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Anopheles gambiae
cluster # 8547 cluster # 8547       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8547#0 length = 1623 sequences # 4  
consensus_8547#1 length = 639 sequences # 4  
consensus_8547#2 length = 468 sequences # 1  
consensus_8547#3 length = 437 sequences # 1  
consensus_8547#4 length = 236 sequences # 1  

consensusID : consensus_8547#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1623
fasta sequence
                              [CCGCCCACGCGTCCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCAACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCGGCATTGCGCTGGAGACGCGCCGCATGGACATTTGTCGAGGCGTCCATCATGAAGGCGGACGACGTGCCCGGGTATGTTGGGCGTACGCGTTCCAGGTGACGATGGGCTTCATCCAGAACCGCGCCTTCCGCAACACGGTCCTGCGGTGCTTGGTTGAGCTGTACCGCAACGCGGGCGTGCCGGACTACGTCAACATGTGCCAGTGTTTGATCTTCCTCGAGGATCCGCTGGCCGTCGCCGAGGTGCTCGATGGACTCACCAAGGAGAGCGAATCGTCCGTGCTGATGGCGTACCAGATCGCTTTCGATCTGTACGAATCTGCCACCCAGCAGTACCTGGGCCAGGTGCTGCAAGCGCTGAAAGCAACCGCACCGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAACGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACGCTGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAACATCGAAAAGCTGGCCAGCATCCTGTCGGGCGAGGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCGACAATCTCGAAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCGCTCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCTACCTGCCGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGCTCGGTTTGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGAAGGACGCACAGAACGAGAACGTCCGTCACGGCGGCTGCCTGGGGCTTGGGCTGGCCGCGATGGGTACC]

[+] EMBL BM592308             [CCGCCCACGCGTCCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCAACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCGGCATTGCGCTGGAGACGCGCCGCATGGACATTTGTCGAGGCGTCCATCATGAAGGCGGACGACGTGCCCGGGTATGTTGGGCGTACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM637936             [                                                                              ccgGAATCAAGTAAAAGTCCCGTTACGAGCAGCCCGCACAGCAAACGG AAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAAGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCGCGCAACGAGTACGTGGACACGATCATTGCCAAGTGCATCGATCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGTCTCGAGGATGGGCAGTACAAGCAGGCGCTCGGCATTGCGCTGGAGACGCGCCGCATGGACA TTGTCGAGGCGTCCATCATGAAGGCGGACGACGTGCCC GGTATGTT GGCGTACGCGTTCCAGGTGACGATGGGCTTCATCCAGAACCGCGCCTTCCGCAACACGGTCCTGCGGTGCTTGGTTGAGCTGTACCGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM579604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccGGTGACGATGGGCTTCATCCAGAACCGCGCCTTCCGCAACACGGTCCTGCGGTGCTTGGTTGAGCTGTACCGCAACGCGGGCGTGCCGGACTACGTCAACATGTGCCAGTGTTTGATCTTCCTCGAGGATCCGCTGGCCGTCGCCGAGGTGCTCGATGGACTCACCAAGGAGAGCGAATCGTCCGTGCTGATGGCGTACCAGATCGCTTTCGATCTGTACGAATCTGCCACCCAGCAGTACCTGGGCCAGGTGCTGCAAGCGCTGAAAGCAACCGCACCGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAACGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACGCTGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAACATCGAAAAGCTGGCCAGCATCCTGTCGGGCGAGGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCGACAATCTCGAAATGGCTGGCGAGGG                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM582981             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAACGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACGCTGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAATATCGAAAAGCTGGCCAGCATTCTGTCGGGCGAGGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAAGAATCGGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCGACAATCTCG AATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCGCTCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCTACCTGCCGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGCTCGGTTTGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGAAGGACGCACAGAACGAGAACGTCCGTCACGGCGGCTGCCTGGGGCTTGGGCTGGCCGCGATGGGTACC]


>consensus_8547#0 CCGCCCACGCGTCCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGT AGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGC AAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATG AACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGT TTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCT TCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGT TCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCA ACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGG CCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGG CGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCG GCATTGCGCTGGAGACGCGCCGCATGGACATTTGTCGAGGCGTCCATCATGAAGGCGGAC GACGTGCCCGGGTATGTTGGGCGTACGCGTTCCAGGTGACGATGGGCTTCATCCAGAACC GCGCCTTCCGCAACACGGTCCTGCGGTGCTTGGTTGAGCTGTACCGCAACGCGGGCGTGC CGGACTACGTCAACATGTGCCAGTGTTTGATCTTCCTCGAGGATCCGCTGGCCGTCGCCG AGGTGCTCGATGGACTCACCAAGGAGAGCGAATCGTCCGTGCTGATGGCGTACCAGATCG CTTTCGATCTGTACGAATCTGCCACCCAGCAGTACCTGGGCCAGGTGCTGCAAGCGCTGA AAGCAACCGCACCGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAA CGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACGC TGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAACATCGAAAAGCTGGCCAGCA TCCTGTCGGGCGAGGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATG CCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGG CCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCG ACAATCTCGAAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCG CTCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCTACCTG CCGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGCTCGGT TTGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGAAGGAC GCACAGAACGAGAACGTCCGTCACGGCGGCTGCCTGGGGCTTGGGCTGGCCGCGATGGGT ACC



consensusID : consensus_8547#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 639
fasta sequence
                              [CCGCTCCATTGTAAGCAATTTTGTGAAAGTCATCAACAGCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCAACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCGGCATTGCGCTGGA]

[+] EMBL BM577457             [CCGCTCCATTGTAAGCAATTTTGTGAAAGTCATCAACAGCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCAACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCGGCATTGCGCTG  ]
[+] EMBL BM599175             [  gcgtccgTGTAAGCAATTTTGTGAAAGTCATCAACAGCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGC                                                                                                                                                                                                  ]
[+] EMBL BM583920             [                              ccgCAACAGCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCAACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGG                   ]
[+] EMBL BM613302             [                                 ccgCAGCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCAACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCGGCATTGCGCTGGA]


>consensus_8547#1 CCGCTCCATTGTAAGCAATTTTGTGAAAGTCATCAACAGCGCTCTCTCGGCGTATCATTG CGTGTGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAA GTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGC CGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAA CAAGCTGAACATGATTGTGGGCGAGTTTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGAT CGAAATGCTGCACGAGGACAAAAGCTTCTCCCATCACGAGCTGGCGGCACTGGTGGCCTC CAAGGTGTACTACCATCTCGGTTCGTTCGAGGACTCGCTCACGTACGCCCTGGGCGCGGG CGACCTGTTCGACGTGAATGCACGCAACGAGTACGTGGACACGATCATTGCCAAGTGCAT CGACCACTACACCCAGCTGCGGGTGGCCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGC GAAACCGATCGACGCGCGGCTGGAGGCGATCGTAAACCGGATGATTCAGCGCTGCCTCGA GGATGGGCAGTACAAGCAGGCGCTCGGCATTGCGCTGGA



consensusID : consensus_8547#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 468
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGAGCAACCGCACCGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAACGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACACTGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAATATCGAAAAGCTGGCCAGCATTCTGTCGGGCGAGGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCGACAATCTCGAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCGCTCGGTGTCATTCACCGGGGACA]

[+] EMBL BM604036             [CCGCCCACGCGTCCGCCCACGCGTCCGAGCAACCGCACCGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAACGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACACTGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAATATCGAAAAGCTGGCCAGCATTCTGTCGGGCGAGGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCGACAATCTCGAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCGCTCGGTGTCATTCACCGGGGACA]


>consensus_8547#2 CCGCCCACGCGTCCGCCCACGCGTCCGAGCAACCGCACCGATCCCGTCGGCCCTGATTTC GAACTTCAAACCGCAAGGCACTACAACGACCGACGCCACTGCCACCACTGCCACCGAGGC CACCGAACCGAAGGCGGAACGTACACTGGAAAGCTTGAACGAGGCGGAAAAAACTCACCA GAAAAATATCGAAAAGCTGGCCAGCATTCTGTCGGGCGAGGTGACGATCGAGCTGCAGCT CCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAGGAATC GGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGG CACCACGAGCGATCAGTTTTTGCGCGACAATCTCGAATGGCTGGCGAGGGCAACGAACTG GGCGAAGCTCACGGCGACCGCCTCGCTCGGTGTCATTCACCGGGGACA



consensusID : consensus_8547#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence
                              [CCGCCCACGCGTCCGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCGACAATCTCGAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCGCTCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCTACCTGCCGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGCTCGGTTTGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGAAGGACGCACAGAACGAGAACGTC]

[+] EMBL BM649032             [CCGCCCACGCGTCCGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATGCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCGACAATCTCGAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCGCTCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCTACCTGCCGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGCTCGGTTTGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGAAGGACGCACAGAACGAGAACGTC]


>consensus_8547#3 CCGCCCACGCGTCCGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCATG CCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCGGCTGTCGATCTGCCACACGG CCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCGCG ACAATCTCGAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCGCCTCGC TCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCTACCTGC CGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGCTCGGTT TGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGAAGGACG CACAGAACGAGAACGTC



consensusID : consensus_8547#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence
                              [TCCGCCCACGCATCCGGAAAGTCATCAACAGCGCTCTCTCGGCGTATCATTGCGTGCGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAG]

[+] EMBL BM644713             [TCCGCCCACGCATCCGGAAAGTCATCAACAGCGCTCTCTCGGCGTATCATTGCGTGCGTTATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAG]


>consensus_8547#4 TCCGCCCACGCATCCGGAAAGTCATCAACAGCGCTCTCTCGGCGTATCATTGCGTGCGTT ATTTCCTAAACTAGTGGTAGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTC CCGAGCAGCCCGCACAGCAAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCA TCATCTGCCTGCTGGATGAACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      CCGCCCACGCGTCCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGT 60
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      AGCGCGCGAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGC 120
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      AAACGGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGATG 180
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      AACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGT 240
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      TTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCT 300
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      TCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGT 360
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      TCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCA 420
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      ACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGG 480
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      CCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGG 540
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      CGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCG 600
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      GCATTGCGCTGGAGACGCGCCGCATGGACATTTGTCGAGGCGTCCATCATGAAGGCGGAC 660
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      GACGTGCCCGGGTATGTTGGGCGTACGCGTTCCAGGTGACGATGGGCTTCATCCAGAACC 720
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      GCGCCTTCCGCAACACGGTCCTGCGGTGCTTGGTTGAGCTGTACCGCAACGCGGGCGTGC 780
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      CGGACTACGTCAACATGTGCCAGTGTTTGATCTTCCTCGAGGATCCGCTGGCCGTCGCCG 840
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      AGGTGCTCGATGGACTCACCAAGGAGAGCGAATCGTCCGTGCTGATGGCGTACCAGATCG 900
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ----------------------------------CCGCCCACGCGTCCGCCCACGCGTCC 26
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      CTTTCGATCTGTACGAATCTGCCACCCAGCAGTACCTGGGCCAGGTGCTGCAAGCGCTGA 960
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      GAGCAACCGCACCGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAA 86
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      AAGCAACCGCACCGATCCCGTCGGCCCTGATTTCGAACTTCAAACCGCAAGGCACTACAA 1020
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      CGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACAC 146
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      CGACCGACGCCACTGCCACCACTGCCACCGAGGCCACCGAACCGAAGGCGGAACGTACGC 1080
consensus_8547#1      ------------------------------------------------------------
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      TGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAATATCGAAAAGCTGGCCAGCA 206
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      TGGAAAGCTTGAACGAGGCGGAAAAAACTCACCAGAAAAACATCGAAAAGCTGGCCAGCA 1140
consensus_8547#1      -----------------------------CCGCTCCATTGTAAGCAATTTTGTGAAAGTC 31
consensus_8547#4      ---------------------------------TCCGCC-CACGCA---TCCGGAAAGTC 23
                                                                                  

consensus_8547#2      TTCTGTCGGGCGAG-GTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCAT 265
consensus_8547#3      -CCGCCCACGCGTCCGTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCAT 59
consensus_8547#0      TCCTGTCGGGCGAG-GTGACGATCGAGCTGCAGCTCCAGTTCCTCATCCGCAGCAACCAT 1199
consensus_8547#1      ATCAACAGCGCTCTCTCGGCGTATCATTGCGTGTGTTATTTCCTAAACTAGTGGTAGCGC 91
consensus_8547#4      ATCAACAGCGCTCTCTCGGCGTATCATTGCGTGCGTTATTTCCTAAACTAGTGGTAGCGC 83
                        *      **      * **    *      *    * ***** * *    *  * *  

consensus_8547#2      GCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCG-GCTGTCGATCTGCCACAC 324
consensus_8547#3      GCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCG-GCTGTCGATCTGCCACAC 118
consensus_8547#0      GCCGATCTGCAGATCCTGCGCGCGACGAAGGAATCGGTCCG-GCTGTCGATCTGCCACAC 1258
consensus_8547#1      GC-GAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAAC 150
consensus_8547#4      GC-GAGCAGATAATAGTGAATCAAGTAAAAGTCCCGTCCCGAGCAGCCCGCACAGCAAAC 142
                      ** ** * *   **  **         ** *   **  *** ** * *       ** **

consensus_8547#2      GGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCG 384
consensus_8547#3      GGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCG 178
consensus_8547#0      GGCCACGGTCATCGCGAACACGTTCATGCACAGCGGCACCACGAGCGATCAGTTTTTGCG 1318
consensus_8547#1      GGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGAT----G 206
consensus_8547#4      GGAAAAAACAATGGTGAACATCACCTCGGCCGCCGGCATCATCTGCCTGCTGGAT----G 198
                      **  *     ** * *****    *  *  *  ***** **   **   * *  *    *

consensus_8547#2      CGACAATCTCGAA-TGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCG--- 440
consensus_8547#3      CGACAATCTCGAA-TGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCG--- 234
consensus_8547#0      CGACAATCTCGAAATGGCTGGCGAGGGCAACGAACTGGGCGAAGCTCACGGCGACCG--- 1375
consensus_8547#1      AACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAGCTGAACATGATTGTGGGCGAGT 266
consensus_8547#4      AACCGGTCACGGAGCTAAAGGTATTTGCGCTGAACAAG---------------------- 236
                         *  ** ** *      **     **   ****  *                      

consensus_8547#2      CCTCGCTCGGTGTCATTCACCGGGGACA-------------------------------- 468
consensus_8547#3      CCTCGCTCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCT 294
consensus_8547#0      CCTCGCTCGGTGTCATTCACCGGGGACACGAGACCGATTCGCTCGCGCTGATGCAAAGCT 1435
consensus_8547#1      TTTGGCCGGAAATCTCGGAGGCGGCCGAAAAGATCGAAATGCTGCACGAGGACAAAAGCT 326
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ACCTGCCGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGC 354
consensus_8547#0      ACCTGCCGAAGGAGAGCGGCCCAAGCTCGGGCTACTCGGAGGGCGGCGGTCTGTACGCGC 1495
consensus_8547#1      TCTCCCATCACGAGCTGGCGGCACTGGTGGCCTCCAAGGTGTACTACCATCTCGGTTCGT 386
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      TCGGTTTGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGA 414
consensus_8547#0      TCGGTTTGATCCACGCGAACCATGGCGCCAACATCATCGACTATCTGCTGCAGCAGCTGA 1555
consensus_8547#1      TCGAGGACTCGCTCACGTACGCCCTGGGCGCGGGCGACCTGTTCGACGTGAATGCACGCA 446
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      AGGACGCACAGAACGAGAACGTC------------------------------------- 437
consensus_8547#0      AGGACGCACAGAACGAGAACGTCCGTCACGGCGGCTGCCTGGGGCTTGGGCTGGCCGCGA 1615
consensus_8547#1      ACGAGTACGTGGACACGATCATTGCCAAGTGCATCGACCACTACACCCAGCTGCGGGTGG 506
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      TGGGTACC---------------------------------------------------- 1623
consensus_8547#1      CCCTGGTGGAGGCGGAGGAGAACAACCTGGTCGCGAAACCGATCGACGCGCGGCTGGAGG 566
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      ------------------------------------------------------------
consensus_8547#3      ------------------------------------------------------------
consensus_8547#0      ------------------------------------------------------------
consensus_8547#1      CGATCGTAAACCGGATGATTCAGCGCTGCCTCGAGGATGGGCAGTACAAGCAGGCGCTCG 626
consensus_8547#4      ------------------------------------------------------------
                                                                                  

consensus_8547#2      -------------
consensus_8547#3      -------------
consensus_8547#0      -------------
consensus_8547#1      GCATTGCGCTGGA 639
consensus_8547#4      -------------
                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)