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Anopheles gambiae
cluster # 8418 cluster # 8418       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8418#0 length = 1227 sequences # 3  
consensus_8418#1 length = 939 sequences # 4  
consensus_8418#2 length = 664 sequences # 1  
consensus_8418#3 length = 545 sequences # 1  
consensus_8418#4 length = 150 sequences # 1  

consensusID : consensus_8418#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1227
fasta sequence
                              [GCAAGTGCTCTGCTGGATGGACAGCTGGCACGGACTGACTATGCAGGACATCCGTGAGCTGGAGGACAAAACCAAAGAGGAGCTGGACAAACAGCGCCATGTCGGTGAGGTGCGCGGTATGCGTGCCGAAAGTGACTAGATCATCCCATCCGCCTCCCCCCTCCCGGGTATCGATCAACCGTTTGCTATAAGCTGTGAGCAAAAACAATGAAGAAAACTACCGAACCGGGCGTAGGAATGTGTTGGCTTGGTAATGCGACGTTTGGGGTGTCCACCATTCGGCCCCATGCTCATTCTCCTTCTGAGAGCCGTGCGTGGCCTGTTGCTCCGTTGTGAGGGGGTTATTTTTTCCGGAAGGGCGTCTGATAAAACGGAATCGAAGCTGGGGATATATAGGAGGAGGAGGAGGAGGAGGAGTGTGTTTATTATTATTTTTTTCAGTTTTTGCTCGGTTTTTGTCGTAAGCTTTGTTTTGATTTATCATTTTTGTTTCGTTTTTCTTCATCTCTGTTTTACCGGCAAAGCAAACGCATGTTTGGTGGAAAAGAGACAGAGTGAAAAGAAGATAGAAAAGTGTAAGAAGAAGTGGCAGGGTTAAACGGGAAGTATAATTATGGTGGTGTTATAAATGCAACTAGGCAACACGGGACAAAAACATAAACTATCAGTAGGATCGAAAGCATGAATTAGTACAGAGAGTGTGTGTGTGCGCGCGTGTTGTCGGTGAGTGAGCAGGTTCACCGTGTGAGTGCAGCAGGATCGCCAGACAAGAGTCAGATAAAAATAGTGCAAAACACACATTGCAATAGCGTAAGCAAAACCAGTAGACAATTACTGAACTCACACGCATGTGCACAGCAGCACCCAAGCTCGAGTAGAGGATGGCCGCAGGACGTAACATTCGCAAACGTTAAACCATTTACCCCCTCCCATAACTGAAAAAAACACACATAGAATGGGTGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGAGATAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGATGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAACCATTGTGTGTAGCATCGTCGTGCAACCACAGTGCGGCGATTGGCGGACGGAAATCGTCTACTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTG]

[+] EMBL BX611565             [GCAAGTGCTCTGCTGGATGGACAGCTGGCACGGACTGACTATGCAGGACATCCGTGAGCTGGAGGACAAAACCAAAGAGGAGCTGGACAAACAGCGCCATGTCGGTGAGGTGCGCGGTATGCGTGCCGAAAGTGACTAGATCATCCCATCCGCCTCCCCCCTCCCGGGTATCGATCAACCGTTTGCTATAAGCTGTGAGCAAAAACAATGAAGAAAACTACCGAACCGGGCGTAGGAATGTGTTGGCTTGGTAATGCGACGTTTGGGGTGTCCACCATTCGGCCCCATGCTCATTCTCCTTCTGAGAGCCGTGCGTGGCCTGTTGCTCCGTTGTGAGGGGGTTATTTTTTCCGGAAGGGCGTCTGATAAAACGGAATCGAAGCTGGGGATATATAGGAGGAGGAGGAGGAGGAGGAGTGTGTTTATTATTATTTTTTTCAGTTTTTGCTCGGTTTTTGTCGTAAGCTTTGTTTTGATTTATCATTTTTGTTTCGTTTTTCTTCATCTCTGTTTTACCGGCAAAGCAAACGCATGTTTGGTGGAAAAGAGACAGAGTGAAAAGAAGATAGAAAAGTGTAAGAAGAAGTGGCAGGGTTAAACGGGAAGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM607495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGTTTCGTTTTTCTTCATCTCTGTTTTACCGGCAAAGCAAACGCATGTTTGGTGGAAAAGAGACAGAGTGAAAAGAAGATAGAAAAGTGTAAGAAGAAGTGGCAGGGTTAAACGGGAAGTATAATTATGGTGGTGTTATAAATGCAACTAGGCAACACGGGACAAAAACATAAACTATCAGTAGGATCGAAAGCATGAATTAGTACAGAGAGTGTGTGTGTGCGCGCGTGTTGTCGGTGAGTGAGCAGGTTCACCGTGTGAGTGCAGCAGGATCGCCAGACAAGAGTCAGATAAAAATAGTGCAAAACACACATTGCAATAGCGTAAGCAAAACCAGTAGACAATTACTGAACTCACACGCATGTGCACAGCAGCACCCAAGCTCGAGTAGAGGATGGCCGCAGGACGTAACATTCGCAAACGTTAAACCATTTACCCCCTCCCATAACTGAAAAAAACACACATAGAATGGGTGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGAGATAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGATGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAACCATTGTGTGTAGCATCGTCGTGCAACCACAGTG                                                                         ]
[+] EMBL BX615623             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCACCCAAGCTCGAGTAGAGGATGGCCGCAGGACGTAACATTCGCAAACGTTAAACCATTTACCCCCTCCCATAACTGAAAAAAACACACATAGAATGGGTGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGAGATAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGATGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAACCATTGTGTGTAGCATCGTCGTGCAACCACAGTGCGGCGATTGGCGGACGGAAATCGTCTACTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTG]


>consensus_8418#0 GCAAGTGCTCTGCTGGATGGACAGCTGGCACGGACTGACTATGCAGGACATCCGTGAGCT GGAGGACAAAACCAAAGAGGAGCTGGACAAACAGCGCCATGTCGGTGAGGTGCGCGGTAT GCGTGCCGAAAGTGACTAGATCATCCCATCCGCCTCCCCCCTCCCGGGTATCGATCAACC GTTTGCTATAAGCTGTGAGCAAAAACAATGAAGAAAACTACCGAACCGGGCGTAGGAATG TGTTGGCTTGGTAATGCGACGTTTGGGGTGTCCACCATTCGGCCCCATGCTCATTCTCCT TCTGAGAGCCGTGCGTGGCCTGTTGCTCCGTTGTGAGGGGGTTATTTTTTCCGGAAGGGC GTCTGATAAAACGGAATCGAAGCTGGGGATATATAGGAGGAGGAGGAGGAGGAGGAGTGT GTTTATTATTATTTTTTTCAGTTTTTGCTCGGTTTTTGTCGTAAGCTTTGTTTTGATTTA TCATTTTTGTTTCGTTTTTCTTCATCTCTGTTTTACCGGCAAAGCAAACGCATGTTTGGT GGAAAAGAGACAGAGTGAAAAGAAGATAGAAAAGTGTAAGAAGAAGTGGCAGGGTTAAAC GGGAAGTATAATTATGGTGGTGTTATAAATGCAACTAGGCAACACGGGACAAAAACATAA ACTATCAGTAGGATCGAAAGCATGAATTAGTACAGAGAGTGTGTGTGTGCGCGCGTGTTG TCGGTGAGTGAGCAGGTTCACCGTGTGAGTGCAGCAGGATCGCCAGACAAGAGTCAGATA AAAATAGTGCAAAACACACATTGCAATAGCGTAAGCAAAACCAGTAGACAATTACTGAAC TCACACGCATGTGCACAGCAGCACCCAAGCTCGAGTAGAGGATGGCCGCAGGACGTAACA TTCGCAAACGTTAAACCATTTACCCCCTCCCATAACTGAAAAAAACACACATAGAATGGG TGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGAGATAATATTGCGCACCCATC GCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGATGTGCGCATGTGGATCTG TGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAACCATTGTGTGTAGCATCGTC GTGCAACCACAGTGCGGCGATTGGCGGACGGAAATCGTCTACTGAAAGTAGATATCCGAT AAACTACTCACAGCTACATACTGTTTG



consensusID : consensus_8418#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 939
fasta sequence
                              [GATTTCGTCGCATCGTGCCGTGCGGTTAGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTTTGCCAAAGCGAAAAGACAACTCCCCCGAATCCGTGTGCTTCCCCCTGTGTGCCGCCCCATCACCTTCGGCAGACCACAAGTGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGAGATAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGATGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAACCA--TTGTGTGTAGCATCGTCGTGCAACCACAGTGCGG-CG-ATTGGCGGACGGAAATCGTCTACTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTGGCGATGCAAGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGACATAGCAAACAAGCAATATTAGTTGTGGGCTGCTACACTTACTGCCCTTCCCGATGTCTTACGGGGCGACAACTTGAGCTAGTGATAAATAATTAGAGCAGACTAACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCGAACGAGAAATGCCAT-GGAAGAATATAGAGAATGCATAAAGGGAAAGGAAGACAGGAAGC-AACATACAGACAAACGTACATTGGAAGTGGATAAGAAAGTGAC---AAAAAAAATGCTAGAGAAAAGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACACCACTTGAAAAATAAAAAAAAAAAAAAACAAAAAAAGGCCACATGTGCTCGAGCTG]

[+] EMBL BX625186             [GATTTCGTCGCATCGTGCCGTGCGGTTAGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTTTGCCAAAGCGAAAAGACAACTCCCCCGAATCCGTGTGCTTCCCCCTGTGTGCCGCCCCATCACCTTCGGCAGACCACAAGTGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGAGATAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGATGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAACCA  TTGTGTGTAGCATCGTCGTGCAACCACAGTGCGG CG ATTGGCGGACGGAAATCGTCTACTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTGGCGATGCAAGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGACATAGCAAACAAGCAATATTAGTTGTGGGCTGCTACACTTACTGCCCTTCCCGATGTCTTACGGGGCGACAACTTGAGCTAGTGATAAATAATTAGAGCAGACTAACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCGAACGAGAAATGCCATGGGAAGAATATAGAGAATGCATAAAGGGGAAGGAAGACAGGAAGC AACCTACAGACNAACGTACATTGG                                                                                                                                            ]
[+] EMBL CNS09E3T             [                                                                                                                                                                                                  CCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGATGTGCGCATGTGGATCTGTGTGTGAAAACATTT     ACACAACAACTAATCTTCAACCATGTTGTGTGTAGCATCGTCGTGCAACCACAGTGCGG CG ATTGGCGGACGGAAATCGTCTACTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTGGCGATGCAAGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGACATAGCAAACAAGCAATATTAGTTGTGGGCTGCTACACTTACTGCCCTTCCCGATGTCTTACGGGGCGACAACTTGAGCTAGTGATAAATAATTAGAGCAGACTAACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCCAACGAGAAATGCCAT GGAAGAATATAGAGAATGC                                                                                                                                                                                              ]
[+] EMBL BM657447             [                                                                                                                                                                                                                                                                                                                                             ccGCGGACGCGTGGGCGGACG     CGTGGGCTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTGGCGATGCAAGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGACATAGCAAACAAGCAATATTAGTTGTGGGCTGCTACACTTACTGCCCTTCCCGATGTCTTACGGGGCGACAACTTGAGCTAGTGATAAATAATTAGAGCAGACTAACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCGAACGAGAAATGCCAT GGAAGAATATAGAGAATGCATAAAGGGAAAGGAAGACAGGAAGCAAACATACAGACAAACGTACATTGGAAGTGGATAAGAAAGTGAC   AAAAAAAATGCTAGAGAAAAGAAGAAAGGGAATAGGAAA                                                                               ]
[+] EMBL CNS08JQQ             [                                                                                                                                                                                                                                                                                                                                                                                                          cattTACATACTGTTTGGCGATGC AGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGACATAGCAAACAAGCAATATTAGTTGTGGGCTGCTACACTTACTGCCCTTCCCGATGTCTTACGGGGCGACAACTTGAGCTAGTGATAAATAAGTAGAGCAGACTAACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCGAACGAGAAATGCCAT GGAAGAATATAGAGAATGCATAAAGGGAAAGGAAGACAGGAAGCAAACATACAGACAAACGTACATTGGAAGCGGAAGAGAAAGTGACAAAAAAAAAAATGCTAGAGAAAAGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACACCACTTGAAAAATAAAAAAAAAAAAAAACAAAAAAAGGCCACATGTGCTCGAGCTG]


>consensus_8418#1 GATTTCGTCGCATCGTGCCGTGCGGTTAGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTT TGCCAAAGCGAAAAGACAACTCCCCCGAATCCGTGTGCTTCCCCCTGTGTGCCGCCCCAT CACCTTCGGCAGACCACAAGTGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGA GATAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGT GATGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAA CCATTGTGTGTAGCATCGTCGTGCAACCACAGTGCGGCGATTGGCGGACGGAAATCGTCT ACTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTGGCGATGCAAGCTG CAAAGAAAACTACTACACAAACAAACATACCTTGACATAGCAAACAAGCAATATTAGTTG TGGGCTGCTACACTTACTGCCCTTCCCGATGTCTTACGGGGCGACAACTTGAGCTAGTGA TAAATAATTAGAGCAGACTAACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTA TATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTA TCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCGA ACGAGAAATGCCATGGAAGAATATAGAGAATGCATAAAGGGAAAGGAAGACAGGAAGCAA CATACAGACAAACGTACATTGGAAGTGGATAAGAAAGTGACAAAAAAAATGCTAGAGAAA AGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACACCACTTGAAAAATAAAA AAAAAAAAAAACAAAAAAAGGCCACATGTGCTCGAGCTG



consensusID : consensus_8418#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence
                              [CCGCCCACGCGTCCGGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTTTGCCAAAGCGAAAAGACAACTCCCCCGACATTAGCAGATTTCCACAGATCCGTGTGCTTCCCCCTGTGTGCCGCCCCATCACCTTCGGCAGACCACAAGTGAAGTTAATCCAAAAGTGACATTCGCACTGTAAAGGAGTGGTGCAGAAAGGAAAGGCCGTATTTTTGTGTGGCGAAGATAAACCCGTTCCGAGGAGGTGCAAAATGTTGATCAAAGAATTTCGAGTTACGCTGCCATTGACGGTCGAAGAGTACCAAGTAGCACAGCTGTACTGCGTGGCGGAAGTGTCCAAAAACGAAACCGGTGGCGGCGAAGGTATTGAGGTGCTGAAAAATGAACCCTTTGACAACTATCCACTGCTCGGTGGAAAGTACAATTCCGGCCAGTATACGTACAAAATCTATCATTTGGCCTCGAAGGTACCGGCCTTCATCCGGCTGCTCGCACCCAAGGGATCGCTAGAAGTGCACGAGGAAGCCTGGAATGCATATCCCGTACTGCCGGACAGTCATAACCAATCCCAATTGGATGAAGGAGAAGATGACCATCACGATCGACACGTACAGTATCGATGGTGACGACGATCTCGAGAACGCCCCATGAGTTGACGCCGGAAA]

[+] EMBL BM625198             [CCGCCCACGCGTCCGGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTTTGCCAAAGCGAAAAGACAACTCCCCCGACATTAGCAGATTTCCACAGATCCGTGTGCTTCCCCCTGTGTGCCGCCCCATCACCTTCGGCAGACCACAAGTGAAGTTAATCCAAAAGTGACATTCGCACTGTAAAGGAGTGGTGCAGAAAGGAAAGGCCGTATTTTTGTGTGGCGAAGATAAACCCGTTCCGAGGAGGTGCAAAATGTTGATCAAAGAATTTCGAGTTACGCTGCCATTGACGGTCGAAGAGTACCAAGTAGCACAGCTGTACTGCGTGGCGGAAGTGTCCAAAAACGAAACCGGTGGCGGCGAAGGTATTGAGGTGCTGAAAAATGAACCCTTTGACAACTATCCACTGCTCGGTGGAAAGTACAATTCCGGCCAGTATACGTACAAAATCTATCATTTGGCCTCGAAGGTACCGGCCTTCATCCGGCTGCTCGCACCCAAGGGATCGCTAGAAGTGCACGAGGAAGCCTGGAATGCATATCCCGTACTGCCGGACAGTCATAACCAATCCCAATTGGATGAAGGAGAAGATGACCATCACGATCGACACGTACAGTATCGATGGTGACGACGATCTCGAGAACGCCCCATGAGTTGACGCCGGAAA]


>consensus_8418#2 CCGCCCACGCGTCCGGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTTTGCCAAAGCGAAA AGACAACTCCCCCGACATTAGCAGATTTCCACAGATCCGTGTGCTTCCCCCTGTGTGCCG CCCCATCACCTTCGGCAGACCACAAGTGAAGTTAATCCAAAAGTGACATTCGCACTGTAA AGGAGTGGTGCAGAAAGGAAAGGCCGTATTTTTGTGTGGCGAAGATAAACCCGTTCCGAG GAGGTGCAAAATGTTGATCAAAGAATTTCGAGTTACGCTGCCATTGACGGTCGAAGAGTA CCAAGTAGCACAGCTGTACTGCGTGGCGGAAGTGTCCAAAAACGAAACCGGTGGCGGCGA AGGTATTGAGGTGCTGAAAAATGAACCCTTTGACAACTATCCACTGCTCGGTGGAAAGTA CAATTCCGGCCAGTATACGTACAAAATCTATCATTTGGCCTCGAAGGTACCGGCCTTCAT CCGGCTGCTCGCACCCAAGGGATCGCTAGAAGTGCACGAGGAAGCCTGGAATGCATATCC CGTACTGCCGGACAGTCATAACCAATCCCAATTGGATGAAGGAGAAGATGACCATCACGA TCGACACGTACAGTATCGATGGTGACGACGATCTCGAGAACGCCCCATGAGTTGACGCCG GAAA



consensusID : consensus_8418#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 545
fasta sequence
                              [TGCGGAATTCCTCGAGAACTGTTGGCCCACTGGACTCACAGAAACATACTGTTTGGCGATGCAAGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGTACATAGCAAAAAAGCAATATTAGTTTTGGGCTGCTAAACTTACTGCCCTTCCCCATTTCTTACGGGGCCACAACTTGAGCTAGTGATAAATAAGTAGAGCAGACTTACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCGAACGAGAAATGCCATGGAAGAATATAGAGAATGCATAAAGGGAAAGGAAGACAGGAAGCAAACATACAGACAAACGTACATTGGAAGCGGAAGAGAAAGTGACAAAAAAAAAAATGCTAGAGAAAAGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACACCACTAAAA]

[-] EMBL CNS08JQR             [TGCGGAATTCCTCGAGAACTGTTGGCCCACTGGACTCACAGAAACATACTGTTTGGCGATGCAAGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGTACATAGCAAAAAAGCAATATTAGTTTTGGGCTGCTAAACTTACTGCCCTTCCCCATTTCTTACGGGGCCACAACTTGAGCTAGTGATAAATAAGTAGAGCAGACTTACACGCGCATTGCAATTGCAAAACAAACAAACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACACGCGAGCGAACGAGAAATGCCATGGAAGAATATAGAGAATGCATAAAGGGAAAGGAAGACAGGAAGCAAACATACAGACAAACGTACATTGGAAGCGGAAGAGAAAGTGACAAAAAAAAAAATGCTAGAGAAAAGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACACCACTAAAA]


>consensus_8418#3 TGCGGAATTCCTCGAGAACTGTTGGCCCACTGGACTCACAGAAACATACTGTTTGGCGAT GCAAGCTGCAAAGAAAACTACTACACAAACAAACATACCTTGTACATAGCAAAAAAGCAA TATTAGTTTTGGGCTGCTAAACTTACTGCCCTTCCCCATTTCTTACGGGGCCACAACTTG AGCTAGTGATAAATAAGTAGAGCAGACTTACACGCGCATTGCAATTGCAAAACAAACAAA CAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTACA ATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCCATTTGCAAAAGCACACTAGTACA CGCGAGCGAACGAGAAATGCCATGGAAGAATATAGAGAATGCATAAAGGGAAAGGAAGAC AGGAAGCAAACATACAGACAAACGTACATTGGAAGCGGAAGAGAAAGTGACAAAAAAAAA AATGCTAGAGAAAAGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACACCAC TAAAA



consensusID : consensus_8418#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 150
fasta sequence
                              [CCGGGACTGACGATGCAGGACATCCGTGAGCTGGAGGACAAAACCAAAGAGGAGCTGGACAAACAGCGCCATGTCGGTGAGGTGCGCGGGATGCGTGCCGAAAGTGACTAAATCATCCCATTTGCCTCCCCCCCCCCCTCCCGGGTACCG]

[+] EMBL BM612915             [CCGGGACTGACGATGCAGGACATCCGTGAGCTGGAGGACAAAACCAAAGAGGAGCTGGACAAACAGCGCCATGTCGGTGAGGTGCGCGGGATGCGTGCCGAAAGTGACTAAATCATCCCATTTGCCTCCCCCCCCCCCTCCCGGGTACCG]


>consensus_8418#4 CCGGGACTGACGATGCAGGACATCCGTGAGCTGGAGGACAAAACCAAAGAGGAGCTGGAC AAACAGCGCCATGTCGGTGAGGTGCGCGGGATGCGTGCCGAAAGTGACTAAATCATCCCA TTTGCCTCCCCCCCCCCCTCCCGGGTACCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8418#0      ----------GCAAGTGCTCTGCTGGATGGACAGCTGGCACGGACTGACTATGCAGGACA 50
consensus_8418#4      --------------------------------------CCGGGACTGACGATGCAGGACA 22
consensus_8418#1      GATTTCGTCGCATCGTGCCGTGCGGTTAGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTT 60
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      -------------CCGCCCACGCGTCCGGAGATTTCGTGCCGTGTCGTGTTCGTTCTTTT 47
                                                                                  

consensus_8418#0      TCCGTGAGCTGGAGGACAAAACCAAAGAGGAGCTGGACAAACAGCGCCATGTCGGTGAGG 110
consensus_8418#4      TCCGTGAGCTGGAGGACAAAACCAAAGAGGAGCTGGACAAACAGCGCCATGTCGGTGAGG 82
consensus_8418#1      TGCCAAAGCGAAAAGACAACTCCCCCGAATCCGTGTGCTTCCCCCTGTGTGCCGCCCCAT 120
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      TGCCAAAGCGAAAAGACAACTCCCCCGA---CATTAGCAGATTTCCACAGATCCGTGTGC 104
                                                                                  

consensus_8418#0      TGCGCGGTATGCGTGCCGAAAGTGACTAGATCATCCCATCCGCCTCCCCCC-----TCCC 165
consensus_8418#4      TGCGCGGGATGCGTGCCGAAAGTGACTAAATCATCCCATTTGCCTCCCCCCCCCCCTCCC 142
consensus_8418#1      CACCTTCGGCAGACCACAAGTGAATTCCGAATAAATTGCAATAGTGTGAAT-----AGAG 175
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      TTCCCCCTGTGTGCCGCCCCATCACCTTCGGCAGACCACAAGTGAAGTTAA-------TC 157
                                                                                  

consensus_8418#0      GGGTATCGATCAACCGTTTGCTATAAGCTGTGAGCAAAAACAATGAAGAAAACTACCGAA 225
consensus_8418#4      GGGTACCG---------------------------------------------------- 150
consensus_8418#1      CAAGAGATAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAA 235
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      CAAAAGTGACATTCGCACTGTAAAGGAGTG-GTGCAGAAAGGAAAGGCCGTATTTTTGTG 216
                                                                                  

consensus_8418#0      CCGGGCGTAGGAATGTGTTGGCTTGGTAATGCGACGTTTGGGGTGTCCACCATTCGGCCC 285
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      AATGTGATGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATC 295
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      TGGCGAAGATAAACCCGTTC-CGAGGAGGTGCAAAATGTTGATCAAAGAATTTCGAGTTA 275
                                                                                  

consensus_8418#0      CATGCTCATTCTCCTTCTGAGAGCCGTGCGTGGCCTGTTGCTCCGTTGTGAGGGGGTTAT 345
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      TTCAACCATTGTGTGTAGCATCGTCGTGCAACCACAGTGCGGCGATTGGCGGACGGAAAT 355
consensus_8418#3      ---------------------------------------------------TGCGGAATT 9
consensus_8418#2      CGCTGCCATTGACGGTCGAAGAGTA--CCAAGTAGCACAGCTGTACTGCGTGGCGGAAGT 333
                                                                                  

consensus_8418#0      TTTTTCCGGAAGGGCGTCTGATAAAACGG-AATCGAAGCTGGGGATATATAGGAGGAGGA 404
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      CGTCTACTGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTGGCGATGCA 415
consensus_8418#3      CCTC----GAGAACTGTTGGCCCACTGG--ACTCACAGAAACATACTGTTTGGCGATGCA 63
consensus_8418#2      GTCC-----AAAAACGAAACCGGTGGCGGCGAAGGTATTGAGGTGCTGAAAAATGAACCC 388
                                                                                  

consensus_8418#0      GGAGGAGGAGGAGTGTGTTTATTATTATTTTTTTCAGTTTTTGCTCGGTTTTTGTCGTAA 464
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      AGCTGCAAAGAAAACTACTA--CACAAACAAACATACCTTG-ACATAGCAAACAA-GCAA 471
consensus_8418#3      AGCTGCAAAGAAAACTACTA--CACAAACAAACATACCTTGTACATAGCAAAAAA-GCAA 120
consensus_8418#2      --TTTGACAACTATCCACTGCTCGGTGGAAAGTACAATTCCGGC-CAGTATACGT-ACAA 444
                                                                                  

consensus_8418#0      GCTTTGTTTTGATTTATCATTTTTGTTTCGTTTTTCTTCATCTCTGTTTTACCGGCAAAG 524
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      TATTAGTTGTGGGCTGCTACACTTACT--GCCCTTCCCGATGTCTTACGGGGCGACAACT 529
consensus_8418#3      TATTAGTTTTGGGCTGCTAAACTTACT--GCCCTTCCCCATTTCTTACGGGGCCACAACT 178
consensus_8418#2      AATCTATCATTTGGCCTCGAAGGTACCGGCCTTCATCCGGCTGCTCGC---------ACC 495
                                                                                  

consensus_8418#0      CAAACGCATGTTTGGTGGAAAAGAGACAGAGTGAAAAGAAGATAGAAAAGTGTAAGAAGA 584
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      TGAGCTAGTGATAAATAATTAGAGCAGACTAACACGCGCATTGCAATTGCAAAACAAACA 589
consensus_8418#3      TGAGCTAGTGATAAATAAGTAGAGCAGACTTACACGCGCATTGCAATTGCAAAACAAACA 238
consensus_8418#2      CAAGGGATCGCTAGA-----AGTGCACGAGGAAGCCTGGAATGCATATCCCGTACTGCCG 550
                                                                                  

consensus_8418#0      AGTGGCAGGGTTAAACGGGAAGTATAATTATGGTGGTGTTATAAATGCAACTAGGCAACA 644
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      AACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTA 649
consensus_8418#3      AACAACCGCTATATACATATATCTACTAACTACTGGGCACATAACGGCTGCTAACCCTTA 298
consensus_8418#2      GACAGTCATAACCAATCCCAATTGGATGAAGGAGAAGATGACCATCACGATCGACACGTA 610
                                                                                  

consensus_8418#0      CGGGACAAAAACATAAACTATCAGTAGGATCGAAAGCATGAATTAGTACAGAGAGTGTGT 704
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      CAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCC-ATTTGCAAAAGCACACTAGT 708
consensus_8418#3      CAATGGCGCTATCCCCAATAATAGCAAAGCCTATTTTCC-ATTTGCAAAAGCACACTAGT 357
consensus_8418#2      CAGTATCGATGGTGACGACGATCTCGAGAAC-GCCCCATGAGTTGACGCCGGAAA----- 664
                                                                                  

consensus_8418#0      GTGTGCGCGCGTGTTGTCGGTGAGTGAGCAGGTTCACCGTGTGAGTGCAGCAGGATCGCC 764
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      ACACGCGAGCGAACGAGAAATGCCATGGAAGAAT-ATAGAGAATGCATAAAGGGAAAGGA 767
consensus_8418#3      ACACGCGAGCGAACGAGAAATGCCATGGAAGAAT-ATAGAGAATGCATAAAGGGAAAGGA 416
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      AGACAAGAGTCAGATAAAAATAGTGCAAAACACACATTGCAATAGCGTAAGCAAAACCAG 824
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      AGACAGGAAGCAA-CATACAGACAAACGTACATTGGAAGTGGATAAGAAAGTGACAAAAA 826
consensus_8418#3      AGACAGGAAGCAAACATACAGACAAACGTACATTGGAAGCGGAAGAGAAAGTGACAAAAA 476
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      TAGAC-AATTACTGAACTCACACGCATGTGCACAGCAGCACCCAAGC-TCGAGTAGAGGA 882
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      AAA---TGCTAGAGAAAAGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACA 883
consensus_8418#3      AAAAAATGCTAGAGAAAAGAAGAAAGGGAATAGGAAAAAAGCGAAGAGTTCAATAAAACA 536
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      TGGCCGCAGGACGTAACATTCGCAAACGTTAAACCATTTACCCCCTCCCATAACTGAAAA 942
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      CCACTTGAAAAATAAAAAAAAAAAAAAACAAAAAAAGGCCACATGTGCTCGAGCTG---- 939
consensus_8418#3      CCACTAAAA--------------------------------------------------- 545
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      AAACACACATAGAATGGGTGAATTCCGAATAAATTGCAATAGTGTGAATAGAGCAAGAGA 1002
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      ------------------------------------------------------------
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      TAATATTGCGCACCCATCGCTGGTGTGCGTTCAGAGAAGAGGTCAGATCTAAAAATGTGA 1062
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      ------------------------------------------------------------
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      TGTGCGCATGTGGATCTGTGTGTGAAAACATTTAAGAAACACAACAACTAATCTTCAACC 1122
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      ------------------------------------------------------------
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      ATTGTGTGTAGCATCGTCGTGCAACCACAGTGCGGCGATTGGCGGACGGAAATCGTCTAC 1182
consensus_8418#4      ------------------------------------------------------------
consensus_8418#1      ------------------------------------------------------------
consensus_8418#3      ------------------------------------------------------------
consensus_8418#2      ------------------------------------------------------------
                                                                                  

consensus_8418#0      TGAAAGTAGATATCCGATAAACTACTCACAGCTACATACTGTTTG 1227
consensus_8418#4      ---------------------------------------------
consensus_8418#1      ---------------------------------------------
consensus_8418#3      ---------------------------------------------
consensus_8418#2      ---------------------------------------------
                                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)