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Anopheles gambiae
cluster # 8534 cluster # 8534       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8534#0 length = 1493 sequences # 9  
consensus_8534#1 length = 524 sequences # 1  
consensus_8534#2 length = 51 sequences # 1  

consensusID : consensus_8534#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1493
fasta sequence
                              [TGTTGTTTTTTTTGGCCTAAGTTTATTTTAAAAGTAAAATAAATACTTTTGCTGTCAGAGTACACGATAAAATTTTCTCCTTTTCTTTCTC----TCTTTCTCTCTTTCTA--TCTCTCTCTCTCTCTCTCGCTATCTCGCTATGCATCTCTTTCCCTATCTCTAACTCTATCTCTCTATCGATAGTATTAATCTGTTTTGTTGTTGTTGTTCTGAACTACACAAGAGACGTCCTCGCGACACATTTGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAAGAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTAGTAGTACGCAGCTGCACGGACTGGTGCAGCACGAGTAATGGAGGAAGAAAATAAGGGGAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCACCGCACTGTGTGCACACGTACCTATGTGTGTGTGTGTGTGTGTGTGTGTTTACGGGAACTATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGG-GGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAAGGGGCGCTGATTTTTGTTTGTTTCGTTTTCTCGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCTTCTCCCATACACATCCATACGAATCACCGGGGTTTGCGTCCGATTATGTAGAAGGGGGGAAGGGGGCGGGGGGGATGGTTTGTGTGGAGATAAAGGATTTAGAAAGCGAACAGCAGCAGGAAAGCCATCATAAGACAGAACAGACCCATGGCTTCAGACA-GGCGAAGCCCAGGATAGCGTACGAGAACAGCTGCTGCTTCAGCGACGGGTTTCTTGCGTAACCGATGATCAGCGACCCGAATACTGTTCCGATACCGGCACCAGATCCGGCAACACCGACGGTGGCAGCACCGGCTCCGATGAACTTGGCAGCGGAGTCAATGTCACGGGTGACCGGGGTAGTCTGGAATGACCGGACCTGTGGCAACAAAGCGACGGGCGCTGTTTTCTGGGCAGCGAGCGTCTGGCTCTGGGAGATGACGGCGCTGCTGGTCGGTGTAGCGTTA-CTCCACTTTCCGTCAGCACTTTGCGTGTGTTCTTGATGATGGTTTCCATGTTTTCAGCAAAGTTTTCCTTTTCCAAAACCATCTTCACACAGCAAAACAAATAAACTTCCTCACTGGCTGTACAAAAACAAAGCACCGGCTTTGCAGAATTGGACACACT]

[+] EMBL CNS090WU             [TGTTGTTTTTTTTGGCCTAAGTTTATTTTAAAAGTAAAATAAATACTTTTGCTGTCAGAGTACACGATAAAATTTTCTCCTTTTCTTTCTC    TCTTTCTCTCTTTCTA  TCTCTCCCTCTCTCTCTCGCTATCTCGCTATGCATCTCTTTCCCTATCTCTAACTCTATCTCTCTATCGATAGTATTAATCTGTTTTGTTGTTGTTGTTCTGAACTACACAAGAGACGTCCTCGCGACACATTTGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAAGAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTAGTAATTTGCAGCTGCACGGACTGGTGCAGCACGAGTAATGGAGGAAGAAAATAAGGGGAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGTTTGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCACCGCACTGTGTGCACACGTACCTATGTGTGTGTGTTTTTTTTTTTTTTTTTACGGGAACTATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGGTTTTTTTTTTGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCAGACCGGGGGCAAGGGGCGCTGATTTTTGTTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08QIY             [       TTTTTTAAAGTAAGTTTATTTTAAAAGTAAAATAAATACTTTTGCTGTCAGAGTACACGATAAAATTTTCTCCTTTTCTTTCTC    TCTTTCTCTCTTTCTA  TCTCTCTCTCTCTCTCTCGCTATCTCGCTATGCATCTCTTTCCCTATCTCTAACTCTATCTCTCTATCGATAGTATTAATCTGTTTTGTTGTTGTTGTTCTGAACTACACAAGAGACGTCCTCGCGACACATTTGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAAGAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTAGTAGTACGCAGCTGCACGGACTGGTGCAGCACGAGTAATGGAGGAAGAAAATAAGGGGAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCACCGCACTGTGT CACACGTACCTATGTGTGTGTGTGTTTTTTTGTGTTTATACGGGAACTATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGG GGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAAGGGGCGCTGATTTTTGTTTGTTTCGTTTTCTCGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTCGCTTCAGTTCGCTTCTCCCATACACATCCATACGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08ZN6             [                 TAAGTTTATTTTAAAAGTAAAATAAATACTTTTGCTGTCAGAGTACACGATAAAATTTTCTCCTTTTCTTTCTC    TCTTTCTCTCTTTCTA  TCTCTCTCTCTCTCTCTCGCTATCTCGCTATGCATCTCTTTCCCTATCTCTAACTCTATCTCTCTATCGATAGTATTAATCTGTTTTGTTGTTGTTGTTCTGAACTACACAAGAGACGTCCTCGCGACACATTTGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAAGAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTAGTAGTACGCAGCTGCACGGACTGGTGCAGCACGAGTAATGGAGGAAGAAAATAAGGGGAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCACCGCACTGTGTGCACACGTACCTATGTGTGTGTGTGTGTGTGTGTGTGTTTACGGGAACTATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGG GGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAAGGGGCGCTGATTTTTGTTTGTTTCGTTTTCTTGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCTTCTCCCATACACATCCATACGAATCACCGGGGTTTGCGTCCGATTATGTAGAACGGGGGAccccggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09H9I             [                                     AATAAATACTTTTGCTGTCAGAGTACACGATAAAATTTTCTCCTTTTCTTTCTCTCTTTCTTTCTCTCTTTCTATCTCTCTCTCTCTCTCTCTCGCTATCTCGCTATGCATCTCTTTCCCTATCTCTAACTCTATCTCTCTATCGATAGTATTAATCTGTTTTGTTGTTGTTGTTCTGAACTACACAAGAGACGTCCTCGCGACACATTTGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAAGAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTAGTAGTACGCAGCTGCACGGACTGGTGCAGCACGAGTAAAAAAAGAAGAAAAT AGGGGAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTCTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCTTAACTAGCGCCACCGCACTGTGTGCACACGTACCTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08QIX             [                                                                                                                                                                                                                           ACACAAGAGACGTCCTCGCGACACATTTGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAAGAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTAGTAGTACGCAGCTGCACGAACTGGTGCAGCACGAGTAATGGAGGAAGAAAATAAGGGGAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCACCGCACTGTGTGCACACGTACCTATGTGTGTGTGTGTGTGTGTGTGTGTTTACGGGAACTATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGG GGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAAGGGGCGCTGATTTTTGTTTGTTTCGTTTTCTCGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCTTCTCCCATACACATCCATACGAATCACCGGGGTTTGCGTCCGATTATGTAGAAGGGGGGAAGGGGGCGGGGGGGATGGTTTGTGTGGAGATAAAGGATTTAGAAAGCGAACAGCAGCAGGAAAGCCATCATAAGACAGAACAGACCCATGGCTTCAGACA GGCGAAGCCCAGGATAGCGTACGAGAACAGCTGCTGCTTCAGCGACGGGTTTCTTGCGTAACCGATGATCAGCGATCCGAATACTTTTGCGATACCagtag                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08ZN5             [                                                                                                                                                                                                                                                                           AGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAAGAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTAGTAGTACGCAGCTGCACGGACTGGTGCAGCACGAGTAATGGAGGAAAAAAATAAGGGAAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCACCGCACTGTGTGCACACGTACCTATGTGTGTGTGTGTGTGTGTGTGTGTTTACGGGAACTATCTAAAAATCGACACTATCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGG GGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAAGGGGCGCTGATTTTTGTTTGTTTCGTTTTCTTGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCATCTCCCATACACAACCATACGAATCACCGGAGTTTGCGTCCGATTATGTAGAAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS090WT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATGGGCCAAGGAACTAGGCCACAACCAGGGGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCACCGCACTGTGTGCACACGTACCTATGTGTGTGTGTGTGTGTGTGTGTGTTTACGGGAACTATCTTAAAATAAAAACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGG GGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAAGGGGCGCTTTTTTTTGTTTGTTTCGTTTTCTTGTCGGTATGTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS09E55             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTTTACGGGACCTATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGG GGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGACTGCTGACCGGGGGCAGGGGGCGCTGATTTTTGTTTTTTTCGTTTTCTCGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCTTCTCCCATACACATCCATACGAATCACCGGGGTTTGCGTCCGATTATGTAAACCGGGGGAAGGGGGCGGGGGGGATGGTTTGTGTGGAGATAAAGGATTTAGAAAGCGAACAGCAGCAGGAAAGCCATCATAAGACAGAACAGACCCATGGCTTCAGACAGGGCGAA CCAGGGATAGCGTACGAGAACAGCTGCTGCTTCAGCGACGGGTTTCTTGCGTAACCGATGATCAGCGACCCGAATACTGTTCCGATACCGGCACCAGATCCGGCAACACCGACGGTGGCAGCACCGGCTCCGATGAACTTGGCAGCGGAGTCAATGTCACGGGTGACCGGGGTAGTCTGGAATGACCGGACCTGTGGCAACAAAGCGACGGGCGCTGTTTTCTGGGCAGCGAGCGTCTGGCTCTGGGAGATGACGGCGCTGCTGGTCGGTGTAGCGTTA CTCCACTTTCCGTCAGCACTTTGCGTGTGTTCTTGATGATGGTTTCCATGTTTTCAGCAAAGTTTTCCTTTTCCAAAACCATCTTCACACAGCAAAA                                                               ]
[-] EMBL CNS09E54             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cGGACCTATC TAAAATCGACAC TTCTTCTG TTTCGCACGAAAGAGAG CCCTGT GGGG GGATGTTATG TACACCAACACCCGCTATCCGGGGAGGGGACTGCTGACCGGGGGCAGGGGGCGCTGATTTTTGTTTGTTTCGTTTTCTCGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCTTCTCCCATACACATCCATACGAATCACCGGGGTTTGCGTCCGATTATGTAGAAGGGGGGAAGGGGGCGGGGGGGATGGTTTGTGTGGAGATAAAGGATTTAGAAAGCGAACAGCAGCAGGAAAGCCATCATAAGACAGAACAGACCCATGGCTTCAGACA GGCGAAGCCCAGGATAGCGTACGAGAACAGCTGCTGCTTCAGCGACGGGTTTCTTGCGTAACCGATGATCAGCGACCCGAATACTGTTCCGATACCGGCACCAGATCCGGCAACACCGACGGTGGCAGCACCGGCTCCGATGAACTTGGCAGCGGAGTCAATGTCACGGGTGACCGGGGTAGTCTGGAATGACCGGACCTGTGGCAACAGAGCGACGGGCGCTGTGTTCTGGGCAGCGAGCGTCTGGCTCTGGGAGATGACGGCGCTGCTGGTCGGTGTAGCGTTAGCTCCACTTTCCGTCAGCACTTTGCGTGTGTTCTTGATGATGGTTTCCATGTTTTCAGCAAAGTTTTCCTTTTCCAAAACCATCTTCACACAGCAAAACAAATAAACTTCCTCACTGGCTGTACAAAAACAAAGCACCGGCTTTGCAGAATTGGACACACT]


>consensus_8534#0 TGTTGTTTTTTTTGGCCTAAGTTTATTTTAAAAGTAAAATAAATACTTTTGCTGTCAGAG TACACGATAAAATTTTCTCCTTTTCTTTCTCTCTTTCTCTCTTTCTATCTCTCTCTCTCT CTCTCGCTATCTCGCTATGCATCTCTTTCCCTATCTCTAACTCTATCTCTCTATCGATAG TATTAATCTGTTTTGTTGTTGTTGTTCTGAACTACACAAGAGACGTCCTCGCGACACATT TGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAA GAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCGTA GTAGTACGCAGCTGCACGGACTGGTGCAGCACGAGTAATGGAGGAAGAAAATAAGGGGAA AATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGTTAGAATG GGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCTGCTCCTT GGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACTAGCGCCA CCGCACTGTGTGCACACGTACCTATGTGTGTGTGTGTGTGTGTGTGTGTTTACGGGAACT ATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGGGGGGATG TTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAAGGGGCGC TGATTTTTGTTTGTTTCGTTTTCTCGTCGGTATGTTGTCTGTCTGTCTTGCTGTGGGACT AAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCTTCTCCCATACACA TCCATACGAATCACCGGGGTTTGCGTCCGATTATGTAGAAGGGGGGAAGGGGGCGGGGGG GATGGTTTGTGTGGAGATAAAGGATTTAGAAAGCGAACAGCAGCAGGAAAGCCATCATAA GACAGAACAGACCCATGGCTTCAGACAGGCGAAGCCCAGGATAGCGTACGAGAACAGCTG CTGCTTCAGCGACGGGTTTCTTGCGTAACCGATGATCAGCGACCCGAATACTGTTCCGAT ACCGGCACCAGATCCGGCAACACCGACGGTGGCAGCACCGGCTCCGATGAACTTGGCAGC GGAGTCAATGTCACGGGTGACCGGGGTAGTCTGGAATGACCGGACCTGTGGCAACAAAGC GACGGGCGCTGTTTTCTGGGCAGCGAGCGTCTGGCTCTGGGAGATGACGGCGCTGCTGGT CGGTGTAGCGTTACTCCACTTTCCGTCAGCACTTTGCGTGTGTTCTTGATGATGGTTTCC ATGTTTTCAGCAAAGTTTTCCTTTTCCAAAACCATCTTCACACAGCAAAACAAATAAACT TCCTCACTGGCTGTACAAAAACAAAGCACCGGCTTTGCAGAATTGGACACACT



consensusID : consensus_8534#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence
                              [AGGCAGAATCGGCACGTGGGCCGTACAATGCTACCCTCTCGATCCATCAGCTGGTGGAGAACACGGACGAGACGTACTGTATCGATAACGAGGCCCTGTACGATATCTGTTTCCGCACGCTGAAGGTGCCCAATCCGAGCTACGGCGATTTGAACCATCTCGTTTCGCTGACGATGTCCGGTGTGACCACCTGTCTGCGATTCCCGGGACAGCTGAATGCCGATCTGCGCAAGCTGGCCGTCAACATGGTGCCGTTCCCGCGTCTTCATTTCTTCATGCCCGGTTTCGCGTCCACGTGACGTCCCGTGGCGTCCCAGCAGTACCGTGCGCTCACCGTGGCCGGAGCTGACCCAAGCAGATGTTCGATGCCAAGGAAGCATGATGGCGGCTTGCGATCCACGCCATGGCCGCTACCTAACAGTCGNCTGCCGTGTTCCGTGGACGTAGTGGTCCAGTGAAGGAGGTCGNACGGAGCAGATGGCTGGCGGTTCAGAACANAGAANCGAGGCAGNGTAGTTCCGGNC]

[+] EMBL BX469876             [AGGCAGAATCGGCACGTGGGCCGTACAATGCTACCCTCTCGATCCATCAGCTGGTGGAGAACACGGACGAGACGTACTGTATCGATAACGAGGCCCTGTACGATATCTGTTTCCGCACGCTGAAGGTGCCCAATCCGAGCTACGGCGATTTGAACCATCTCGTTTCGCTGACGATGTCCGGTGTGACCACCTGTCTGCGATTCCCGGGACAGCTGAATGCCGATCTGCGCAAGCTGGCCGTCAACATGGTGCCGTTCCCGCGTCTTCATTTCTTCATGCCCGGTTTCGCGTCCACGTGACGTCCCGTGGCGTCCCAGCAGTACCGTGCGCTCACCGTGGCCGGAGCTGACCCAAGCAGATGTTCGATGCCAAGGAAGCATGATGGCGGCTTGCGATCCACGCCATGGCCGCTACCTAACAGTCGNCTGCCGTGTTCCGTGGACGTAGTGGTCCAGTGAAGGAGGTCGNACGGAGCAGATGGCTGGCGGTTCAGAACANAGAANCGAGGCAGNGTAGTTCCGGNC]


>consensus_8534#1 AGGCAGAATCGGCACGTGGGCCGTACAATGCTACCCTCTCGATCCATCAGCTGGTGGAGA ACACGGACGAGACGTACTGTATCGATAACGAGGCCCTGTACGATATCTGTTTCCGCACGC TGAAGGTGCCCAATCCGAGCTACGGCGATTTGAACCATCTCGTTTCGCTGACGATGTCCG GTGTGACCACCTGTCTGCGATTCCCGGGACAGCTGAATGCCGATCTGCGCAAGCTGGCCG TCAACATGGTGCCGTTCCCGCGTCTTCATTTCTTCATGCCCGGTTTCGCGTCCACGTGAC GTCCCGTGGCGTCCCAGCAGTACCGTGCGCTCACCGTGGCCGGAGCTGACCCAAGCAGAT GTTCGATGCCAAGGAAGCATGATGGCGGCTTGCGATCCACGCCATGGCCGCTACCTAACA GTCGNCTGCCGTGTTCCGTGGACGTAGTGGTCCAGTGAAGGAGGTCGNACGGAGCAGATG GCTGGCGGTTCAGAACANAGAANCGAGGCAGNGTAGTTCCGGNC



consensusID : consensus_8534#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 51
fasta sequence
                              [TACCTATCCAGGGTGAAGGTACCAGCAACATGACAATGGTGAACTGCGACT]

[+] EMBL BX627282             [TACCTATCCAGGGTGAAGGTACCAGCAACATGACAATGGTGAACTGCGACT]


>consensus_8534#2 TACCTATCCAGGGTGAAGGTACCAGCAACATGACAATGGTGAACTGCGACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8534#0      TGTTGTTTTTTTTGGCCTAAGTTTATTTTAAAAGTAAAATAAATACTTTTGCTGTCAGAG 60
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TACACGATAAAATTTTCTCCTTTTCTTTCTCTCTTTCTCTCTTTCTATCTCTCTCTCTCT 120
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      CTCTCGCTATCTCGCTATGCATCTCTTTCCCTATCTCTAACTCTATCTCTCTATCGATAG 180
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TATTAATCTGTTTTGTTGTTGTTGTTCTGAACTACACAAGAGACGTCCTCGCGACACATT 240
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TGTGTGCGAGCGAAACGGGACAGGTAGTGTAAGGACTGAAGCTATAAAGGAAACGCTGAA 300
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      -AGGCAGAATCGGCACGTGGGCCGTACAATGCTACCCTCTCGATCCATCAGCTGGTGGAG 59
                                                                                  

consensus_8534#0      GAGTGTGGAAGTACGGGGTGGTATGATCAGTTACAGTCTTACCACATTCGTCACCGCG-- 358
consensus_8534#2      --------------------------------------------TACCTATC-CAGGG-- 13
consensus_8534#1      AACACGGACGAGACGTACTGTATCGATAACGAGGCCCTGTACGATATCTGTTTCCGCACG 119
                                                                   *    *  * *    

consensus_8534#0      -TAGTAGTACGCAG-CTGCACGG-ACTGGT--GCAGCACGAGTAATGGAGGAAGAAAATA 413
consensus_8534#2      -TGAAGGTAC-CAG-CAACATGACAATGGT--GAACTGCGACT----------------- 51
consensus_8534#1      CTGAAGGTGCCCAATCCGAGCTACGGCGATTTGAACCATCTCGTTTCGCTGACGATGTCC 179
                       *    ** * **  *           * *  * *                         

consensus_8534#0      AGGGGAAAATCCGGACAGCAAGAGAGCAAAGTGAAGGTTGACATTTGGTGCAAAGAATGT 473
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      GGTGTGACCACCTGTCTGCGATTCCCGGGACAGCTGAATGCCGATCTGCGCAAGCTGGCC 239
                                                                                  

consensus_8534#0      TAGAATGGGCCAAGGAACTAGGCCACAACCAGCCGTCAGGGTTCTACGACCGTTTTGCCT 533
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      GTCAACATGGTGCCGTTCCCG--CGTCTTCATTTCTTCATGCCCGGTTTCGCGTCCACGT 297
                                                                                  

consensus_8534#0      GCTCCTTGGCGCTACTACGCTAGCACTATGCTCGATCGTCTGCCTTGCCCTGGCCTAACT 593
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      GACGTCCCGTGGCGTCCCAGCAGTACCGTGCGCTCACCGTGGCCGGAGCTGACCCAAGCA 357
                                                                                  

consensus_8534#0      AGCGCCACCGCACTGTGTGCACACGTACCTATGTGTGTGTGTGTGTGTGTGTGTGTTTAC 653
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      GATGTTCGATGCCAAGGAAGCATGATGGCGGCTTGCGATCCACGCCATGGCCGCTACCTA 417
                                                                                  

consensus_8534#0      GGGAACTATCTTAAAATCGACACTTTCTTCTGTTTTCGCACGAAAGAGAGCCCCTGTGGG 713
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ACAGTCGNCTGCCGTGTTCCGTGGACGTAGTGGTCCAGTGAAGGAGGTCGNACGGAGCAG 477
                                                                                  

consensus_8534#0      GGGGATGTTATGTTACACCAACACCCGCTATCCGGGGAGGGGTCTGCTGACCGGGGGCAA 773
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ATGGCTGGCGGTTCAGAACANAGAANCGAGGCAGNGTAGTTCCGGNC------------- 524
                                                                                  

consensus_8534#0      GGGGCGCTGATTTTTGTTTGTTTCGTTTTCTCGTCGGTATGTTGTCTGTCTGTCTTGCTG 833
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TGGGACTAAACAAGAGGATGTGGGGATCGTGTTTGTGTGTTGCTTCAGTTCGCTTCTCCC 893
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      ATACACATCCATACGAATCACCGGGGTTTGCGTCCGATTATGTAGAAGGGGGGAAGGGGG 953
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      CGGGGGGGATGGTTTGTGTGGAGATAAAGGATTTAGAAAGCGAACAGCAGCAGGAAAGCC 1013
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      ATCATAAGACAGAACAGACCCATGGCTTCAGACAGGCGAAGCCCAGGATAGCGTACGAGA 1073
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      ACAGCTGCTGCTTCAGCGACGGGTTTCTTGCGTAACCGATGATCAGCGACCCGAATACTG 1133
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TTCCGATACCGGCACCAGATCCGGCAACACCGACGGTGGCAGCACCGGCTCCGATGAACT 1193
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TGGCAGCGGAGTCAATGTCACGGGTGACCGGGGTAGTCTGGAATGACCGGACCTGTGGCA 1253
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      ACAAAGCGACGGGCGCTGTTTTCTGGGCAGCGAGCGTCTGGCTCTGGGAGATGACGGCGC 1313
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TGCTGGTCGGTGTAGCGTTACTCCACTTTCCGTCAGCACTTTGCGTGTGTTCTTGATGAT 1373
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      GGTTTCCATGTTTTCAGCAAAGTTTTCCTTTTCCAAAACCATCTTCACACAGCAAAACAA 1433
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  

consensus_8534#0      ATAAACTTCCTCACTGGCTGTACAAAAACAAAGCACCGGCTTTGCAGAATTGGACACACT 1493
consensus_8534#2      ------------------------------------------------------------
consensus_8534#1      ------------------------------------------------------------
                                                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)