These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8759#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2106 fasta sequence [CCGCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTGCGCAACGAAAAGGAAGTGGCCGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCGAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCACTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCG-TTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAGCAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAATGGCGGAATCGACGCAGCGCAATCAACTCTCCAGTCCTCCATCTGACATCGATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGACACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCGTCTGTACCGGGGCGTCCCGCTGGCAGTCAGCACTGAACAGTGCGCTGATGGAGAACCGCGAGTTCCATCGGACGATAGCGGAGCTGAGCGGATGGTTGGAGCAGACGGAGAACAAGATCAAGAGCTCGGAACCGATCGATCTGACCAGCGATCAGCGATTGGTGGAGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTAATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCA---CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGGNAAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATAAATATTGTATTGCCATTTTGTTTTTGCACATACATACATTAGCTAGATATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAGGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATTTTTTGCATTGTTTTGTTTTCAGCGCTGAAGTGGCATTCTTATGACGGTTTTATTTTA] [+] EMBL BM607709 [CCGCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTGCGCAACGAAAAGGAAGTGGCCGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCGAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCACTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCG TTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAGCAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAATGGCGGAATCGACGCAGCGCAATCAACTCTCCAGTCCTCCATCTGACATCGATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGACACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGA ] [+] EMBL BX620053 [ CATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAAGAAGCTTTCAGTGTGCGTGTGAAGGAAGAGACGGAGCGATATCATCGTTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAGCAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTTGCAATGGCGGAATCGACGCAGCGCAATCAACTCTCCAGCCCTCCATCCGACATCGATGCGCTGGAGGACACGATACAGGACCACCGTGAGTTCCTGCTCGATCTCGACAGCCACAAGAGCATCATCAAGTCGCTCAAAATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCGTCTGTACCGGGGCGTCCCGCTGGCAGTCAGCACTGAACAGTGCGCTGATGGAGAACCGCGAGTTCCATCGGACGATAGCGGAGCTGAGCGGATGGTTGGAGCAGACGGAGAACAAGATCAAGAGCTCGGAACCGATCGATCTGACCAGCGATCAGCGATTGGTGGAGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGAACTNCCAGCTGACAAAGTACGTCGATGCGAACAAGTCNG AAAGTTCGATGAAGTGTATGCNAAGCTGACTGA ] [+] EMBL BX629275 [ GCTGCGGGCGGATCTAATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCA CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACNAATACTCCCAGCAGTGCCTGGATAGCTCTTC AACATGGNAAAGAATGGCTATTTACACACTGTATGCTGT ] [+] EMBL BX629168 [ CGGGCGGATCTAATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCA CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACNAATACTCCCAGCAGTGCCTGGATAGCTCTTC AACATGGNAAAGAATGGCTATTTACACACTGTATG ] [+] EMBL BX617586 [ TTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACATCCACCAC CC CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAG AAATGGGGACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGGGAAAGAATGGCTATTTACACACTGTATGCTGTA ] [+] EMBL BX620540 [ ATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCACCCCAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGG AAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATAAATATTGTATTGCCATTTTGTTTTTGCACATACATACATTAGCTAGATATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAGGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTT ] [+] EMBL BM637126 [ ccGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCACCCCAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGG AAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATAAATATTGTATTGCCATTTTGTTTTTGCACATACATACATTAGCTAGATATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAGGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATTTTTTGCATTGTTTTGTTTTCAGCGCTGAAGTGGCATTCTTATGACGGTTTTATTTTA] consensusID : consensus_8759#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 707 fasta sequence [CCGGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGGTAGGTGCAAGCGAGGACGCATCTAGATGTGTCATTCTTTGAGGAATATATCTTGCCACCACCACCACCACCACCACCAATACCACCAAAACACCACCAAAAACCTATCCAACCTCTTATTATACCATCACCAACTATTCATCGCACACCGCCAACGAAGCTTTTGCTGTTGTCTTCGTCGTCGTCGTCGTCGACATCGTTACCACCAGTCGCGGGCTTACTGCGGCGGCGGTCTCAGTTTTGTTTGTTGCACACAGTCTGTTTGTCTAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGAT] [+] EMBL BM624887 [CCGGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGGTAGGTGCAAGCGAGGACGCATCTAGATGTGTCATTCTTTGAGGAATATATCTTGCCACCACCACCACCACCACCACCAATACCACCAAAACACCACCAAAAACCTATCCAACCTCTTATTATACCATCACCAACTATTCATCGCACACCGCCAACGAAGCTTTTGCTGTTGTCTTCGTCGTCGTCGTCGTCGACATCGTTACCACCAGTCGCGGGCTTACTGCGGCGGCGGTCTCAGTTTTGTTTGTTGCACACAGTCTGTTTGTCTAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGAT] consensusID : consensus_8759#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence [CCGGACACGCTCGGTGCGGGCCTAATCGAACGACACGCCAACAATAACACCATGACGGAGGACATTCGACAGAAGATGGCTGAATATCACGAGCTGGGCAATAGCGTCAAGACGCGCCTCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTACGCAACGAAAAGGAAGTGGCGGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCAAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCAGTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGATGGAAGAATCAAGGATCATTCCTAATGCTTACAATTTTAACTGCGTACACAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAA] [+] EMBL BM634893 [CCGGACACGCTCGGTGCGGGCCTAATCGAACGACACGCCAACAATAACACCATGACGGAGGACATTCGACAGAAGATGGCTGAATATCACGAGCTGGGCAATAGCGTCAAGACGCGCCTCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTACGCAACGAAAAGGAAGTGGCGGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCAAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCAGTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGATGGAAGAATCAAGGATCATTCCTAATGCTTACAATTTTAACTGCGTACACAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAA] consensusID : consensus_8759#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence [CGCGAGTTGTGAGTNTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAANNAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACCAGCAGGAGAGCCACCCAGCAAGATGGTAGCGGATNCCGANNACCCATCCCATCCACCAAGGCGTTNNGCCACCACGAAATTTCCCNGTAACCAANNCANTNNGGGCANGTGGCCAGANNGGGCCGACCGACGAATGGTCATCANCCCCCCACGATANTCNCGCANGCCTNTCGNATTCTTNGGGCGTGTCTCCGTGCCTGTTNCCCNTCCNGCGATGCTGTNNTTGCTGCTNGGNTGTGGTNNNCGCTTCATGGCCCCCCCGGGTGAAGGGAAGTTTCCTCCCTGGCAACCCCTTGGGCCAAAACCCAAAATTTTGGGC] [+] EMBL BX619245 [CGCGAGTTGTGAGTNTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAANNAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACCAGCAGGAGAGCCACCCAGCAAGATGGTAGCGGATNCCGANNACCCATCCCATCCACCAAGGCGTTNNGCCACCACGAAATTTCCCNGTAACCAANNCANTNNGGGCANGTGGCCAGANNGGGCCGACCGACGAATGGTCATCANCCCCCCACGATANTCNCGCANGCCTNTCGNATTCTTNGGGCGTGTCTCCGTGCCTGTTNCCCNTCCNGCGATGCTGTNNTTGCTGCTNGGNTGTGGTNNNCGCTTCATGGCCCCCCCGGGTGAAGGGAAGTTTCCTCCCTGGCAACCCCTTGGGCCAAAACCCAAAATTTTGGGC] consensusID : consensus_8759#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence [CTCTAAAAGCTCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAAGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATCTTTTGCATTGTTTTGTTTTCAGCGCTGAGGTGGCAT] [-] EMBL CNS08U30 [CTCTAAAAGCTCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAAGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATCTTTTGCATTGTTTTGTTTTCAGCGCTGAGGTGGCAT] consensusID : consensus_8759#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 223 fasta sequence [CCGCCCACGCGTCCGCAACTCTCCAGTCCTCCATCTGACATCTATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGCCACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCG] [+] EMBL BM655763 [CCGCCCACGCGTCCGCAACTCTCCAGTCCTCCATCTGACATCTATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGCCACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8759#0 CCGCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTGCGCAACGAAAAGGAAGT 60 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 GGCCGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGC 120 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGA 180 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 GGAAGCGATCGAAGCAATCAATGCGAACAACTTCATGTCGTCGACGCAGAACGTTTCCAA 240 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 AGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCT 300 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 TGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCACTGTGCGTGTGAAGGAAGAAACGGA 360 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 ACGATATCATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAG 420 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAA 480 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CGATCTGTGGCGCCTCGAGCAGTGGCTCGCAATGGCGGAATCGACGCAGCGCAATCAACT 540 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CTCCAGTCCTCCATCTGACATCGATGCGCTGGAGGACACAATACAGGACCACCGCGAGTT 600 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CCTGCTCGATCTCGACAGACACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACA 660 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 TCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAA 720 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 GAACAACCGCCGCTGGGATGCCGTCTGTACCGGGGCGTCCCGCTGGCAGTCAGCACTGAA 780 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CAGTGCGCTGATGGAGAACCGCGAGTTCCATCGGACGATAGCGGAGCTGAGCGGATGGTT 840 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 GGAGCAGACGGAGAACAAGATCAAGAGCTCGGAACCGATCGATCTGACCAGCGATCAGCG 900 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 ATTGGTGGAGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTAATGCGTTGCGA 960 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 GCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAA 1020 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCA 1080 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGA 1140 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGT 1200 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGA 1260 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 TGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACAT 1320 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 TGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCG 1380 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 ATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCT 1440 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTT 1500 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 TGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACC 1560 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 TGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCACAATCCAACATCCACATCC 1620 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 CTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTG 1680 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ------------------------------------------------------------ consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ------------------------------------------------------------ consensus_8759#3 ------------------------------------------------------------ consensus_8759#0 TGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATG 1740 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 -------------------------------------------CCGGACACGCTCGGTGC 17 consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ---CCGGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCC 57 consensus_8759#3 -----------------------------------------------------------C 1 consensus_8759#0 GNAAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATA 1800 consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 GGGCCTAATCGAACGACACGCCAACAATAACACCATGACGGAGGACATTCGACAGAAGAT 77 consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 GCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAA 117 consensus_8759#3 GCGAGTTGTGAGTNTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAA 61 consensus_8759#0 AATATTGTA-TTGCCATTTTGTTTTT--GCACATA-CATACATTAGCTAGAT--ATAGAT 1854 consensus_8759#4 -------CT-CTAAAAGCTCGGAATT--CCTCGAG-CAC-TGTTGGCCTACTGGATAGAT 48 consensus_8759#2 GGCTGAATA-TCACGAGCTGGGCAATAGCGTCAAGACGCGCCTCGATGCACTG-CTAACC 135 consensus_8759#5 -------------------------------------------------------CCGCC 5 consensus_8759#1 GTCGGAAAA-GTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACT 176 consensus_8759#3 GTCGGAANNAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACT 121 consensus_8759#0 CGAATGGCGAA-----TCGAAATCC--AACGAAAAGCACGACGCAGT-------AGT-AC 1899 consensus_8759#4 CGAATGGCGAA-----TCGAAATCC--AACGAAAAGCACGACGCAGT-------AGT-AC 93 consensus_8759#2 CGAGCAACGGAAGCGTTCGAAGTACGCAACGAAAAGGAAGTGGCGGTCCAGGTAAAT-AC 194 consensus_8759#5 CACGCGTCCGCAACTCTCCAGTCCTCCATCTGACATCTATGCGCTGG-----AGGAC-AC 59 consensus_8759#1 CGATCCGCCGCC-TGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGAC 235 consensus_8759#3 CGATCCGCCGCC-TGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGAC 180 * * * * * * * ** * ** consensus_8759#0 AAC----CGCGCGTGTAGCAAACCGA--GAAGGGAATGCT-CTTCTTCTTAATAGCTTTT 1952 consensus_8759#4 AAC----CGCGCGTGTAGCAAACCGA--GAAGGGAATGCT-CTTCTTCTTAATAGCTTTT 146 consensus_8759#2 ACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGA 254 consensus_8759#5 AATA---CAGGACCACCGCGAGTTCC-------------TGCTCGATCTCGACAGCCAC- 102 consensus_8759#1 AGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTC 295 consensus_8759#3 AGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTC 240 * * * * * consensus_8759#0 AAGTA-CAGCCTTTAGG--CTCGATATAACTTTG-GTAAACAGAAG--AGCT--GCTG-- 2002 consensus_8759#4 AAGTA-CAGCCTTTAAG--CTCGATATAACTTTG-GTAAACAGAAG--AGCT--GCTG-- 196 consensus_8759#2 GACCG-CACTGACCGAA--GCTGACACCAATCTGCGCAAGCTGGAGGAAGCG--ATCGAA 309 consensus_8759#5 AAGAG-CA-TCATCAAG--TCGCTCAACATTGTGGGCGAACATCTGGCGACG--CACAC- 155 consensus_8759#1 GATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAAC-AGCAGGAGGTAGGT---GCAAG 351 consensus_8759#3 GATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACCAGCAGGAGAGCCACCCAGCAAG 300 * ** * * * * * * consensus_8759#0 ---GCAACTAATCTACCCCCTCACTAACCTTTTA-----GATGTATTTAA-GCATT-TTT 2052 consensus_8759#4 ---GCAACTAATCTACCCCCTCACTAACCTTTTA-----GATGTATTTAA-GCATC-TTT 246 consensus_8759#2 ---GCAATCAATGCAAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTC-CGC 365 consensus_8759#5 ---GCGCGATACCGATCGGGCGGCCAAGTTGCGC----GAGCGGCTGCAGAAGAAC-AAC 207 consensus_8759#1 -CGAGGACGCATCTAGATGTGTCATTCT-TTGAGGAATATATCTTGCCACCACCAC-CAC 408 consensus_8759#3 ATGGTAGCGGATNCCGANNACCCATCCCATCCACCAAGGCGTTNNGCCACCACGAAATTT 360 * * consensus_8759#0 TGCAT-TGT-TTTGTTTTCAGCGCTGAAGTGGCATTCTTATGACGGTTTTATTTTA---- 2106 consensus_8759#4 TGCAT-TGT-TTTGTTTTCAGCGCTGAGGTGGCAT------------------------- 279 consensus_8759#2 TGCCTGCGA-GTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAAT 424 consensus_8759#5 CGCCGCTGG-GATGCCG------------------------------------------- 223 consensus_8759#1 CACCACCACCAATACCACCAAAACACCACCAAAAACCTATCCAACCTCTTATTA--TACC 466 consensus_8759#3 CCCNGTAACCAANNCANTNNGGGCANGTGGCCAGANNGGGCCGACCGACGAATGGTCATC 420 * consensus_8759#0 ------------------------------------------------------------ consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 GTCACGCCACAGTGGAGGAAGCTTTCAGTGTGCGTGTGAAGGAAGAAACGGAACGATATC 484 consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 ATCACCAACTATTCATCGCACACCGCCAACGAAGCTTTTGCTGTTGTCTTCGTCGTCGTC 526 consensus_8759#3 ANCCCCCCACGATANTCNCGCANGCCTNTCGNATTCTTNGGGCGTGTCTCCGTGCCTGTT 480 consensus_8759#0 ------------------------------------------------------------ consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 ATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGATGGAAGAATCAAGGATCATTC 544 consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 GTCGTCGACATCGTTACCACCAGTCGCGGGCTTACTGCGGCGGCGGTCTCA--GTTTTGT 584 consensus_8759#3 NCC-CNTCCNGCGATGCTGTNN-TTGCTGCTNGGNTGTGGTNNNCGCTTCATGGCCCCCC 538 consensus_8759#0 ------------------------------------------------------------ consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 CTAATGCTTACAATTTTAACTGCGTACACAATGCGGACTACCTAACGTGTCCGCTGTGTA 604 consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 TTGTTGCACACAGTCTGTTTGTCTAGCCACCAGCAAGATGG-TAGCGGATCCCGAAACCA 643 consensus_8759#3 CGGGTGAAGGGAAGTTTCCTCCCTGGCAACCCCTTGGGC------CAAAACCCAAAATTT 592 consensus_8759#0 ------------------------------------------------------------ consensus_8759#4 ------------------------------------------------------------ consensus_8759#2 CGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAA 664 consensus_8759#5 ------------------------------------------------------------ consensus_8759#1 TCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGA 703 consensus_8759#3 TGGGC------------------------------------------------------- 597 consensus_8759#0 ---- consensus_8759#4 ---- consensus_8759#2 ---- consensus_8759#5 ---- consensus_8759#1 CGAT 707 consensus_8759#3 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||