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Anopheles gambiae
cluster # 8489 cluster # 8489       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8489#0 length = 1028 sequences # 5  
consensus_8489#1 length = 680 sequences # 2  
consensus_8489#2 length = 663 sequences # 2  
consensus_8489#3 length = 469 sequences # 1  

consensusID : consensus_8489#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1028
fasta sequence
                              [CCATGTGGCTGCCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATACAAACAAACAACCTTGCTGCACGCAAAGACGAGCAACAAATCACGGTGAAAAACTAATCCTTTCTTGA-TTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACCAGACCCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCGATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTTGACGAGTTCGGCCTGCCAAAGATTCCTGCCTCCGTCAAAACGACCTAAGCGGCTTTGGCGCAGCAT-CCCGCCTGTGCGATGATTCAGCTATTTGAGTGGCCTTCTTCAATTAAACACTCCCTCGTGTATTCGGCATCATCTGCATGGCGTTTGCCTTTAACTTATGTTTAAATACAGCACCCGTAATCAGCCTACGGCATACGAGAAAGCAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGGCCC]

[-] EMBL CNS090H5             [CCATGTGGCTGCCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATACAAACAAACAACCTTGCTGCACGCAAAGACGAGCAACAAATCACGGTGAAAAACTAATCCTTTCTTGATTTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGA CTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAATACGAAAGCCAGGTAGAGAA CTGCGGAACCAGTCGTTCAACATGGAGCAGGCAAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAACCGATCAAAATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGTTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTTGACGAGTTCGGCCTGCCAAAGATTCCTGCCTCCGTCAAAACGACCTAAGCGGCTTTGGCGCAGCAT CCCGCCTGTGCGATGATTCAGCTATTTGAGTGGCCTTCTTCAATTAAACACTCCCTCGTGTATTCGGCATCATCTGCATGGCGTTTGCCTTTAACTTATGTTTAAATACAGCACCCGT                                                                      ]
[+] EMBL BM586425             [                                   ccggtagaAATACAAACAAACAACCTTGCTGCACGCAAAGACGAGCAACAAATCACGGTGAAAAACTAATCCTTTCTTGA TTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACCAGACCCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCGATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACG AATTGCCCT                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS090H4             [                                                               CTGCACGCAAAGACGAGCAACAAATCACGGTGAAAAACTAATCCTTTCTTGA TTAATTCGCTCTG GTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCAAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAATTTTTCACCAGCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGTTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTTGACGAGTTCGGCCTGCCAAAGATTCCTGCCTCCGTCAAAACGACCTAAGCGGCTTTGGCGCA CATCCCCGCCTGTGCGATGATTCAGCTATTTGAGTGGCCTTCTTCAATTAAACACTCCCTCGTGTATTCGGCATCATCTGCATGGCGTTTGCCTTTAACTTATGTTTAAATACAGCACCCGTAATCAGCCTACGGCATACGAGAAAGCAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGGCCC]
[+] EMBL BM627966             [                                                                             ccGCAACAAATCACGGTGAAAAACTAATCCTTTCTTGA TTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACCAGACCCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCGATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTGGACGA                                                                                                                                                                                                                                                          ]
[+] EMBL BM578796             [                                                                                                                                                                                                                                                                                                                                                                                                                                   CCGACTTTGCGCACCAGACCCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCGATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTGGACGAGTTCGGCCTGCCAAAGATTCCTGCCTCCGTCAAAACGACCTAAGCGGCTTTGGCGCAGCAT CCTGCCTGTGCGATGATTCAACTATTTGAGTGGCCTTCTTCAATTAAACACTCCCTCGTGTATTCGGCATCATCTGCATGGCGTTTGCCTTTAACTTAT                                                                                         ]


>consensus_8489#0 CCATGTGGCTGCCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATACAAACAAACAACC TTGCTGCACGCAAAGACGAGCAACAAATCACGGTGAAAAACTAATCCTTTCTTGATTAAT TCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAA CCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAG GGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATG CGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGC AAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCC AACTTTGCGCACCAGACCCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGC ATGAAGTCGATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAG GACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACG TACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGAC GAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCA CCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTTGACGAG TTCGGCCTGCCAAAGATTCCTGCCTCCGTCAAAACGACCTAAGCGGCTTTGGCGCAGCAT CCCGCCTGTGCGATGATTCAGCTATTTGAGTGGCCTTCTTCAATTAAACACTCCCTCGTG TATTCGGCATCATCTGCATGGCGTTTGCCTTTAACTTATGTTTAAATACAGCACCCGTAA TCAGCCTACGGCATACGAGAAAGCAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTG CAGGGCCC



consensusID : consensus_8489#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 680
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTG]

[+] EMBL BM642533             [CCGCCCACGCGTCCGCCCACGCGTCCGCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTG]
[+] EMBL AL697513             [                                                                   agAATCG GCCCCAGGGNTCAGGGCC  AGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACGAAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACC                     ]


>consensus_8489#1 CCGCCCACGCGTCCGCCCACGCGTCCGCGCTCTGCGTACGTAGTGTAAAGATGAACCGTT TGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGG TCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCA AATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGA AGGCGATGCGGGTGCTGAAGCAGCGCAAACAGTACGAAAGCCAGGTAGAGAACCTGCGGA ACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACCAGACGCTGAAGGACACGCAGG CAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCA ACATCGAGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGGCGGACG AAGTGCAGGAAGCGATGGGCCGAACGTACGGCATGCCCGAGCTGGACGATGATGAGCTGC AGGCCGAGCTGGATGCGCTCGGCGACGAAATTGCCCTCGACGACGATGCCAGCTACCTGG ACGATGTGGTGAAAGCGCCGGAAGCACCGGACAAGGAACCGGGTGCGGATAGCGTCACCA ACAAGGACGGCATACTGGTG



consensusID : consensus_8489#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 663
fasta sequence
                              [GCAGATCGCCAGAGGTTATGACTGCACGCAAAGACGAGCAACAATCACGGTGAATNTAACTAATCCTTTCTTGATTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAG-GGGCC-GGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGACGCAGGCAAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCG--AGGAGATCGAGGACATACAGGACGACA-TGGCGGACATGCTGGAGCAGNGCGGACGAAAGTGGCAGGGACANGCGATGGGGCCCCGAANCGCTAACGNCCACTTGCCCCGAAACCCTGGCCACCGCACTNAATGACGGCACTGCCACGCCCCGANACTGGATGGCGCACTCCGGCNGACGAAAT]

[+] EMBL AL696699             [GCAGATCGCCAGAGGTTATGACTGCACGCAAAGACGAGCAACAATCACGGTGAATNTAACTAATCCTTTCTTGATTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAG GGGCC GGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGACGCAGGCAAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCG  AGGAGATCGAGGACATACAGGACGACA TGGCGGAC                                                                                                                                                    ]
[+] EMBL AL696098             [                                                          ccgaggttaTTCTTGATT ATTCGCTCTGCGTACGTAGTGTAAATATGAACCGTTTGTTCGGTAAATCGAAAGCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGTGGGCCTGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGA GCAGGCAAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCGNCNCGNGATCGAGGACATACAGGACGACACTGGCGGACATGCTGGAGCAGNGCGGACGAAAGTGGCAGGGACANGCGATGGGGCCCCGAANCGCTAACGNCCACTTGCCCCGAAACCCTGGCCACCGCACTNAATGACGGCACTGCCACGCCCCGANACTGGATGGCGCACTCCGGCNGACGAAAT]


>consensus_8489#2 GCAGATCGCCAGAGGTTATGACTGCACGCAAAGACGAGCAACAATCACGGTGAATNTAAC TAATCCTTTCTTGATTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGG TAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGC ACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAA GGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGAT GCGGGTGCTGAAGCAGCGCAAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTC GTTCAACATGGACGCAGGCAAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGG TGAGCGCCATGAAGGACGGCATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCG AGGAGATCGAGGACATACAGGACGACATGGCGGACATGCTGGAGCAGNGCGGACGAAAGT GGCAGGGACANGCGATGGGGCCCCGAANCGCTAACGNCCACTTGCCCCGAAACCCTGGCC ACCGCACTNAATGACGGCACTGCCACGCCCCGANACTGGATGGCGCACTCCGGCNGACGA AAT



consensusID : consensus_8489#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 469
fasta sequence
                              [CCGAGGTTAATTATGATCAACCTGCCGTTTCTTCAAAAATCGTAGAAATACAAACAAACTACCTTGCAAAGACGAGCAACAAATCACGGTGAAAAATTAATCCTTTCTTGATTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCTGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGG]

[+] EMBL AL692263             [CCGAGGTTAATTATGATCAACCTGCCGTTTCTTCAAAAATCGTAGAAATACAAACAAACTACCTTGCAAAGACGAGCAACAAATCACGGTGAAAAATTAATCCTTTCTTGATTAATTCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGGGCCCAAGCATCAGTGATTGTATCAGCTGGGTCGATGCACGGGCGGAAGCAATCGAGGGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTTTGCGCACAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGG]


>consensus_8489#3 CCGAGGTTAATTATGATCAACCTGCCGTTTCTTCAAAAATCGTAGAAATACAAACAAACT ACCTTGCAAAGACGAGCAACAAATCACGGTGAAAAATTAATCCTTTCTTGATTAATTCGC TCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAACCGG GCCCAAGCATCAGTGATTGTATCAGCTGGGTCGATGCACGGGCGGAAGCAATCGAGGGAA AGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATGCGCG AGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGCAACA GTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGAGCAGGCCAACTT TGCGCACAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8489#2      ------------------------------------GCAGATCGCCAGAGGTTATG---A 21
consensus_8489#3      --CCGAGGTTAATTATGATCAACCTGCCGTTTCTTCAAAAATCGTAGAAATACAAACAAA 58
consensus_8489#0      CCATGTGGCTGCCGGAATTCCTCGAGCACTGTTGGCCTACTGGAATACAAACAAACAACC 60
consensus_8489#1      ------------------------------------------------------------
                                                                                  

consensus_8489#2      CTGCAC-GCAAAGACGAGCAACAA-TCACGGTGAATNTAACTAATCCTTTCTTGATTAAT 79
consensus_8489#3      CTACCTTGCAAAGACGAGCAACAAATCACGGTGAAAA--ATTAATCCTTTCTTGATTAAT 116
consensus_8489#0      TTGCTGCACGCAAAGACGAGCAACAAATCACGGTGAAAAACTAATCCTTTCTTGATTAAT 120
consensus_8489#1      ---------------------------------CCGCCCACGCGTCCGCCCACGCGTC-C 26
                                                             *    ***   *  *  *   

consensus_8489#2      TCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAA 139
consensus_8489#3      TCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAA 176
consensus_8489#0      TCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAA 180
consensus_8489#1      GCGCTCTGCGTACGTAGTGTAAAGATGAACCGTTTGTTCGGTAAATCGAAACCCAAAGAA 86
                       ***********************************************************

consensus_8489#2      CCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAG 199
consensus_8489#3      CCGGGCCCAAGCATCAGTGATTGTATCAGCTGGGTCGATGCACGGGCGGAAGCAATCGAG 236
consensus_8489#0      CCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAG 240
consensus_8489#1      CCGGGCCCAAGCATCAGTGATTGTATCAGCGGGGTCGATGCACGGGCGGAAGCAATCGAG 146
                      ****************************** *****************************

consensus_8489#2      GGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATG 259
consensus_8489#3      GGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATG 296
consensus_8489#0      GGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATG 300
consensus_8489#1      GGAAAGATCAAAACGTTGGACAATGAGCTGCGCAAATACAAGGACCAGATGGCCAAGATG 206
                      ************************************************************

consensus_8489#2      CGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGC 319
consensus_8489#3      CGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGC 356
consensus_8489#0      CGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGC 360
consensus_8489#1      CGCGAGGGGCCGGCCAAGAACGCCGTCAAGCAGAAGGCGATGCGGGTGCTGAAGCAGCGC 266
                      ************************************************************

consensus_8489#2      AAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGACGCAGGC 379
consensus_8489#3      AA-CAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGA-GCAGGC 414
consensus_8489#0      AAACAATACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGA-GCAGGC 419
consensus_8489#1      AAACAGTACGAAAGCCAGGTAGAGAACCTGCGGAACCAGTCGTTCAACATGGA-GCAGGC 325
                      ** ** *********************************************** ******

consensus_8489#2      AAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGG 439
consensus_8489#3      CAACTTTGCGCAC-AGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGG---- 469
consensus_8489#0      CAACTTTGCGCACCAGACCCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGG 479
consensus_8489#1      CAACTTTGCGCACCAGACGCTGAAGGACACGCAGGCAACGGTGAGCGCCATGAAGGACGG 385
                       ************ **** *************************************    

consensus_8489#2      CATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACA 499
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      CATGAAGTCGATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACA 539
consensus_8489#1      CATGAAGTCAATGAAGAAAGAGTTCAAAAAGATCAACATCGAGGAGATCGAGGACATACA 445
                                                                                  

consensus_8489#2      GGACGACATGGCGGACATGCTGGAGCAGNGCGGACGAAAGTGGCAGGGACANGCGATGGG 559
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      GGACGACATGGCGGACATGCTGGAGCAGG-CGGACGAAGTGCAGGAAGCGATGGGCCGAA 598
consensus_8489#1      GGACGACATGGCGGACATGCTGGAGCAGG-CGGACGAAGTGCAGGAAGCGATGGGCCGAA 504
                                                                                  

consensus_8489#2      GCCCCGAANCGCTAACGNCCACTTGCCCCGAAACCCTGGCCAC------CGCACTNAATG 613
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      CGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCG 658
consensus_8489#1      CGTACGGCATGCCCGAGCTGGACGATGATGAGCTGCAGGCCGAGCTGGATGCGCTCGGCG 564
                                                                                  

consensus_8489#2      ACGGCACTGCCAC--GCCCCGANACTGGATGGCGCACTCCGGCNGACGAAAT-------- 663
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      ACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAG 718
consensus_8489#1      ACGAAATTGCCCTCGACGACGATGCCAGCTACCTGGACGATGTGGTGAAAGCGCCGGAAG 624
                                                                                  

consensus_8489#2      ------------------------------------------------------------
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      CACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTTGACG 778
consensus_8489#1      CACCGGACAAGGAACCGGGTGCGGATAGCGTCACCAACAAGGACGGCATACTGGTG---- 680
                                                                                  

consensus_8489#2      ------------------------------------------------------------
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      AGTTCGGCCTGCCAAAGATTCCTGCCTCCGTCAAAACGACCTAAGCGGCTTTGGCGCAGC 838
consensus_8489#1      ------------------------------------------------------------
                                                                                  

consensus_8489#2      ------------------------------------------------------------
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      ATCCCGCCTGTGCGATGATTCAGCTATTTGAGTGGCCTTCTTCAATTAAACACTCCCTCG 898
consensus_8489#1      ------------------------------------------------------------
                                                                                  

consensus_8489#2      ------------------------------------------------------------
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      TGTATTCGGCATCATCTGCATGGCGTTTGCCTTTAACTTATGTTTAAATACAGCACCCGT 958
consensus_8489#1      ------------------------------------------------------------
                                                                                  

consensus_8489#2      ------------------------------------------------------------
consensus_8489#3      ------------------------------------------------------------
consensus_8489#0      AATCAGCCTACGGCATACGAGAAAGCAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC 1018
consensus_8489#1      ------------------------------------------------------------
                                                                                  

consensus_8489#2      ----------
consensus_8489#3      ----------
consensus_8489#0      TGCAGGGCCC 1028
consensus_8489#1      ----------
                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)