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Anopheles gambiae
cluster # 8428 cluster # 8428       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8428#0 length = 1054 sequences # 5  
consensus_8428#1 length = 627 sequences # 2  
consensus_8428#2 length = 601 sequences # 1  
consensus_8428#3 length = 584 sequences # 1  
consensus_8428#4 length = 219 sequences # 1  

consensusID : consensus_8428#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1054
fasta sequence
                              [CCGATTTGTTTATTCTCGAAAAGACGCTAGCAAGCAGTGAACGCTGGTCTGTTGTTGCA-GTATTTTTATACCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAGCGGAACAGAGACTCATCCAGATGGAACTTGAAATGCAGGGCAAAGAGGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGCCGACGCAGGCGAGCCCCCGTTCGAGTTCGAGCCAGTTGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCACAGACAGCACGTACCAGAGCAATCTCACAAACTGGCTGAACAAGAAGATACTGGGCGAGGAACCGAACGGTCGGCTGGTGGAAGCG-ATGGATCTGGTGTTCA-GGCGCGAGTTTCTCCCACTGTGCAGCTGGAAGGGGCGAGGCAAACCGGGGGAAACGAAAATACCCATGAGCGCCCAAACGCACATCATGAAGCTGTTTACTGCGCTGGGAAGCAATCGCTTCATTGCCATTACGGATGCGTTTGTGGCGAAGTTCTTTTTGAAAAAGCTACCCCATGCGAAGGATCGGTTGCACGTGAAGCGAAAGAATGTGACGCTCGCTAACCGACCGAACAGCCGTCCTGACTCCACACAGGTTCAAGAGTACGAGGTACTGTAAGCGTGCAGTGACACACGATAGAGGGTAGGTAAAGTATCGGAACATTTCATTTAAAATGCAACATTGAATTCAACGTTTTTTCTAAGGGAGTTCAGCAATTTAAGTTC]

[+] EMBL BM605076             [CCGATTTGTTTATTCTCGAAAAGACGCTAGCAAGCAGTGAACGCTGGTCTGTTGTTGCA GTATTTTTATACCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAGCGGAACAGAGACTCATCCAGATGGAACTTGAAATGCAGGGCAAAGAGGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGCCGACGCAGGCGAGCCCCCGTTCGAGTTCGAGCCAGTTGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCACAGACAGCACGTACCAGAGCAATCTCACAAACTGGCTGAACAAGAAGATACTGGGCGAGGAAACGAACGGTCGG                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM615743             [                        tccgAGCAAGCAGTGAACGCTGGTCTGTTGTTGCATGTATTTTTATACCAACAATCTATCATGGCCTCTCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAGCGGAACAGAGACTCATCCAGATGGAACTTGAAATGCAGGGCAAAGAGGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08KJQ             [                                            tcGTCTGTTGTTGCA GTATTTTTATACCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAGCGGAACAGAGACTCATCCAGATGGAACTTGAAATGCAGGGCAAAGAGGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGCCGACGCAGGCGAGCCCCCGTTCGAGTTCGAGCCAGTTGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCACAGACAGCACGTACCAGAGCAATCTCACAAACTGGCTGAACAAGAAGATACTGGGCGAGGAACCGAACGGTCGGCTGGTGGAAGCGCATGGATCTGGTGTTCACGGCGCGAGTCTCTCCCACTGTG                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX622401             [                                                                                                                                                                AATTCGAGCAAGAGTACGAAGCGGAACAGAGGCTCATCCAGATGGAACTTGAAATGCAGGGCAAAGAGGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCGTGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGCAGATGCAGGCGAGCCCCCGTTCGAGTTCGAGCCGGTGGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCACGGACAGCACGTACCAGAGCAATCTCACAAACTGGCTGAACAAGAAGATACTGGGCGAGGAACCGAACGGTCGGCTGGTGGAAGCG ATGGATCTGGTATTCA GGCGCGAGTTTCTCCCACTGTGCAGCTGGAAGGGGCG                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08KJR             [                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGGCCACACCCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGCCGACGCAGGCGAGCCCCCGTTCGAGTTCGAGCCAGTTGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCACAGACAGCACGTACCAGAGCATTCTCACAAACTGGCTGAACAAGAAGATACTGGGCGAGGAACCGAACGGTCGGCTGGTGGAAGCG ATGGTTCTGGTGTTCA GGCGCGAGTTTCTCCCACTGTGCAGCTGGAAGGGGCGAGGCAAACCGGGGGAAACGAAAATACCCATGAGCGCCCAAACGCACATCATGAAGCTGTTTACTGCGCTGGGAAGCAATCGCTTCATTGCCATTACGGATGCGTTTGTGGCGAAGTTCTTTTTGAAAAAGCTACCCCATGCGAAGGATCGGTTGCACGTGAAGCGAAAGAATGTGACGCTCGCTAACCGACCGAACAGCCGTCCTGACTCCACACAGGTTCAAGAGTACGAGGTACTGTAAGCGTGCAGTGACACACGATAGAGGGTAGGTAAAGTATCGGAACATTTCATTTAAAATGCAACATTGAATTCAACGTTTTTTCTAAGGGAGTTCAGCAATTTAAGTTC]


>consensus_8428#0 CCGATTTGTTTATTCTCGAAAAGACGCTAGCAAGCAGTGAACGCTGGTCTGTTGTTGCAG TATTTTTATACCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAA CGGGGAAAATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAG CGGAACAGAGACTCATCCAGATGGAACTTGAAATGCAGGGCAAAGAGGCAAACGAACTAA TGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACG TGCTGAAGATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACC ACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCG GCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGG CCGGTGCCGACGCAGGCGAGCCCCCGTTCGAGTTCGAGCCAGTTGCTAACGAGGAGCAGC TGAACGAGCTGGACTACAGGCTCGCCACAGACAGCACGTACCAGAGCAATCTCACAAACT GGCTGAACAAGAAGATACTGGGCGAGGAACCGAACGGTCGGCTGGTGGAAGCGATGGATC TGGTGTTCAGGCGCGAGTTTCTCCCACTGTGCAGCTGGAAGGGGCGAGGCAAACCGGGGG AAACGAAAATACCCATGAGCGCCCAAACGCACATCATGAAGCTGTTTACTGCGCTGGGAA GCAATCGCTTCATTGCCATTACGGATGCGTTTGTGGCGAAGTTCTTTTTGAAAAAGCTAC CCCATGCGAAGGATCGGTTGCACGTGAAGCGAAAGAATGTGACGCTCGCTAACCGACCGA ACAGCCGTCCTGACTCCACACAGGTTCAAGAGTACGAGGTACTGTAAGCGTGCAGTGACA CACGATAGAGGGTAGGTAAAGTATCGGAACATTTCATTTAAAATGCAACATTGAATTCAA CGTTTTTTCTAAGGGAGTTCAGCAATTTAAGTTC



consensusID : consensus_8428#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 627
fasta sequence
                              [CCCCGAGGTTAAAAGACGCTAGCAGCAGTGAACGCTAGTCTGTTGTTGCAGTATTTTTATGCCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACNAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAATGAGTACGAAGCTGGAACAGAGACTCATCCAGATGGAACGTAGGTGAAAGCGAATCACACATAAAGTTGACTAATCGTGCATTGACTANCGCTGGGCTTGTATCCCTNTTCAGCTTCGAAATTGCGATGGGGCNAAGAGGCAAAACGTAGACTAATTGATGACGCTGCGAACGATAGAAGATTCCCGGTTGCGAGGATTAACCCGAGTCGNACGGCCCACGATCCGCGGGGGAACGTGGCCTTGAATCATTAGCGTCCTCNCNTCTCCAATTGGTTCCAANGGCTTCAACGTAATTCCGTGGGTGCCAAGGCTTGGCGACCTCGGCGAGACGGAATTGNGGACCCCAAGCAATTCCCCAATGAAAAGCGNAAGCGGTTGGGCGAAGGGAGAACCGGTTGCTCGGAATTCCCCAGNGGNTTGGCCTTAGTGCGCGTTGGTGAACGAAAAAGAGAGGTGTTCCGGGAA]

[+] EMBL AL932164             [CCCCGAGGTTAAAAGACGCTAGCAGCAGTGAACGCTAGTCTGTTGTTGCAGTATTTTTATGCCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACNAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAATGAGTACGAAGCTGGAACAGAGACTCATCCAGATGGAACGTAGGTGAAAGCGAATCACACATAAAGTTGACTAATCGTGCATTGACTANCGCTGGGCTTGTATCCCTNTTCAGCTTCGAAATTGCGATGGGGCNAAGAGGCAAAACGTAGACTAATTGATGACGCTGCGAACGATAGAAGATTCCCGGTTGCGAGGATTAACCCGAGTCGNACGGCCCACGATCCGCGGGGGAACGTGGCCTTGAATCATTAGCGTCCTCNCNTCTCCAATTGGTTCCAANGGCTTCAACGTAATTCCGTGGGTGCCAAGGCTTGGCGACCTCGGCGAGACGGAATTGNGGACCCCAAGCAATTCCCCAATGAAAAGCGNAAGCGGTTGGGCGAAGGGAGAACCGGTTGCTCGGAATTCCCCAGNGGNTTGGCCTTAGTGCGCGTTGGTGAACGAAAAAGAGAGGTGTTCCGGGAA]
[+] EMBL AL931714             [                               ACGCTAGTCTGTTGTTGCNGTATTTTTATGCCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_8428#1 CCCCGAGGTTAAAAGACGCTAGCAGCAGTGAACGCTAGTCTGTTGTTGCAGTATTTTTAT GCCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAA TCTACNAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAATGAGTACGAAGCTGGAACA GAGACTCATCCAGATGGAACGTAGGTGAAAGCGAATCACACATAAAGTTGACTAATCGTG CATTGACTANCGCTGGGCTTGTATCCCTNTTCAGCTTCGAAATTGCGATGGGGCNAAGAG GCAAAACGTAGACTAATTGATGACGCTGCGAACGATAGAAGATTCCCGGTTGCGAGGATT AACCCGAGTCGNACGGCCCACGATCCGCGGGGGAACGTGGCCTTGAATCATTAGCGTCCT CNCNTCTCCAATTGGTTCCAANGGCTTCAACGTAATTCCGTGGGTGCCAAGGCTTGGCGA CCTCGGCGAGACGGAATTGNGGACCCCAAGCAATTCCCCAATGAAAAGCGNAAGCGGTTG GGCGAAGGGAGAACCGGTTGCTCGGAATTCCCCAGNGGNTTGGCCTTAGTGCGCGTTGGT GAACGAAAAAGAGAGGTGTTCCGGGAA



consensusID : consensus_8428#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 601
fasta sequence
                              [CAGAATCGGCACGATGGCGCTAGCAGCAGTGAACGCTGGTCTGTTGTTGCAGTATTTTTATACCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAGCGGAACAGAGGCTCATCCAGATGGAACTTGAAATGCAGGGGCAAAGAGGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGCAGATGCAGGCGAGCCCCCGTTCGAGTTCGAGCCGGTGGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCACGGACAGCACGTACCAGAGCAATTCTCAACAAACTGGGCTG]

[+] EMBL BX469830             [CAGAATCGGCACGATGGCGCTAGCAGCAGTGAACGCTGGTCTGTTGTTGCAGTATTTTTATACCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAAATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAGCGGAACAGAGGCTCATCCAGATGGAACTTGAAATGCAGGGGCAAAGAGGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGCAGATGCAGGCGAGCCCCCGTTCGAGTTCGAGCCGGTGGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCACGGACAGCACGTACCAGAGCAATTCTCAACAAACTGGGCTG]


>consensus_8428#2 CAGAATCGGCACGATGGCGCTAGCAGCAGTGAACGCTGGTCTGTTGTTGCAGTATTTTTA TACCAACAATCTATCATGGCCTCGCAAAACATGGCTACGGCGCGTGACAAAACGGGGAAA ATCTACAAAATTCGTGAGCTGCTGGAAAGCAAATTCGAGCAAGAGTACGAAGCGGAACAG AGGCTCATCCAGATGGAACTTGAAATGCAGGGGCAAAGAGGCAAACGAACTAATGATGAC GTGCGACGATGAAGATCCGTTCGAGGATACCGGCGACGCCACGATCGGGGACGTGCTGAA GATACTCTCCTCCATGTCAGGTCAGATCGGGCAGCTGCACCGCAAGATGGACCACATCCA GAAGGAGGTGGAGGACGTTTCGATCCGCGTGCTGCGGGTGGAGAAAAAGCTCGGCACAAC GCTGGCCACACTCGAGCAGGTGAAGGATGCCGTTGCGCTGGGCGAAAATGCGGCCGGTGC AGATGCAGGCGAGCCCCCGTTCGAGTTCGAGCCGGTGGCTAACGAGGAGCAGCTGAACGA GCTGGACTACAGGCTCGCCACGGACAGCACGTACCAGAGCAATTCTCAACAAACTGGGCT G



consensusID : consensus_8428#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 584
fasta sequence
                              [AGATTTCATTCAACAAATTGTGTGATAAAATATCATAAAAAGATTACACTCTGCTCAACATAGAAAGGCAAAAACGGCAAATCATGGCAACGCAACGTGACAAAAAAACGGGCAACATTTACAAAATTCGAGACAAGCGACAAGAGACAAGAGAGCAAATTTGACGAGGAGTTTGAAGCAGAACAAAATTATTTACGATTGAAGCGCGAACAGGAAGCAAAAACGAAACTCACCAGCGAACTATTGCTGACCTGCGAAGAGCAGGATCCGTTCGCTGACGTGGGCGAACCAACGATCGAGAACGTGTTCAGCTTGCTTACGACCGTGCTGCAACACATCGGACAGCTCAACCGAAAGGTGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATTCGTGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTAGCCACCCTCGAACAGCTGAAGGACGTGGTGAGCATTAGCGATCTGGCACAGAAGAGCTCCGATCCCGAACTGGCCGGATTCGAGTTTAACGCCGTAACCAACGAGGAGGAGCTGAACGAGCTGGACTTCAAGCTCGGAGCTGACGCAGA]

[+] EMBL BX628800             [AGATTTCATTCAACAAATTGTGTGATAAAATATCATAAAAAGATTACACTCTGCTCAACATAGAAAGGCAAAAACGGCAAATCATGGCAACGCAACGTGACAAAAAAACGGGCAACATTTACAAAATTCGAGACAAGCGACAAGAGACAAGAGAGCAAATTTGACGAGGAGTTTGAAGCAGAACAAAATTATTTACGATTGAAGCGCGAACAGGAAGCAAAAACGAAACTCACCAGCGAACTATTGCTGACCTGCGAAGAGCAGGATCCGTTCGCTGACGTGGGCGAACCAACGATCGAGAACGTGTTCAGCTTGCTTACGACCGTGCTGCAACACATCGGACAGCTCAACCGAAAGGTGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATTCGTGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTAGCCACCCTCGAACAGCTGAAGGACGTGGTGAGCATTAGCGATCTGGCACAGAAGAGCTCCGATCCCGAACTGGCCGGATTCGAGTTTAACGCCGTAACCAACGAGGAGGAGCTGAACGAGCTGGACTTCAAGCTCGGAGCTGACGCAGA]


>consensus_8428#3 AGATTTCATTCAACAAATTGTGTGATAAAATATCATAAAAAGATTACACTCTGCTCAACA TAGAAAGGCAAAAACGGCAAATCATGGCAACGCAACGTGACAAAAAAACGGGCAACATTT ACAAAATTCGAGACAAGCGACAAGAGACAAGAGAGCAAATTTGACGAGGAGTTTGAAGCA GAACAAAATTATTTACGATTGAAGCGCGAACAGGAAGCAAAAACGAAACTCACCAGCGAA CTATTGCTGACCTGCGAAGAGCAGGATCCGTTCGCTGACGTGGGCGAACCAACGATCGAG AACGTGTTCAGCTTGCTTACGACCGTGCTGCAACACATCGGACAGCTCAACCGAAAGGTG GACCACATCCAGAAGGAGGTGGAGGACGTTTCGATTCGTGTGCTGCGGGTGGAGAAAAAG CTCGGCACAACGCTAGCCACCCTCGAACAGCTGAAGGACGTGGTGAGCATTAGCGATCTG GCACAGAAGAGCTCCGATCCCGAACTGGCCGGATTCGAGTTTAACGCCGTAACCAACGAG GAGGAGCTGAACGAGCTGGACTTCAAGCTCGGAGCTGACGCAGA



consensusID : consensus_8428#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 219
fasta sequence
                              [AATATCATAAAAAGATTACACTCTGCTCAACATAGAAAGGCAATAACGGCAAATCATGGCAACGCAACGTGACAAAAAAAACGGGCAACATTTACAAAATTCGAGACAAGCTAGAGAGCAAATTTGACGAGGAGTTTGAAGCAGAACAAAATTATTTACGATTGAAGCGCGAACAGGAAGCAAAAACGAAACTAACCAGCGAACTATTGCTGACCTGCG]

[+] EMBL CNS09LBU             [AATATCATAAAAAGATTACACTCTGCTCAACATAGAAAGGCAATAACGGCAAATCATGGCAACGCAACGTGACAAAAAAAACGGGCAACATTTACAAAATTCGAGACAAGCTAGAGAGCAAATTTGACGAGGAGTTTGAAGCAGAACAAAATTATTTACGATTGAAGCGCGAACAGGAAGCAAAAACGAAACTAACCAGCGAACTATTGCTGACCTGCG]


>consensus_8428#4 AATATCATAAAAAGATTACACTCTGCTCAACATAGAAAGGCAATAACGGCAAATCATGGC AACGCAACGTGACAAAAAAAACGGGCAACATTTACAAAATTCGAGACAAGCTAGAGAGCA AATTTGACGAGGAGTTTGAAGCAGAACAAAATTATTTACGATTGAAGCGCGAACAGGAAG CAAAAACGAAACTAACCAGCGAACTATTGCTGACCTGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8428#0      CCGATTTGTTTATTCTCGAAAAGACGCTAGCAAGCAGTGAACGCTGGTCTGTTGTTGCAG 60
consensus_8428#2      -------CAGAATCGGCACGATGGCGCTAGCA-GCAGTGAACGCTGGTCTGTTGTTGCAG 52
consensus_8428#3      -------------------AGATTTCATTCAACAAATTGTGTGATAAAATATCATAAAAA 41
consensus_8428#4      -----------------------------------------------AATATCATAAAAA 13
consensus_8428#1      --------CCCCGAGGTTAAAAGACGCTAGCA-GCAGTGAACGCTAGTCTGTTGTTGCAG 51
                                                                       * *  *   * 

consensus_8428#0      TATTTTTATACCAACAATCTATCATGGCC----TCGCAAAACATGGCTACGGCGCGTGAC 116
consensus_8428#2      TATTTTTATACCAACAATCTATCATGGCC----TCGCAAAACATGGCTACGGCGCGTGAC 108
consensus_8428#3      GATTACACTCTGCTCAACATAGAAAGGCAAAAACGGCAAATCATGGCAACGCAACGTGAC 101
consensus_8428#4      GATTACACTCTGCTCAACATAGAAAGGCAATAACGGCAAATCATGGCAACGCAACGTGAC 73
consensus_8428#1      TATTTTTATGCCAACAATCTATCATGGCC----TCGCAAAACATGGCTACGGCGCGTGAC 107
                       ***    *     ***  **  * ***       ***** ****** ***   ******

consensus_8428#0      AAAA----CGGGGAAAATCTACAAAATTCGTGAGCTGCTG----------GAAAGCAAAT 162
consensus_8428#2      AAAA----CGGGGAAAATCTACAAAATTCGTGAGCTGCTG----------GAAAGCAAAT 154
consensus_8428#3      AAAAAAA-CGGGCAACATTTACAAAATTCGAGACAAGCGACAAGAGACAAGAGAGCAAAT 160
consensus_8428#4      AAAAAAAACGGGCAACATTTACAAAATTCGAGACAAGCTA----------GAGAGCAAAT 123
consensus_8428#1      AAAA----CGGGGAAAATCTACNAAATTCGTGAGCTGCTG----------GAAAGCAAAT 153
                      ****    **** ** ** *** ******* **   **            ** *******

consensus_8428#0      TCGAGCAA-GAGTACGAAGC-GGAACAGAGACTCATCCAGATGGAACTTGAA----ATGC 216
consensus_8428#2      TCGAGCAA-GAGTACGAAGC-GGAACAGAGGCTCATCCAGATGGAACTTGAA----ATGC 208
consensus_8428#3      TTGACGAG-GAGTTTGAAGC-AGAACAAAATTATTTACGATTGAAGCGCGAACAGGAAGC 218
consensus_8428#4      TTGACGAG-GAGTTTGAAGC-AGAACAAAATTATTTACGATTGAAGCGCGAACAGGAAGC 181
consensus_8428#1      TCGAGCAATGAGTACGAAGCTGGAACAGAGACTCATCCAGATGGAACGT-------AGGT 206
                      * **  *  ****  *****  ***** *      * *   ** * *         * * 

consensus_8428#0      AGGG-CAAAGA-GGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGA 274
consensus_8428#2      AGGGGCAAAGA-GGCAAACGAACTAATGATGACGTGCGACGATGAAGATCCGTTCGAGGA 267
consensus_8428#3      AAAAACGAAACTCACCAGCGAACTATTGCTGACCTGCGAAGAGCAGGATCCGTTCGCTGA 278
consensus_8428#4      AAAAACGAAACTAACCAGCGAACTATTGCTGACCTGCG---------------------- 219
consensus_8428#1      GAAAGCGAATCACACATAAAGTTGACTAAT--CGTGCATTGACTANCGCTGGGCTTGTAT 264
                           * **     *         * *  *  * ***                       

consensus_8428#0      TACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGAT 334
consensus_8428#2      TACCGGCGACGCCACGATCGGGGACGTGCTGAAGATACTCTCCTCCATGTCAGGTCAGAT 327
consensus_8428#3      CGTGGGCGAACCAACGATCGAGAACGTGTTCAGCTTGCTTACGACCGTGCTGCAACACAT 338
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      CCCTNTTCAGCTTCGAAATTGCGATGGGGCNAAGAGGCA---AAACGTAGACTAATTGAT 321
                                                                                  

consensus_8428#0      CGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCG 394
consensus_8428#2      CGGGCAGCTGCACCGCAAGATGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATCCG 387
consensus_8428#3      CGGACAGCTCAACCGAAAGGTGGACCACATCCAGAAGGAGGTGGAGGACGTTTCGATTCG 398
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      GACGCTGC-GAACGATAGAAGATTCCCGGTTGCGAGGATTAACCCGAGTCGNACGGCCCA 380
                                                                                  

consensus_8428#0      CGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAG-- 452
consensus_8428#2      CGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTGGCCACACTCGAGCAGGTGAAG-- 445
consensus_8428#3      TGTGCTGCGGGTGGAGAAAAAGCTCGGCACAACGCTAGCCACCCTCGAACAGCTGAAG-- 456
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      CGATCCGCGGG-GGAACGTGGCCTTGAATCATTAGCGTCCTCNCNTCTCCAATTGGTTCC 439
                                                                                  

consensus_8428#0      GATGCCGTTGCGCTGGGCGAAAATGC---GGCCGGTGCCGACGCAGGCGAGCCCCCGTT- 508
consensus_8428#2      GATGCCGTTGCGCTGGGCGAAAATGC---GGCCGGTGCAGATGCAGGCGAGCCCCCGTT- 501
consensus_8428#3      GACGTGGTGAGCATTAGCGATCTGGCACAGAAGAGCTCCGATCCCGAACTGGCCGGATT- 515
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      AANGGCTTCAACGTAATTCCGTGGGTGCCAAGGCTTGGCGACCTCGGCGAGACGGAATTG 499
                                                                                  

consensus_8428#0      CGAGTTCGAGCCAGTTGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCAC 568
consensus_8428#2      CGAGTTCGAGCCGGTGGCTAACGAGGAGCAGCTGAACGAGCTGGACTACAGGCTCGCCAC 561
consensus_8428#3      CGAGTTTAACGCCGTAACCAACGAGGAGGAGCTGAACGAGCTGGACTTCAAGCTCGGAGC 575
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      NGGACCCCAAGCAATTCCC--CAATGAAAAGCGNAAGCGGTTGGGCGAAGGGAGAACCGG 557
                                                                                  

consensus_8428#0      AGACAGCACGTACCAGAGCAATCTC--ACAAACTGG-CTGAACAAGAAGATACTGGGCGA 625
consensus_8428#2      GGACAGCACGTACCAGAGCAATTCTCAACAAACTGGGCTG-------------------- 601
consensus_8428#3      TGACGCAGA--------------------------------------------------- 584
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      TTGCTCGGAATTCCCCAGNGGNTTGGCCTTAGTGCGCGTTGGTGAACGAAAAAGAGAGGT 617
                                                                                  

consensus_8428#0      GGAACCGAACGGTCGGCTGGTGGAAGCGATGGATCTGGTGTTCAGGCGCGAGTTTCTCCC 685
consensus_8428#2      ------------------------------------------------------------
consensus_8428#3      ------------------------------------------------------------
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      GTTCCGGGAA-------------------------------------------------- 627
                                                                                  

consensus_8428#0      ACTGTGCAGCTGGAAGGGGCGAGGCAAACCGGGGGAAACGAAAATACCCATGAGCGCCCA 745
consensus_8428#2      ------------------------------------------------------------
consensus_8428#3      ------------------------------------------------------------
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      ------------------------------------------------------------
                                                                                  

consensus_8428#0      AACGCACATCATGAAGCTGTTTACTGCGCTGGGAAGCAATCGCTTCATTGCCATTACGGA 805
consensus_8428#2      ------------------------------------------------------------
consensus_8428#3      ------------------------------------------------------------
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      ------------------------------------------------------------
                                                                                  

consensus_8428#0      TGCGTTTGTGGCGAAGTTCTTTTTGAAAAAGCTACCCCATGCGAAGGATCGGTTGCACGT 865
consensus_8428#2      ------------------------------------------------------------
consensus_8428#3      ------------------------------------------------------------
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      ------------------------------------------------------------
                                                                                  

consensus_8428#0      GAAGCGAAAGAATGTGACGCTCGCTAACCGACCGAACAGCCGTCCTGACTCCACACAGGT 925
consensus_8428#2      ------------------------------------------------------------
consensus_8428#3      ------------------------------------------------------------
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      ------------------------------------------------------------
                                                                                  

consensus_8428#0      TCAAGAGTACGAGGTACTGTAAGCGTGCAGTGACACACGATAGAGGGTAGGTAAAGTATC 985
consensus_8428#2      ------------------------------------------------------------
consensus_8428#3      ------------------------------------------------------------
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      ------------------------------------------------------------
                                                                                  

consensus_8428#0      GGAACATTTCATTTAAAATGCAACATTGAATTCAACGTTTTTTCTAAGGGAGTTCAGCAA 1045
consensus_8428#2      ------------------------------------------------------------
consensus_8428#3      ------------------------------------------------------------
consensus_8428#4      ------------------------------------------------------------
consensus_8428#1      ------------------------------------------------------------
                                                                                  

consensus_8428#0      TTTAAGTTC 1054
consensus_8428#2      ---------
consensus_8428#3      ---------
consensus_8428#4      ---------
consensus_8428#1      ---------
                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)