cluster # 8787

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Anopheles gambiae
cluster # 8787 cluster # 8787 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8787#0 length = 1986 sequences # 10

consensus_8787#1 length = 624 sequences # 1
consensus_8787#2 length = 359 sequences # 1

consensusID : consensus_8787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1986
fasta sequence

                              [TTTTTAAACCATTCTGGAAAACAAACGTTTACCGAAGATGAAATTCGTCTCAAAGTAAACAGTCTGTTTCAATT-TATT-CAGCAAATACATTGCTTTTGTAGACTGTCAGATGTGTGTGTACGCCCGGTCTAAATTTGCAGTGTTTTATTTTTGTCTCTATTGCCGTACAGTG-AACCTAATGATCGAATATTTAAAAGCAATAACCAAAAAAACTATTGGCCACTGTGTGTTAAAATGGTTACCATGAGAGTGTACGTAAAATCCTCAAGGGACAAACCTCCAAAGAAATGTTTCGTATTGCCTCTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGACGGCTCATGTTGGATACGGTTATCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTTAGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTGAAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGAGAATAATTGGTCTGTATTGCGTGGTG-AACG-AA-GGGGA--CATTTTGATCGCATAATAATGCACAGAGTGCTTCGTGCCATT-ACGTTAAGCAATGCGCTAATGAACTCGACGATGTGCAGCTGTAGTGAGATCGACTAGGACACAGAAACTACTTC-AACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACTAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGCTGCACTTTTTAAGAGGTC-GTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATCATTAATTAGATCGTTTAATTCTGACTGTGAAAAAAA----AATCGATCAACTCCTACTTACGATCACTCACACGCACGTTAGGTGTTTCGTTTTTCTCTTCCAATTAAAAAAAATCCGCGCATGTATGTTCTTTAGGTCCTTTCTTAGATATTATTG-GTGTTGTACAAATAAAAGTCGGTTCGCCACTCTACGTTATGATGCACAGGCATTGTATCGCTGTCGTGTCGTGTTGTTTTCCGTTTACTGTAGTCTCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGTTGTACTGTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTCTCCACATCCCCGGTCAAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCCCTTCATCCCTACCATGCCCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTACAGTTTTATCAGCTTCGGAGCGCTAAGTTCTGGCGTGTCTTCGCCATTATCGTCGCAGCAGAGAGGACGTTTGTTGCTGCCATTGCTGCTGCTGTCGGTGGAGATCGGCGTGTCCGGTTCGGTACTGTCCGCGACGGGGCTGGTCGTGCTCAACGCGTCCTTTCCAGCGACTGCTGAATCGCCTAAGCTTTCACCGGATGCTTTCGTGCAGTCGCTGACGAGAGGTGTCACTTGTGTGTTGGCGGCGGCGGCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTTCGTTAATTCGGTCATCGTGACCGCTGCTGCTTCGGCCGTGCTGCTATTGTCAGTGGCATCCTTGGACGTATCCTCAGCATCGAGGAGTTTTTCTTCGTCCTCCTGAGCAGAGCCACTCGAGCCCGGGGGGGTTTTTGCCATTGGAAACGACGCCTCCGGCAGCCGCCGCTTCGTTGCTTTCCGATTCCGACGATTCCACCATAGCGGTGCGGGAGTTTTCGTCGTTCGTATTACCCTCATCCTCGACGATGCCATTGTCTC]

[+] EMBL CNS099CD             [TTTTTAAACCATTCTGGAAAACAAACGTTTACCGAAGATGAAATTCGTCTCAAAGTAAACAGTCTGTTTCAATT TATT CAGCAAATACATTGCTTTTGTAGACTGTCAGATGTGTGTGTACGCCCGGTCTAAATTTGCAGTGTTTTATTTTTGTCTCTATTGCCGTACAGTG AACCTAATGATCGAATATTTAAAAGCAATAACCAAAAAAACTATTGGCCACTGTGTGTTAAAATGGTTACCATGAGAGTGTACGTAAAATCCTCAAGGGACAAACCTCCAAAGAAATGTTTCGTATTGCCTCTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGACGGCTCATGTTGGATACGGTTATCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTTAGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTGAAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGAGAATAATTGGTCTGTATTGCGTGGTGCAACGCAAGGGGGA  CATTTTGATCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS093IK             [                                      TGAAATTCGTCTCAAAGTAAACAGTCTGTTTCAATTATATTACAGCAAATACATTGCTTTTGTAGACTGTCAGATGTGTGTGTACGCCCGGTCTAAATTTGCAGTGTTTTATTTTTGTCTCTATTGCCGTACAGTGAAACCTAATGATCGAATATTTAAAAGCAATAACCAAAAAAACTATTGGCCACTGTGTGTTAAAATGGTTACCATGAGAGTGTACGTAAAATCCTCAAGGGACAAACCTCCAAAGAAATGTTTCGTATTGCCTCTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGACGGCTCATGTTGGATACGGTTATCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTTAGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTGAAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGAGAATAATTGGTCTGTATTGCGTGGTG AACG AA GGGGA  CATTTTGATCGCATAATAATGCACAGAGTGCTTCGTGCCATT ACGTTAAGCAATGCGCTAATGAACTCGACGATGTGCAGCTGTAGTGAGATCGACTAGGACACAGAAACTACTTT AACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACTAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09RQJ             [                                                                                                                                                                                   aaaaaaaaaAAAATTTAAAAGCAATAACCAAAAAAACTATTGGCCACTGTGTGTTAAAATGGTTACCATGAGAGTGTACGTAAAATCCTCAAGGGACAAACCTCCAAAGAAATGTTTCGTATTGCCTCTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGACGGCTCATGTTGGATACGGTTATCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTTAGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTGAAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGAGAATAATTGGTCTGTATTGCGTGGTG AACG AA GGGGA  CATTTTGATCGCATAATAATGCACAGAGTGCTTCGTGCCATTAAAAAAAAAAAATGCGCTAATGAACTCGACGATGTGCAGCTGTAGTGAGATCGGCTAGGGCACAGAAACTACTTC AACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACTAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGCTGCACTTTTTAAGAGGTC GTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATCATTAATTAGATCGTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS099CC             [                                                                                                                                                                                                                                                              GTACGTAAAATCCTCAAGGGACAAACCTCCAAAGAAATGTTTCGTATTGCCTCTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGACGGCTCATGTTGGATACGGTTATCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTTAGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTGAAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGAGAATAATTGGTCTGTATTGCGTGGTG AACG AA GGGGA  CATTTTGATCGCATAATAATGCACAGAGTGCTTCGTGCCATT ACGTTAAGCAATGCGCTAATGAACTCGACGATGTGCAGCTGTAGTGAGATCGACTAGGACACAGAAACTACTTC AACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACTAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGCTGCACTTTTTAAGAGGTCGGTCAAACGTTAGATCGA CTTCGCCAATGCTCGCGATCATTAATTAGATCGTTTAATTCTGACTGTGAAAACAA    AATCGATCAACTCCTACTTACGATCACTCACACGtagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BX624492             [                                                                                                                                                                                                                                                                                                                  CTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGACGGCTCATGTTGGATACGGTTATCCTAAAGTATATAAATNCAGTAAAATGAACAAAAACTTAGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTGAAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGAGAATAATTGGTCTGTATTGCGTGGTA AACG AA GGGGA  CATTTTGATCGCATAATAATGCACAGAGTGCTTCGTGCCATT ACGTTAAGCAATGCGCTAATGAACTCGACGATGTGCAGCTGTAGTGAGATCGACTAGGACACAGAAACTACTTC AACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACCAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGCTGCACTTTTTAAGATGTC GTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATCATTAATTAGATCGTTTAATTCTCACTGTGAAAAAAAAAACAATCGATCAACTCCTACTTACGATCACTCACACGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS09RQI             [                                                                                                                                                                                                                                                                                                                                                                      CTGACGGCTCATGTGGGAAACGGTTACCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTTTTTTTTTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTGAAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGAGAATAATTGGTCTGTATTGCGTGGTG AACG AA GGGGA  CATTTTGATCGCATAATAATGCACAGAGTGCTTCGTGCCATT ACGTTAAGCAATGCGCTAATGAACTCGACGATTTGCAGCTGTAGTGAGATCGACTAGGACACAGAAACTACTTC AACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACTAATCGTAACATTGGGAACTATATGGTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAttttttttt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BM579733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cgTGCGTGGTG AACG AA GGGGAACCATTTGGATCGCATAATAATGCACCGAGTGCTTCGTGCCATT ACGTTAAGCAATGCGCTAATAAACTCGACGATGTGCAGCTGTAGTGAGATCGACTAGGACACAGAAACTACTTC AACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACCAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGATGTACTTTTTAAGATGTC GTCAAACGTTAGATCGAGCTTCGCTAATGCTCGCGATCATTAATTAGATCGTTTAATTCTCACTGTGAAAAAAAAAACAATCGATCAACTCCTACTTACGATCACTCACACGCACATTAGGTGTTTCGTTTTTCTCTTCCAATTAAAAAAAATCCGCGCATGTATGTTCTTTAGGTCCTTTCTTAGATATTATTG GTGTTGTACAAATAAAAGTCGGTTCGCCACTCTATGTTATGATGCACAGGCATTGTATCGCTGTCGTGTCGTGTTGTTTTCCGTTTACTGTAGTCTCGTCTTGGATATATCTCCTCTTTTAGTGACCGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS093IJ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCGACTAGGACACAGAAACTACTTCTAACTTGGATTAGGTTTTTTTTGCGCCTTAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACAATCTTGCCAAAACTAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGCAAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGCTGCACTTTTTAAGAGGTC GTCAAACGTTAGATCGACGTTCGCCAATGCTCGCGATCATTAATTAGATCGTTTAATTCTGACTGTGAAAAAAA    AATCGATCAACTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08PF4             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTCTTATATATTATTGTGTGTTGTACAAATAAAAGTCGGTTCGCCACTCTACGTTATGATGCACAGGCATTGTATCGCTGTCGTGTCGTGTTGTTTTCCGTTTACTGTAGTCTCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGTTGTACTGTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTCTCCACATCCCCGGTCAAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCCCTTCATCCCTACCATGCCCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTACAGTTTTATCAGCTTCGGAGCGCTAAGTTCTGGCGTGTCTTCGCCATTATCGTCGCAGCAGAGAGGACGTTTGTTGCTGCCATTGCTGCTGCTGTCGGTGGAGATCGGCGTGTCCGGTTCGGTACTGTCCGCGACGGGGCTGGTCGTGCTCAACGCGTCCTTTCCAGCGACTGCTGAATCGCCTAAGCTTTCACCGGATGCTTTCGTGCAGTCGCTGACGAGAGGTGTCACTTGTGTGTTGGCGGCGGCGGCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTTCGTTAATTCGGTCATCGTGACCGCTGCTGCTTCGGCCGTGCTGCTATTGTCAGTGGCATCCTTGGACGTATCCTCAGCATCGAGGAGTTTTTCTTCGTCCTCCTGAGCAGAGCCACTCGAGCCCGGGGGGGTTTTTGCCATTGGAAACGACGCCTCCGGCAGCCGCCGCTTCGTTGCTTTCCGATTCCGACGATTCCACCATAGCGGTGCGGGAGTTTTCGTCGTTCGTATTACCCTCATCCTCGACGATGCCATTGTCTC]
[+] EMBL CNS0983T             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTATTG GTGTTGTACAAATAAAAGTCGGTTCGCCACTCTACGTTATGATGCACAGGCATTGTATCGCTGTCGTGTCG   TGTTTTCCGTTTACTGTAGTCTCGTCTTGGATTTATCCCCTCTTTTAGTGACCGTAATGATTGTTGTTGTACTGTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTC      TCGCCGGTCAAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCCCTTCATCCCTACCATGCCCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTACAGTTTTATCAGCTTCGGAGCGCTAAGTTCTGGCGTGTCTTCGCCATTATCGTCGCAGCAGAGAGGACGTTTGTTGCTGCCATTGCTGCTGCTGTCGGTGGAGATCGGCGTGTCCGGTTCGGTACTGTCCGCGACGGGGCTGGTCGTGCTCAACGCGTCCTTTCCAGCAACTGCTGAATCGCCTAAGCTTTCACCGGATGCTTTCGTGCAGTCGTTGACGAGAGGTGTCACTTGTGTGTTGGCGGCGGCGGCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTTCGTTAATTCGGTCATCGTGACCGCTGCTGCTTCGGCCGTGCTGCTATTGTCAGTGGCATCCTTGGACGTATCCTCAGCATCGAGGAGCTTTTCTTCGTCCTCCTGAGCAGAGCCACTCGAGCCC GGCGTACTTTTGCCATTGGAAACGACGCCTCCGGCAGCCGC                                                                                               ]




>consensus_8787#0
TTTTTAAACCATTCTGGAAAACAAACGTTTACCGAAGATGAAATTCGTCTCAAAGTAAAC
AGTCTGTTTCAATTTATTCAGCAAATACATTGCTTTTGTAGACTGTCAGATGTGTGTGTA
CGCCCGGTCTAAATTTGCAGTGTTTTATTTTTGTCTCTATTGCCGTACAGTGAACCTAAT
GATCGAATATTTAAAAGCAATAACCAAAAAAACTATTGGCCACTGTGTGTTAAAATGGTT
ACCATGAGAGTGTACGTAAAATCCTCAAGGGACAAACCTCCAAAGAAATGTTTCGTATTG
CCTCTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGAC
GGCTCATGTTGGATACGGTTATCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTT
AGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTG
AAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGA
GAATAATTGGTCTGTATTGCGTGGTGAACGAAGGGGACATTTTGATCGCATAATAATGCA
CAGAGTGCTTCGTGCCATTACGTTAAGCAATGCGCTAATGAACTCGACGATGTGCAGCTG
TAGTGAGATCGACTAGGACACAGAAACTACTTCAACTTGGATTAGGTTTTTTTTGCGCCT
TAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACA
ATCTTGCCAAAACTAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGC
AAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATG
CTGCTGCACTTTTTAAGAGGTCGTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATC
ATTAATTAGATCGTTTAATTCTGACTGTGAAAAAAAAATCGATCAACTCCTACTTACGAT
CACTCACACGCACGTTAGGTGTTTCGTTTTTCTCTTCCAATTAAAAAAAATCCGCGCATG
TATGTTCTTTAGGTCCTTTCTTAGATATTATTGGTGTTGTACAAATAAAAGTCGGTTCGC
CACTCTACGTTATGATGCACAGGCATTGTATCGCTGTCGTGTCGTGTTGTTTTCCGTTTA
CTGTAGTCTCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGTTGTACT
GTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTCTCCACATCCCCGGTC
AAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCCCTTCATCCCTACCATGC
CCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTACAGTTT
TATCAGCTTCGGAGCGCTAAGTTCTGGCGTGTCTTCGCCATTATCGTCGCAGCAGAGAGG
ACGTTTGTTGCTGCCATTGCTGCTGCTGTCGGTGGAGATCGGCGTGTCCGGTTCGGTACT
GTCCGCGACGGGGCTGGTCGTGCTCAACGCGTCCTTTCCAGCGACTGCTGAATCGCCTAA
GCTTTCACCGGATGCTTTCGTGCAGTCGCTGACGAGAGGTGTCACTTGTGTGTTGGCGGC
GGCGGCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTTCGTTAATTCGGTCAT
CGTGACCGCTGCTGCTTCGGCCGTGCTGCTATTGTCAGTGGCATCCTTGGACGTATCCTC
AGCATCGAGGAGTTTTTCTTCGTCCTCCTGAGCAGAGCCACTCGAGCCCGGGGGGGTTTT
TGCCATTGGAAACGACGCCTCCGGCAGCCGCCGCTTCGTTGCTTTCCGATTCCGACGATT
CCACCATAGCGGTGCGGGAGTTTTCGTCGTTCGTATTACCCTCATCCTCGACGATGCCAT
TGTCTC

consensusID : consensus_8787#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 624
fasta sequence

                              [CTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGATGCACTTTTTAAGATGTCGTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATCATTAATTAGATCGTTTAATTCTCACTGTGAAAAAAAAAACAATCGATCAACTCCTACTTACGATCACTCACACGTACATTATGTGTTTCGTTTTCTCTTCCAATTAAAAAAAACCCGCGCATGTATGTTCTTTACGTCCTTTCTTAGATATTATTGGTGTTGTACAAATAAAAGTCGGTTCGCCACTCTATGTTATGATGCACAGGCATTGTAGCGCTGTCGTGTCGTGTTGTTTTCCGTTTACTGTAGTCTCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGTTGTACTGTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTCGCCACATCCCCGGTCAAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCGCTCTCTCCCTACCATGCCCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTACAGTTTTATCAGCTTCGGAGCGCCGGACGCGTGGGCGG]

[-] EMBL BM649782             [CTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGATGCACTTTTTAAGATGTCGTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATCATTAATTAGATCGTTTAATTCTCACTGTGAAAAAAAAAACAATCGATCAACTCCTACTTACGATCACTCACACGTACATTATGTGTTTCGTTTTCTCTTCCAATTAAAAAAAACCCGCGCATGTATGTTCTTTACGTCCTTTCTTAGATATTATTGGTGTTGTACAAATAAAAGTCGGTTCGCCACTCTATGTTATGATGCACAGGCATTGTAGCGCTGTCGTGTCGTGTTGTTTTCCGTTTACTGTAGTCTCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGTTGTACTGTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTCGCCACATCCCCGGTCAAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCGCTCTCTCCCTACCATGCCCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTACAGTTTTATCAGCTTCGGAGCGCCGGACGCGTGGGCGG]




>consensus_8787#1
CTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATGCTGATGCACTT
TTTAAGATGTCGTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATCATTAATTAGAT
CGTTTAATTCTCACTGTGAAAAAAAAAACAATCGATCAACTCCTACTTACGATCACTCAC
ACGTACATTATGTGTTTCGTTTTCTCTTCCAATTAAAAAAAACCCGCGCATGTATGTTCT
TTACGTCCTTTCTTAGATATTATTGGTGTTGTACAAATAAAAGTCGGTTCGCCACTCTAT
GTTATGATGCACAGGCATTGTAGCGCTGTCGTGTCGTGTTGTTTTCCGTTTACTGTAGTC
TCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGTTGTACTGTGCTAAA
AACTATACTATCCTACGCATTACACCTCATATTCCTCGCCACATCCCCGGTCAAGCACAA
TGGCTCACCATATGCACCCCCATTTTAAACCCTCGCTCTCTCCCTACCATGCCCCCACGA
ACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTACAGTTTTATCAGCT
TCGGAGCGCCGGACGCGTGGGCGG

consensusID : consensus_8787#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 359
fasta sequence

                              [CGTTCGTAGCAGTCGTTGACGAGAGGTGTACACTTGTGTGTTGGCGGCGCGCCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTATCGTTAATTCAGTCATCGTGACCGCTGCTGCCTGCGCCGTGCTGCTATTGTCAGTGGCATCCCTTGGACCGTATCCTCAGCATCGAGGAGCTTTTCTTCGGTCCTCCTGAGCAGAGCCACTCGAGCCCGGCGTACTTTTGCCATTGACACGACAGCCTCCGCAGCCGCCGCTTCGTTGCTTTCCGATTCCGACGATTCCACCATAGCGGTGCGGGAGTTTTCGATCGTTCGTATACCCGTATCCTCGACNATGCCACTTAAAAACCT]

[-] EMBL AL929673             [CGTTCGTAGCAGTCGTTGACGAGAGGTGTACACTTGTGTGTTGGCGGCGCGCCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTATCGTTAATTCAGTCATCGTGACCGCTGCTGCCTGCGCCGTGCTGCTATTGTCAGTGGCATCCCTTGGACCGTATCCTCAGCATCGAGGAGCTTTTCTTCGGTCCTCCTGAGCAGAGCCACTCGAGCCCGGCGTACTTTTGCCATTGACACGACAGCCTCCGCAGCCGCCGCTTCGTTGCTTTCCGATTCCGACGATTCCACCATAGCGGTGCGGGAGTTTTCGATCGTTCGTATACCCGTATCCTCGACNATGCCACTTAAAAACCT]




>consensus_8787#2
CGTTCGTAGCAGTCGTTGACGAGAGGTGTACACTTGTGTGTTGGCGGCGCGCCGGTTGTC
TGCACCTGTTCCGTTACCGAGGTACCATTGTATCGTTAATTCAGTCATCGTGACCGCTGC
TGCCTGCGCCGTGCTGCTATTGTCAGTGGCATCCCTTGGACCGTATCCTCAGCATCGAGG
AGCTTTTCTTCGGTCCTCCTGAGCAGAGCCACTCGAGCCCGGCGTACTTTTGCCATTGAC
ACGACAGCCTCCGCAGCCGCCGCTTCGTTGCTTTCCGATTCCGACGATTCCACCATAGCG
GTGCGGGAGTTTTCGATCGTTCGTATACCCGTATCCTCGACNATGCCACTTAAAAACCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8787#0      TTTTTAAACCATTCTGGAAAACAAACGTTTACCGAAGATGAAATTCGTCTCAAAGTAAAC 60
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      AGTCTGTTTCAATTTATTCAGCAAATACATTGCTTTTGTAGACTGTCAGATGTGTGTGTA 120
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      CGCCCGGTCTAAATTTGCAGTGTTTTATTTTTGTCTCTATTGCCGTACAGTGAACCTAAT 180
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GATCGAATATTTAAAAGCAATAACCAAAAAAACTATTGGCCACTGTGTGTTAAAATGGTT 240
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      ACCATGAGAGTGTACGTAAAATCCTCAAGGGACAAACCTCCAAAGAAATGTTTCGTATTG 300
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      CCTCTCGAATAACGCCCCCAAAAGCATTTCATTACACAAAATCGTGCTCTTCTAGCTGAC 360
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GGCTCATGTTGGATACGGTTATCCTAAGGTATATAAATACAGTAAAATGAACAAAAACTT 420
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      AGATCGTACCTACTATGAGATAAACATGCATTTTTTTCACTTACACTAACGTATAAAGTG 480
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      AAACTACGGACAGGTCAAATAAAAATCCATTCCGTTTCTTCAAACGTTCGGCTGATTTGA 540
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GAATAATTGGTCTGTATTGCGTGGTGAACGAAGGGGACATTTTGATCGCATAATAATGCA 600
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      CAGAGTGCTTCGTGCCATTACGTTAAGCAATGCGCTAATGAACTCGACGATGTGCAGCTG 660
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      TAGTGAGATCGACTAGGACACAGAAACTACTTCAACTTGGATTAGGTTTTTTTTGCGCCT 720
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      TAATTTTCAACTGTTTCATTTAAAATTTCGTTACTATGCCCGACAAGATTAATACAAACA 780
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      ATCTTGCCAAAACTAATCGTAACATTGGGAACTATATTTTAAAACGAATCCGGCTTGTGC 840
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      AAAAAATACAACTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATG 900
consensus_8787#1      -----------CTAAGCCATACCCTTCGAAAGAAATGTCCACATGCGTGTTGTTGGGATG 49
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      CTGCTGCACTTTTTAAGAGGTCGTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATC 960
consensus_8787#1      CTGATGCACTTTTTAAGATGTCGTCAAACGTTAGATCGAGCTTCGCCAATGCTCGCGATC 109
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      ATTAATTAGATCGTTTAATTCTGACTGTGAAAAAAAAA----TCGATCAACTCCTACTTA 1016
consensus_8787#1      ATTAATTAGATCGTTTAATTCTCACTGTGAAAAAAAAAACAATCGATCAACTCCTACTTA 169
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      CGATCACTCACACGCACGTTAGGTGTTTCGTTTTTCTCTTCCAATTAAAAAAAATCCGCG 1076
consensus_8787#1      CGATCACTCACACGTACATTATGTGTTTCGTTTT-CTCTTCCAATTAAAAAAAACCCGCG 228
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      CATGTATGTTCTTTAGGTCCTTTCTTAGATATTATTGGTGTTGTACAAATAAAAGTCGGT 1136
consensus_8787#1      CATGTATGTTCTTTACGTCCTTTCTTAGATATTATTGGTGTTGTACAAATAAAAGTCGGT 288
consensus_8787#2      -------------------CGTTCGTAGCAGTCGTTGACGAGAGGTGTACACTTGTGTGT 41
                                         * *** ***   *  ***  *        * *   **  **

consensus_8787#0      TCGCCACTCTACGTTATGATGCACAGGCATTGT-ATCGCTGTCGTGTCGTGTTGTTT-TC 1194
consensus_8787#1      TCGCCACTCTATGTTATGATGCACAGGCATTGT-AGCGCTGTCGTGTCGTGTTGTTT-TC 346
consensus_8787#2      TGGCGGCGCGCCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTATCGTTAATT 101
                      * **  * *   * *    *****  *    ** * **  **    * ** * ***  * 

consensus_8787#0      CGTTTACTGTAGTCTCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGT 1254
consensus_8787#1      CGTTTACTGTAGTCTCGTCTTGGATATATCCCCTCTTTTAGTGACCGTAATGATTGTTGT 406
consensus_8787#2      CAGTCATCGTGACCGC-TGCTGCCTGCG-CCGTGCTGCTATTGTC---AGTGGCATCCCT 156
                      *  * *  **   * * *  **  *    **   **  ** ** *   * **       *

consensus_8787#0      TGTACTGTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTCTCCACATCC 1314
consensus_8787#1      TGTACTGTGCTAAAAACTATACTATCCTACGCATTACACCTCATATTCCTCGCCACATCC 466
consensus_8787#2      TGGACCGTATCCTCAGCATCGAGGAGCTTTTCTTCGGTCCTCCTGAGCAGAGCCA---CT 213
                      ** ** **      * *         **   * *    **** *   *    ***   * 

consensus_8787#0      CCGGTCAAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCCCTTCATCCCTA 1374
consensus_8787#1      CCGGTCAAGCACAATGGCTCACCATATGCACCCCCATTTTAAACCCTCGCTCTCTCCCTA 526
consensus_8787#2      CGAGCCCGGCGTACTTTTGCCATTGACACGACAGCCTCCGCAGCCGCCGCTTCGTTGCTT 273
                      *  * *  **  * *    *     *  *  *  * *    * **  * **   *  ** 

consensus_8787#0      CCATGCCCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTA 1434
consensus_8787#1      CCATGCCCCCACGAACACATCTACGTCCTGTGTCGCTCTCTTGACTTTCGTTTCACTCTA 586
consensus_8787#2      TCCGATTCCGACGATTCCACCATAGCGGTGCGGGAGTTTTCGATCGTTCGTAT-ACCC-- 330
                       *     ** ****   ** *   *   ** *    * *     * ***** * ** *  

consensus_8787#0      CAGTTTTATCAGCTTCGGAGCGCTAAGTTCTGGCGTGTCTTCGCCATTATCGTCGCAGCA 1494
consensus_8787#1      CAGTTTTATCAGCTTCGGAGCGCCGGACGCGTGGGCGG---------------------- 624
consensus_8787#2      --GTATCCTCGACNATGCCAC-TTAAAAACCT---------------------------- 359
                        ** *  **  *   *   *        *                              

consensus_8787#0      GAGAGGACGTTTGTTGCTGCCATTGCTGCTGCTGTCGGTGGAGATCGGCGTGTCCGGTTC 1554
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GGTACTGTCCGCGACGGGGCTGGTCGTGCTCAACGCGTCCTTTCCAGCGACTGCTGAATC 1614
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GCCTAAGCTTTCACCGGATGCTTTCGTGCAGTCGCTGACGAGAGGTGTCACTTGTGTGTT 1674
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GGCGGCGGCGGCGGTTGTCTGCACCTGTTCCGTTACCGAGGTACCATTGTTCGTTAATTC 1734
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GGTCATCGTGACCGCTGCTGCTTCGGCCGTGCTGCTATTGTCAGTGGCATCCTTGGACGT 1794
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      ATCCTCAGCATCGAGGAGTTTTTCTTCGTCCTCCTGAGCAGAGCCACTCGAGCCCGGGGG 1854
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      GGTTTTTGCCATTGGAAACGACGCCTCCGGCAGCCGCCGCTTCGTTGCTTTCCGATTCCG 1914
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      ACGATTCCACCATAGCGGTGCGGGAGTTTTCGTCGTTCGTATTACCCTCATCCTCGACGA 1974
consensus_8787#1      ------------------------------------------------------------
consensus_8787#2      ------------------------------------------------------------
                                                                                  

consensus_8787#0      TGCCATTGTCTC 1986
consensus_8787#1      ------------
consensus_8787#2      ------------