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Anopheles gambiae
cluster # 8719 cluster # 8719       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8719#0 length = 1666 sequences # 8  
consensus_8719#1 length = 613 sequences # 2  
consensus_8719#2 length = 497 sequences # 1  

consensusID : consensus_8719#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1666
fasta sequence
                              [CCGGGAAGCGCTGTGCACAGAACCAGCGACGGCCAAACGCGTACAGGAAGTGCGCGATTTTACACGCGCCGAAAAGAAGCGACTAGCAATGGCGACCCGAGAGAAGCAGCTGGACGCGCTTGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGACCGGCTATACCACGGTAACACACTTCAACGTTGTACACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGTGCCTCGCTGCAGAACGCCAACACGCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTGAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCT-GGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTATCTGCTGTTTTATGGACTGTACACGTTGCTCTCGTCTCGGTCATACTCGCGGGAGGAGATGATCCTGACCAATTTCATCGGCCACAAACCCTCGGAACGCTGGTT-GGAATGTGCCTACGAAGCGGAGGGTCCCCTCTATCTGCTCACCATGTCACTAGCGTTGCACACGCCCGACCTGTGGTCACGCCACAAGCTGGTACATCTGCAGAGGTTGATTGTGATCGCTCATGCCCGACACGTAAGCCCGAACTCCGTCTGCAAGTTCCTTGCGCCTGCCGATAAGCATCCAAAGGATTACACGATCTACAAACCGTATCTGATGTTCTGGGGGCTTGTCGATTTGATCTATTGCAACTTTTTCCGTACCGTCACAACGCCG-AAGGACGAAGATTGG-CCGATCTCGCTGTTCAACTACATTCGCCGAAACGACGAGTCCCTTCTCAAGACGGCCGACACCACACTGCAAACATTCACGGAGGAATACTTACCGTGCGCTTCGTTTGGCGAATTTTGTGACGTGGCAGGTCTGCTCGGAGAAATAGAAAATCCAGATGCGTGGATGGAGGACCTGTTGCAAGCGTTGCCAGCACCGGGCGGTGGTTCATCTGCTGGAGGATCAAGTGCAGCAGGTTCAAGCGGTGGAACCGGCCCGGCGGGAGCTGCATCA-GGATCGAGCGGTGCAGAATGAAGATACTCGGCCGGATCATTAAATGAGAAGCGTTGCTGGCGGCTAGCTTAATGGATTTTGTCATTGGCTCATTTGGCGCCCCACTACGCACGTATTTTAGTCGAGTGTGAAACGCTTTACATTATGCTGTAGCGCACATAGTTGCATGCGAACTTATAATATTGGCCCATCGTAAACTGATGAAGATTGGGACGGTAGCACATATGCATATTTATCTTCAATATAATCTTTATCAATGCTTTCATACATATATAAATTGTTTTGTCATCAAATGGTGTTAATTGAAATAAATTAAAAGGTATT]

[+] EMBL BM633275             [CCGGGAAGCGCTGTGCACAGAACCAGCGACGGCCAAACGCGTACAGGAAGTGCGCGATTTTACACGCGCCGAAAAGAAGCGACTAGCAATGGCGACCCGAGAGAAGCAGCTGGACGCGCTTGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGACCGGCTATACCACGGTAACACACTTCAACGTTGTACACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGTGCCTCGCTGCAGAACGCCAACACGCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTGAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCTGGGCGGTGGTGGTCCACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM643396             [                                                                                                CCGAGAGAAGCAGCTGGACGCGCTTGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGACCGGCTATACCACGGTAACACACTTCAACGTTGTACACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGTGCCTCGCTGCAGAACGCCAACACGCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTGAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCT GGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTATCTGCTGTTTTATGGACTGTACACGTTGCTCTCGTCTCGGTCATACTCGCGGGAGGAGATGATCCTGACCAATTTCATCGGCCACAAACCCTCGGAACGCTGGTTGGGAATGTGCGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX626562             [                                                                                                                                                                                AGATTGAGAAACTGCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGACCGGCTACACCACGGTAACACACTTCAACGTTGTACACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGCGCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTAAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGNGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCT GGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTATCTGCTGTTTTATGGACTGTACACGTTGCTCTCGTCTCGGTCATACTCGCGCGAGGAGATGATCCTGACCAATTTCATCGGNCACAAACCCTCGGAGCGCTGGTT GGAATGTGCCTACGAAGCGGANGGTCCCCTCTATCTGCTCACCATGTCACTAGNGTTGCACACGCCCGANCTGTGGTCACGCCACAAGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX611440             [                                                                                                                                                                                                                                                                                                                                                                                                                             AAAGCGCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTAAGTGAGTCTTCGTTCTCATCGTCTATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCT GGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTATCTGCTGTTTTATGGACTGTACACGTTGCTCTCGTCTCGGTCATACTCGCGCGAGGAGATGATCCTGACCAATTTCATCGGCCACAAACCCTCGGAGCGCTGGTT GGAATGTGCCTACGAAGCGGAGGGTCCCCTCTATCTGCTCACCATGTCACTAGCGTTGCACACGCCCGACCTGTGGTCACGCCACAAGCTGGTACATCTGCAGAGGTTGATTGTGATCGCTCATGCCCGACACGTAAGCCCGAACTCCGTCTGCAAGTTCCTTGCGCCTGCCGATAAGCATCCAAAGGATTACACGATCTACAAACCGTATCTGATGTTCTGGGGGCTTGTCGATTTGATCTATTGCAACTTTTTCCGTACCGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM607934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCGGACGTGAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCT GGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTATCTGCTGTTTTATGGACTGTACACGTTGCTCTCGTCTCGGTCATACTCGCGGGAGGAGATGATCCTGACCAATTTCATCGGCCACAAACCCTCGGAACGCTGGTT GGAATGTGCGTACGAAGCGGAGGGTCCCCTCTATCTGCTCACCATGTCACTAGCGTTGCACACGCCCGACCTGTGGTCACGCCACAAGCTGGTACATCTGCAGAGGTTGATTGTGATCGCTCATGCCCGACACGTAAGCCCGAACTCCGTCTGCAAGTTCCTTGCGCCTGCCGATAAGCATCCAAAGGATTACACGATCTACAAACCGTATCTGATGTTCTGGGGGCTTGTCGATTTGATCTATTGCAACTTTTTCCGTACCGTCACAACGCCG AAGGACGAAGATTGGCCCGATCTCGCTGTTCAACTACATTCGCCGAAACGACGAGTCCCTTCTCAAGACGGCCGACACCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM582925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGCCTACGAAGCGGAGGGTCCCCTCTATCTGCTCACCATGTCACTAGCGTTGCACACACCCGACCTGTGGTCACGCCACAAGCTGGTACATCTGCAGAGGTTGATTGTGATCGCTCATGCCCGACACGTAAGCCCGAACTCCGTCTGCAAGTTCCTTGCGCCTGCCGATAAGCATCCAAAGGATTACACGATCTACAAACCGTATCTGATGTTCTGGGGGCTTGTCGATTTGATCTATTGCAACTTTTTCCGTACCGTCACAACGCCG AAGGACGAAGACTGG CCGATCTCGCTGTTCAACTACATTCGCCGAAACGACGAGTCCCTTCTCAAGACGGCCGACACCACACTGCAAACATTCACGGAGGAATACTTACCGTGCGCTTCGTTTGGCGAATTTTGTGACGTGGCAGGTCTGCTCGGAGAAATAGAAAATCCAGATGCGTGGATGGAGGACCTGTTGCAAGCGCTGCCAGCACCGGGCGGTGGTTCATCTGCTGGAGGATCAAGTGCAGCAGGTTCAAGCGGTGGAACCGGCCCGGCGGGAGCTGCATCAGGGATCGAGCGGTGCACAATGAAGATACTCGGCCGGATCATTAAATGAGAAGCGTTGCTGGCGGTCAGCTTAATGG                                                                                                                                                                                                                                                         ]
[+] EMBL BX611687             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAACTCCGTCTGCAAGTTCCTTGCGCCTGCCGATAAGCATCCAAAGGATTACACGATCTACAAACCGTATCTGATGTTCTGGGGGCTTGTCGATTTGATCTATTGCAACTTTTTCCGTACCGTCACAACGCCG AAGGACGAAGATTGG CCGATCTCGCTGTTCAACTACATTCGCCGAAACGACGAGTCCCTTCTCAAGACGGCCGACACCACACTGCAAACATTCACGGAGGAATACTTACCGTGCGCTTCGTTTGGCGAATTTTGTGACGTGGCAGGTCTGCTCGGAGAAATAGAAAATCCAGATGCGTGGATGGAGGACCTGTTGCAAGCGTTGCCAGCACCGGGCGGTGGTTCATCTGCTGGAGGATCAAGTGCAGCAGGTTCAAGCGGTGGAACCGGCCCGGCGGGAGCTGCATCA GGATCGAGCGGTGCAGAATGAAGATACTCGGCCGGATCATTAAATGAGAAGCGTTGCTGGCGGCTAGCTTAATGGATTTTGTCATTGGCTCATTTGGCGCCCCACTACGCACGTATTTTAGTCGAGTGTGAAACGCTTTACATTATGCTGTAGCGCACATAGTTGCATGCGAACTTATAATATTGGCCCATCGTAAACTGATGAAGATTGGGACGGTAGCACATATGCATATTTATCTTCAATATAA                                                                             ]
[-] EMBL BX611686             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTGGGGGCTTGTCGATTTGATCTATTGCAACTTTTTCCGTACCGTCACAACGCCGAAAGGACGAAGATTGG CCGATCTCGCTGTTCAACTACATTCGCCGAAACGACGAGTCCCTTCTCAAGACGGCCGACACCACACTGCAAACATTCACGGAGGAATACTTACCGTGCGCTTCGTTTGGCGAATTTTGTGACGTGGCAGGTCTGCTCGGAGAAATAGAAAATCCAGATGCGTGGATGGAGGACCTGTTGCAAGCGTTGCCAGCACCGGGCGGTGGTTCATCTGCTGGAGGATCAAGTGCAGCAGGTTCAAGCGGTGGAACCGGCCCGGCGGGAGCTGCATCA GGATCGAGCGGTGCAGAATGAAGATACTCGGCCGGATCATTAAATGAGAAGCGTTGCTGGCGGCTAGCTTAATGGATTTTGTCATTGGCTCATTTGGCGCCCCACTACGCACGTATTTTAGTCGAGTGTGAAACGCTTTACATTATGCTGTAGCGCACATAGTTGCATGCGAACTTATAATATTGGCCCATCGTAAACTGATGAAGATTGGGACGGTAGCACATATGCATATTTATCTTCAATATAATCTTTATCAATGCTTTCATACATATATAAATTGTTTTGTCATCAAATGGTGTTAATTGAAATAAATTAAAAGGTATT]


>consensus_8719#0 CCGGGAAGCGCTGTGCACAGAACCAGCGACGGCCAAACGCGTACAGGAAGTGCGCGATTT TACACGCGCCGAAAAGAAGCGACTAGCAATGGCGACCCGAGAGAAGCAGCTGGACGCGCT TGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGAT TGAGAAACTGCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTG CCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTT TGAGATGAAGCAGAAGAAAACGACCGGCTATACCACGGTAACACACTTCAACGTTGTACA CGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGTGC CTCGCTGCAGAACGCCAACACGCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGT GAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCAC GCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCG CTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCTGGCGGTGGTGGTCCACAGTCGAACAT GCATTTGGTCGCTTATCTGCTGTTTTATGGACTGTACACGTTGCTCTCGTCTCGGTCATA CTCGCGGGAGGAGATGATCCTGACCAATTTCATCGGCCACAAACCCTCGGAACGCTGGTT GGAATGTGCCTACGAAGCGGAGGGTCCCCTCTATCTGCTCACCATGTCACTAGCGTTGCA CACGCCCGACCTGTGGTCACGCCACAAGCTGGTACATCTGCAGAGGTTGATTGTGATCGC TCATGCCCGACACGTAAGCCCGAACTCCGTCTGCAAGTTCCTTGCGCCTGCCGATAAGCA TCCAAAGGATTACACGATCTACAAACCGTATCTGATGTTCTGGGGGCTTGTCGATTTGAT CTATTGCAACTTTTTCCGTACCGTCACAACGCCGAAGGACGAAGATTGGCCGATCTCGCT GTTCAACTACATTCGCCGAAACGACGAGTCCCTTCTCAAGACGGCCGACACCACACTGCA AACATTCACGGAGGAATACTTACCGTGCGCTTCGTTTGGCGAATTTTGTGACGTGGCAGG TCTGCTCGGAGAAATAGAAAATCCAGATGCGTGGATGGAGGACCTGTTGCAAGCGTTGCC AGCACCGGGCGGTGGTTCATCTGCTGGAGGATCAAGTGCAGCAGGTTCAAGCGGTGGAAC CGGCCCGGCGGGAGCTGCATCAGGATCGAGCGGTGCAGAATGAAGATACTCGGCCGGATC ATTAAATGAGAAGCGTTGCTGGCGGCTAGCTTAATGGATTTTGTCATTGGCTCATTTGGC GCCCCACTACGCACGTATTTTAGTCGAGTGTGAAACGCTTTACATTATGCTGTAGCGCAC ATAGTTGCATGCGAACTTATAATATTGGCCCATCGTAAACTGATGAAGATTGGGACGGTA GCACATATGCATATTTATCTTCAATATAATCTTTATCAATGCTTTCATACATATATAAAT TGTTTTGTCATCAAATGGTGTTAATTGAAATAAATTAAAAGGTATT



consensusID : consensus_8719#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 613
fasta sequence
                              [CCGCGGACGCGTGGGGGCGACCCGAGAGAAGCAGCTGGACGCGCTTGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGA-CCGG-CTACACCACGGTAA-CACAC--TTCAACGTTGTACACGTGGACT-GTCACATGAATGCAATCAG-ATTAGCTCGATCGCGCGATGAATGGGAAAGCGCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTCGGGCCCGGACGTAAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCTGGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTATCTGCTGTTTTAT]

[+] EMBL BM595749             [CCGCGGACGCGTGGGGGCGACCCGAGAGAAGCAGCTGGACGCGCTTGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGA CCGG CTACACCACGGTAA CACAC  TTCAACGTTGTACACGTGGACT GTCACATGAATGCAATCAG ATTAGCTCGATCGCGCGATGAATGGGAAAGCGCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTCGGGCCCGGACGTAAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCTGGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTATCTGCTGTTTTAT]
[+] EMBL AL934921             [                                                                                                                                                                                                                                                 AAAACGACCCGGCCTACACCACGGTAAGCACACGTTTCAACGTTGTACACGTGGACTGGTCACATGAATGCAATCAGAATTAGCTCGATCGCGCGATGAATGGGAAAGCGCCTCGCTGCAGAACGCCAACA                                                                                                                                                                                                                                                        ]


>consensus_8719#1 CCGCGGACGCGTGGGGGCGACCCGAGAGAAGCAGCTGGACGCGCTTGGAATGCGTACAAA CGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGCGCGA AGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGT ACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAA GAAAACGACCGGCTACACCACGGTAACACACTTCAACGTTGTACACGTGGACTGTCACAT GAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGCGCCTCGCTGCAGAACGC CAACACCCGTTGCAACGGATTGCTTCCACTGTCGGGCCCGGACGTAAGTGAGTCTTCGTT CTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAAT CACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAA GAGCTTCCACGAGGATGCTGGCGGTGGTGGTCCACAGTCGAACATGCATTTGGTCGCTTA TCTGCTGTTTTAT



consensusID : consensus_8719#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence
                              [AAGGATCCCACGATNTAGCAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGTCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGACCGGCTACACCACGGGTAACACACTTCAACGTTGTACACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATTAATGGGAAAGCGCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTAAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGC]

[+] EMBL AL696333             [AAGGATCCCACGATNTAGCAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGTCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGAAAACGACCGGCTACACCACGGGTAACACACTTCAACGTTGTACACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATTAATGGGAAAGCGCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTAAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGC]


>consensus_8719#2 AAGGATCCCACGATNTAGCAAGGGTTCAATCCTGTCGCAGATTGAGAAACTGTCGCGAAG AGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCTGCCAGCCAAACAAGGTAC TGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGTTTGAGATGAAGCAGAAGA AAACGACCGGCTACACCACGGGTAACACACTTCAACGTTGTACACGTGGACTGTCACATG AATGCAATCAGATTAGCTCGATCGCGCGATTAATGGGAAAGCGCCTCGCTGCAGAACGCC AACACCCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGACGTAAGTGAGTCTTCGTTC TCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGCACGCAACGGTGTGAAATC ACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGGCGCTTTGCTCAAGAAAAG AGCTTCCACGAGGATGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8719#0      CCGGGAAGCGCTGTGCACAGAACCAGCGACGGCCAAACGCGTACAGGAAGTGCGCGATTT 60
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      TACACGCGCCGAAAAGAAGCGACTAGCAATGGCGACCCGAGAGAAGCAGCTGGACGCGCT 120
consensus_8719#1      ---------------CCGCGGACGCGTGGGGGCGACCCGAGAGAAGCAGCTGGACGCGCT 45
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      TGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGAT 180
consensus_8719#1      TGGAATGCGTACAAACGAAAAGGGACAGGTAACGGCAAAGGGTTCAATCCTGTCGCAGAT 105
consensus_8719#2      -----------------AAGGATCCCACGATNTAGCAA-GGGTTCAATCCTGTCGCAGAT 42
                                       **      ** *     **** *********************

consensus_8719#0      TGAGAAACTG-CGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCT 239
consensus_8719#1      TGAGAAACTG-CGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCT 164
consensus_8719#2      TGAGAAACTGTCGCGAAGAGACGGGATTGGCGTGCTTTATTTGTCGCGAAGGATACGCCT 102
                      ********** *************************************************

consensus_8719#0      GCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGT 299
consensus_8719#1      GCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGT 224
consensus_8719#2      GCCAGCCAAACAAGGTACTGGGCATCTACACCTTCTCCAAGCGCGCCAACGTGGAGGAGT 162
                      ************************************************************

consensus_8719#0      TTGAGATGAAGCAGAAGAAAACGACCGGCTATACCACGG-TAACACACTTCAACGTTGTA 358
consensus_8719#1      TTGAGATGAAGCAGAAGAAAACGACCGGCTACACCACGG-TAACACACTTCAACGTTGTA 283
consensus_8719#2      TTGAGATGAAGCAGAAGAAAACGACCGGCTACACCACGGGTAACACACTTCAACGTTGTA 222
                      ******************************* ******* ********************

consensus_8719#0      CACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGT 418
consensus_8719#1      CACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATGAATGGGAAAGC 343
consensus_8719#2      CACGTGGACTGTCACATGAATGCAATCAGATTAGCTCGATCGCGCGATTAATGGGAAAGC 282
                      ************************************************ ********** 

consensus_8719#0      GCCTCGCTGCAGAACGCCAACACGCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGAC 478
consensus_8719#1      GCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTCGGGCCCGGAC 403
consensus_8719#2      GCCTCGCTGCAGAACGCCAACACCCGTTGCAACGGATTGCTTCCACTGTGGGGCCCGGAC 342
                      *********************** ************************* **********

consensus_8719#0      GTGAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGC 538
consensus_8719#1      GTAAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGC 463
consensus_8719#2      GTAAGTGAGTCTTCGTTCTCATCGTCGATGGCACGCCACAACACCTACATGCAGGAGTGC 402
                      ** *********************************************************

consensus_8719#0      ACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGG 598
consensus_8719#1      ACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGG 523
consensus_8719#2      ACGCAACGGTGTGAAATCACGTTCGCTAGCTCGATGCACGATCTGAAGCTGCTGCTTTGG 462
                      ************************************************************

consensus_8719#0      CGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCTGGCGGTGGTGGTCCACAGTCGAAC 658
consensus_8719#1      CGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGCTGGCGGTGGTGGTCCACAGTCGAAC 583
consensus_8719#2      CGCTTTGCTCAAGAAAAGAGCTTCCACGAGGATGC------------------------- 497
                      ***********************************                         

consensus_8719#0      ATGCATTTGGTCGCTTATCTGCTGTTTTATGGACTGTACACGTTGCTCTCGTCTCGGTCA 718
consensus_8719#1      ATGCATTTGGTCGCTTATCTGCTGTTTTAT------------------------------ 613
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      TACTCGCGGGAGGAGATGATCCTGACCAATTTCATCGGCCACAAACCCTCGGAACGCTGG 778
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      TTGGAATGTGCCTACGAAGCGGAGGGTCCCCTCTATCTGCTCACCATGTCACTAGCGTTG 838
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      CACACGCCCGACCTGTGGTCACGCCACAAGCTGGTACATCTGCAGAGGTTGATTGTGATC 898
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      GCTCATGCCCGACACGTAAGCCCGAACTCCGTCTGCAAGTTCCTTGCGCCTGCCGATAAG 958
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      CATCCAAAGGATTACACGATCTACAAACCGTATCTGATGTTCTGGGGGCTTGTCGATTTG 1018
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      ATCTATTGCAACTTTTTCCGTACCGTCACAACGCCGAAGGACGAAGATTGGCCGATCTCG 1078
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      CTGTTCAACTACATTCGCCGAAACGACGAGTCCCTTCTCAAGACGGCCGACACCACACTG 1138
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      CAAACATTCACGGAGGAATACTTACCGTGCGCTTCGTTTGGCGAATTTTGTGACGTGGCA 1198
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      GGTCTGCTCGGAGAAATAGAAAATCCAGATGCGTGGATGGAGGACCTGTTGCAAGCGTTG 1258
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      CCAGCACCGGGCGGTGGTTCATCTGCTGGAGGATCAAGTGCAGCAGGTTCAAGCGGTGGA 1318
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      ACCGGCCCGGCGGGAGCTGCATCAGGATCGAGCGGTGCAGAATGAAGATACTCGGCCGGA 1378
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      TCATTAAATGAGAAGCGTTGCTGGCGGCTAGCTTAATGGATTTTGTCATTGGCTCATTTG 1438
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      GCGCCCCACTACGCACGTATTTTAGTCGAGTGTGAAACGCTTTACATTATGCTGTAGCGC 1498
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      ACATAGTTGCATGCGAACTTATAATATTGGCCCATCGTAAACTGATGAAGATTGGGACGG 1558
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      TAGCACATATGCATATTTATCTTCAATATAATCTTTATCAATGCTTTCATACATATATAA 1618
consensus_8719#1      ------------------------------------------------------------
consensus_8719#2      ------------------------------------------------------------
                                                                                  

consensus_8719#0      ATTGTTTTGTCATCAAATGGTGTTAATTGAAATAAATTAAAAGGTATT 1666
consensus_8719#1      ------------------------------------------------
consensus_8719#2      ------------------------------------------------
                                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)