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Anopheles gambiae
cluster # 8684 cluster # 8684       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8684#0 length = 1038 sequences # 6  
consensus_8684#1 length = 1013 sequences # 4  
consensus_8684#2 length = 692 sequences # 1  

consensusID : consensus_8684#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1038
fasta sequence
                              [GGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAGAGTGGTACGGTCGGCCGGACTTGGAGTACCCGAGTGTGGAGGAGCAGCAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAA-GCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTT-CC-GTGCTCCGCGAGTTCCCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATACTACCCACCGGCTCCAGTGTACCAGCCTGCCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACCGGCACCGTCTCACTACTATCCCTCACCGGCAGCTTCTCACGGAGCACCAATGCACCAGCAGAAAGAGCACACCGAGTACCCAACTCACCATGCCAAACCGTCCGAAGATGCCCACGGGTATGGCCCATCGTACAAAGCCGCCACACCGGAAGACATTCCCGGGTTTGCCGCACCCGTCCAGGAACCGCTGAGCGAATCGCCCAAGGTGCCGATCATCTCCGCCTTTGCCAAACCGTCCGATCCACCGACCGCCGGGATGCCACCGGTCAGCTCAACCCAACCGAGTGTCAATGGGACAGCAGCACCAGCAGCAGCAGGAGTGGAGGGTGAGACGACATCTCCCAAGACGCCGGTGGGGGCTGCGCTGACGCCCGCGCCACCCGTCCCGCAGAAAGAAAACGATGAGTTCTGGGGCTCGAACGCGGAAAGTTCAACGGACGTTGCTGAGGGCTCCACCGCTCGGTGAAGCGGATGTCGAGG-GGGTGTTTGGTACATTTGAGGTAGAAAATAAACCCGTCCATACCAGGTCTCCGCCTTTGGGTTGGTGCTCGTTAA]

[+] EMBL CNS08JFP             [GGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAGAGTGGTACGGTCGGCCGGACTTGGAGTACCCGAGTGTGGAGGAGCAGCAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAA GCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTT CC GTGCTCCGCGAGTTCCCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATACTACCCACCGGCTCCAGTGTACCAGCCTGCCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACCGGCACCGTCTCACTACTATCCCTCACCGGCAGCTTCTCACGGAGCACCAATGCACCAGCAGAAAGAGCACACCGAGTACCCAACTCACCATGCCAAACCGTCCGAAGATGCCCACGGGTATGGCCCATCGTACAAAGCCGCCACACCGGAAGACATTCCCGGGTTTGCCGCACCCGTCCAGGAACCGCTGAGCGAATCGCCCAAGGTGCCGATCATCTCCGCCTTTGCCAAACCGTCCGATCCACCGACCGCCGGGATGCCACCGGTCAGCTCAACCCAACCGAGTGTCAATGGGACAGCAGCACCAGCAGCAGCAGGAGTGGAGGGTGAGACGACATCTCCCAAGACGCCGGTGGGGGCTGCGCTGACGCCCGCGCCACCGGTCCCGCAGAAAGAAAACGATGAGTTCTGGGGCTCGAACGCGGAAAGTTCAACGGACGTTGCTGAGGGCTCCACCGCTCGGTGAAGCGGATGTCGAGG GGGTGTTTGGTACATTTGAGGTAGAAAATAAA                                           ]
[+] EMBL CNS08PMS             [            CTATCAAGATCGGTCTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAGAGTGGTACGGTCGGCCGGACTTGGAGTACCCGAGTGTGGAGGAGCAGCAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAA GCAAGCTGTGCGCAGAATTTACTGATCGGTTGTTCGCCCACCGTGACGCGGGTT CC GTTCTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08NFT             [                    gTCGGTTTGCTGTGTCTA TGTCGGTGGTGGCGG CCGGGGGGCGTTA GGCAGTGCGGTGAAGAGTGGTACGGTCGGCCGGACTTGGAGTACCCGAGTGTGGAGGAGCAGCAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAA GCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTT CC GTGCTCCGCGAGTTCCCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATACTACCCACCGGCTCCAGTGTACCAGCCTGCCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACCGGCACCGTCTCACTACTATCCCTCACCGGCAGCTTCTCACGGAGCACCAATGCACCAGCAGAAAGAGCACACCGAGTACCCAACTCACCATGCCAAACCGTCCGAAGATGCCCACGGGTATGGCCCATCGTACAAAGCCGCCACACCGGAGGACATTCCCGGGTTTGCCGCACCCGTCCAGGAACAACTGAGCGAATCGCCCAAGGTGCCGATCATCTCCGCCTTTGCCAAACCGTCCGATCCACCGACCGCCGGGATGCCACCGGTCAGCTCAACCCAACCGAGTGTCAATGGGACAGCAGCACCAGCAGCAGCAGGAGTGGAGGGTGAGACGACATCTCCCAAGACGCCGGTGGGGGCTGCGCTGACGCCCGCGCCACCCGTCCCGCCGAc                                                                                                                                                                   ]
[-] EMBL CNS08NFU             [                                                                                                                                                        ACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAAGGCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTTCCC GT CTCCGCGAGTTTCCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATACTACCCACCCGCTCCAGTGTACCAGCCTGCCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACCGGCACCGTCTCACTACTATCCCTCACCGGCAGCTTCTCACGGAGCACCAATGCACCAGCAGAAAGAGCACACCGAGTACCCAACTCACCATGCCAAACCGTCCGAAGATGCCCACGGGTATGGCCCATCGTACAAAGCCGCCACACCGGAAGACATTCCCGGGTTTGCCGCACCCGTCCAGGAACCGCTGAGCGAATCGCCCAAGGTGCCGATCATCTCCGCCTTTGCCAAACCGTCCGATCCACCGACCGCCGGGATGCCACCGGTCAGCTCAACCCAACCGAGTGTCAATGGGACAGCAGCACCAGCAGCAGCAGGAGTGGAGGGTGAGACGACATCTCCCAAGACGCCGGT GGGGCTGC CTGACGCCCGCGCCAGCCGTCCCGCAGGAAGAAAACGATGAGTTCTGGGGCTCGAACGCGGAAAGTTCAACGGACGTTGCTGAGGGCTCCACCGCTCGGTGAAGCGGATGTCGAGG GGGTGTTTGGTACATTTGAGGTAGAAAATAAACCCGTCCATACCAGGTCTCCGCCTTTGGGTTGGTGCTCGTTAA]
[-] EMBL CNS08JFQ             [                                                                                                                                                                         CGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAAGGCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTT CCGGTG TCCGCGAGTTCCCCTTACGATGTTCATGCTTCGGGCGGTGTTCCATACTACCCACCGGCTCCAGTGTACCAGCCTGCCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACCGGCACCGTCTTACTACTATCCCTCACCGGCAGCTTCTCACGGAGCACCAATGCACCAGCAGAAAGAGCACACCGAGTACCCAACTCACCATGCCAAACCGTCCGAAGATGCCCACGGGTTTGGCCCATCGTACAAAGCCGCCACACCGGAAGACATTCCCGGGTTTGCCGCACCCGTCCAGGAACCGCTGAGCGAATCGCCCAAGGTGCCGATCATCTCCGCCTTTGCCAAACCGTCCGATCCACCGACCGCCGGGATGCCACCGGTCAGCTCAACCCAACCGAGTGTCAATGGGACAGCAGCACCAGCAGCAGCAGGAGTGGAGGGTGAGACGACATCTCCCAAGACGCCGGTGGGGG TGCG TGACGCCCGCGCCAGCCGTCCCGCAGGAAGAAAACGATGAGTTCTGGGGCTCGAACGCGGAAAGTTCAACGGACGTTGCTGAGGGCTCCACCGCTCGGTGAAGCGGATGTCGAGG GGGTGTTTGGTACATTTGAGGTAGAAAATAAACCCGTCCATACCAGGTCTCCGCCTTTGGGTTGGTG        ]
[-] EMBL CNS08PMT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AACGATGAGTTCTGGGGCTCGAACGCGGAAAGTTCCACGGACGTTGCTGAGGGCTCCACCGCTCGGTGAAGCGGATGTCGAGGCGGGTGTTTG                                                                  ]


>consensus_8684#0 GGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGG GGGCGTTAGGGCAGTGCGGTGAAGAGTGGTACGGTCGGCCGGACTTGGAGTACCCGAGTG TGGAGGAGCAGCAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGT TGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGAC CGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAAGCAAGCTGTGC GCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTTCCGTGCTCCGCGAGTTC CCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATACTACCCACCGGCTCCAGTGTACCA GCCTGCCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGG ACCGGCACCGTCTCACTACTATCCCTCACCGGCAGCTTCTCACGGAGCACCAATGCACCA GCAGAAAGAGCACACCGAGTACCCAACTCACCATGCCAAACCGTCCGAAGATGCCCACGG GTATGGCCCATCGTACAAAGCCGCCACACCGGAAGACATTCCCGGGTTTGCCGCACCCGT CCAGGAACCGCTGAGCGAATCGCCCAAGGTGCCGATCATCTCCGCCTTTGCCAAACCGTC CGATCCACCGACCGCCGGGATGCCACCGGTCAGCTCAACCCAACCGAGTGTCAATGGGAC AGCAGCACCAGCAGCAGCAGGAGTGGAGGGTGAGACGACATCTCCCAAGACGCCGGTGGG GGCTGCGCTGACGCCCGCGCCACCCGTCCCGCAGAAAGAAAACGATGAGTTCTGGGGCTC GAACGCGGAAAGTTCAACGGACGTTGCTGAGGGCTCCACCGCTCGGTGAAGCGGATGTCG AGGGGGTGTTTGGTACATTTGAGGTAGAAAATAAACCCGTCCATACCAGGTCTCCGCCTT TGGGTTGGTGCTCGTTAA



consensusID : consensus_8684#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1013
fasta sequence
                              [CCGCCCACGCGTCCGGTGAACCGGTAGTCGTCGCTCGTCCGTCCTCGAGCGTGTTGTGTGTGTGCGGGTTTTGGCTTCCGCCTGACCTGGTGTGTCTGTAACAGCAAATAAAATAAAACATAACAAAAGACACCCGGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGCCCGAATGCCGGCTGGTGCCTTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCCAGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAG-AGTGGTACGGTCGGCCGGACTTGGAGTACCCG-AGTGTGGAGGAGCAGCAATCTTCCCGCAGCTACGAGGAACCGAGCGAGGAGTACTACACGGTGAAGCAGCAGCGTTCGCTGCGAGCAAGCCGTT-ACACCCCAGCAGTCTACCGGTATGCCAATGACTTCCGGCAGGATGGTGAGGACAGTGACTGGG-AGCGGTACGGTGCCGGACGCAAGTCGCACTACGATGTGCATAAGGCACGCAGCCGCAAGTCGTACGATTCGTACGGTAAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAAGGCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTTCCGTGCTCCGCGAGTTCCCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATACTACCACGGCTCCAGTGTACCAGCTGCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACC]

[+] EMBL BM602436             [CCGCCCACGCGTCCGGTGAACCGGTAGTCGTCGCTCGTCCGTCCTCGAGCGTGTTGTGTGTGTGCGGGTTTTGGCTTCCGCCTGACCTGGTGTGTCTGTAACAGCAAATAAAATAAAACATAACAAAAGACACCCGGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGCCCGAATGCCGGCTGGTGCCTTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCCAGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAGAAGTGGTACGGTCGGCCGGACTTGGAGTACCCGAAGTGTGGAGGAGCAGCAATCTTCCCGCAGCTACGAGGAACCGAGCGAGGAGTACTACACGGTGAAGCAGCAGCGTTCGCTGCGAGCAAGCCGTTAACACCCCAGCAGTCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM583312             [                                ccgCGTCCGTCCTCGAGCGTGTTGTGTGTGTGCGGGTTTTGGCTTCCGCCTGACCTGGTGTGTCTGTAACAGCAAATAAAATAAAACATAACAAAAGACACCCGGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGCCCGAATGCCGGCTGGTGCCTTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCCAGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAG AGTGGTACGGTCGGCCGGACTTGGAGTACCCG AGTGTGGAGGAGCAGCAATCTTCCCGCAGCTACGAGGAACCGAGCGAGGAGTACTACACGGTGAAGCAGCAGCGTTCGCTGCGAGCAAGCCGTT ACACCCCAGCAGTCTACCGGTATGCCAATGACTTCCGGCAGGATGGTGAGGACAGTGACTGGGCAGCGGTACGGTGCCGGACGCAAGTCGCACTACGATGTGCATAAGGCACGCAGCCGCAAGTCGTACGATTCG                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX602060             [                                                                                 CTGACCTGGTGTGTCTGTAACAGCAAATAAAATAAAACATAACAAAAGACACCCGGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGCCCGAATGCCGGCTGGTGCCTTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCCAGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAG AGTGGTACGGTCGGCCGGACTTGGAGTACCCG AGTGTGGAGGAGCAGCAATCTTCCCGCAGCTACGAGGAACCGAGCGAGGAGTACTACACGGTGAAGCAGCAGCGTTCGCTGCGAGCAAGCCGTT ACACCCCAGCAGTCTACCGGTATGCCAATGACTTCCGGCAGGATGGTGAGGACAGTGACTGGG AGCGGTACGGTGCCGGACGCAAGTCGCACTACGATGTGCATAAGGCACGCAGCCGCAAGTCGTACGATTCGTACGGTAAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGAC                                                                                                                                                                                                                                                                                         ]
[+] EMBL AL695470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       cccgaggttAATCTTCCCGCAGCTACGAGGAACCGAGCGAGGAGTACTACACGGTGAAGCAGCAGCGTTCGCTGCGAGCAAGCCGTT ACACCCCAGCAGTCTACCGGTATGCCAATGACTTCCGGCAGGATGGTGAGGACAGTGACTGGG AGCGGTACGGTGCCGGACGCAAGTCGCACTACGATGTGCATAAGGCACGCAGCCGCAAGTCGTACGATTCGTACGGTAAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAAGGCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTTCCGTGCTCCGCGAGTTCCCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATACTACCACGGCTCCAGTGTACCAGCTGCCCGTCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACC]


>consensus_8684#1 CCGCCCACGCGTCCGGTGAACCGGTAGTCGTCGCTCGTCCGTCCTCGAGCGTGTTGTGTG TGTGCGGGTTTTGGCTTCCGCCTGACCTGGTGTGTCTGTAACAGCAAATAAAATAAAACA TAACAAAAGACACCCGGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTA CCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGCCCGAATGCCGGCTGGTGCCTTA AGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCCAG TGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGT GGTGGCGGCCCGGGGGGCGTTAGGGCAGTGCGGTGAAGAGTGGTACGGTCGGCCGGACTT GGAGTACCCGAGTGTGGAGGAGCAGCAATCTTCCCGCAGCTACGAGGAACCGAGCGAGGA GTACTACACGGTGAAGCAGCAGCGTTCGCTGCGAGCAAGCCGTTACACCCCAGCAGTCTA CCGGTATGCCAATGACTTCCGGCAGGATGGTGAGGACAGTGACTGGGAGCGGTACGGTGC CGGACGCAAGTCGCACTACGATGTGCATAAGGCACGCAGCCGCAAGTCGTACGATTCGTA CGGTAAATCTTCCCGCAGTGATTACACTATGAAGGGAGCGCCCGTTGGGAAGTTGTACGA GCGCAAGAAGACAAGCCGAGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTA CGGCAAGACAACCTCGCTGACGTATAAGGCAGTAGCACCGAAGGCAAGCTGTGCGCAGAA TTTACTGATCGGTTGTACGCCCACCGTGACGCGGGTTCCGTGCTCCGCGAGTTCCCCTTA CGATGGTCATGCTTCGGGCGGTGTTCCATACTACCACGGCTCCAGTGTACCAGCTGCCCG TCTACTCATCATTATGGAATGCCTTACGCAGCACCGTATGGTGGGTATGGACC



consensusID : consensus_8684#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence
                              [GATCCCGAGGTTTATCGTCGCTCGTCGTCCTCCAGCGTGTTGTGTGTGTGCGGGTTTTGGCTTCCGCCTGACTGGTGTGTCTGTAACAGCAAATAAAATAAAACATAACAAAAGACACCCGGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGGCCGAATGCCGGCTGGTGCCTTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCAGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTATGCTGTGTCTACTGTACGGTGGTGGCGGCCGGGGGGCGTTAGTGGCAGATGCGGTGAAAGTGGTACGCGTCGGCGGACTTGGAGTACCCGAGTGTTGGGAGGAGCAGCAATCTTCCCGCAGACTACGAGGAACCGAGCGAGGAGTACTACACGGTGAAGCAGCAGCGTTCGCTGCGANCAAGCCGTTAAACCCCCACCAGTCTACCGGTATGCCAATGACTTCCGGCAGGATGGTGAGTGACAGTGACTGGAGCGGTAGGTGCCGGACGCAAGTCGCACTACGATGTGCATACNTGGNCGCAGCGCCAGTCGCAACCGACTNGTACGGTAAATCTTCCCGCCAGCTGATTACACNATNCAAGGNAG]

[+] EMBL AL930501             [GATCCCGAGGTTTATCGTCGCTCGTCGTCCTCCAGCGTGTTGTGTGTGTGCGGGTTTTGGCTTCCGCCTGACTGGTGTGTCTGTAACAGCAAATAAAATAAAACATAACAAAAGACACCCGGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGGCCGAATGCCGGCTGGTGCCTTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCAGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTATGCTGTGTCTACTGTACGGTGGTGGCGGCCGGGGGGCGTTAGTGGCAGATGCGGTGAAAGTGGTACGCGTCGGCGGACTTGGAGTACCCGAGTGTTGGGAGGAGCAGCAATCTTCCCGCAGACTACGAGGAACCGAGCGAGGAGTACTACACGGTGAAGCAGCAGCGTTCGCTGCGANCAAGCCGTTAAACCCCCACCAGTCTACCGGTATGCCAATGACTTCCGGCAGGATGGTGAGTGACAGTGACTGGAGCGGTAGGTGCCGGACGCAAGTCGCACTACGATGTGCATACNTGGNCGCAGCGCCAGTCGCAACCGACTNGTACGGTAAATCTTCCCGCCAGCTGATTACACNATNCAAGGNAG]


>consensus_8684#2 GATCCCGAGGTTTATCGTCGCTCGTCGTCCTCCAGCGTGTTGTGTGTGTGCGGGTTTTGG CTTCCGCCTGACTGGTGTGTCTGTAACAGCAAATAAAATAAAACATAACAAAAGACACCC GGAAGAGATCAATCTGCCCGCGCTGTGGACCGTTACATCCCGTTACCGCGTTCTTGAGAG AGAGATTCCCCGAAGGAGTCTGGCCGAATGCCGGCTGGTGCCTTAAGTGTGTGTGTGTCT CCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGCAGTGAACAGTGAGTGCGG TACGTTATGGCTATCAAGATCGGTTATGCTGTGTCTACTGTACGGTGGTGGCGGCCGGGG GGCGTTAGTGGCAGATGCGGTGAAAGTGGTACGCGTCGGCGGACTTGGAGTACCCGAGTG TTGGGAGGAGCAGCAATCTTCCCGCAGACTACGAGGAACCGAGCGAGGAGTACTACACGG TGAAGCAGCAGCGTTCGCTGCGANCAAGCCGTTAAACCCCCACCAGTCTACCGGTATGCC AATGACTTCCGGCAGGATGGTGAGTGACAGTGACTGGAGCGGTAGGTGCCGGACGCAAGT CGCACTACGATGTGCATACNTGGNCGCAGCGCCAGTCGCAACCGACTNGTACGGTAAATC TTCCCGCCAGCTGATTACACNATNCAAGGNAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8684#1      CCGCCCACGCGTCCGGTGAACCGGTAGTCGTCGCTCGTCCGT-CCTCGAGCGTGTTGTGT 59
consensus_8684#2      ---------GATCCCGAG----GTTTATCGTCGCTCGTC-GT-CCTCCAGCGTGTTGTGT 45
consensus_8684#0      ---------GGTACGTTATGGCTATCAAGATCGGTTTGCTGTGTCTACTGTCGGTGGTGG 51
                                 * *          *     *** *   * **  **   *   ** *** 

consensus_8684#1      GTGTGCGGGTTTTGGCTTCCGCCTGACCTGGTGT-GTCTGTAACAGCAAATAAAATAAAA 118
consensus_8684#2      GTGTGCGGGTTTTGGCTTCCGCCTGAC-TGGTGT-GTCTGTAACAGCAAATAAAATAAAA 103
consensus_8684#0      CGGCCCGGGG---GGCGTTAGGGCAGTGCGGTGAAGAGTGGTACGGTCGGCCGGACTTGG 108
                        *  ****    *** *  *        ****  *  **  ** *        *     

consensus_8684#1      CATAACAAAAGACACCCGGAAGAG-ATCAATCTGCCCGCGCTGTGGACCGTTACATCCCG 177
consensus_8684#2      CATAACAAAAGACACCCGGAAGAG-ATCAATCTGCCCGCGCTGTGGACCGTTACATCCCG 162
consensus_8684#0      AGTACCCGAG----TGTGGAGGAGCAGCAATCTTCCCGCAGTG---ATTACACTATGAAG 161
                        ** *  *        *** *** * ****** *****  **   *       **   *

consensus_8684#1      TTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGCCCGAATGCCGGCTGGTGCC 237
consensus_8684#2      TTACCGCGTTCTTGAGAGAGAGATTCCCCGAAGGAGTCTGGCCGAATGCCGGCTGGTGCC 222
consensus_8684#0      GGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCGA--GCGGCCAAGTACG 219
                        * ***    * *  **    *    *  *** ** *   ****  ** * *  ** * 

consensus_8684#1      TTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGC 297
consensus_8684#2      TTAAGTGTGTGTGTGTCTCCCGTCCACCTCTTCATATAAGAAAGACCTTCAGGCATTGGC 282
consensus_8684#0      GTG---GAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCTGACGTATAAGG 276
                       *    * *   **    *  * **  *       *  * **   *  * * * **  * 

consensus_8684#1      CAGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTT-TGCTGTGTCTACTGT 356
consensus_8684#2      -AGTGAACAGTGAGTGCGGTACGTTATGGCTATCAAGATCGGTTATGCTGTGTCTACTGT 341
consensus_8684#0      CAGTAGCACCGAAGCAAGCTGTGCGCAGAATTTACTGATCGGTTGTACGCCCACCGTGAC 336
                       ***        **   * *  *    *  * *   ******** * *     *      

consensus_8684#1      -CGGTGGTGGCGGCCCGGGGGG--CGTTAG-GGCAG---TGCGGTGAAGAGTG----GTA 405
consensus_8684#2      ACGGTGGTGGCGGCC-GGGGGG--CGTTAGTGGCAGA--TGCGGTGAA-AGTG----GTA 391
consensus_8684#0      GCGGGTTCCGTGCTCCGCGAGTTCCCCTTACGATGGTCATGCTTCGGGCGGTGTTCCATA 396
                       ***     * *  * * * *   *  *   *   *   ***   *    ***     **

consensus_8684#1      CGGTCGGCCGGACTTGGAGTACCCGAGTGT--GGAGGAGCAGCAATCTTCCCGCAG-CTA 462
consensus_8684#2      CGCGTCGGCGGACTTGGAGTACCCGAGTGTTGGGAGGAGCAGCAATCTTCCCGCAGACTA 451
consensus_8684#0      CTACCCACCGGCTCCAGTGTACCAGCCTGCCCCGTCTACTCATCATTATGGAATGCCTTA 456
                      *       ***     * ***** *  **    *   *      **  *         **

consensus_8684#1      CGAGGAACCGAGCGAGGAGTACTACACGGTGAAG---CAGCAGCGTTCGCTGCGAGCAAG 519
consensus_8684#2      CGAGGAACCGAGCGAGGAGTACTACACGGTGAAG---CAGCAGCGTTCGCTGCGANCAAG 508
consensus_8684#0      CGCAGCACCGTATGGTGGGTATGGACCGGCACCGTCTCACTACTATCCCTCACCGGCAGC 516
                      **  * ****   *  * ***     ***    *   **  *   * *    *   **  

consensus_8684#1      CCGTTACACCCC-AGCAGTCTACCGGTA---------TGCCAATGACTTCCGGCAGGATG 569
consensus_8684#2      CCGTTAAACCCCCACCAGTCTACCGGTA---------TGCCAATGACTTCCGGCAGGATG 559
consensus_8684#0      TTCTCACGGAGC-ACCAATGCACCAGCAGAAAGAGCACACCGAGTACCCAACTCACCATG 575
                         * *     * * ** *  *** * *           ** *  **      **  ***

consensus_8684#1      GTGAG--GACAGTGACTGGGAGCGG-TACGGTGC--CGGACGCAAGTCGCACTACGATGT 624
consensus_8684#2      GTGAGT-GACAGTGACTGG-AGCGG-TA-GGTGC--CGGACGCAAGTCGCACTACGATGT 613
consensus_8684#0      CCAAACCGTCCGAAGATGCCCACGGGTATGGCCCATCGTACAAAGCCGCCACACCGGAAG 635
                         *   * * *    **    *** ** **  *  ** **  *     ***  **    

consensus_8684#1      GCATAAG-GCACGCAGCCGCAAGTCGTA--CGATTCGTACGGTAAATCTTCCCGC--AGT 679
consensus_8684#2      GCATACNTGGNCGCAGC-GCCAGTCGCAACCGACTNGTACGGTAAATCTTCCCGCCAGCT 672
consensus_8684#0      ACATTCCCGGGTTTGCC--GCACCCGTCCAGGAACCGCTGAGCGAATCGCCCAAGGTGCC 693
                       ***    *       *    *  **     **   *    *  ****  **        

consensus_8684#1      GATTACACTATG-AAGGGAGCGCCCGTTGGGAAGTTGTACGAGCGCAAGAAGACAAGCCG 738
consensus_8684#2      GATTACACNATNCAAGGNAG---------------------------------------- 692
consensus_8684#0      GATCATCTCCGCCTTTGCCAAACCGTCCGATCCACCGACCGCCGGGATGCCACCGGTCAG 753
                      *** *           *                                           

consensus_8684#1      AGCGGCCAAGTACGGTGGAGAAGGTCCAACTGGACCGTCGTACGGCAAGACAACCTCGCT 798
consensus_8684#2      ------------------------------------------------------------
consensus_8684#0      CTCAACCCAACCGAGTGTCAATGGGACAGCAGCACCAGCA-GCAGCAGGAGTGGAGGGTG 812
                                                                                  

consensus_8684#1      GACGTATAAGGCAGTAGCACCGAAGGCAAGCTGTGCGCAGAATTTACTGATCGGTTGTAC 858
consensus_8684#2      ------------------------------------------------------------
consensus_8684#0      AGACGACATCTCCCAAGACGCCGGTGGGGGCTGCGCTGACGCCCGCGCCACCCGTCCCGC 872
                                                                                  

consensus_8684#1      GCCCACCGTGACGCGGGTTCCGTGCTCCGCGAGTTCCCCTTACGATGGTCATGCTTCGGG 918
consensus_8684#2      ------------------------------------------------------------
consensus_8684#0      AGAAAGAAAACGATGAGTTCTGGGGCTCGAACGCGGAAAGTTCAACGGACGTTGCT-GAG 931
                                                                                  

consensus_8684#1      CGGTGTTCCATACTACCACGGCTCCAGTGTACCAGCTGCCCGTCTACTCATCATTATGGA 978
consensus_8684#2      ------------------------------------------------------------
consensus_8684#0      GGCTCCACCGCTCGGTGAAGCGGATGTCGAGGGGGTGTTTGGTACATTTGAGGTAGAAAA 991
                                                                                  

consensus_8684#1      ATGCCTTACGCAGCACCGTATGGTGGGTATGGACC------------ 1013
consensus_8684#2      -----------------------------------------------
consensus_8684#0      TAAACCCGTCCATACCAGGTCTCCGCCTTTGGGTTGGTGCTCGTTAA 1038
                                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)