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Anopheles gambiae
cluster # 8800 cluster # 8800       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8800#0 length = 1155 sequences # 7  
consensus_8800#1 length = 905 sequences # 3  
consensus_8800#2 length = 660 sequences # 1  
consensus_8800#3 length = 317 sequences # 1  

consensusID : consensus_8800#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1155
fasta sequence
                              [CCGTACCGCTGGTGGTGGTGCGGCAGGATCGGCTCAACTTCGGCAACGTCAGCACGATCCGGTGGATGAAGCAGGTGCGCGAGGTAACGCTGGACGAGCTGCCCGGACCGGACGAGTTCATCATCGTCAACCCGGAGGAGATTGGCCCGTTCCCGGTGAACTACGACGAGCGGAACTGGAACCTGCTCGCGACCTTCCTGCAGAAGGAGGAAAGCCGCACTATGATTCCGGTGTACACACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAA-GATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCA-GGGCGAGTTCGGCACCG-CGGAGCACATCATCGA-GAAGTCGCTGAAGAACATCAAGGAGGAGACGAAGTGGAGCGACGA-G-AATCTGCCGGTCATCGAGCAGTGGCTCGACCACTTCCTCGCCAGCAACGGCG-TGGCGGACCAGAAGTTTCTCGGCTAGCCACCGCGTACGGTGTGCGAATGAAGCGGTTGGATGTTGGACAGGCCGAGAGCAGATAGTACCAGGTCTGCGGGCAATAGATGCACACGCATCTCACAGGGAAAGGAGCCACGAGAGAGAGAGAGATATATAGAGAGAGGATTGTCAAACGGTAGCTATTTGTTTTTTGCGTCTACTTCTTCCGTTTTTTTCGTTGTTGTATCCTGCTCTAGAGAGATAGCGTAGCGCCTATAGTTAAGTGTCTGCTGTCCGTGTCAAGCC]

[+] EMBL BM649572             [CCGTACCGCTGGTGGTGGTGCGGCAGGATCGGCTCAACTTCGGCAACGTCAGCACGATCCGGTGGATGAAGCAGGTGCGCGAGGTAACGCTGGACGAGCTGCCCGGACCGGACGAGTTCATCATCGTCAACCCGGAGGAGATTGGCCCGTTCCCGGTGAACTACGACGAGCGGAACTGGAACCTGCTCGCGACCTTCCTGCAGAAGGAGGAAAGCCGCACTATGATTCCGGTGTACACACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAA GATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX627956             [                                                                                                                                                                                                                                                                                                                                                                         AGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAA GATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCA GGGCGAGTTCGGCACCG CGGAGCACATCATCGA GAAGTCGCTGAAGAACATCAAGGAGGAGACGAAGTGGAGCGACGA G AATCTGCCGGTCATCGAGCAGTGGCTCGACCACTTCCTCGCCAGCAACGGCG TGGCGGACCAGAAGTTTCTCGGCTAGCCACCGCGTACGGTGTGCGAATGAAGCGGTTGGATGTTGGACAGGCCGAGAGCAGATAGTACCAGGTCTGCGGGCAATAGATGCACACGCATCTCACAGGGAAAGGAGCCNCGAGAGAGAGAGAGATATATAGAGAGAGGATTGTCNAACGGTAGCTATTTGNTTTTTGCGTCT                                                                                       ]
[+] EMBL AL695534             [                                                                                                                                                                                                                                                                                                                                                                                  cccgaggtaTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAA GATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAATATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCAGGGGCGAGTTCGGCA CG CGGAGCACATCATCGACGAAGTCGCTGAAGAACATCAAGGAGGAGACGAAGTGGAGCGACGACGCAATCTGCCGGTCATCGAGCAGTGGCTCGACCACTTCCTCGCCAGCAACGGCGCTGGCGGACCAGAAGTTTCTCGGCTAGCCACCGCGTACCGTGTAGGAATGAAGCGGTTagg                                                                                                                                                                                                                                   ]
[+] EMBL AL696191             [                                                                                                                                                                                                                                                                                                                                                                                                                           ggCAAGA   ATCGCACG AGGTTTAGAAGACGCTGGCCGGCTGCCCGAGCCAA CGTTCAATGATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCA GGGCGAGTTCGGCACCGCCGGAGCACATCATCGA GAAGTCGCTGAAGAACATCAAGGAGGAGACGAAGTGGAGCGACGA G AATCTGCCGGTCATCGAGCAGTGGCTCGA CACTT                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX629251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAA GATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCA GGGCGAGTTCGGCACCG CGGAGCACATCATCGA GAAGTCGCTGAAGAACATCAAGGAGGAGACGAAGTGGAGCGACGA G AATCTGCCGGTCATCGAGCAGTGGCTCGACCACTTCCTCGCCAGCAACGGCG TGGCGGACCAGAAGTTTCTCGGCTAGCCACCGCGTACGGTGTGCGAATGAAGCGGTTGGATGTTGGACAGGCCGAGAGCAGATAGTACCAGGTCTGCGGGCAATAGATGCACACGCATCTCACAGGGAAAGGAGCCACGAGAGAGAGAGAGATATATAGAGAGAGGATTGTCAAACGGTAGCTATTTGTTTTTTGCGTCTACTTCTTCCGTTTTTTTCGTTGTTGTATCCTGCTCTAGAGAGATAGCGTAGCGCCTATAGTTAAGTGTCTGCTGTCCGTGTCAAGCC]
[+] EMBL BX629142             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAA GATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCA GGGCGAGTTCGGCACCG CGGAGCACATCATCGA GAAGTCGCTGAAGAACATCAAGGAGGAGACGAAGTGGAGCGACGA G AATCTGCCGGTCATCGAGCAGTGGCTCGACCACTTCCTCGCCAGCAACGGCG TGGCGGACCAGAAGTTTCTCGGCTAGCCACCGCGTACGGTGTGCGAATGAAGCGGTTGGATGTTGGACAGGCCGAGAGCAGATAGTACCAGGTCTGCGGGCAATAGATGCACACGCATCTCACAGGGAAAGGAGCCACGAGAGAGAGAGAGATATATAGAGAGAGGATTGTCAAACGGTAGCTATTTGTTTTTTGCGTCTACTTCTTCCGTTTTTTTCGTTGTTGTATCCTGCTCTAGAGAGATAGCGTAGCGCCTATAGTTAAGTGTCTGCTGTCCGTGTCAAGCC]
[+] EMBL BX612086             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGAAGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAGCTGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_8800#0 CCGTACCGCTGGTGGTGGTGCGGCAGGATCGGCTCAACTTCGGCAACGTCAGCACGATCC GGTGGATGAAGCAGGTGCGCGAGGTAACGCTGGACGAGCTGCCCGGACCGGACGAGTTCA TCATCGTCAACCCGGAGGAGATTGGCCCGTTCCCGGTGAACTACGACGAGCGGAACTGGA ACCTGCTCGCGACCTTCCTGCAGAAGGAGGAAAGCCGCACTATGATTCCGGTGTACACAC AAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCG GACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGC GAGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGC GAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGAC CGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGC CTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTG AAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAAC ATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGAAGGGTACGACATGGTGTCGCAG CTGTACGTGCAGCACCAGGGCGAGTTCGGCACCGCGGAGCACATCATCGAGAAGTCGCTG AAGAACATCAAGGAGGAGACGAAGTGGAGCGACGAGAATCTGCCGGTCATCGAGCAGTGG CTCGACCACTTCCTCGCCAGCAACGGCGTGGCGGACCAGAAGTTTCTCGGCTAGCCACCG CGTACGGTGTGCGAATGAAGCGGTTGGATGTTGGACAGGCCGAGAGCAGATAGTACCAGG TCTGCGGGCAATAGATGCACACGCATCTCACAGGGAAAGGAGCCACGAGAGAGAGAGAGA TATATAGAGAGAGGATTGTCAAACGGTAGCTATTTGTTTTTTGCGTCTACTTCTTCCGTT TTTTTCGTTGTTGTATCCTGCTCTAGAGAGATAGCGTAGCGCCTATAGTTAAGTGTCTGC TGTCCGTGTCAAGCC



consensusID : consensus_8800#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 905
fasta sequence
                              [CGAGCGGAACTGGAACCTGCTCGCGACCTTCCTGCAGAAGGAGGAAAGCCGCACCATGATTCCGGTGTACACACGAGCGAAGCTGCTGCACGACGCCTGGAACCTGGCGTACGCGGGTGATCTTAGCTTCGGTACGGCCTTCAACATGACGCTCTTCATGAAGTACGAGCGCAACCATCTGGTGTGGAATCCCGTCTTCACGCTGATCGACCATATCGGCCGGCACATCGACATGTCGGCGGTGCACAAAAAGTTCGAGATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGTAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCAGGGCGAGTTCGGCACCGCGGAG]

[+] EMBL BX611554             [CGAGCGGAACTGGAACCTGCTCGCGACCTTCCTGCAGAAGGAGGAAAGCCGCACCATGATTCCGGTGTACACACGAGCGAAGCTGCTGCACGACGCCTGGAACCTGGCGTACGCGGGTGATCTTAGCTTCGGTACGGCCTTCAACATGACGCTCTTCATGAAGTACGAGCGCAACCATCTGGTGTGGAATCCCGTCTTCACGCTGATCGACCATATCGGCCGGCACATCGACATGTCGGCGGTGCACAAAAAGTTCGAGATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM630822             [                                                                                                                                                                               ccgCTGGTGTGGAATCCCGTCTTCACGCTGATCGACCATATCGGCCGGCACATCGACATGTCGGCGGTGCACAAAAAGTTCTAGATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCTAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGGTAAGGGTACGAC                                                   ]
[+] EMBL BM657795             [                                                                                                                                                                                                                   ccgATCGGCCGGCACATCGACATGTCGGCGGTGCACAAAAAGTTCGAGATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAATATGATCAACTCGGCGACCGGCCTGTTCACCACGCAGG AAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCAGGGCGAGTTCGGCACCGCGGAG]


>consensus_8800#1 CGAGCGGAACTGGAACCTGCTCGCGACCTTCCTGCAGAAGGAGGAAAGCCGCACCATGAT TCCGGTGTACACACGAGCGAAGCTGCTGCACGACGCCTGGAACCTGGCGTACGCGGGTGA TCTTAGCTTCGGTACGGCCTTCAACATGACGCTCTTCATGAAGTACGAGCGCAACCATCT GGTGTGGAATCCCGTCTTCACGCTGATCGACCATATCGGCCGGCACATCGACATGTCGGC GGTGCACAAAAAGTTCGAGATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCT GGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAA GAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAA GAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTG CCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTGGGCTGCAGCGCGTCATCAA CTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTG CCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAACATCATGGTGCTGGAGGACAACGG CAACTTTACCGACAACGATATTAGCCTGATCTTCAAGATGCTGTCCGGCGGGTCGAGCGG CTACTCGACGCTCTTCAACTTCCTGAAGAACAACTGGGATGCAATCAAGCTGCGCTTCAA GGACCGCGAGTCGCTGTGGGACAACATGATCAACTCGGCGACCGGCCTGTTCACCACGCA GGTAAGGGTACGACATGGTGTCGCAGCTGTACGTGCAGCACCAGGGCGAGTTCGGCACCG CGGAG



consensusID : consensus_8800#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 660
fasta sequence
                              [ATCCCCGAGGTTAGTACGCGGGCGACTTAGCTTCGGCACGGCTTCAACATGACGCTCTTCATGAAGTACGAGCGCAACCATCTGGTGTGGAATCCCGTCTTCACGCTGATCGACCATATCGGCCGGCACATCGACATGTCGGCGGTGCACAAAAAGTTCGAGATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGTGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAAACATCATTGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATAATTAGGCCTGATCTTCACGATGCTGTCCGGCGGGTCGAGCGGTACTCGACGGCTCTTCAACTTTCCTGAAGGA]

[+] EMBL AL934990             [ATCCCCGAGGTTAGTACGCGGGCGACTTAGCTTCGGCACGGCTTCAACATGACGCTCTTCATGAAGTACGAGCGCAACCATCTGGTGTGGAATCCCGTCTTCACGCTGATCGACCATATCGGCCGGCACATCGACATGTCGGCGGTGCACAAAAAGTTCGAGATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGTGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCATCGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAATCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAGTTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAAACATCATTGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATAATTAGGCCTGATCTTCACGATGCTGTCCGGCGGGTCGAGCGGTACTCGACGGCTCTTCAACTTTCCTGAAGGA]


>consensus_8800#2 ATCCCCGAGGTTAGTACGCGGGCGACTTAGCTTCGGCACGGCTTCAACATGACGCTCTTC ATGAAGTACGAGCGCAACCATCTGGTGTGGAATCCCGTCTTCACGCTGATCGACCATATC GGCCGGCACATCGACATGTCGGCGGTGCACAAAAAGTTCGAGATGTACGTCCGCACGCTG CTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAG TGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCGCGCCGGGTACAAGCCGTGCAT CGAGGAGGCGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAA TCCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGA GTTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGT ACCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGA AACATCATTGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATAATTAGGCCTGATC TTCACGATGCTGTCCGGCGGGTCGAGCGGTACTCGACGGCTCTTCAACTTTCCTGAAGGA



consensusID : consensus_8800#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 317
fasta sequence
                              [ATCCCCCGAGGTCGTCTTCACGCTGATCGACCATATGGCGGCACATNACATGTCGGCGGGTGCACAAAAAGTTCGAGAATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCTGCGCCGTGGTTACAAGCCTGTGCATCGAGGAGTGCTGCAGCGCGCGTTCAAGAAGTTGGGATTGGACCAGCCCCGGACCCCGGGACGGCCTGGCAAAATCCCCCGGTTGGCCCGGCAAAAATT]

[+] EMBL AL930828             [ATCCCCCGAGGTCGTCTTCACGCTGATCGACCATATGGCGGCACATNACATGTCGGCGGGTGCACAAAAAGTTCGAGAATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTGGTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAAGAACTTCCTGTGCCTGCGCCGTGGTTACAAGCCTGTGCATCGAGGAGTGCTGCAGCGCGCGTTCAAGAAGTTGGGATTGGACCAGCCCCGGACCCCGGGACGGCCTGGCAAAATCCCCCGGTTGGCCCGGCAAAAATT]


>consensus_8800#3 ATCCCCCGAGGTCGTCTTCACGCTGATCGACCATATGGCGGCACATNACATGTCGGCGGG TGCACAAAAAGTTCGAGAATGTACGTCCGCACGCTGCTGACGCCACTGTACGAGGAGCTG GTCGGCAACCAGCAGGAGAGCGAGGAGATGTGGAAGGCGAACCTTCGCTCGCTGGCGAAG AACTTCCTGTGCCTGCGCCGTGGTTACAAGCCTGTGCATCGAGGAGTGCTGCAGCGCGCG TTCAAGAAGTTGGGATTGGACCAGCCCCGGACCCCGGGACGGCCTGGCAAAATCCCCCGG TTGGCCCGGCAAAAATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      CGAGCGGAACTGGAACCTGCTCGCGACCTTCCTGCAGAAGGAGGAAAGCCGCACCATGAT 60
consensus_8800#0      ------------------------------------------------------------
                                                                                  

consensus_8800#2      -------------------------------------ATCCCCGAGGTTAGTACGCGGGC 23
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      TCCGGTGTACACACGAGCGAAGCTGCTGCACGACGCCTGGAACCTGGCGTACGCGGGTGA 120
consensus_8800#0      ------------------------------------------------------------
                                                                                  

consensus_8800#2      GACTTAGCTTCGGCACGGCTTCAACATGACGCTCTTCATGAAGTACGAGCGCAACCATCT 83
consensus_8800#3      --------------------------------------------------------ATCC 4
consensus_8800#1      TCTTAGCTTCGGTACGGCCTTCAACATGACGCTCTTCATGAAGTACGAGCGCAACCATCT 180
consensus_8800#0      ---------------------------------------CCGTACCGCTGGTGGTGGTGC 21
                                                                               *  

consensus_8800#2      GGTGTGGAATCCCGTCTTCACGCTGAT--CGACCATATCGGCCGGCACATCGA-CATGTC 140
consensus_8800#3      CCCGAGG----TCGTCTTCACGCTGAT--CGACCATATGG--CGGCACATN-A-CATGTC 54
consensus_8800#1      GGTGTGGAATCCCGTCTTCACGCTGAT--CGACCATATCGGCCGGCACATCGA-CATGTC 237
consensus_8800#0      GGCAGGA----TCGGCTCAACTTCGGCAACGTCAGCACGATCCGGTGGATGAAGCAGGTG 77
                           *      ** **  **   *    ** *   *     ***   **  * ** ** 

consensus_8800#2      GGCGG-TGCACAAAAAGTTCGAGA-TGTACGTCCGCACG---CTGCTGACGCCACTGTAC 195
consensus_8800#3      GGCGGGTGCACAAAAAGTTCGAGAATGTACGTCCGCACG---CTGCTGACGCCACTGTAC 111
consensus_8800#1      GGCGG-TGCACAAAAAGTTCGAGA-TGTACGTCCGCACG---CTGCTGACGCCACTGTAC 292
consensus_8800#0      CGCGAGGTAACGCTGGA--CGAGCTGCCCGGACCGGACGAGTTCATCATCGTCAACCCGG 135
                       ***     **        ****       * *** ***          ** **      

consensus_8800#2      GAGGAGCTGGTCGGCAACCAGCAGG--AGAGCGAGGAGATGTGGAAGT-----GCGAACC 248
consensus_8800#3      GAGGAGCTGGTCGGCAACCAGCAGG--AGAGCGAGGAGATGTGGAAG------GCGAACC 163
consensus_8800#1      GAGGAGCTGGTCGGCAACCAGCAGG--AGAGCGAGGAGATGTGGAAG------GCGAACC 344
consensus_8800#0      AGGAGATTGGCCCGTTCCCGGTGAACTACGACGAGCGGAACTGGAACCTGCTCGCGACCT 195
                        *    *** * *   ** *      *   ****  **  *****       **** * 

consensus_8800#2      TTCGCTCGCTGGCGAAGAACTTC-CTGTGCC-GCGCCGGG--TACAAGCC-GTGCATCGA 303
consensus_8800#3      TTCGCTCGCTGGCGAAGAACTTC-CTGTGCCTGCGCCGTGGTTACAAGCCTGTGCATCGA 222
consensus_8800#1      TTCGCTCGCTGGCGAAGAACTTC-CTGTGCC-GCGCCGGG--TACAAGCC-GTGCATCGA 399
consensus_8800#0      TCCTGCAGAAGGAGGAAAGCCGCACTATGATTCCGGTGTACACACAAGCC-GTGCATCGA 254
                      * *    *  ** * * * *  * ** **    **  *     ******* *********

consensus_8800#2      GGAGG--CGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAAT 361
consensus_8800#3      GGAGTGCTGCAGCGCGCGTTCAAGAAGTTGG-GATTGGACCAGCCCCGGACCCCGGGACG 281
consensus_8800#1      GGAGG--CGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAAT 457
consensus_8800#0      GGAGG--CGCAGCGCGCGTTCAAGAAGTGGATGGACAGCCCGGACCCGGACGCGGGCAAT 312
                      ****    ******************** *  *    * ** * ******* * ** *  

consensus_8800#2      CCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAG 421
consensus_8800#3      GCCTGGCAAAATCCCCCGGTTGGCCCGGCAA--AAATT---------------------- 317
consensus_8800#1      CCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAG 517
consensus_8800#0      CCCGTGGCGAATCAGTTCATCTGCCCGGTGTTCAAGTGGGGCACGCGCGAGGAGTGGGAG 372
                       **  *   ****      *  ******     ** *                       

consensus_8800#2      TTTTGGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTA 481
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      TTT-GGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTA 576
consensus_8800#0      TTT-GGGCTGCAGCGCGTCATCAACTTCCCGGAGTCGCGCGTCAAGAGCGAGCGCACGTA 431
                                                                                  

consensus_8800#2      CCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAA 541
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      CCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAA 636
consensus_8800#0      CCTGCTGAAGACGCTGGCCGGCTGCCCGAGCCAACCGTTCAAGATCGACCGGCTGCTGAA 491
                                                                                  

consensus_8800#2      ACATCATTGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATAATTAGGCCTGATCT 601
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      C--ATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATT--AGCCTGATCT 692
consensus_8800#0      C--ATCATGGTGCTGGAGGACAACGGCAACTTTACCGACAACGATATT--AGCCTGATCT 547
                                                                                  

consensus_8800#2      TCACGATGCTGTCCGGCGGGTCGAGCGGTACTCGACGGCTCTTCAACTTTCCTGAAGGA- 660
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      TCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACA 752
consensus_8800#0      TCAAGATGCTGTCCGGCGGGTCGAGCGGCTACTCGACGCTCTTCAACTTCCTGAAGAACA 607
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCA 812
consensus_8800#0      ACTGGGATGCAATCAAGCTGCGCTTCAAGGACCGCGAGTCGCTGTGGGACAACATGATCA 667
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ACTCGGCGACCGGCCTGTTCACCACGCAGGTAAGGGTACGACATGGTGTCGCAGCTGTAC 872
consensus_8800#0      ACTCGGCGACCGGCCTGTTCACCACGCAGG-AAGGGTACGACATGGTGTCGCAGCTGTAC 726
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      GTGCAGCACCAGGGCGAGTTCGGCACCGCGGAG--------------------------- 905
consensus_8800#0      GTGCAGCACCAGGGCGAGTTCGGCACCGCGGAGCACATCATCGAGAAGTCGCTGAAGAAC 786
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ------------------------------------------------------------
consensus_8800#0      ATCAAGGAGGAGACGAAGTGGAGCGACGAGAATCTGCCGGTCATCGAGCAGTGGCTCGAC 846
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ------------------------------------------------------------
consensus_8800#0      CACTTCCTCGCCAGCAACGGCGTGGCGGACCAGAAGTTTCTCGGCTAGCCACCGCGTACG 906
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ------------------------------------------------------------
consensus_8800#0      GTGTGCGAATGAAGCGGTTGGATGTTGGACAGGCCGAGAGCAGATAGTACCAGGTCTGCG 966
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ------------------------------------------------------------
consensus_8800#0      GGCAATAGATGCACACGCATCTCACAGGGAAAGGAGCCACGAGAGAGAGAGAGATATATA 1026
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ------------------------------------------------------------
consensus_8800#0      GAGAGAGGATTGTCAAACGGTAGCTATTTGTTTTTTGCGTCTACTTCTTCCGTTTTTTTC 1086
                                                                                  

consensus_8800#2      ------------------------------------------------------------
consensus_8800#3      ------------------------------------------------------------
consensus_8800#1      ------------------------------------------------------------
consensus_8800#0      GTTGTTGTATCCTGCTCTAGAGAGATAGCGTAGCGCCTATAGTTAAGTGTCTGCTGTCCG 1146
                                                                                  

consensus_8800#2      ---------
consensus_8800#3      ---------
consensus_8800#1      ---------
consensus_8800#0      TGTCAAGCC 1155
                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)