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Anopheles gambiae
cluster # 8725 cluster # 8725       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8725#0 length = 1733 sequences # 9  
consensus_8725#1 length = 751 sequences # 1  
consensus_8725#2 length = 491 sequences # 1  
consensus_8725#3 length = 280 sequences # 1  

consensusID : consensus_8725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1733
fasta sequence
                              [TTTGTACGTCTAGAATTTATTCTTCATGTGCAGCTCAATCGTTCTTCGCTACCTTAAATGACACACCCGATGGAATAAGTAAAGATGGAAATGCATCTCCTGCCTACCCTCCCTTTCAATTACTCTCCACCTCCATCGCTTGTGCCTGCTGTCCTTCCGCCTTCGAGCAAGCTGTCGTCATAGAACAAATACTCATCCTGATATTCCTTCAAAATCTTGCTCGACCGCTTCTCGTCCAGGAACAGCGAGTACACCTTCCGGATGTCTTCCACCATAATTTCCGCTGCCTTGCGCCGTTTGCTCACCAGACTGGCCGTCGTGATGGATTGAATTGCGTACCGCAGGCTTGTCTCCGTCGCAATGCGCCCAAGCACCATCAGCGCATCGTTGTTGATCTGGCAGTCTTCCTCCTCGCAGCGAATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATACGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAGCACGCCCGGGTTTATCTCCGCCTTGCCCTCTTCGCGCCATTCGATCACCTTGCTGTGGATCTGGTCCCGTACCTCCTGCTTTATTTCACCCGTATCGCCCGAAAACAGTGCCAAGAAACCGTGCGTCCGGCTGTTAATGACGTCGATTTCGTGCAA-GATACCGTGTGCACCACCTCCTTGCGCTTTTGCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAA-TCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCTCTTTAATCCTCAG-C-CCGATGCTTTTACGCAGCGCCTGCGACAGTGCCTCG-GTTTTGTTCATCTCGAGCGAATAAATCTCCGATCCGGACATGCTAGTGAACGGTGTCTCGTTGCCCAGTGCCTGCGCCATGCCGACGGCGATGGCCGTCTTGCCCGTACTTGGTTCGCCCGCCAGCAGAATGCA-CCGA-CCGGCAATTTTTCCTTCCCGTACCATTTGCACCACAATTCCGGCGGCTCGGCGTGCTTCCTTCTGGCCGACCATA-CCCTGGGACACGGTTCGCGCTTCCAGCACATCGTCCAGCCCGAGACCGCGAATGTGCGAGTGGGCCCCGATACGCTCGATACGGGTCACATCCCGGATTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTCGAGCGGAAAACTTCGCAGCAAACAATGCCGAAAGCGAGTGTCTCGTTACCGTAGCAACAAAACAACCGATGAAGGTTCACCTAAAAATGAGATATTTATCAACGTATTCCACGAATATACGCGATTATGGCAAAAAATCTTCGTTTTCGGCAGAAAATACAACGCGGGCACAACTCTCGGACGCTCTTCGG]

[-] EMBL BX614034             [TTTGTACGTCTAGAATTTATTCTTCAAATGCAGGTCAATCGATCTTCGCTACCTTAAATGACACACCCGATGGAATAAGTAAAGATGGAAATGTATCTCCTGCCTACCCTCCCTTTCAGTTACTCTCCACCTCCATCGCTTGCGCCTGCTGTCCTTCCGCCTTCGA CAAGCTGTCGTCATAGAACAAATACTCATCCTGATATTCCTTCAAAATCTTGCTCGACCGCTTCTCGTCCAGGAACAGCGAGTACACCTTCCGGATGTCTTCCACCATAATTTCCGCTGCCTTGCGCCGTTTGCTCACCAGACTGGCCGTCGTGATGGATTGAATTGCGTACCGCAGGCTTGTCTCCGTCGCAATGCGCCCAAGCACCATCAGCGCATCGTTGTTGATCTGGCAGTCTTCCTCCTCGCAGCGAATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATACGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGATAGTGTGTGCCGCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08ZY7             [  TGTACGTCTAGAATTTATTCTTCATGTGCAGCTCAATCGTTCTTCGCTACCTTAAATGACACACCCGATGGAATAAGTAAAGATGGAAATGCATCTCCTGCCTACCCTCCCTTTCAATTACTCTCCACCTCCATCGCTTGTGCCTGCTGTCCTTCCGCCTTCGAGCAAGCTGTCGTCATAGAACAAATACTCATCCTGATATTCCTTCAAAATCTTGCTCGACCGCTTCTCGTCCAGGAACAGCGAGTACACCTTCCGGATGTCTTCCACCATGATTTCCGCTGCCTTGCGCCGTTTACTCACCAGACTGGCCGTCGTGATGGATTGAATTGCGTACCGCA GCTTGTCTCCGTCGCAATGCGCCCAAGCATCATCAGCGCATCGTTGTTGATCTGGCAGTCTTCCTCCTCGCAGCGAATCTTCAGAATCTCCT   TCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATACGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAGCACGCCCGGGTTTATCTCCGCCTTGCCCTCTTCGCGCCATTCGATCACCTTGCTGTGGATCTGGTCCCGTACCTCCTGCTTTATTTCACCCGTATCGCCCGAAAACAGTGCCAAGAAACCGTGCGTCCGGCTGTTAATGACGTCGATTTCGTGCAA GATACCGTGTGCACCACCTCCTTGCGCTTTTGCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAA TCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08XMN             [      CGTCTAGAATTTATTCTTCATGTGCAGCTCAATCGTTCTTCGCTACCTTAAATGACACACCCGATGGAATAAGTAAAGATGGAAATGCATCTCCTGCCTACCCTCCCTTTCAATTACTCTCCACCTCCATCGCTTGTGCCTGCTGTCCTTCCGCCTTCG GCAAGCTGTCGTCATAGAACAAATACTCATCCTGATATTCCTTCAAAATCTTGCTCGACCGCTTCTCGTCCAGGAACAGCGAGTACACCTTCCGGATGTCTTCCACCATGATTTCCGCTGCCTTGCGCCGTTTACTCACCAGACTGGCCGTCGTGATGGATTGAATTGCGTACCGCA GCTTGTCTCCGTCGCAATGCGCCCAAGCACCATCAGCGCATCGTTGTTGATCTGGCAGTCTTCCTCCTCGCAGCGAATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATACGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTCCCGCGGATTTTCGTAATGCCACGATTCGTgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BX614035             [                                                                                                                                                                                                                                   CTTCTCGTCCAGGAACAGCGAGTACCCCTTCCGGATGTCTTCCACCATAATTTCCGCTGCCTTGCGCCGTTTGCTCACCAGACTGGCCGTCGTGATGGATTGAATTGCGTACCGCAGGCTTGTCTCCGTCGCAATGCGCCCAAGCACCTTCAGCGCATCGTTGTTGTTCTGGCAGTCTTCCTCCTCGCAGCGAATCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BM617094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAGCACGCCCGGGTTTATCTCCGCCTTGCCCTCTTCGCGCCATTCGATCACCTTGCTGTTGATCTGGTCCCGTACCTCCTGCTTTATTTCACCCGTATCGCCCGAAAACAGTGCCAAGAAACCGTGCGTCCGGCTGTTAATGACGTCGATTTCGTGCAACGATACCGTGTGCACCACCTCCTTGCGCTTTTGCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAA TCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTTTGGCCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08QYY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAA TCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGTTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCTCTTTAATCCTCAGACACCGATGCTTTTACGCAGCGCCTGCGACAGTGCCTCG GTTTTGTTCATTTCGAGCGAATAAATCTCCGATCCGGACATGCTAGTGAACGGTGTCTCGTTGCCCAGTGCCTGCGCCATGCCGACGGCGATGGCCGTCTTGCCCGTACTTGGTTCGCCCGCCAGCAGAATGCA CCGA CCGGCAATTTTTCCTTCCCGTACCATTTGCACCACAATTCCGGCGGCTCGGCGTGCTTCCTTCTGGCCGACCATACCCCTGGGACACGGTTCGCGCTTCCAGCACATCGTCCAGCCCGAGACCGCGAATGTGCGAGTGGGCCCCGATACGCTCGATACGGGTCACATCCCGGATTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTCGAGCGGAAAACTTCGCAGCAAACAATGCCGAAAGCGAGTGTCTCGTTACCGTAGCAACAAAACAACCGATGAAGGTTCACCTAAAAATGAGATATTTATCAACGTATTCCACGAATATACGCGATTATGGCAAAAAATatcg                                                 ]
[-] EMBL CNS08XMM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCTGCGAGCCGGTCGCATCGTAATTCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCTCTTTAATCCTCAG C CCGATGCTTTTACGCAGCGCCTGCGACAGTGCCTCG GTTTTGTTCATCTCGAGCGAATAAATCTCCGATCCGGACATGCTAGTGAACGGTGTCTCGTTGCCCAGTGCCTGCGCCATGCCGACGGCGATGGCCGTCTTGCCCGTACTTGGTTCGCCCGCCAGCAGAATGCA CCGA CCGGCAATTTTTCCTTCCCGTACCATTTGCACCACAATTCCGGCGGCTCGGCGTGCTTCCTTCTGGCCGACCATA CCTTGGGACACGGTTCGCGCTTCCAGCACATCGTCCAGCCCGAGACCGCGAATGTGCGAGTGGGCCCCGATACGCTCGATACGGGTCACATCCCGGATTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTCGAGCGGAAAACTTCGCAGCAAACAATGCCGAAAGCGAGTGTCTCGTTACCGTAGCAACAAAACAACCGATGAAGGTTCACCTAAAAATGAGATATTTATCAACGTATTCCACGAATATACGCGATTATGGCAAAAAATCTTCGTTTTCGGCAGAAAATACAACGCGGGCACA                   ]
[-] EMBL CNS08ZY6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGTCTCCATGCCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCTCTTTAATCCTCAG C CCGATGCTTTTACGCAGCGCCTGCGACAGTGCCTCGTGTTTTGTTCATCTCGAGCGAATAAATCTCCGATCCGGACATGCTAGTGAACGGTGTCTCGTTGCCCAGTGCCTGCGCCATGCCGACGGCGATGGCCGTCTTGCCCGTACTTGGTTCGCCCGCCAGCAGAATGCATCCGATCCGGCAATTTTTCCTTCCCGTACCATTTGCACCACAATTCCG                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BM575255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCTCGCCCTCGATGATTTCCGTCTCCTCTTTAATCCTCAG C CCGATGCTTTTACGCAGCGCCTGCGACAGTGCCTCG GTTTTGTTCATCTCGAGCGAATAAATCTCCGATCCGGACATGCTAGTGAACGGTGTCTCGTTGCCCAGTGCCTGCGCCATGCCGACGGCGATGGCCGTCTTGCCCGTACTTGGTTCGCCCGCCAGCAGAATGCA CCGA CCGGCAATTTTTCCTTCCCGTACCATTTGCACCACAATTCCGGCGGCTCGGCGTGCTTCCTTCTGGCCGACCATA CCCTGGGACACGGTTCGCGCTTCCAGCACATCGTCCAGCCCGAGACCGCGAATGTGCGAGTGGGCCCCGATACGCTCGATACGGGTCACATCCCGGATTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTCGAGCGGAAAACTTCGCAGCAAACAATGCCGAAAGCGAGTGTCTCGTTACCGTAGCAACAAAACAACCGATGAAGGTTCACCTAAAAATGAGATATTTATCAACGTATTCCACGAATATACGCGATTATGGCAAAAAATCTTCGTTTTCGGCAGAAAATACAACGCGGGCACAACTCTCGGACGCTCTTCGG]


>consensus_8725#0 TTTGTACGTCTAGAATTTATTCTTCATGTGCAGCTCAATCGTTCTTCGCTACCTTAAATG ACACACCCGATGGAATAAGTAAAGATGGAAATGCATCTCCTGCCTACCCTCCCTTTCAAT TACTCTCCACCTCCATCGCTTGTGCCTGCTGTCCTTCCGCCTTCGAGCAAGCTGTCGTCA TAGAACAAATACTCATCCTGATATTCCTTCAAAATCTTGCTCGACCGCTTCTCGTCCAGG AACAGCGAGTACACCTTCCGGATGTCTTCCACCATAATTTCCGCTGCCTTGCGCCGTTTG CTCACCAGACTGGCCGTCGTGATGGATTGAATTGCGTACCGCAGGCTTGTCTCCGTCGCA ATGCGCCCAAGCACCATCAGCGCATCGTTGTTGATCTGGCAGTCTTCCTCCTCGCAGCGA ATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATA CGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTC GTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGG TTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAGCACGCCC GGGTTTATCTCCGCCTTGCCCTCTTCGCGCCATTCGATCACCTTGCTGTGGATCTGGTCC CGTACCTCCTGCTTTATTTCACCCGTATCGCCCGAAAACAGTGCCAAGAAACCGTGCGTC CGGCTGTTAATGACGTCGATTTCGTGCAAGATACCGTGTGCACCACCTCCTTGCGCTTTT GCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGC GTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGA TGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGAT CGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGC CCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCT CTTTAATCCTCAGCCCGATGCTTTTACGCAGCGCCTGCGACAGTGCCTCGGTTTTGTTCA TCTCGAGCGAATAAATCTCCGATCCGGACATGCTAGTGAACGGTGTCTCGTTGCCCAGTG CCTGCGCCATGCCGACGGCGATGGCCGTCTTGCCCGTACTTGGTTCGCCCGCCAGCAGAA TGCACCGACCGGCAATTTTTCCTTCCCGTACCATTTGCACCACAATTCCGGCGGCTCGGC GTGCTTCCTTCTGGCCGACCATACCCTGGGACACGGTTCGCGCTTCCAGCACATCGTCCA GCCCGAGACCGCGAATGTGCGAGTGGGCCCCGATACGCTCGATACGGGTCACATCCCGGA TTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTCGAGCGGAAAACTTCGCAG CAAACAATGCCGAAAGCGAGTGTCTCGTTACCGTAGCAACAAAACAACCGATGAAGGTTC ACCTAAAAATGAGATATTTATCAACGTATTCCACGAATATACGCGATTATGGCAAAAAAT CTTCGTTTTCGGCAGAAAATACAACGCGGGCACAACTCTCGGACGCTCTTCGG



consensusID : consensus_8725#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 751
fasta sequence
                              [CGTGCCCCTTTACTCACCAGANTGCCCGTCGTATGGAATGTAATTGCGTACCGCAGGTCTGTCTCCCGTCTCATGCGCCCAAGCACCATCCAGCGGCATCGTTGTTGATCTGGCAGTCGTTCACTCCTGGCACCGAATCTTTCAGAATCGTCCGTGTAATCTTCCTTCTCCCGTGGTAGGAACGGTTGCCGAATGAATAATGAAGACGAGTCGGAGCAAATCGATCGGGATCNCCGTGCGGTCTGCGGGTAGTGTGTGCCCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAAGCACGCCCGGGTTTATCTCCGCCTTGCCCTCTTCAGCGCCATTCGATCACCTTGCTGTTGATCTGGTCCCGTACCTCCTGCTTGATTTCACCCGTATCGCCNCGAAAAGCAGTGCCAAGAAACCGTGCGTCCGGCTGTTAATGACGTNGATTTCGTGCAACGATACCGTGTGCACCACNTCCTTGCGCTTTTGCAACTCCCCTCGGGACACTGCACGAGAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCNTGNTCTTCTCCGTGATGAAGCACTNGATGATTAACTGGGGGAT]

[-] EMBL AL932938             [CGTGCCCCTTTACTCACCAGANTGCCCGTCGTATGGAATGTAATTGCGTACCGCAGGTCTGTCTCCCGTCTCATGCGCCCAAGCACCATCCAGCGGCATCGTTGTTGATCTGGCAGTCGTTCACTCCTGGCACCGAATCTTTCAGAATCGTCCGTGTAATCTTCCTTCTCCCGTGGTAGGAACGGTTGCCGAATGAATAATGAAGACGAGTCGGAGCAAATCGATCGGGATCNCCGTGCGGTCTGCGGGTAGTGTGTGCCCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAAGCACGCCCGGGTTTATCTCCGCCTTGCCCTCTTCAGCGCCATTCGATCACCTTGCTGTTGATCTGGTCCCGTACCTCCTGCTTGATTTCACCCGTATCGCCNCGAAAAGCAGTGCCAAGAAACCGTGCGTCCGGCTGTTAATGACGTNGATTTCGTGCAACGATACCGTGTGCACCACNTCCTTGCGCTTTTGCAACTCCCCTCGGGACACTGCACGAGAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCNTGNTCTTCTCCGTGATGAAGCACTNGATGATTAACTGGGGGAT]


>consensus_8725#1 CGTGCCCCTTTACTCACCAGANTGCCCGTCGTATGGAATGTAATTGCGTACCGCAGGTCT GTCTCCCGTCTCATGCGCCCAAGCACCATCCAGCGGCATCGTTGTTGATCTGGCAGTCGT TCACTCCTGGCACCGAATCTTTCAGAATCGTCCGTGTAATCTTCCTTCTCCCGTGGTAGG AACGGTTGCCGAATGAATAATGAAGACGAGTCGGAGCAAATCGATCGGGATCNCCGTGCG GTCTGCGGGTAGTGTGTGCCCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCA CCGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCA TGTGGCACTCGTCGATAAACAAGCACGCCCGGGTTTATCTCCGCCTTGCCCTCTTCAGCG CCATTCGATCACCTTGCTGTTGATCTGGTCCCGTACCTCCTGCTTGATTTCACCCGTATC GCCNCGAAAAGCAGTGCCAAGAAACCGTGCGTCCGGCTGTTAATGACGTNGATTTCGTGC AACGATACCGTGTGCACCACNTCCTTGCGCTTTTGCAACTCCCCTCGGGACACTGCACGA GAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGCGTGCTCGCGTAAAGCTACGGCCCAAC TTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCNTGNTCTTCTCCG TGATGAAGCACTNGATGATTAACTGGGGGAT



consensusID : consensus_8725#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 491
fasta sequence
                              [CCTCCTCGCAGCGAATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATACGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTCGTAATGCCACGATTCGTGCAACGATACCGTGTGCACCACCTCCTTGCGCTTTTGCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCTCTTT]

[+] EMBL CNS08QYZ             [CCTCCTCGCAGCGAATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATACGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTCGTAATGCCACGATTCGTGCAACGATACCGTGTGCACCACCTCCTTGCGCTTTTGCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCTCTTT]


>consensus_8725#2 CCTCCTCGCAGCGAATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGC GAATGATAATCATACGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTG TGCCGCGGATTTTCGTAATGCCACGATTCGTGCAACGATACCGTGTGCACCACCTCCTTG CGCTTTTGCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCG TAATCGCGTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCG ATGGTGATGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTG CCAAGATCGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGG CCCGTGCCCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCC GTCTCCTCTTT



consensusID : consensus_8725#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 280
fasta sequence
                              [GGTCACATCCCGGATTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTGGAGAGGAAAACTTAGCAGCAAACAATGCAGAAAGCGAGTGTGTAGTTGCCGTAGCAACAAAACAACCGATGAAGGTTCTAGAATGAAAAGTGAAGCCCACATAAAAATGAGATATTTATCAAGGTATTCCACGAATATACGCGATTATGGCAAAAAATATTCGTTTTCGGCAGAAAATACAACGCGGGCACAACTGTCGGACGCTCTTCCGGACGCGTGGGCGG]

[-] EMBL BM637382             [GGTCACATCCCGGATTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTGGAGAGGAAAACTTAGCAGCAAACAATGCAGAAAGCGAGTGTGTAGTTGCCGTAGCAACAAAACAACCGATGAAGGTTCTAGAATGAAAAGTGAAGCCCACATAAAAATGAGATATTTATCAAGGTATTCCACGAATATACGCGATTATGGCAAAAAATATTCGTTTTCGGCAGAAAATACAACGCGGGCACAACTGTCGGACGCTCTTCCGGACGCGTGGGCGG]


>consensus_8725#3 GGTCACATCCCGGATTTCAATCTTCTCCAGATCCGTCATACTTGGCGAGTGCTTTGGAGA GGAAAACTTAGCAGCAAACAATGCAGAAAGCGAGTGTGTAGTTGCCGTAGCAACAAAACA ACCGATGAAGGTTCTAGAATGAAAAGTGAAGCCCACATAAAAATGAGATATTTATCAAGG TATTCCACGAATATACGCGATTATGGCAAAAAATATTCGTTTTCGGCAGAAAATACAACG CGGGCACAACTGTCGGACGCTCTTCCGGACGCGTGGGCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8725#0      TTTGTACGTCTAGAATTTATTCTTCATGTGCAGCTCAATCGTTCTTCGCTACCTTAAATG 60
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      ACACACCCGATGGAATAAGTAAAGATGGAAATGCATCTCCTGCCTACCCTCCCTTTCAAT 120
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TACTCTCCACCTCCATCGCTTGTGCCTGCTGTCCTTCCGCCTTCGAGCAAGCTGTCGTCA 180
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TAGAACAAATACTCATCCTGATATTCCTTCAAAATCTTGCTCGACCGCTTCTCGTCCAGG 240
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      AACAGCGAGTACACCTTCCGGATGTCTTCCACCATAATTTCCGCTGCCTTGCGCCGTTTG 300
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CTCACCAGACTGGCCGTCGTGATGGATTGAATTGCGTACCGCAGGCTTGTCTCCGTCGCA 360
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      ATGCGCCCAAGCACCATCAGCGCATCGTTGTTGATCTGGCAGTCTTCCTCCTCGCAGCGA 420
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      ATCTTCAGAATCTCCTTAATCTCCTTCTCCGTGTACGGAACGGTGCGAATGATAATCATA 480
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CGATCGAGCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTC 540
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GTAATGCCACGATTCGTTGCCATCACCACCACCGGTGCCATATCGCTCTCCAGCGCCCGG 600
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TTCAGGAAGGAGAAACACTCAATGTCCAGCATGTGGCACTCGTCGATAAACAGCACGCCC 660
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GGGTTTATCTCCGCCTTGCCCTCTTCGCGCCATTCGATCACCTTGCTGTGGATCTGGTCC 720
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CGTACCTCCTGCTTTATTTCACCCGTATCGCCCGAAAACAGTGCCAAGAAACCGTGCGTC 780
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CGGCTGTTAATGACGTCGATTTCGTGCAAGATACCGTGTGCACCACCTCCTTGCGCTTTT 840
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GCAACTCCCCCTCGGGACACTGCACGAAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGC 900
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GTGCTCGCGTAAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGA 960
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TGATATCACCCGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGAT 1020
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CGTAGTTCGTCTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGC 1080
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      -----------------------------------------------------------C 1
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CCGTTGCTGGCCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCT 1140
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      GTGCCCCTTTACTCACCAGANTGCCCGTCGTATGGAATGTAATTGCGTACCGCAGGTCTG 61
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CTTTAATCCTCAGCCCGATGCTTTTACGCAGCGCCTGCGACAGTGCCTCGGTTTTGTTCA 1200
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      TCTCCCGTCTCATGCGCCCAAGCACCATCCAGCGGCATCGTTGTTGATCTGGCAGTCGTT 121
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TCTCGAGCGAATAAATCTCCGATCCGGACATGCTAGTGAACGGTGTCTCGTTGCCCAGTG 1260
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      CACTCCTGGCACCGAATCTTTCAGAATCGTCCGTGTAATCTTCCTTCTCCCGTGGTAGGA 181
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CCTGCGCCATGCCGACGGCGATGGCCGTCTTGCCCGTACTTGGTTCGCCCGCCAGCAGAA 1320
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ACGGTTGCCGAATGAATAATGAAGACGAGTCGGAGCAAATCGATCGGGATCNCCGTGCGG 241
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TGCACCGACCGGCAATTTTTCCTTCCCGTACCATTTGCACCACAATTCCGGCGGCTCGGC 1380
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      TCTGCGGGTAGTGTGTGCCCGGATTTTCGTAATGCCACGATTCGTTGCCATCACCACCAC 301
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GTGCTTCCTTCTGGCCGACCATACCCTGGGACACGGTTCGCGCTTCCAGCACATCGTCCA 1440
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      CGGTGCCATATCGCTCTCCAGCGCCCGGTTCAGGAAGGAGAAACACTCAATGTCCAGCAT 361
consensus_8725#2      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GCCCGAGACCGCGAATGTGCGAGTGGGCCCCGATACGCTCGATACGGGTCACATCC-CGG 1499
consensus_8725#3      ----------------------------------------------GGTCACATCC-CGG 13
consensus_8725#1      GTGGCACTCGTCGATAAACAAGCACGCCCGGGTTTATCTCCGCCTTGCCCTCTTCAGCGC 421
consensus_8725#2      --------------------------------------CCTCCTCGCAGCGAATCTTCAG 22
                                                                       *   **  *  

consensus_8725#0      ATT----TCAATCTTCTC----CAGATCCG---TCATACTTG-GCGAGTGCTTTCGAGCG 1547
consensus_8725#3      ATT----TCAATCTTCTC----CAGATCCG---TCATACTTG-GCGAGTGCTTTGGAGAG 61
consensus_8725#1      CAT----TCGATCACCTTGCTGTTGATCTGGTCCCGTACCTC-CTGCTTGATTTCACCCG 476
consensus_8725#2      AATCTCCTTAATCTCCTT-CTCCGTGTACGGAACGGTGCGAATGATAATCATACGATCGA 81
                        *    *  ***  **         *  *      * *         *  *        

consensus_8725#0      GAAAACTTCGCAGCAAACAATGC--C--GAAAGCGAGTGTCTCGTTA-CCGTAGCAACAA 1602
consensus_8725#3      GAAAACTTAGCAGCAAACAATGC--A--GAAAGCGAGTGTGTAGTTG-CCGTAGCAACAA 116
consensus_8725#1      TATCGCCNCGAA--AAGCAGTGCCAA--GAAACCGTGCGTCCGGCTG-T--TAATGACGT 529
consensus_8725#2      GCAAATCGATCGGGATGCCGTGCGGACTGCGGTAGTGTGTGCCGCGGATTTTCGTAATGC 141
                                    *  *  ***     *     * * **   *       *    *   

consensus_8725#0      AACAAC-CGATGAAGGTTC--------------------ACCTAAAAATGAGA-TATTTA 1640
consensus_8725#3      AACAAC-CGATGAAGGTTCTAGAATGAAAAGTGAAGCCCACATAAAAATGAGA-TATTTA 174
consensus_8725#1      NGATTT-CGTGCAACGATACCGTGTGCA---CCACNTCCTTGCGCTTTTGCAA-CTCCCC 584
consensus_8725#2      CACGATTCGTGCAACGATACCGTGTGCA---CCACCTCCTTGCGCTTTTGCAACTCCCCC 198
                             **   ** * *                              **  *       

consensus_8725#0      TCAACGTATTCCACGAA----TATACGCGATTATGGCAAAAAATCTTCGTTT--TCGGCA 1694
consensus_8725#3      TCAAGGTATTCCACGAA----TATACGCGATTATGGCAAAAAATATTCGTTT--TCGGCA 228
consensus_8725#1      TCGGGACACTGCACGAGAGCGTGTCTGCGAGCCGGTCGCATCGTAATCGCGTGCTCGCGT 644
consensus_8725#2      TCGGGACACTGCACGAA-GCGTGTCTGCGAGCCGGTCGCATCGTAATCGCGTGCTCGCGT 257
                      **     * * *****     * *  ****    * *  *   *  ***  *  ***   

consensus_8725#0      GAAAATACAACGCGGGCACAAC----TCTCGGACGCTCTTCGG----------------- 1733
consensus_8725#3      GAAAATACAACGCGGGCACAAC----TGTCGGACGCTCTTCCGGACGCGTGGGCGG---- 280
consensus_8725#1      AAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACC 704
consensus_8725#2      AAAGCTACGGCCCAACTTCGACACCTTGCCGGACGCTTTGTCGATGGTGATGATATCACC 317
                       **  ***  * *     * **    *  ******** *   *                 

consensus_8725#0      ------------------------------------------------------------
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      CGCNTGN-TCTTCTCCGTGATGAAGCACTNGATGATTAACTGGGGGAT------------ 751
consensus_8725#2      CGCCTGGATCTTCTCCTTGATGAAGCACTCGATGATCTTGTTGCCAAGATCGTAGTTCGT 377
                                                                                  

consensus_8725#0      ------------------------------------------------------------
consensus_8725#3      ------------------------------------------------------------
consensus_8725#1      ------------------------------------------------------------
consensus_8725#2      CTCCATGTCCGTCGTTTTCATCGTCACTTTGCCCACCTTCTGGCCCGTGCCCGTTGCTGG 437
                                                                                  

consensus_8725#0      ------------------------------------------------------
consensus_8725#3      ------------------------------------------------------
consensus_8725#1      ------------------------------------------------------
consensus_8725#2      CCGATCGATCTGTATCTCGACCACCTCGCCCTCGATGATTTCCGTCTCCTCTTT 491
                                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)