 897 consensus_8402#3 CAGTGTTGTTAT--AGCCTAATCAATAGCTGTAGTGTTTCT------------------- 831 consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 ATATTCGCCAGTGNGNANAACACAAAGCANCCNNNGACCCCCCAAGTGGGCCNCTAGAGT 1067 consensus_8402#2 AAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATC 469 consensus_8402#4 AAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAGAGCGATATATC 451 consensus_8402#1 TTCGGATATTACGAACAAAGANGAAGAACCCAGGTCNA-CGAAGTGGGCAAGGCTAAATN 956 consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 CNGTAAGCCCCTAAGGCGCACAAANGAAGGTGTTGATCGAGTNAACGAAAATGGAAGCGA 1127 consensus_8402#2 TTCCAACAAAGATGCGTGATCGTGATCATTA-GTGTAGATAAACACANAGACCG-ATNCC 527 consensus_8402#4 TTCCAACAAAGATG-GTGATCGTGATCATTTTGTGTAGATAAA-ACAGAGACCGTATTTT 509 consensus_8402#1 ATATCCCATTCTTAAATCGCCAGGCTCAGCA-GCGGATATAATTCTTTTCCCAAACCTAC 1015 consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 ATCACACNTNNNGGCGNGCAACANACTATATTTATTTTTNTTTANACTGAGAGAGAGNNG 1187 consensus_8402#2 ACGAGCAAATGTATACATTCCAAAAAACATATCTTATCCACTCCAGCACAAGGCATAGTT 587 consensus_8402#4 CCAGAGCAATGTATACATTCCAAAAA---CATTTTATCCACTCCAG-ACA-GGCATAGTT 564 consensus_8402#1 AANAGTTGGGNTTGAATCCCGTGAAGTACCATCACGAGGTGTACNGCACT-TACAAAANC 1074 consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 GANACATCAAGCNAACGACTCNCANNCCATGCCACGGGCGGCGGGGGACCGGGGCGAGGN 1247 consensus_8402#2 AAAGGGAAAGAATTGTCATGTGACTACAGAGAGAATGACCANAAATNCCTGGCCCGATAT 647 consensus_8402#4 AAGGGAAGA---TTGT-ATGTGACTAC---GAGGATG-CCAGAGATCCT--GCCCGCT-T 613 consensus_8402#1 CACGAAGAANCACGGNTAANTTAATAACCCAAGATGGCNAACTGGTNAGTAGCATTTCCC 1134 consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 GNNGNCCNNGCGGGAAGCGGGGGNGNNAGGANNNNGGNNCGGGGGANNGANCGAGAAANA 1307 consensus_8402#2 ATCAGANGCGGNGGGGTTNTGCCTACGCAAGAAACGACTAACAGGGGACCACTCGGGCCA 707 consensus_8402#4 ATCGACCGC--TGGGGTTTTGC-TACGCAAGAA-CGAACGAAAGGGA------------- 656 consensus_8402#1 CACAAANACACCACTNCNNCAATTACCCAACTCCCACAGNACCACGGGGCCANTANAGGT 1194 consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 ANGGNGANNGGGNAGAGGAGGNGGGGGAGCGCGNAACAGCCCGANANANNGCGGCGANGN 1367 consensus_8402#2 TNGTATCTGGAATAACCGCGTCTTTTNACGTGAAAGGGATACGATCCNCTCCTNNAATCA 767 consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 CTTNAACGNGGGAAAAGGAATATGGAAGTGT----------------------------- 1225 consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 NANAGANGAGCANGNGCACGAAGANCCANACANACGGGNGGACCNGGTCNNNGNNGNAGG 1427 consensus_8402#2 TACTTTGTAAAAGTTTAAGCAATACTANCCCACAGCGGAANTAATACGNTACCCTGNATN 827 consensus_8402#4 ------------------------------------------------------------ consensus_8402#1 ------------------------------------------------------------ consensus_8402#3 ------------------------------------------------------------ consensus_8402#5 ------------------------------------------------------------ consensus_8402#6 ------------------------------------------------------------ consensus_8402#0 GGNGGGGGGAGGNGGGANCGNCANCGGGNANNCACGAGGGACANANGGAGGGAAN----- 1482 consensus_8402#2 CATAG 832 consensus_8402#4 ----- consensus_8402#1 ----- consensus_8402#3 ----- consensus_8402#5 ----- consensus_8402#6 ----- consensus_8402#0 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||