Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8404 cluster # 8404       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8404#0 length = 1181 sequences # 10  

consensusID : consensus_8404#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1181
fasta sequence
                              [AAAAATCCCCCGCAAAAGAGCCTACAGATGGGATCGACCCACTGATGCTAAGCAAGGAGCGGGACCGA-CTTTGCGGCTCCGTCACACCGACCGGTGAAGGAGCGCCCATGG-ATTCATCCTCCTCCGGCAT-CAGTCGGGCGACGATTCGGAGAAGAGCCCTGAAACGCTCAAATCGTACAGCAAACCGGAATCGATCGTGCTCCCCGTGCAGCCGGTCGTAATCGATCAGATGCTGACGAGCATGGAGGACGACAAAATCGAACGACTGCTTAACGGCGAAACACACACGAACGATGCAACGCTCGAATCGCTCAAGCGGCAATGGCAGTCGACGGAGGGCAGGATCCGAAAGCCCAAATTTGCTTCCAACTTTTCCGAAGCGCGTCGGCTGATGAAAGTGCGCAAGCAGATGCAGCGCCAGGAGCAGAAATGTCGCGAGCAGGCGCTAGCGATGGCGAAAAAGTACATCAGCGAAAGCAAAGCATTCGGCGGCCGCTGTATGGAGGATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGCTCACCGTGGCAACGCCAAAGGTAGCGAAACGAGCTGCCACGCCGGGTGTGGCGGGCAGTGGCAAGGCAAAGCGTACCGCGACCGTTAACGGGGTGGCGAAAAAGCTGGACCTTACGGTGGAAGACGAAAGCAAGCGGGCCGGTTTGGCGACGATCCGCAAGCAACGATCCATCAGGAATCGGTTGGTTGAGAAAAGCACACCACCGTCCGTCGGAACGGACGCATAAGAAGGGCGTGTGTGTGTTTGTGTGGATGTGCATGTGTAGAGTAACTATTAAAGGCGTAGTCAGACAAAGACAACAATGTCCAGTTTCCAAGGGAGGGTTTTATTAACTGTTAGGCTTTGATTTGGATGATCATTACGAGAGTAAATAAAGAGTTATATTAGTTTTATATCACGAGTTTTGC]

[+] EMBL BX623248             [AAAAATCCCCCGCAAAAGAGCCTACAGATGGGATCGACCCACTGATGCTAAGCAAGGAGCGGGACCGA CTTTGCGGCTCCGTCACACCGACCGGTGAAGGAGCGCCCATGGNATTCATCCTCCTCCGGCATCCAGTCGGGCGACGATTCGGAGAAGAGCCCTGAAACGCTCAAATCGTACAGCAAACCGGAATCGATCGTGCTCCCCGTGCAGCCGGTCGTAATCGATCAGATGCTGACGAGCATGGAGGACGACAAAATCGAACGACTGCTTAACGGCGAAACACACACGAACGATGCAACGCTCGAATCGCTCAAGCGGCAATGGCAGTCGACGGAGGGCAGGATCCGAAAGCCCAAATTTGCTTCCAACTTTTCCGAAGCGCGTCGGCTGATGAAAGTGCGCAAGCAGATGCAGCGCCAGGAGCAGAAATGTCGCGAGCAGGCGCTAGCGATGGCGAAAAAGTACATCAGCGAAAGCAAAGCATTCGGCGGCCGCTGTATGGAGGATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AL933113             [                                                               cCCGAGGTTTGCGGCTCCGTCACACCGACCGGTGAAGGAGCGCCCATGG ATTCATCCTCCTCCGGCAT CAGTCGGGCGACGATTCGGAGAAGAGCCCTGAAACGCTCAAATCGTACAGCAAACCGGAATCGATCGTGCTCCCCGTGCAGCCGGTCGTAATCGATCAGATGCTGACGAGCATGGAGGACGACAAAATCGAACGACTGCTTAACGGCGAAACACACACGAACGATGCAACGCTCGAATCGCTCAAGCGGCAATGGCAGTCGACGGAGGGCAGGATCCGAAAGCCCAAATTTGCTTCCAACTTTTCCGAAGCGCGTCGGCTGATGAAAGTGCGCAAGCAGATGCAGCGCCAGGAGCAGAAATGTCGCGAGCAGGCGCTAGCGATGGCGAAAAAGTACATCAGCGAAAGCAAAGCATTCGGCGGCCGCTGTATGGAGGATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX607467             [                                                                                                                                                                                                                                 CGATCAGATGCTGACGAGCATGGAGGACGACAAAATCGAACGACTGCTCAACGGCGAAACACACACGAACGATGCAACGCTCGAATCGCTCAAGCGGCAATGGCAGTCGACGGAGGGCAGGATCCGAAAGCCCAAATTTGCTTCCAACTTTTCCGAAGCGCGTCGGCTGATGAAAGTGCGCAAGCAGATGCAGCGCCAGGAGCAGAAATGTCGTGAGCAGGCGCTAGCGATGGCGAAAAAGTACATCAGCGAAAGCAAAGCATTCGGCGGCCGCTGTATGGAGGATCAGGGCATCGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGCGGAGGGAGCGATCCGGAGCTACGGTACTTCCCCGAGGAGCATGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGCTCATCTACTCGCTTACCGTGGCAACGCCAAAGGTAGCAAAACGAGCTGCCACGCCGGGTACGGCGGGCAGTGGCAAGGCAAAGCGTACCGCGACCGTTAACGGGGTAGCGAAAAAGCTGGACCTTACTGTGGAAGACGAAAGCAAGCGGGCCGGTTTGGCGACGATCCGCAAG                                                                                                                                                                                                                                                       ]
[+] EMBL BX618348             [                                                                                                                                                                                                                                                                                                                                                                                  AACTTTTCCGAATCGCGTCGGCTGATGTTAGTGCGCAAGCAGATGCAGCGCCAGGAGCAGAAATGTCGCGAGCAGGCGCTAGCGATGGCGAAAAAGTACATCAGCGAAAGCAAAGCATTCGGCGGCCGCTGTATGGAGGATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGCTCACCGTGGCAACGCCAAAGGTAGCGAAACGAGCTGCCACGCCGGGTGTGGCGGGCAGTGGCAAGGCAAAGCGTACCGCGACCGTTAACGGGGTGGCGAAAAAGCTGGACCTTACGGTGGAAGACGAAAGCAAGCGGGCCGGTTTGGCGACGATCCGCAAGCAACGATCCATCAGGAATCGGTTGGTTGAGAAAAGCACACCACCGTCCGTCGGAACGGACGCATAAGAAGGGCGTGTGTGTGTTTGTGTGGATGTGCATGTGTAGAGTAACTATTAAAGGCGTAGTCAGACAAAGACAACAATGTCCAGTTTCCAAGGGAGGGTTTTATTAACTGTTAGGCTTTGATTTGGATGATCATTACGAGAGTAAATAAAGAGTTATATTAGTTTTATATCACGAGTTTTGC]
[+] EMBL AGA281342            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTATGGAGGATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGC                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AGA280447            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGCTCACCGTGGCAACGCCAAAGGTAGCGAAACGAGCTGCCACGCCGGGTGTGGCGGGCAGTGGCAAGGCAAAGCGTACCGCGACCGTTAACGGGGTGGCGAAAAAGCTGGACCTTACGGTGGAAGACGATAGCAAGCGGGCCGGTTTGGCG                                                                                                                                                                                                                                                                   ]
[+] EMBL AGA284307            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGGGACGCGTAAATCGCCCGGGCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCG                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AGA282140            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGCTCACCGTGGCAACGCCAAAGGTAGCGAAACGAGCTGCCACGCCGGGTGTGGCGGGCAGTGGCAAGGCAAAGCGTACCGCGACCGTTAACGGGGTGGCGAAAAAGCTGGACCTTACGGTGGAAGACGAAAGCAAGCGGGCCGGTTTGGCGACGATCCGCAAGCAACGATCCATCAGGAATCGGTTGGGTGAGAAAAGCACACCACCGTCCGTC                                                                                                                                                                                                    ]
[-] EMBL AGA285610            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCGGAACCGACGGGGGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGCTCACCGTGGCAACGCCAAAGGTAGCGAAACGAGCTGCCACGCCGGGTGTGGCGGGCAGTGGCAAGGCAAAGCGTACCGCGACCGTTAACGGGGTGGCGAAAAAGCTGGACCTTACGGTGGAAGACGAAAGCAAGCGGGCCGGTTTGGCGACGATCCGCAAGCAACGATCCATCAGGAATCGGTTGGTTGAGAAAAGCACAC                                                                                                                                                                                                               ]
[-] EMBL AGA282151            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATGCGGAGCTACGGTACTTCCCCGAGGAGCAGGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGTCACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGCTCACCGTGGCAACGCCAAAGGTAGCGAAACGAGCTGCCACGCCGGGTGTGGCGGGCAGTGGCAAGGCAAAGCGTACCGCGACCGTTAACGGGGTGGCGAAAAAGCTGGACCTTACGGTGGAAGACGAAAGCAAGCGGGCCGGTTTGGCGACGATCCGCAAGCAACGATCCATCAGGAATCGGTTGGGTGAGAAAAGCACACCAC                                                                                                                                                                                                            ]


>consensus_8404#0 AAAAATCCCCCGCAAAAGAGCCTACAGATGGGATCGACCCACTGATGCTAAGCAAGGAGC GGGACCGACTTTGCGGCTCCGTCACACCGACCGGTGAAGGAGCGCCCATGGATTCATCCT CCTCCGGCATCAGTCGGGCGACGATTCGGAGAAGAGCCCTGAAACGCTCAAATCGTACAG CAAACCGGAATCGATCGTGCTCCCCGTGCAGCCGGTCGTAATCGATCAGATGCTGACGAG CATGGAGGACGACAAAATCGAACGACTGCTTAACGGCGAAACACACACGAACGATGCAAC GCTCGAATCGCTCAAGCGGCAATGGCAGTCGACGGAGGGCAGGATCCGAAAGCCCAAATT TGCTTCCAACTTTTCCGAAGCGCGTCGGCTGATGAAAGTGCGCAAGCAGATGCAGCGCCA GGAGCAGAAATGTCGCGAGCAGGCGCTAGCGATGGCGAAAAAGTACATCAGCGAAAGCAA AGCATTCGGCGGCCGCTGTATGGAGGATCAGGGCATTGAGCTGGAGTTTGTGTGCGACGG GACGCGTAAATCGCCCGGGCCGACCATTTCTTCCCCAATCCCGAAGGCGGAACCGACGGG GGAGAGTGTGCAGGTGGGTGGAGGGAGCGATGCGGAGCTACGGTACTTCCCCGAGGAGCA GGAAGTGTTCCAGCTCGACGAGAAGCGGCTCGACTTTCTGCGCTCCAAGACGGAGGGCGT CACGTTCGGTAAGAACTTTAAGGTGCAGCATTACCGTACGATCGTCTACTCGCTCACCGT GGCAACGCCAAAGGTAGCGAAACGAGCTGCCACGCCGGGTGTGGCGGGCAGTGGCAAGGC AAAGCGTACCGCGACCGTTAACGGGGTGGCGAAAAAGCTGGACCTTACGGTGGAAGACGA AAGCAAGCGGGCCGGTTTGGCGACGATCCGCAAGCAACGATCCATCAGGAATCGGTTGGT TGAGAAAAGCACACCACCGTCCGTCGGAACGGACGCATAAGAAGGGCGTGTGTGTGTTTG TGTGGATGTGCATGTGTAGAGTAACTATTAAAGGCGTAGTCAGACAAAGACAACAATGTC CAGTTTCCAAGGGAGGGTTTTATTAACTGTTAGGCTTTGATTTGGATGATCATTACGAGA GTAAATAAAGAGTTATATTAGTTTTATATCACGAGTTTTGC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)