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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8649#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1100 fasta sequence
[CCGCCCACGCGTCCGGATCGCTCATATATTTTCGGAACCACGACGATAGATAAGAGATAAGCGACCGTGATCGTGCGTTGGCAATTCGAATTCAGTTTTGTGGGGTGCATTTGAGAAGCGCAGCAGCATTCGCCGCAAGGTAAACGCGTAGTAGTAGTTGACGCAAAAGACGCGCAGCACAGAAACGATGGCCGATGAAGACAAAGGACTGGTCGCTGGACACCCCCCGGCAGTGAAAGCGGGTGGAATGCGCATTGTGCAGCATAAGACTCCGAACAGCGAGCGGCCTGCCAAGGATCCGGTCGAGGTCATTGGGCTCTCGAACCCAGCGCCCAACGTGAACACGGGTGAGGTCGCCCAGTCCGGGACGAGCACCAAGCATACCGACCATTCCGTGGAGGCGTCGCAGGTGGCCCATGCCCAGAAGCCGCCGGCACCGGTCCACAGCAAGCCCGTCAATCACATCCAGCAGCCTCGGAAGTGAATTACTCGCGGTGCATGCTATTGAACCAGTGGCGGGGGTGCGGAGTGGAAGACGGACGGAAATGAACCATCAGCAGCAAACGACGAAGA-GTTGGGGGTGGTCAA-GGGGACAAGGGTGTCCGCCGGATGCACATGCACATTGGCAGGTCCAATTCTCCTCGCCTCCGCCGGTTGATTTGCCCTGCTGGAACGTTTTCGGAGTCCCTGTTCGGCGAGTGTTTTTTCAAGTTTCTTCTTCCTTTTTTCTTCTCACCATCATCGGTAGATTGATAATTGTCTGAATTTAGAGCGTTGCTTAGCGCGCACACGTTGTTTTTCTTACCTTCAATTTACACGGAACTTACACGGGAGCGCGGTGGTGTGCCTCATCGAATTGGAGGCGTTGTAACATTTCTAGTGGTCTTGGGTTTGTTTTCCTTTTCAAATTAATAATCCTACTAATATTTTGTAATACTGTTTGTGTACTATCAGAGAGCAAGAAAGGGAAGTAAAAAAGCTGTGCTTTCAGTTAGCGGGCTAGTTGGTAGATTGGAAGAAAATAAATGATACAAATAAGTGAAGCATGTTTAAAAAAGGTGGAAACAAAATATATTGAAGGGCGCATAATTTTAGAGCAA]
[+] EMBL BM655473 [CCGCCCACGCGTCCGGATCGCTCATATATTTTCGGAACCACGACGATAGATAAGAGATAAGCGACCGTGATCGTGCGTTGGCAATTCGAATTCAGTTTTGTGGGGTGCATTTGAGAAGCGCAGCAGCATTCGCCGCAAGGTAAACGCGTAGTAGTAGTTGACGCAAAAGACGCGCAGCACAGAAACGATGGCCGATGAAGACAAAGGACTGGTCGCTGGACACCCCCCGGCAGTGAAAGCGGGTGGAATGCGCATTGTGCAGCATAAGACTCCGAACAGCGAGCGGCCTGCCAAGGATCCGGTCGAGGTCATTGGGCTCTCGAACCCAGCGCCCAACGTGAACACGGGTGAGGTCGCCCAGTCCGGGACGAGCACCAAGCATACCGACCATTCCGTGGAGGCGTCGCAGGTGGCCCATGCCCAGAAGCCGCCGGCACCGGTCCACAGCAAGCCCGTCAATCACATCCAGCAGCCTCGGAAGTGAATTACTCGCGGTGCATGCTATTGAACCAGTGGCGGGGGTGCGGAGTGGAAGACGGACGGAAATGAACCATCAGCAGCAAACGACGAAGAGGTTGGGGGTGGTCAAGGGGGACAAGGGTGTCCGCCGGATGCACATGCACATTGGCAGGTCCAATTCTCCTCGCCTCC ]
[+] EMBL CNS095QD [ GCAAAGTAAACGCGTAGTAGTAGTTGACGCAAAAGACGCGCAGATCAGAAACGATGGCCGATGAAGACAAAGGACTGGTCGCTGGACACCCCCCGGCAGTGAAAGCGGGTGGAATGCGCATTGTGCAGCATAAGACTCCGAACAGCGAGCGGCCTGCCAAGGATCCGGTCGAGGTCATTGGGCTCTCGAACCCAGCGCCCAACGTGAACACGGGTGAGGTCGCCCAGTCCGGGACGAGCACCAAGCATACCGACCATTCCGTGGAGGCGTCGCAGGTGGCCCATGCCCAGAAGCCGCCGGCACCGGTCCACAGCAAGCCCGTCAATCACATCCAGCAGCCTCGGAAGTGAATTACTCGCGGTGCATACTATTGAACCAGTGGCGGGGGTGCGGAGTGGAAGACGGACGGAAATGAACCATCAGCAGCAAACGACGAAGA GTTGGGGGTGGTCAA GGGGACAAGGGTGTCCGCCGGATGCACATGCACATTGGCAGGTCCAATTCTCCTCGCCTCCGCCGGTTGATTTGCCCTGCTGGAACGTTTTCGGAGTCCCTGTTCGGCGAGTGTTTTTTCAAGTTTCTTCTTCCTTTTTTCTTCTCACCATCATCGGTAGATTGATAATTGTCTGAATTTAGAGCGTTGCTTAGCGCGCACACGTTGTTTTTCTTACCTTCAATTTACACGGAACTTACACGGGAGCGCGGTGGTGTGCCTCATCGAATTGGAGGCGTTGTAACATTTCTAGTGGTCTTGGGTTTGTTTTCCTTTTCAAATTAATAATCCTACTAATATTTTGTAATACTGTTTGTGTACTATCAGAGAGCAAGAAAGGGAAGTAAAAAAGCTGTGCTTTCAGTTAGCGGGCTAGTTGGTAGATTGGAAGAAAATAAATGATACAAATAAGTGAAGCATGTTTAAAAAAGGTGGAAACAAAATATATTGAAGGGCGCATAATTTTAGAGCAA]
[-] EMBL CNS095QE [ CGATGAAGAAAAAGGACTGGTCGCTGGACACCCCCCGGCAGTGAAAGCGGGTGGAATGCGCATTGTGCAGCATAAGACTCCGAACAGCGAGCGGCCTGCCAAGGATCCGGTCGAGGTCATTGGGCTCTCGAACCCAGCGCCCAACGTGAACACGGGTGAGGTCGCCCAGTCCGGGACGAGCACCAAGCATACCGACCATTCCGTGGAGGCGTCGCAGGTGGCCCATGCCCAGAAGCCGCCGGCACCGGTCCACAGCAAGCCCGTCAATCACATCCAGCAGCCTCGGAAGTGAATTACTCGCGGTGCATGCTATTGAACCAGTGGCGGGGGTGCGGAGTGGAAGACGGACGGAAATGAACCATCAGCAGCAAACGACGAAGA GTTGGGGGTGGTCAA GGGGACAAGGGTGTCCGCCGGATGCACATGCACATTGGCAGGTCCAATTCTCCTCGCCTCCGCCGGTTGATTTGCCCTGCTGGAACGTTTTCGGAGTCCCTGTTCGGCGAGTGTTTTTTCAAGTTTCTTCTTCCTTTTTTCTTCTCACCATCATCGGTAGATTGATAATTGTCTGAATTTAGAGCGTTGCTTAGCGCGCACACGTTGTTTTTCTTACCTTCAATTTACACGGAACTTACACGGGAGCGCGGTGGTGTGCCTCATCGAATTGGAGGCGTTGTAACATTTCTAGTGGTCTTGGGTTTGTTTTCCTTTTCAAATTAATAATCCTACTAATATTTTGTAATACTGTTTGTGTACTATCAGAGAGCAAGAAAGGGAAGTAAAAAAGCTGTGCTTTCAGTTAGCGGGCTAGTTGGTAGATTGGAAGAAAATAAATGATACAAATAAGTGAAGCATGTTTAAAAAAGGTGGAAACAAAATATATTGAAGGGCGCAT ]
consensusID : consensus_8649#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 984 fasta sequence
[GCTATTGGATCATTTAG-TGCTAAACATTCACCAGCGGAGGTGCCCAGTCCTAGCAAGGGGAAGCAACACTGCCATAAAGGAGAAGCTTCGAAACGCATTTCGTGTACAGTTGATTGAGTGATTTTAATCCCAAAAAAGAAAGATTATGGCAGAAGAAAACAAAAATGGAGCAGCACCGGCAAC-GAAGTGGAACCGCAAGATGCGCCCGAAGAGCAAAAG-G-CTGCATCCGAGGAGGCAGCACCACCATCCGATGTTGAATCGGAACCAGAGCAGGAGCCTCAAA-TTTCAACTTTCGAACGGTTGAAACTATTCCTGGCGGAAACGAACAAGTTCCTGTTAATGTACGACGATCTGGTGGAGAACAAGGACAAGCACAAGAGCGTCTTCCTGTGTGCAGTGAACGAGCTGCGCGAGCGGCTGGTAACGTTGCTCCAACGGTACATCCTGCACACGATGGTCAAGGAGGATTTCCTGTACAAGCACATTGTGTGCTGCGGCGGAGAGGATGCGGAGGCAATTAATACGGAAGAATTCGAAGAGCACTATCAGGAAGTTCACAGCGAGGCAGACAAGGCTATTTCCTTGCCAGAGCTTGACGAGATTCGTGCGTACTCGGCCGAAGTCAAGACGTACATCGAGCTAGGCAAAGCGATGAACAACGATCTGATCTTCTCCCTGAAGCGACTACTGCGAAAGAGCAATTCCGTGCTGGCGGGACATCTGGGATAAGATGAGCAGTCATCGACTGAGGGGTTTTAGGGACTCTTCAAACACCACTCAACACAAAAACACTCAACTAGCTCTTAAGCAACAGTAAAATACAAATCTACACTAACCCAGGCCATCAGTACTAATTCCCGCCATTCTGCCAGCAGGATGACGATCAGTTTAGATCATTAACTTGTCATGTGCTTAACGCCAAAATGGATAAAATAAATGTTACCCCTGAAACAAAAAAAAAAAAAAAAAAAAAGGCCACATGTG]
[+] EMBL CNS09PB3 [GCTATTGGATCATTTAG TGCTAAACATTCACCAGCGGAGGTGCCCAGTCCTAGCAAGGGGAAGCAACACTGCCATAAAGGAGAAGCTTCGAAACGCATTTCGTGTACAGTTGATTGAGTGATTTTAATCCCAAAAAAGAAAGATTATGGCAGAAGAAAACAAAAATGGAGCAGCACCGGCAAC GAAGTGGAACCGCAAGATGCGCCCGAAGAGCAAAAG G CTGCATCCGAGGAGGCAGCACCACCATCCGATGTTGAATCGGAACCAGAGCAGGAGCCTCAAA TTTCAACTTTCGAACGGTTGAAACTATTCCTGGCGGAAACGAACAAGTTCCTGTTAATGTACGACGATCTGGTGGAGAACAAGGACAAGCACAAGAGCGTCTTCCTGTGTGCAGTGAACGAGCTGCGCGAGCGGCTGGTAACGTTGCTCCAACGGTACATCCTGCACACGATGGTCAAGGAGGATTTCCTGTACAAGCACATTGTGTGCTGCGGCGGAGAGGATGCGGAGGCAATTAATACGGAAGAATTCGAAGAGCACTATCAGGAAGTTCACAGCGAGGCAGACAAGGCTATTTCCTTGCCAGAGCTTGACGAGATTCGTGCGTACTCGGCCGAAGTCAAGACGTACATCGAGCTAGGCAAAGCGATGAACAACGATCTGATCTTCTCCCTGAAGCGACTACTGCGAAAGAGCAATTCCGTGCTGGCGGGACATCTGGGATAAGATGAGCAGTCATCGACTGAGGGGTTTTAGGGACTCTTCAAACACCACTCAACACAAAAACACTCAACTAGCTCTTAAGCAACAGTAAAATACAAATCTACACTAACCCAGGCCATCAGTACTAATTCCCGCCATTCTGCCAGCAGGATGACGATCAGTTTAGATCATTAACTTGTCATGTGCTTAACGCCAAAATGGATAAAATAAATGTTACCCCTGAAACAAAAAAAAAAAAAAAAAAAAAGGCCACATGTG]
[+] EMBL CNS096IW [ TGGAT TTTAGCTGCTAAACATTCACCAGCGGAGGTGCCCAGTCCTAGCAAGGGGAAGCAACACTGCCATAAAGGAGAAGCTTCGAAACGCATTTCGTGTACAGTTGATTGAGTGATTTTAATCCCAAAAAAGAAAGATTATGGCAGAAGAAAACAAAAATGGAGCAGCACCGGCAACGGAAGTGGAACCGCAAGATGCGCCCGAAGAGCAAAAGCGCCCCCCCCCGAGGAGGCAGCACCACCATCCGATGTTGAATCGGAACCAGAGCAGGAGCCTCAAATTTTCAACTTTCGAACGGTTGAAACTATTCCTGGCGGAAACGAACAAGTTCCTGTTAATGTACGACGATCTGGTGGAGAACAAGGACAAGCACAAGAGCGTCTTCCTGTGTGCAGTGAACGAGCTGCGCGAGCGGCTGGTAACGTTGCTCCAACGGTACATCCTGCACACGATGGTCAAGGAGGATTTCCTGTACAAGCACATTGTGTGCTGCGGCGGAGAGGATGCGGAGGCAATTAATACGGAAGAATTCGAAGAGCACTATCAGGAAGTTCACAGCGAGGCAGACAAGGCTATTTCCTTGCCAGAGCTTGACGAGATTCGTGCGTACTCGGCCGAAGTCAAGACGTACATCGAGCTAGGCAAAGCGATGAACAACGATCTGATCTTCTCCCTGAAGCGACTACTGCGAAAGAGCAATTCCGTGCTGGCGGGACATCTGGGATAAGATGAGCAGTCATCGACTGAGGGGTTTTAGGGACTCTTCAAACACCACTCAACACAA ]
consensusID : consensus_8649#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 926 fasta sequence
[AAATCGTAAGCCGCAGTAGTTAGCTGTTGTCGCCCGAGAGTGTTCGCAGAGCCCAGCAGAGCGTCACCCGAGAAAGCAGCAGCAGCAGCAGCAGCCAGTGGAGAAATGCAGCGTGGGATTTAATGGAGTGGAGGAGACAAGAGCGAGAGGAGGATGATGATGATGATGATGATGATGAAAAGAAAGGAAGTGGAAAAGAGCTACATACAACAACAAAAACGCAACGTAAAAGAGCAAGAAACCATACAGAAAAGAGTAAAGCTAACGAGAGATAAACATTAAATAAGAAAACTCTTAAGCATAACACAGAAGTAAGCAGTATACAACAACAAACATGATGGAAACAAATTGAAAACACTACCTAAGCATAGCAAATCAACAAACAGCTTTTTGATAACATCTCTCCAACCGATATGAAAGATAGCATCAAAAAGCGCTGCCCGAAAATAACATCAGCAAGCAAAATAATAGCAAAACAGCAGCTATAATATTTTAACAACTTTCAACAGCAGTAACAACAGCAGCAGCAAAAATAAACAACAACAACAGCAACAGCCATAATAATATTTAAAAACAAAGCTTCTTCATCACCACCACCACCACCCACCCACTACCATCACATTGAGACACAACAACACAACAACTCTCTCTTCCCACGCAGACGAAAGAAAGAGAAACAAGTGTTTGCGTGTGTCTCTCAGCAAAGCATTTGCGTGTGTTCCTCCTAACACCACGAGCACGAATTTGTTCAACAGCCCGACACCAAAGGAAAGCGTTCAGCTAACAGCAGCAGCAGCAAACTCAGCGGCGGCGGCGGCATCAGCAGCAGCAGCGCAAACAGCAAAAGCGGCGGAGGCGGCATCAGCAGCAGCAGCATCAGCAGCAGTAGCAGCAGCGCAGATAGCAGCTTATCCTTTTATCCTAGT]
[+] EMBL BX604854 [AAATCGTAAGCCGCAGTAGTTAGCTGTTGTCGCCCGAGAGTGTTCGCAGAGCCCAGCAGAGCGTCACCCGAGAAAGCAGCAGCAGCAGCAGCAGCCAGTGGAGAAATGCAGCGTGGGATTTAATGGAGTGGAGGAGACAAGAGCGAGAGGAGGATGATGATGATGATGATGATGATGAAAAGAAAGGAAGTGGAAAAGAGCTACATACAACAACAAAAACGCAACGTAAAAGAGCAAGAAACCATACAGAAAAGAGTAAAGCTAACGAGAGATAAACATTAAATAAGAAAACTCTTAAGCATAACACAGAAGTAAGCAGTATACAACAACAAACATGATGGAAACAAATTGAAAACACTACCTAAGCATAGCAAATCAACAAACAGCTTTTTGATAACATCTCTCCAACCGATATGAAAGATAGCATCAAAAAGCGCTGCCCGAAAATAACATCAGCAAGCAAAATAATAGCAAAACAGCAGCTATAATATTTTAACAACTTTCAACAGCAGTAA ]
[+] EMBL BM644863 [ ccgATAACACAGCAGTAAGCAGTATACAACAACAAACATGATGGAAACAAATTGAAAACACTACCTAAGCATAGCAAATCAACAAACAGCTTTTTGATAATATCT CAACCGATAAGAAAGATAGCATCAAAAAGCGCTGCCCGAAAATAACATCTGCAAGCAAAATAATAGCAAAACAGCAGCTATAATATTTTAACAACTTTCAACAGCAGTAACAACAGCAGCAGCAAAAATAAACAACAACAACAGCAACAGCCATAATAATATTTAAAAACAAAGCTTCTTCATCACCACCACCACCACCCACCCACTACCATCACATTGAGACACAACAACACAACAACTCTCTCTTCCCACGCAGACGAAAGAAAGAGAAACAAGTGTTTGCGTGTGTCTCTCAGCAAAGCATTTGCGTGTGTTCCTCCTAACACCACGAGCACGAATTTGTTCAACAGCCCGACACCAAAGGAAAGCGTTCAGCTAACAGCAGCAGCAGCAAACTCAGCGGCGGCGGCGGCATCAGCAGCAGCAGCGCAAACAGCAAAAGCGGCGGAGGCGGCATCAGCAGCAGCAGCATCAGCAGCAGTAGCAGCAGCGCAGATAGCAGCTTATCCTTTTATCCTAGT]
consensusID : consensus_8649#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 854 fasta sequence
[TTTTTTGTTGTCGTTTCGTTGCCAAAACGAGTAGCAATTTTATTGCTTGCCTTCCCCTAGAGTCGGGCAATGATCGAGCAGCAGCAGCAAATGACGCACCAGCGCCTTTGCACGTCAATTAAGATGCGAGGAGAAAATCCTTACATCTCGATGACACGCTGACCGGTCTTGTTGGTCTTGTCGAGGAAGTCGGCGAACTCCTGGTACGGGGTCTTGTTCAGCGGCAGAACCTTCCACAAGTCCGGCGTCAGGAAGGCGTACGTCTTGGCAATGGCGGCGTACGTGGCCTTCGCGAAGTTACCGAGCGTGGTCGTGGAACCACGGGTGGTGATATAGCAATCGTCAATACCAGCCATCTGCAGCAGCTTCTTCGGAACCGGGGCAGAAACGATGCCGGTACCACGCGGACCGGAATCAGACGCACCAGAACGGAACCGCACTTGCCGCTGACCTTGCACGGTACGGTGTGAGGGCGACCGATCTTGTTACCCCAGTAGCCACGACGCACCGGGACAACCGACAGCTTGGCCAGGATGATGGCACCACGGATGGCGGTGGCCACTTCCTTGCTGCACTTCACACCCAGACCGATGTGACCGTTGCTGTCGCCGATGGCAACGAACGCCTTGAAGCGGGTACGCTGACCGGCACGGTTCTGCTTCTGGACGGGCATGATCTTCAGCACCTCATCCTTCAGCAGACGGTTCAGGAAGAAATCGATGATCTCGAACTCTTTGATCGGGAGCGAGTTCAGATAGATTTCCTCCAGCGTGCGGATCTTGCCGTCCTTTTTTTTTTTTGGAAACTTCGTCACCGGCACCCATTCCTTCGAGTCCCCCTTGCCGCCGCGTCCG]
[+] EMBL CNS08L24 [TTTTTTGTTGTCGTTTCGTTGCCAAAACGAGTAGCAATTTTATTGCTTGCCTTCCCCTAGAGTCGGGCAATGATCGAGCAGCAGCAGCAAATGACGCACCAGCGCCTTTGCACGTCAATTAAGATGCGAGGAGAAAATCCTTACATCTCGATGACACGCTGACCGGTCTTGTTGGTCTTGTCGAGGAAGTCGGCGAACTCCTGGTACGGGGTCTTGTTCAGCGGCAGAACCTTCCACAAGTCCGGCGTCAGGAAGGCGTACGTCTTGGCAATGGCGGCGTACGTGGCCTTCGCGAAGTTACCGAGCGTGGTCGTGGAACCACGGGTGGTGATATAGCAATCGTCAATACCAGCCATCTGCAGCAGCTTCTTCGGAACCGGGGCAGAAACGATGCCGGTACCACGCGGACCGGAATCAGACGCACCAGAACGGAACCGCACTTGCCGCTGACCTTGCACGGTACGGTGTGAGGGCGACCGATCTTGTTACCCCAGTAGCCACGACGCACCGGGACAACCGACAGCTTGGCCAGGATGATGGCACCACGGATGGCGGTGGCCACTTCCTTGCTGCACTTCACACCCAGACCGATGTGACCGTTGCTGTCGCCGATGGCAACGAACGCCTTGAAGCGGGTACGCTGACCGGCACGGTTCTGCTTCTGGACGGGCATGATCTTCAGCACCTCATCCTTCAGCAGACGGTTCAGGAAGAAATCGATGATCTCGAACTCTTTGATCGGGAGCGAGTTCAGATAGATTTCCTCCAGCGTGCGGATCTTGCCGTCCTTTTTTTTTTTTGGAAACTTCGTCACCGGCACCCATTCCTTCGAGTCCCCCTTGCCGCCGCGTCCG]
consensusID : consensus_8649#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence
[GAACGGGTCGGCAATGAACCCCCACACCTCCCCACCGAAATGCGCACCCACACATGCAGGCATAAAGTGAGTTTGGGCACACACATGTGGACATGCGGGGTGGGTTTTATCGTCGAGCAGATGGGTCCCGCACGGGTGTAACTGTCGACACGCGCGCAACAAACTTTTGATTGCAGAAAGGACCTCTCGCACTAGCTGTGTGTGTTTTTGGGTGCACACGCACACGCACACCCACACACACATGCACACTTTTGACCTTAAGTTGTTAGAAGGCTGAATGTTGGATGCGAAACGCTGGGTTTAGTGGTGCTCCTCGTGCTCCTTCCTCTTCGATTCGGCCCATTTCGCTTGGTTCGCCGGCGAGTAAGCCAGCTTGTGGATTTTGTAGAACAGCGGAATGGACACGCCGAACGCGATGAAGTAGTAGCGCCAAACCCACTGGTTCTTGAAGTAGTGCTGGATCGGGAACTGGGCCAACTTCGCCGAGAAGGTGTACGGGAACTTCATGGGACGTGCCACCGGGTCCGACATTTTGCTGCTGCTGATGCTGCTGGTGCGTTCTGGGGGGGGATAAGAAAAGAGTTCGCCGATGCCAAGCTTTCAAAACGAATTTTCAATCAGCAAGCCAGTGGGCCAACAGTTCTCGAGGAATTCCGCAGCT]
[+] EMBL CNS096EM [GAACGGGTCGGCAATGAACCCCCACACCTCCCCACCGAAATGCGCACCCACACATGCAGGCATAAAGTGAGTTTGGGCACACACATGTGGACATGCGGGGTGGGTTTTATCGTCGAGCAGATGGGTCCCGCACGGGTGTAACTGTCGACACGCGCGCAACAAACTTTTGATTGCAGAAAGGACCTCTCGCACTAGCTGTGTGTGTTTTTGGGTGCACACGCACACGCACACCCACACACACATGCACACTTTTGACCTTAAGTTGTTAGAAGGCTGAATGTTGGATGCGAAACGCTGGGTTTAGTGGTGCTCCTCGTGCTCCTTCCTCTTCGATTCGGCCCATTTCGCTTGGTTCGCCGGCGAGTAAGCCAGCTTGTGGATTTTGTAGAACAGCGGAATGGACACGCCGAACGCGATGAAGTAGTAGCGCCAAACCCACTGGTTCTTGAAGTAGTGCTGGATCGGGAACTGGGCCAACTTCGCCGAGAAGGTGTACGGGAACTTCATGGGACGTGCCACCGGGTCCGACATTTTGCTGCTGCTGATGCTGCTGGTGCGTTCTGGGGGGGGATAAGAAAAGAGTTCGCCGATGCCAAGCTTTCAAAACGAATTTTCAATCAGCAAGCCAGTGGGCCAACAGTTCTCGAGGAATTCCGCAGCT]
consensusID : consensus_8649#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 394 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTTTTTTTAACGACCGTTTATTTTTTTACCATTTTTTTCGCGATACCGGCTACAGTCTGTTCCCGAGTCACGCGTTTCTCGACATTTTGACACATAACATGTCAAATAAGTACAATTTATTTCAAGAATTGTCCAGCAGTATAAATTGCATTTTTACTAAAATAATTAATCAAATTAAAAGCGAGACCAGAATTTGCTCCACGAATCGTATTAAATCAAGAATAACGTGTATCAAAGTACTGAATTTCATGAAAAATACTGAGCAACTAAAAGGATTTTAGCCTAAAAACGTGAAATCCTACATTCGCAAATTCTTCGGGGATGCATAAACCGCGGAACATGCTCTATATATTGT]
[+] EMBL BM616831 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTTTTTTTAACGACCGTTTATTTTTTTACCATTTTTTTCGCGATACCGGCTACAGTCTGTTCCCGAGTCACGCGTTTCTCGACATTTTGACACATAACATGTCAAATAAGTACAATTTATTTCAAGAATTGTCCAGCAGTATAAATTGCATTTTTACTAAAATAATTAATCAAATTAAAAGCGAGACCAGAATTTGCTCCACGAATCGTATTAAATCAAGAATAACGTGTATCAAAGTACTGAATTTCATGAAAAATACTGAGCAACTAAAAGGATTTTAGCCTAAAAACGTGAAATCCTACATTCGCAAATTCTTCGGGGATGCATAAACCGCGGAACATGCTCTATATATTGT]
consensusID : consensus_8649#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 132 fasta sequence
[AAGCGCACCGCCCGCGCGGAGCCACAGCGAGCCCGCACCCAGGCCGGCCCCCGGCCCGAGGGCCCGAAGACGGGCGAGGACCGCCAGGCAAACCGGCGCAAGCAGCAGGCCGCCCCGGCCGACAAGAAGGGA]
[+] EMBL BX609844 [AAGCGCACCGCCCGCGCGGAGCCACAGCGAGCCCGCACCCAGGCCGGCCCCCGGCCCGAGGGCCCGAAGACGGGCGAGGACCGCCAGGCAAACCGGCGCAAGCAGCAGGCCGCCCCGGCCGACAAGAAGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8649#0 CCGCCCACGCGTCCGGATCGCTCATATATTTTCGGAACCACGACGATAGATAAGAGATAA 60
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 ------------------------------------------------------------
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 ------------------------------------------------------------
consensus_8649#3 ------------------------------------------------------------
consensus_8649#4 ------------------------------------------------------------
consensus_8649#0 GCGACCGTGATCGTGCGTTGGCAATTCGAATTCAGTTTTGTGGGGTGCATTTGAGAAGCG 120
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 ----------------GCTATTGGATCATTTAGTGCTAAACATTCACCAGCGGAGGTGCC 44
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 -----------------AAATCGTAAGCCGCAGTAGTTAGCTGTTGTCGCCCGAGAGTGT 43
consensus_8649#3 -----------------TTTTTTGTTGTCGTTTCGTTGCCAAAACGAGTAGCAATTTTAT 43
consensus_8649#4 ------------------------------------------------------------
consensus_8649#0 CAGCAGCATTCGCCGCAAGGTAAAC-GCGTAGTAGTAGTTGACGCAAAAGACGCGCAGCA 179
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 CAGTCCTAGCAAGGGGAAGCAACACTGCCATAAAGGAGAAGCTTCGAAACGCATTTCGTG 104
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 TCGCAGAGCCCAGCAGAGCGTCACCCGAGAAAGCAGCAGCAGCAGCAGCAGCCAGTGGAG 103
consensus_8649#3 TGCTTGCCTTCCCCTAGAGTCGGGCAATGATCGAGCAGCAGCAGCAAATGACGCACCAGC 103
consensus_8649#4 ------------------------------------------------------------
consensus_8649#0 CAGAAACGATGGCCGATGAAGACAAAGGACTGGTCGCTGGACACCCCCCGGCAGTGAAAG 239
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 TACAGTTGATTGAGTGATTTTAATCCCAAAAAAGAAAGATTATGGCAGAAGAAAACAAAA 164
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 AAATGCAGCGTGGGATTTAATGGAGTGGAGGAGACAAGAGCGAGAGGAGGATGATGATGA 163
consensus_8649#3 GCCTTTGCACGTCAATTAAGATGCGAGGAGAAAATCCTTACATCTCGATGACACGCTGAC 163
consensus_8649#4 ------------------------------------------------GAACGGGTCGGC 12
consensus_8649#0 CGGGTGGAATGCGCATTGTGCAGCATA-AGACTCCGAACAGCGAGCGGCCT------GCC 292
consensus_8649#6 --------------------------A-AGCGCACCGCCCGCGCGGAGCC-------ACA 26
consensus_8649#1 ATGGAGCAGCACCGGCAACGAAGTGGA-ACCGCAAGATGCGCCCGAAG---------AGC 214
consensus_8649#5 ----------------------------------CCGCCCACGCGTCCGC--------CC 18
consensus_8649#2 TGATGATGATGATGAAAAGAAAGGAAG-TGGAAAAGAGCTACATACAACA-------ACA 215
consensus_8649#3 CGGTCTTGTTGGTCTTGTCGAGGAAGTCGGCGAACTCCTGGTACGGGGTCTTGTTCAGCG 223
consensus_8649#4 AATGAACCCCCACACCTCCCCACCGAAATGCGCACC-CACACATGCAGGCAT-----AAA 66
consensus_8649#0 AAGGATCCG-GTCGAGGTCATTG-GGCTCTCGAACCCAGCGCCCAACGTGAACACGGGTG 350
consensus_8649#6 GCGAGCCCGCACCCAGGCC-----GGCCCCCGGCCCGAGGGCCC-----GAAGACGGGCG 76
consensus_8649#1 AAAAGGCTGCATCCGAGGAGGCA-GCACCACCATCCGA-TGTTGAATCGGAACCAGAGCA 272
consensus_8649#5 ACGCGTCCGCCCACGCGTCCGCTTTTTTTAACGACCGTTTATTTTTTTACCATTTTTTTC 78
consensus_8649#2 AAAACGCAACGTAAAAGAGCAAGAAACCATACAGAAAAGAGTAAAGCTAACGAGAGATAA 275
consensus_8649#3 GCAGAACCTTCCACAAGTCCGGCGTCAGGAAGGCGTACGTCTTGGCAATGGCGGCGTACG 283
consensus_8649#4 GTGAGTTTGGGCACACACATGTGGACATGCGGG---GTGGGTTTTATCGTCGAGCAGATG 123
consensus_8649#0 AGGTCGCCCAGTC-CGG-GACGAGCACCAAGCATACCGACCATTCCGTGGAGGCGTCGCA 408
consensus_8649#6 AGGACCGCCAGGC-AAA-CCGGCGCAAGCAGCAGGCCGCCCCGGCCGACAAGAAGGGA-- 132
consensus_8649#1 GGAGCCTCAAATTTCAA-CTTTCGAACGGTTGAAACTATTCCTGGCGGAAACGAACAAGT 331
consensus_8649#5 GCGAT-ACCGGCTACAG-TCTGTTCCCGAGTCACGCGTTTCTCGACATTTTGACACATAA 136
consensus_8649#2 ACATTAAATAAGAAAACTCTTAAGCATAACACAGAAGTAAGCAGTATACAACAACAAACA 335
consensus_8649#3 TGGCCTTCGCGAAGTTACCGAGCGTGGTCGTGGAACCACGGGTGGTGATATAGCAATCGT 343
consensus_8649#4 GGTCCCGCACGGGTGTAACTGTCGACACGCGCGCAACAAACTTTTGATTGCAGAAAGGAC 183
consensus_8649#0 GGTGGCCCATGCCCAGAAGCCGCCGGCACCGGTCCACAGCAAGCCCGTCAATCACATCCA 468
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 TCCTGTTAATGTACGACGAT--CTGGTGGAGAACAAGGACAAGCACAAGAGCGTCTTCCT 389
consensus_8649#5 CATGTCAAATAAGTACAATTTATTTCAAGAATTGTCCAGCAGTATAAATTGCATTTTTAC 196
consensus_8649#2 TGATGGAAACAAATTGAAAACACTACCTAAGCATAGCAAATCAACAAACAGCTTTTTGAT 395
consensus_8649#3 CAATACCAGCCATCTGCAGCAGCTTCTTCGGAACCGGGGCAGAAACGATGCCGGTACCAC 403
consensus_8649#4 CTCTCGCACTAGCTGTGTGTGTTTTTGGGTGCACACGCACACGCACACCCACACACACAT 243
consensus_8649#0 GCAGCCTCGGAAGT--GAATTACTCGCGGTGCATGCTATTGAACCAGTGGCGGGGGTGCG 526
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 GT-GTGCAGTGAAC--GAGCTGCGCGAGCGGCTGGTAACGTTGCTCCAACGGTACATCCT 446
consensus_8649#5 TAAAATAATTAATC--AAATTAAAAGCGAGACCAGAATTTGCTCCACGAATCGTATTAAA 254
consensus_8649#2 AACATCTCTCCAACCGATATGAAAGATAGCATCAAAAAGCGCTGCCCGAAAATAACATCA 455
consensus_8649#3 GCGGACCGGAATCAGACGCACCAGAACGGAACCGCACTTGCCGCTGACCTTGCACGGTAC 463
consensus_8649#4 GCACACTTTTGACCTTAAGTTGTTAGAAGGCTGAATGTTGGATGCGAAACGCTGGGTTTA 303
consensus_8649#0 GAGTGGAAGACGGACGGAAATGAAC---CATCAGCAGCAAACGACGAAGAGTTGGGGGTG 583
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 GCACACGATGGTCAAGGAGGATTTC---CTGTACAAGCACATTGTGTGCTGCGGCGGAGA 503
consensus_8649#5 TCAAGAATAACGTGTATCAAAGTAC---TGAATTTCATGAAAAATACTGAGCAACTAAAA 311
consensus_8649#2 GCAAGCAAAATAATAGCAAAACAGCAGCTATAATATTTTAACAACTTTCAACAGCAGTAA 515
consensus_8649#3 GGTGTGAGGGCGACCGATCTTGTTACCCCAGTAGCCACGACGCACCGGGACAACCGACAG 523
consensus_8649#4 GTGGTGCTCCTCGTGCTCCTTCCTCTTCGATTCGGCCCATTTCGCTTGGTTCGCCGGCGA 363
consensus_8649#0 GTCAAGGGGACAAGGGTGTCCGCCGGATGCACATGCACATTGGCAGGTCCAATTCTCCTC 643
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 GGATGCGGAGGCAATTAATACGGAAGAATTCGAAGAGCACTATCAGGA--AGTTCACAGC 561
consensus_8649#5 GGATTTTAGCCTAAAAACGTGAAATCCTACATTCGCAAATTCTTCGGGGATGCATAAACC 371
consensus_8649#2 CAACAGCAGCAGCAAAAATAAACAACAACAACAGCAACAGCCATAATAATATTTAAAAAC 575
consensus_8649#3 CTTGGCCAGGATGATGGCACCACGGATGGCGGTGGCCACTTCCTTGCTGCACTTCACACC 583
consensus_8649#4 GTAAGCCAGCTTGTGGATTTTGTAGAACAGCGGAATGGACACGCCGAA-CGCGATGAAGT 422
consensus_8649#0 GCCTCCGCCGGTTGATTTGCCCTGCTGGAACGTTTTCGGAGTCCCTGTTCGGCGAGTGTT 703
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 GAGGCAGACAAGGCTATTTCCTTGCCAGAGCTTGACGAGATTCGTGCGTACTCGGCCGAA 621
consensus_8649#5 GCGGAACATGCTCTATATATTGT------------------------------------- 394
consensus_8649#2 AAAGCTTCTTCATCACCACCACCACCACCCACCCACTACCATCACATTGAGACACAACAA 635
consensus_8649#3 CAGACCGATGTGACCGTTGCTGTCGCCGATGGCAACGAACGCCTTGAAGCGGGTACGCTG 643
consensus_8649#4 AGTAGCGCCAAACCCACTGGTTCTTGAAGTAGTGCTGGATCGGGAACTGGGCCAACTTCG 482
consensus_8649#0 TTTTCAAGTTTCTTCTTCCTTTTTTCTTCTCACCATCATCGGTAGATTGATAATTGTCTG 763
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 GTCAAGACGTACATCGAGCTAGGCAAAGCGATGAACAACGATCTGATCTTCTCCCTGAAG 681
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 CACAACAACTCTCTCTTCCCACGCAGACGAAAGAAAGAGAAACAAGTGTTTGCGTGTGTC 695
consensus_8649#3 ACCGGCACGGTTCTGCTTCTGGACGGGCATGATCTTCAGCACCTCATCCTTCAGCAGACG 703
consensus_8649#4 CCGAGAAGGTGTACGGGAACTTCATGGGACGTGCCACCGGGTCCGACATTTTGCTGCTGC 542
consensus_8649#0 AATTTAGAGCGTTGCTTAGCGCGCACACGTTGTTTTTCTTACCTTCAATTTACACGGAAC 823
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 CGACTACTGCGAAAGAGCAATTCCGTGCTGGCGGGACATCTGGGATAAGATGAGCAGTCA 741
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 TCTCAGCAAAGCATTTGCGTGTGTTCCTCCTAACACCACGAGCACGAATTTGTTCAACAG 755
consensus_8649#3 GTTCAGGAAGAAATCGATGATCTCGAACTCTTTGATCGGGAGCGAGTTCAGATAGATTTC 763
consensus_8649#4 TGATGCTGCTGGTGCGTTCTGGGGGGGGATAAGAAAAGAGTTCGCCGATGCCAAGCTTTC 602
consensus_8649#0 TTACACGGGAGCGCGGTGGTGTGCCTCATCGAATTGGAGGCGTTGTAACATTTCTAGTGG 883
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 TCGACTGAGGGGTTTTAGGGACTCTTCAAACACCACTCAACACAAAAACACT-CAACTAG 800
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 CCCGACACCAAAGGAAAGCGTTCAGCTAACAGCAGCAGCAGCAAACTCAGCGGCGGCGGC 815
consensus_8649#3 CTCCAGCGTGCGGATCTTGCCGTCCTTTTTTTTTTTTGGAAACTTCGTCACCGGCACCCA 823
consensus_8649#4 AAAACGAATTTTCAATCAGCAAGCCAGTGGGCCAACAGTTCTCGAGGAATTCCGCAGCT- 661
consensus_8649#0 TCTTGGGTTTGTTTTCCTTTTCAAATTAATAATCCTACTAAT-----ATTTTGTAATACT 938
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 CTCTTAAGCAACAGTAAAATACAAATCTACACTAACCCAGGC-----CATCAGTACTAAT 855
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 GGCATCAGCAGCAGCAGCGCAAACAGCAAAAGCGGCGGAGGCGGCATCAGCAGCAGCAGC 875
consensus_8649#3 TTCCTTCGAGTCCCCCTTGCCGCCGCGTCCG----------------------------- 854
consensus_8649#4 ------------------------------------------------------------
consensus_8649#0 GTTTGTGTACTATCAGAGAGCAAGAAAGGGAAGTAAAAAAGCTGTGCTTTCAGTTAGCGG 998
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 TCCCGCCATTCTGCCAGCAGGATGACGATCAGTTTAGATCATTAACTTGTCATGTGCTTA 915
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 ATCAGCAGCAGTAGCAGCAGCGCAGATAGCAGCTTATCCTTTTATCCTAGT--------- 926
consensus_8649#3 ------------------------------------------------------------
consensus_8649#4 ------------------------------------------------------------
consensus_8649#0 GCTAGTTGGTAGATTGGAAGAAAATAAATGATACAAATAAGTGAAGCATGTTTAAAAAAG 1058
consensus_8649#6 ------------------------------------------------------------
consensus_8649#1 ACGCCAAAATGGATAAAATAAATGTTACCCCTGAAACAAAAAAAAAAAAAAAAAAAAAGG 975
consensus_8649#5 ------------------------------------------------------------
consensus_8649#2 ------------------------------------------------------------
consensus_8649#3 ------------------------------------------------------------
consensus_8649#4 ------------------------------------------------------------
consensus_8649#0 GTGGAAACAAAATATATTGAAGGGCGCATAATTTTAGAGCAA 1100
consensus_8649#6 ------------------------------------------
consensus_8649#1 CCACATGTG--------------------------------- 984
consensus_8649#5 ------------------------------------------
consensus_8649#2 ------------------------------------------
consensus_8649#3 ------------------------------------------
consensus_8649#4 ------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||