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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8524#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1759 fasta sequence
[AGTAACCTATTTTGTTTTATAAGAATTAATTACACATCCAGTAAACGTTTCGACAGGGTTGCCGTTACTAGC-TTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACTTTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGCCGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGACGACTGAGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGCTTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGC-GGGACAATTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTTTTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTGAAGCAAGTTTCGATTCAGCGCGACATTTGTCATGGAACAATTCTTCGATGCTTTTCGTAAAACACTCTGTCAGCTTTTGTTCTCGTGTTTGCACTTCGTTTTGCTGTTGATTGTCTTCCAGCGTTCTATTGATGCCATCTGCCCCATGACTGAAAATGTCTTCCTTTTGCTCGGCTACTTTTGGCGCTATTCGTATGTGACTAGAGGTTTCTATCTTCAGCAGCTCGTACTGGGCCCGCCAATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGTTGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTGTTCTGCACCTGGGACGCACTGTTCGAGCTGGCCGTGAAATGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCAAACCATCTTCACTTCCAATCGTGCTTTCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTACGGTAAGTAGTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGCAGCTCCCGGTTGAGGCTTTCGATGCGATTTTGTAACTGCTTTACC-TCTGCGCTCTTATCTTCAACGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGCCCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCGTTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACACGCCGCTCGAGCTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCAGTGTCGCCTCTTTCAGGCGTAAAGATTCCCGCAGGGAAGAGTTTTTGTTCTGTTCATCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCTAGTTTCTGGTATTTGTTGGAGTTTTCTGCTTCCATTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCATGTAGCATTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAATATTTTTTCGCACTGCTACGGAAAATG---CGGACGCGTGGGCGG]
[-] EMBL BM598634 [AGTAACCTATTTTGTTTTATAAGAATTTATTACACATCCAGTAAACGTTTCGACAGGGTTGCCGTTACTAGC TTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACTTTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGCCGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGACGACTGAGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGCTTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGC GGGACAATTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTTTTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTGAAGCAAGTTTCGATTCAGCGCGACATTTGTCATGGAACAATTCTTCGATGCTTTTCGTAAAACACTCTGTCAGCTTTTGTTCTCGTGTTTGCACTTCGTTTTGCTGTTGATTGTCTTCCAGCGTTCTATTGATGCgg ]
[+] EMBL CNS08ETW [ GAATTAACCACACATCCATTAAACGTTTCGACAGGGTTGCCGTTACTAGC TTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACTTTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACAAGCCGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGACGACTGAGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGCTTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGC GGGACAATTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTTTTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTGAAGCAAGTTTCGATTCAGCGCGACATTTGTCATGGAACAATTCTTCGATGCTTTTCGTAAAACACTCTGTCAGCTTTTGTTCTCGTGTTTGCACTTCGTTTTGCTGTTGATTGTCTTCCAGCGTTCTATTGATGCCATCTGCCCCATGACTGAAAATGTCTTCCTTTTGCTCGGCTACTTTCGGCGCTATTCGTATGTGACTAGAGGTTTCTATCTTCAGCAGCTCGTACTGGGCCCGCCAATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGTTGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTGTTCTGCACCTGGGACGCACTGTTCGAGCTGGCCGCGAAATGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCAAACCATCTTCACTTCCAATCGTGCTTTCTGCTTCCGAAACCTTAGATTCAAGCTCCGAG ]
[+] EMBL CNS08H4E [ gATTACACATCCAGTAAACGTTTCGACAGGGTTGCCGTTACTAGC TTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACTTTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGCCGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGACGACTGAATTCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGCTTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGCGGGGACAACTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTTTTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTTTTTGACATTCAATGAAATGTGAAGCAAGTTTCGATTCAGCGCGACATTTGTCATGGAACAATTCTTCGATGCTTTTCGTAAAACACTCTGTCAGCTTTTGTTCTCGTGTTTGCACTTCGTTTTGCTGTTGATTGTCTTCCAGCGTTCTATTGATGCCATCTGCCCCATGACTGAAAATGTCTTCCTTTTGCTCGGCTACTTTTGGCGCTATTCGTATGTTACTAGAGGTTTCTATCTTCAGCAGCCCGTACTGGGCCCGCCAATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGTTGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTTTTCTGCACCTGGGACGCACTGTTCGAGCTGGCCGTGAAAAGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCGAACCATCTTCACTTCCAATCGTGCTTTCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTACGGTAAGTAGTTCGAGCTCTTTC ]
[-] EMBL CNS08H4D [ aACTAGCTTTATTGCATAATGCGCGAAAAAAAAAACAAACTTGAGTATATGCGACTTTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGCCGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGACGACTGAGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGCTTATAACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGC GGGACAAACTATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTTTTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTGAAGCAAGTTTCGATTCAGCGCGACATTTGTCATGGAACAATTCTTCGATGCTTTTCGTAAAACACTCTGTCAGCTTTTGTTCTCGTGTTTGGACTTCGTTTTGCTGTTGATTGTCTTCCAGCGTTCTATTGATGCCATCTGCCCCATGACTGAAAATGTCTTCCTTTTGCTCGGCTACTTTTGGCGCTATTCGTATGTGACTAGAGGTTTCTATCTTCAGCAGCTCGTACTGGGCCCGCCAATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGTTGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTGTTCTGCACCTGGGACGCACTGTTCGAGCTGGCCGTGAAATGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCGAACCATCTTCACTTCCAATCGTGCTTGCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTACG ]
[-] EMBL BX606402 [ CACATCCGTCGTAACACTCAAACCATCTTCACTTCCAATCGTGCTTGCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTACGGTAAGTAGTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGCAGCTCCCGGTTGAGGCTTTCGATGCGATTTTGTAACTGCTTTACC TCTGCGCTCTTATCTTCAACGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGCCCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGAGTTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACACGCCGCTCGAGCTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCAGTGTCGCCTCTTTCAGGCGTAAAGATTCCCGCAGGGAAGAGTTTTTGTTCTGTTCATCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCTAGTTTCTGGTATTTGTTGGAGTTTTCTGCTTCCATTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCATGTAGCATTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCTT ]
[-] EMBL CNS09CS9 [ GTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGCAGCTCCCGGTTGAGGCTTTCGATGCGATTTTGTAACTGCTTTACC TCTGCGCTCTTATCTTCAACGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGCCCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCGTTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACACGCCGCTCGAGCTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCAGTGTCGCCTCTTTCAGGCGTAAAGATTCCCGCAGGGAAGAGTTTTTGTTCTGTTCATCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCTAGTTTCTGGTATTTGTTGGAGTTTTCTGCTTCCATTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCATGTAGCATTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAAT ]
[-] EMBL BM600332 [ AACTGCTTTACCGTCTGCGCTCTTATCTTCAACGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGCCCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCGTTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACACGCCGCTCGAGCTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCAGTGTCGCCTCTTTCAGGCGTAAAGATTCCCGCAGGGAAGAGTTTTTGTTCTGTTCATCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCTAGTTTCTGGTATTTGTTGGAGTTTTCTGCTTCCATTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCATGTAGCATTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAATATTTTTTCGCACTGCTACGGAAAATG CGGACGCGTGGGCGG]
[-] EMBL BM582599 [ TTTCTGCAGCTCTTCCGCGATCACGCCCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCGTTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACACGCCGCTCGAGCTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCAGTGTCGCCTCTTTCAGGCGTAAAGATTCCCGCAGGGAAGAGTTTTTGTTCTGTTCATCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCTAGTTTCTGGTATTTGTTGGAGTTTTCTGCTTCCATTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCATGTAGCATTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAATATTTTTTCGCACTGCTACGGAAAATGACCCGGACGCGTGGGCGG]
consensusID : consensus_8524#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1476 fasta sequence
[AACACACATCCAGTAAACGTTTCGACAGGGTTGCCGTTACTAGCTTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACTTTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGCCGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGCACGACTGAGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGCTTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGCGGGACAATTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTTTTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTGAAGCAAGTTTCTATCTTCAGCAGCTCGTACTGGGCCCGCCAATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGTTGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTGTTCTGCACCTGGGACGCACTGTTCGAGCTGGCCGTGAAATGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCAAACCATCTTCACTTCCAATCGTGCTTGCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTACGGTAAGTAGTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGCAGCTCCCGGTTGAGGCTTTCGATGCGATTTTGTAACTGCTTTACCTCTGCGCTCTTATCTTCAACGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGCCCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCGTTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACACGCCGCTCGAGTTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCAGTGTCGCCTCTTTCAGGCGTAAAGATTCCCGCAGGGAAGAGTTTTTGTTTTTTGAGTATTCGGTGGCTAGTTTCTGGTATTTGTTGGAGTTTTCTGCTTCCATTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCTTGTAGCATTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATGCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAATATTTTTTCGCACTGCTACGGAAAATGACCACGG]
[+] EMBL CNS09CSA [AACACACATCCAGTAAACGTTTCGACAGGGTTGCCGTTACTAGCTTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACTTTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGCCGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGCACGACTGAGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGCTTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGCGGGACAATTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTTTTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTGAAGCAAGTTTCTATCTTCAGCAGCTCGTACTGGGCCCGCCAATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGTTGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTGTTCTGCACCTGGGACGCACTGTTCGAGCTGGCCGTGAAATGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCAAACCATCTTCACTTCCAATCGTGCTTGCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTACGGTAAGTAGTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGC ]
[-] EMBL BX622067 [ GCTCCGAGTTCCGTACGGTAAGTAGTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGCAGCTCCCGGTTGAGGCTTTCGATGCGATTTTGTAACTGCTTTACCTCTGCGCTCTTATCTTCAACGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGCCCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCGTTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACACGCCGCTCGAGTTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCAGTGTCGCCTCTTTCAGGCGTAAAGATTCCCGCAGGGAAGAGTTTTTGTTTTTTGAGTATTCGGTGGCTAGTTTCTGGTATTTGTTGGAGTTTTCTGCTTCCATTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCTTGTAGCATTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATGCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAATATTTTTTCGCACTGCTACGGAAAATGACCACGG]
consensusID : consensus_8524#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 433 fasta sequence
[GATTTTCGGAGTGTCGCCTCTTTCCAGGCGTAAAGATTCCCCGCAGGGAAGAGTTTTTGGTTCTGTTCCATCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCTAGTTTCTCGGTATTTGTTCGGAGTTTTCTGCTTCCACTTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCGATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCTTGTAGCATTGCGGGCGTATTGCTTTATGCTGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGATCTCANGTGCCGATTCTGCC]
[-] EMBL BX468843 [GATTTTCGGAGTGTCGCCTCTTTCCAGGCGTAAAGATTCCCCGCAGGGAAGAGTTTTTGGTTCTGTTCCATCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCTAGTTTCTCGGTATTTGTTCGGAGTTTTCTGCTTCCACTTGCTTCCATCTATGCTTGGCAGCTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCATCGGCGGTCGGAGCGATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCTTGTAGCATTGCGGGCGTATTGCTTTATGCTGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCTTAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGATCTCANGTGCCGATTCTGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8524#0 AGTAACCTATTTTGTTTTATAAGAATTAATTACACATCCAGTAAACGTTTCGACAGGGTT 60
consensus_8524#1 ----------------------------AACACACATCCAGTAAACGTTTCGACAGGGTT 32
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 GCCGTTACTAGCTTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACT 120
consensus_8524#1 GCCGTTACTAGCTTATTGCATAATGCGCGCACACACACACACACTTGAGTATATGCGACT 92
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 TTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGC 180
consensus_8524#1 TTCCTTCTAGCACCGGAAGGAGTATAGAATGATATTCACATTTCAGGGAGAAGCACACGC 152
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 CGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAG-ACGACTG 239
consensus_8524#1 CGCGAACTGGATACAACTCTTGGGGTGTGTTGCTACAACACAAAGTGGAAAGCACGACTG 212
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 AGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGC 299
consensus_8524#1 AGTGCGTTCGATTTGTCCGCTTTCGGGACTACTTGGCCTTGGCTAACTGATCACTTAGGC 272
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 TTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGCGGGACA 359
consensus_8524#1 TTATCACTTGCTCGGTCAGGACACTGATTTGTTCCTCGTAGTTGAGCCGCGTGCGGGACA 332
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 ATTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTT 419
consensus_8524#1 ATTCATCTTCGATGATACGGTAACGACGCTCCTCTTCTCTGTTGGCCTCTTCCCGGTCTT 392
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 TTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTG 479
consensus_8524#1 TTAGACGACTCTTTAAAACATCCAAATGGGTCTGCAGTCTTTGACATTCAATGAAATGTG 452
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 AAGCAAGTTTCGATTCAGCGCGACATTTGTCATGGAACAATTCTTCGATGCTTTTCGTAA 539
consensus_8524#1 AAGCAAGTTTC------------------------------------------------- 463
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 AACACTCTGTCAGCTTTTGTTCTCGTGTTTGCACTTCGTTTTGCTGTTGATTGTCTTCCA 599
consensus_8524#1 ------------------------------------------------------------
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 GCGTTCTATTGATGCCATCTGCCCCATGACTGAAAATGTCTTCCTTTTGCTCGGCTACTT 659
consensus_8524#1 ------------------------------------------------------------
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 TTGGCGCTATTCGTATGTGACTAGAGGTTTCTATCTTCAGCAGCTCGTACTGGGCCCGCC 719
consensus_8524#1 -------------------------------TATCTTCAGCAGCTCGTACTGGGCCCGCC 492
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 AATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGT 779
consensus_8524#1 AATGGTTCAGCTCCTTTTCGAGAAACACAACCCGATCGTCCTGGGTTCCAGCTGTGGTGT 552
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 TGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTGTTCTGCACCTGGGACGCACTGT 839
consensus_8524#1 TGATGTTGTTGTTATTGGTGGTGTTGACGGTGCCATTGTTCTGCACCTGGGACGCACTGT 612
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 TCGAGCTGGCCGTGAAATGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCAAACCAT 899
consensus_8524#1 TCGAGCTGGCCGTGAAATGGTTGAAATGGTTTTCCACATCCGTCGTAACACTCAAACCAT 672
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 CTTCACTTCCAATCGTGCTTTCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTA 959
consensus_8524#1 CTTCACTTCCAATCGTGCTTGCTGCTTCCGAAACCTTAGATTCAAGCTCCGAGTTCCGTA 732
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 CGGTAAGTAGTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGCAGCT 1019
consensus_8524#1 CGGTAAGTAGTTCGAGCTCTTTCCGCAGCTTTTGCTCCACCGTCGCCTGCTGCTGCAGCT 792
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 CCCGGTTGAGGCTTTCGATGCGATTTTGTAACTGCTTTACCTCTGCGCTCTTATCTTCAA 1079
consensus_8524#1 CCCGGTTGAGGCTTTCGATGCGATTTTGTAACTGCTTTACCTCTGCGCTCTTATCTTCAA 852
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 CGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGC 1139
consensus_8524#1 CGCTGTTTGATAGCTGTGCATTTTCGAGAATTTTTTTCTGCAGCTCTTCCGCGATCACGC 912
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 CCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCG 1199
consensus_8524#1 CCGTTGTTTCCGTGCCCGCGACAGCGTTGAGGTCGTTGTTGGATGATTTCGTTTTTAGCG 972
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 TTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACAC 1259
consensus_8524#1 TTTTGCCACCGGACACTTTCTTCAGCTCGTGCTCGAGATTTTCCTGCAATGCTGCAACAC 1032
consensus_8524#2 ------------------------------------------------------------
consensus_8524#0 GCCGCTCGAGCTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCA 1319
consensus_8524#1 GCCGCTCGAGTTGCTTGTTGCGGAACCCCAAACTGTCCACTTCCTGTTCCGATTTTCGCA 1092
consensus_8524#2 --------------------------------------------------GATTTTCGGA 10
******** *
consensus_8524#0 GTGTCGCCTCTTTC-AGGCGTAAAGATTCCC-GCAGGGAAGAGTTTTTG--TTCTGTTCA 1375
consensus_8524#1 GTGTCGCCTCTTTC-AGGCGTAAAGATTCCC-GCAGGGAAGAGTTTTTG--TT------- 1141
consensus_8524#2 GTGTCGCCTCTTTCCAGGCGTAAAGATTCCCCGCAGGGAAGAGTTTTTGGTTCTGTTCCA 70
************** **************** ***************** *
consensus_8524#0 TCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCT 1435
consensus_8524#1 -----------------------------------------TTTTGAGTATTCGGTGGCT 1160
consensus_8524#2 TCGAGAACGGCCCGCTTCAGCACGCTCGCTTGGGCACGGAGTTTTGAGTATTCGGTGGCT 130
*******************
consensus_8524#0 AGTTTCT-GGTATTTGTT-GGAGTTTTCTGCTTCCA-TTGCTTCCATCTATGCTTGGCAG 1492
consensus_8524#1 AGTTTCT-GGTATTTGTT-GGAGTTTTCTGCTTCCA-TTGCTTCCATCTATGCTTGGCAG 1217
consensus_8524#2 AGTTTCTCGGTATTTGTTCGGAGTTTTCTGCTTCCACTTGCTTCCATCTATGCTTGGCAG 190
******* ********** ***************** ***********************
consensus_8524#0 CTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCA 1552
consensus_8524#1 CTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCA 1277
consensus_8524#2 CTTTCACTATACGGTAAAGAACTAACTCTGGGTGTCACAACAGATTGCTTCCAGCATGCA 250
************************************************************
consensus_8524#0 TCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCATGTAGCA 1612
consensus_8524#1 TCGGCGGTCGGAGCAATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCTTGTAGCA 1337
consensus_8524#2 TCGGCGGTCGGAGCGATTGGGAATGCGATATCTATCGGCTAGCGACTCATGCTTGTAGCA 310
************** ************************************* *******
consensus_8524#0 TTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCT 1672
consensus_8524#1 TTGTGGGCGTATTGCTTTATGCTAGGAGTAAGCAAGAAAGTTGTTCACTTTACATGCGCT 1397
consensus_8524#2 TTGCGGGCGTATTGCTTTATGCT-GGAGTAAGCAAGAAAGTTGTTCACTTTACATTCGCT 369
*** ******************* ******************************* ****
consensus_8524#0 TAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAATATTTTTTCGCACTG 1732
consensus_8524#1 TAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGAATATTTTTTCGCACTG 1457
consensus_8524#2 TAGATCACTTAAAAACTTTCTTTCCGTAGCACGGAAATTACGGA-TCTCANGTGCCGATT 428
******************************************** * * * * *
consensus_8524#0 CTACGGAAAATGCGGACGCGTGGGCGG 1759
consensus_8524#1 CTACGGAAAATGACCACGG-------- 1476
consensus_8524#2 CTGCC---------------------- 433
** *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||