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Anopheles gambiae
cluster # 8505 cluster # 8505       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8505#0 length = 987 sequences # 2  
consensus_8505#1 length = 871 sequences # 6  
consensus_8505#2 length = 621 sequences # 1  
consensus_8505#3 length = 259 sequences # 1  

consensusID : consensus_8505#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 987
fasta sequence
                              [CCGTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAATCTGTGTGTGTGTGTGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATAAAAAAAAAATCACAAACCCCCTCCCCCACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGGTAAGTCGGCAGAGGGTCGACAGTAACCTTCGTGAGTGTAAAATGTGTCTGGGTTGGTGGCGTTGCGCATTAGACAATGTGTCTGCCAATGTCTACAACGTAGTTTCGGAAACCAGGTTTTTGTGGTGTTGAATGATGGTTAGCTTGTAGTTTGCCTTTGGTTAATAATTGTTAGCCAGTGTACGAGATAAACGATAGCAGTGAAACAGTGATCGATGGTGTTTTCAACGTACTGCTGAAGCTAAAACAATCGAATTGGCAGATTGATTAGCTATTATTGGCCTTCTACGCATAATTCAAATAGCCGAGAATCGTTAGGAAACAGCAGGCCAGATGATACCTCATCAATCCGACACCCCTAAGGAGAGTTTTGCACTGATAACCACACACATCCGGCTTTCTATAGCAAGCAGCAGTGTACACTTTCATTGCTTACATACTGCTGTCGATTTGCCTGCCAGTGAAGCCCCCGTTTGTGATCCACCCTTCGCTGAACTGATAATTAACATGTCTGTAATGAACAAAGCTAACATTGGGATACCTTATTCATGCCAGAACCGACGTTACGAAATGGAAAACTGAGAAGGATTGTACCGGGAGAGGAGCTGTATGACGTTACAGCACACCTTATATTGACAAACTGAAGATCGCAGTTTCAGCGAATAGTTTCGCTGTAGCTCTATCTATTGATTCGATCATTTGCCTATTTGCGGATAGT]

[+] EMBL BM611139             [CCGTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAATCTGTGTGTGTGTGTGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATAAAAAAAAAATCACAAACCCCCTCCCCCACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGGTAAGTCGGCAGAGGGTCGACAGTAACCTTCGTGAGTGTAAAATGTGTCTGGGTTGGTGGCGTTGCGCATTAGACAATGTGTCTGCCAATGTCTACAACGTAGTTTCGGAAACCAGGTTTTTGTGGTGTTGAATGATGGTTAGCTTGTAGTTTGCCTTTGGTTAATAATTGTTAGCCAGTGTACGAGATAAACGATAGCAGTGAAACAGTGATCGATGGTGTTTTCAACGTACTGCTGAAGCTAAAACAATCGAATTGGCAGATTGATTAGCTATTATTGGCCTTCTACGCATAATTCAAATAGCCGAGAATCGTTAGGAAACAGCAGGCCAGATGATACCTCATCAATCCGACACCCCTAAGGAGAGTTTTGCACTGATAACCACACACATCCGGCTTTCTATAGCAAGCAGCAGTGTAC                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM594553             [                                                                                                                                                                                                                                                                                                                                                              ccgGCCAATGTCTACAACGTAGTTTCGAAAACCAGGTTTTTGTGGTGTTGAATGATGGTTAGCTTGTAGTTTGCCTTTGGTTAATAATTGTTAGCCAGTGTACGAGATAAACGATAGCAGTGAAACAGTGATCGATGGTGTTTTCAACGTACTGCTGAAGCTAAAACAATCGAATTGGCAGATTGATTAGCTATTATTGGCCTTCTACGCATAATTCAAATAGCCGAGAATCGTTAGGAAACAGCAGGCCAGATGATACCTCATCAATCCGACACCCCTAAGGAGAGTTTTGCACTGATAACCACACACATCCGGCTTTCTATAGCAAGCAGCAGTGTACACTTTCATTGCTTACATACTGCTGTCGATTTGCCTGCCAGTGAAGCCCCCGTTTGTGATCCACCCTTCGCTGAACTGATAATTAACATGTCTGTAATGAACAAAGCTAACATTGGGATACCTTATTCATGCCAGAACCGACGTTACGAAATGGAAAACTGAGAAGGATTGTACCGGGAGAGGAGCTGTATGACGTTACAGCACACCTTATATTGACAAACTGAAGATCGCAGTTTCAGCGAATAGTTTCGCTGTAGCTCTATCTATTGATTCGATCATTTGCCTATTTGCGGATAGT]


>consensus_8505#0 CCGTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGA GCTTCCCAATCTGTGTGTGTGTGTGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCT AGAAACTAGCACGGAAGTGAAATAAAAAAAAAATCACAAACCCCCTCCCCCACACACAAT GTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTT TCTCGGCAGTGTACTAGCCGCAAGCAATGGTAAGTCGGCAGAGGGTCGACAGTAACCTTC GTGAGTGTAAAATGTGTCTGGGTTGGTGGCGTTGCGCATTAGACAATGTGTCTGCCAATG TCTACAACGTAGTTTCGGAAACCAGGTTTTTGTGGTGTTGAATGATGGTTAGCTTGTAGT TTGCCTTTGGTTAATAATTGTTAGCCAGTGTACGAGATAAACGATAGCAGTGAAACAGTG ATCGATGGTGTTTTCAACGTACTGCTGAAGCTAAAACAATCGAATTGGCAGATTGATTAG CTATTATTGGCCTTCTACGCATAATTCAAATAGCCGAGAATCGTTAGGAAACAGCAGGCC AGATGATACCTCATCAATCCGACACCCCTAAGGAGAGTTTTGCACTGATAACCACACACA TCCGGCTTTCTATAGCAAGCAGCAGTGTACACTTTCATTGCTTACATACTGCTGTCGATT TGCCTGCCAGTGAAGCCCCCGTTTGTGATCCACCCTTCGCTGAACTGATAATTAACATGT CTGTAATGAACAAAGCTAACATTGGGATACCTTATTCATGCCAGAACCGACGTTACGAAA TGGAAAACTGAGAAGGATTGTACCGGGAGAGGAGCTGTATGACGTTACAGCACACCTTAT ATTGACAAACTGAAGATCGCAGTTTCAGCGAATAGTTTCGCTGTAGCTCTATCTATTGAT TCGATCATTTGCCTATTTGCGGATAGT



consensusID : consensus_8505#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 871
fasta sequence
                              [AGATCCCCGAGGTTATCGCTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAA--TCTGTGTGTGTGTG----TGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATA-AAAAAAAAATCACAAACCCCCTC-CCCC-ACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATC-TTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGACTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGTCCAACCGATCAGAACCTGATCGTCGGTGGTACGGCCGCACGGTTTGGCGAGTTTCCGCACATGGCCCGGCTGGCCATGCCGGACGAGAACGGTGCCATGGTGTTTCGCTGCGGCGCAACGCTGATCAGCGAACAGTGGGTTATGACNGCCGCACACTGTCTGGAGTCGCAAACGATCGTGGTGCGGCT-GGGTGAGCTCAAGGAGGGCAACGACGAGTTTGGCGACCCGGTCGATGTCCAGGTGACACNGATCGTGAAGCATCCTAACTACCAAACCGCGCACCGTGTATAACG]

[+] EMBL AL694579             [AGATCCCCGAGGTTATCGCTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAA  TCTGTGTGTGTGTG    TGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATA AAAAAAAAATCACAAACCCCCTC CCCC ACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATC TTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGA TACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGACTACCAGAGCGCATCCAATTCCGGGCTG                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM625032             [          ccgcgTCGCTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAA  TCTGTGTGTGTGTGTGTATGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATATAAAAAAAAATCACGAACCCCCTC CCCCGCCACACAATGTCACCAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGGTTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGACTACCAG                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX624187             [                     GTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAATCTCTGTGTGTGTGTG    TGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATA TAAAAAAAATCACGAACCCCCTCTCCCG CCACACAATGTCACAAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGATTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGACTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCCTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGCCCAACCGATCAGAACCTGATCGTCGGTGGTACGGCCGCACGGTTTGGCGAGTTTCCGCACATGGCCCGGCTGGCCATGCCGGACGAAAACGGTGCCATGGTGTTCCGCTGCGGCGCAACGCTGATCAGCGAACAGTGGGTTATGACNGNCGCACACTGTCTGGAGTCGCAAACGATCGTGGTGCGGCT GGGTGAGCTCAAAGANGGCAGCGACGAGTTTGGCGA                                                                     ]
[+] EMBL BX625674             [                      TGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAA  TCTGTGTGTGTGTG    TGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATA AAAAAAAAATCACAAACCCCCTC CCCC ACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATC TTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGACTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGTCCAACCGATCAGAACCTGATCGTCGGTGGTACGGCCGCACGGTTTGGCGAGTTTCCGCACATGGCCCGGCTGGCCATGCCGGACGAGAACGGTGCCATGGTGTTTCGCTGCGGCGCAACGCTGATCAGCGAACAGTGGGTTATGACGGCCGCACACTGTCTGGAGTCGCAAACGATCGTGGTGCGGCT GGGTGAGCTCAAGGAGGGCAACGACGAGTTTGGCGACCCGGTCGATGTCCAGGTGACACNGATCGTGAAGCATCCTAACTACCAAACCGCGCACCGTGTATAACG]
[+] EMBL BX626030             [                      TGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAA  TCTGTGTGTGTGTG    TGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATA AAAAAAAAATCACAAACCCCCTC CCCC ACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATC TTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGACTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGTCCAACCGATCAGAACCTGATCGTCGGTGGTACGGCCGCACGGTTTGGCGAGTTTCCGCACATGGCCCGGCTGGCCATGCCGGACGAGAACGGTGCCATGGTGTTTCGCTGCGGCGCAACGCTGATCAGCGAACAGTGGGTTATGACGGCCGCACACTGTCTGGAGTCGCAAACGATCGTGGTGCGGCT GGGTGAGCTCAA                                                                                             ]
[+] EMBL BX623901             [                                                     GCTGCCTGTAGACATCGTCAGGAGCTTCCCAA  TCTGTGTGTGTGTG    TGGCTCATTGATTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATA AAAAAAAAATCACAAACCCCCTC CCCC ACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGACTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGTCCAACCGATCAGAACCTGATCGTCGGTGGTACGGCCGCACGGTTTGGCNAGTTTCCGCACATGGCCCGGCTGGCCATGCCGGACNAGAACNGTGCCATGGTGTTTCGCTGCGGCGCAACGCTGATCAGCGAACAGTGGGTTATGACNGCCGCACACTGTCTGGAGTCGCAAACGATCGTGGTGCGGCTGGGGTGAGCTCNANGAGGGCAACGACG                                                                               ]


>consensus_8505#1 AGATCCCCGAGGTTATCGCTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCT GTAGACATCGTCAGGAGCTTCCCAATCTGTGTGTGTGTGTGGCTCATTGATTTGTTAGTG CATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATAAAAAAAAAATCACAAACCCC CTCCCCCACACACAATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCC TCAGCGCGATCTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTG CGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAA AGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGC TTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAA AGTGCCGAGACTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCG GCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGTCCAACCGATCAGAACCTGATCG TCGGTGGTACGGCCGCACGGTTTGGCGAGTTTCCGCACATGGCCCGGCTGGCCATGCCGG ACGAGAACGGTGCCATGGTGTTTCGCTGCGGCGCAACGCTGATCAGCGAACAGTGGGTTA TGACNGCCGCACACTGTCTGGAGTCGCAAACGATCGTGGTGCGGCTGGGTGAGCTCAAGG AGGGCAACGACGAGTTTGGCGACCCGGTCGATGTCCAGGTGACACNGATCGTGAAGCATC CTAACTACCAAACCGCGCACCGTGTATAACG



consensusID : consensus_8505#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGACCGTCGCTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAATCTCTGTGTGTGTGGCTCATCGAGTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATATAAAAAAAATCACGAACCCCCTCTCCCGCCACACAATGTCACCCACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGATTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGCCC]

[+] EMBL BM579813             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGACCGTCGCTAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCTTCCCAATCTCTGTGTGTGTGGCTCATCGAGTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATATAAAAAAAATCACGAACCCCCTCTCCCGCCACACAATGTCACCCACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGGAATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGACTACCGTGAGCGCTTGCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGATTACCAGAGCGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGCCC]


>consensus_8505#2 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGACCGTCGC TAGTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAGCT TCCCAATCTCTGTGTGTGTGGCTCATCGAGTTGTTAGTGCATGTAGCGCGAACCTAGAAA CTAGCACGGAAGTGAAATATAAAAAAAATCACGAACCCCCTCTCCCGCCACACAATGTCA CCCACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTTTTTTTCT CGGCAGTGTACTAGCCGCAAGCAATGAAGGAGAGTCGTGTGCGTATGGCAACGAGCCCGG AATCTGCCAAGGCTATAATCTGTGCCGTCCGCTTCTGGAAAAGTCACGCATTGTAAAAAT CTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCTGTCCGCTTGACTACCGTGAGCGCTT GCAGCAGCTGAACGATCCAAACCAGCGTGTCAGTGAACGAAAGTGCCGAGATTACCAGAG CGCATCCAATTCCGGGCTGCTGTTCGGTTCGCTAGCGGTCGGCTCGTCGGTGGTGAAGCT AAAGCCCCGCGCCCAATGCCC



consensusID : consensus_8505#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 259
fasta sequence
                              [TCGAGCAGATCGGNCACGAGGTGTCGCTAGTTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAAGCTTCCCCAAATCTCTGTGTGTGTGGCTCATCGAGTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATATAAAAAAAATCACGAACCCCTCTCCGCAACATGTCACCACATTGATACGCACGGTGGTCACGCGATCGCCTCAGCGATCTTTTCTCGGA]

[+] EMBL AL696780             [TCGAGCAGATCGGNCACGAGGTGTCGCTAGTTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGGAAGCTTCCCCAAATCTCTGTGTGTGTGGCTCATCGAGTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATATAAAAAAAATCACGAACCCCTCTCCGCAACATGTCACCACATTGATACGCACGGTGGTCACGCGATCGCCTCAGCGATCTTTTCTCGGA]


>consensus_8505#3 TCGAGCAGATCGGNCACGAGGTGTCGCTAGTTGTTGGGTGTCGTCCGGTGCAAGTTGCAG CAGCTGCCTGTAGACATCGTCAGGAAGCTTCCCCAAATCTCTGTGTGTGTGGCTCATCGA GTTGTTAGTGCATGTAGCGCGAACCTAGAAACTAGCACGGAAGTGAAATATAAAAAAAAT CACGAACCCCTCTCCGCAACATGTCACCACATTGATACGCACGGTGGTCACGCGATCGCC TCAGCGATCTTTTCTCGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8505#1      ------------------------------------------AGATC--CCCGAGGTTAT 16
consensus_8505#2      CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCG--TCCG-GACCGT 57
consensus_8505#3      ------------------------------------TCGAGCAGATCGGNCACGAGGTGT 24
consensus_8505#0      ------------------------------------------------------------
                                                                                  

consensus_8505#1      CGCTAGT-GTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGG 75
consensus_8505#2      CGCTAGT-GTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGG 116
consensus_8505#3      CGCTAGTTGTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGG 84
consensus_8505#0      CCGTAGT-GTTGGGTGTCGTCCGGTGCAAGTTGCAGCAGCTGCCTGTAGACATCGTCAGG 59
                      *  **** ****************************************************

consensus_8505#1      A-GCTTCCCAATCTGTGTGTGTGTGTGGCTCATTGATTTGTTAGTGCATGTAGCGCGAAC 134
consensus_8505#2      A-GCTTCCCAATCTCTGTGTGTGTG--GCTCATCGAGTTGTTAGTGCATGTAGCGCGAAC 173
consensus_8505#3      AAGCTTCCCCAAATCTCTGTGTGTGTGGCTCATCGAGTTGTTAGTGCATGTAGCGCGAAC 144
consensus_8505#0      A-GCTTCCCAATCTGTGTGTGTGTGTGGCTCATTGATTTGTTAGTGCATGTAGCGCGAAC 118
                      * ******* *  * * ********  ****** ** ***********************

consensus_8505#1      CTAGAAACTAGCACGGAAGTGAAATAAAAAAAAAATCACAAACCCCCTCCCCCAC-ACAC 193
consensus_8505#2      CTAGAAACTAGCACGGAAGTGAAATATAAAAAAAATCACGAACCCCCTCTCCCGCCACAC 233
consensus_8505#3      CTAGAAACTAGCACGGAAGTGAAATATAAAAAAAATCACGAACCCCTCTCC-----GCAA 199
consensus_8505#0      CTAGAAACTAGCACGGAAGTGAAATAAAAAAAAAATCACAAACCCCCTCCCCCAC-ACAC 177
                      ************************** ************ ******    *      ** 

consensus_8505#1      AATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTT 253
consensus_8505#2      AATGTCACCCACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTT 293
consensus_8505#3      CATGTCACCA--CATTGATA-CGCACGGTGG-TCACGC-GATCGCC-TCAGCG--ATCTT 251
consensus_8505#0      AATGTCACTAACCATTGATAACGCACGGTGGATCACGCCGATCGCCCTCAGCGCGATCTT 237
                       *******    ******** ********** ****** ******* ******  *****

consensus_8505#1      TTTT-CTCGGCAGTGTACTAGCCGCAAGCAATGA-AGGAGAGTCGTGTGCGTATGGCAAC 311
consensus_8505#2      TTTTTCTCGGCAGTGTACTAGCCGCAAGCAATGA-AGGAGAGTCGTGTGCGTATGGCAAC 352
consensus_8505#3      TT---CTCGGA------------------------------------------------- 259
consensus_8505#0      TTTT-CTCGGCAGTGTACTAGCCGCAAGCAATGGTAAGTCGGCAGAGGGTCGACAGTAAC 296
                      **   *****                                                  

consensus_8505#1      ------GAGCCCGGAATCTGCCAAGGCTATAATCTGTGC-CGTC------CGCTTCTGGA 358
consensus_8505#2      ------GAGCCCGGAATCTGCCAAGGCTATAATCTGTGC-CGTC------CGCTTCTGGA 399
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      CTTCGTGAGTGTAAAATGTGTCTGGGTTGGTGGCGTTGCGCATTAGACAATGTGTCTGCC 356
                                                                                  

consensus_8505#1      AAAGTC----ACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCT 414
consensus_8505#2      AAAGTC----ACGCATTGTAAAAATCTGTGGCTACACGTCCCAACAAGCAGTTGTGTGCT 455
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      AATGTCTACAACGTAGTTTCGGAAACCAGGTTTTT--GTGGTGTTGAATGATGGTTAGCT 414
                                                                                  

consensus_8505#1      GTCCGCTTGACTACCGTGAGCGCTTGC-AGCAGCTGAACGATCCAAAC-----CAGCGTG 468
consensus_8505#2      GTCCGCTTGACTACCGTGAGCGCTTGC-AGCAGCTGAACGATCCAAAC-----CAGCGTG 509
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      TGTAGTTTGCCTTTGGTTAATAATTGTTAGCCAGTGTACGAGATAAACGATAGCAGTGAA 474
                                                                                  

consensus_8505#1      TCAGTGAACGAAAGTGCCG-----AGACTACCAGAGCGCATCCAATT---CCGGGCTGCT 520
consensus_8505#2      TCAGTGAACGAAAGTGCCG-----AGATTACCAGAGCGCATCCAATT---CCGGGCTGCT 561
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      ACAGTGATCGATGGTGTTTTCAACGTACTGCTGAAGCTAAAACAATCGAATTGGCAGATT 534
                                                                                  

consensus_8505#1      GTTCGGTT--CGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGT 578
consensus_8505#2      GTTCGGTT--CGCTAGCGGTCGGCTCGTCGGTGGTGAAGCTAAAGCCCCGCGCCCAATGC 619
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      GATTAGCTATTATTGGCCTTCTACGCATAATTCAAATAGCCGAGAATCGTTAGGAAACAG 594
                                                                                  

consensus_8505#1      CCAACCGATCAGAACCTGATCG-TCGGTGGTACGGCCGCACGGTTTGGCGAGTTTCCGCA 637
consensus_8505#2      CC---------------------------------------------------------- 621
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      CAGGCCAGATGATACCTCATCAATCCGACACCCCTAAGGAGAGTTTTGCACTGATAACCA 654
                                                                                  

consensus_8505#1      CATG-GCCCGGCTGGCCATGCCGGACGAGAACGGTGCCAT--GGTGTTTCGCTGCGGCGC 694
consensus_8505#2      ------------------------------------------------------------
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      CACACATCCGGCTTTCTATAGCAAGCAGCAGTGTACACTTTCATTGCTTACATACTGCTG 714
                                                                                  

consensus_8505#1      AACGCTGATCAGCGAACAGTGGGTT-ATGACNGCCGCACACTGTCTGGAGTCGCAAACGA 753
consensus_8505#2      ------------------------------------------------------------
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      TCGATTTGCCTGCCAGTGAAGCCCCCGTTTGTGATCCACCCTTCGCTGAACTGATAATTA 774
                                                                                  

consensus_8505#1      TCGTGG-TGCGGCTGGGTGAGCTCAAGGAGGGCAACGACGAGTTTGGCGACCCGGTCGAT 812
consensus_8505#2      ------------------------------------------------------------
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      ACATGTCTGTAATGAACAAAGCTAACATTGGGATACCTTATTCATGCCAGAACCGACGTT 834
                                                                                  

consensus_8505#1      GTCCAGGTGACACNGATCGTGAAGCATCCTAACTACCAAACCGCGCACCGTGTATAACG- 871
consensus_8505#2      ------------------------------------------------------------
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      ACGAAATGGAAAACTGAGAAGGATTGTACCGGGAGAGGAGCTGTATGACGT-TACAGCAC 893
                                                                                  

consensus_8505#1      ------------------------------------------------------------
consensus_8505#2      ------------------------------------------------------------
consensus_8505#3      ------------------------------------------------------------
consensus_8505#0      ACCTTATATTGACAAACTGAAGATCGCAGTTTCAGCGAATAGTTTCGCTGTAGCTCTATC 953
                                                                                  

consensus_8505#1      ----------------------------------
consensus_8505#2      ----------------------------------
consensus_8505#3      ----------------------------------
consensus_8505#0      TATTGATTCGATCATTTGCCTATTTGCGGATAGT 987
                                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)