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Anopheles gambiae
cluster # 8872 cluster # 8872       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8872#0 length = 1476 sequences # 9  
consensus_8872#1 length = 839 sequences # 3  

consensusID : consensus_8872#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1476
fasta sequence
                              [TTTTTTTTAGNTCAGAAATGTTTCTTTATTTTCTCCGCCCAGCAGATTACAAGAAGAACATGTATTGAAAAATATGTGTGTTTTTGTTCTGTACTGCACACTTCATCTGCACAATTAGATAAGCCAGGATGATGAGGAGGGAGATGTTAAATTCATCCTTTGCGCGGATGTAAACCGTTAGAGAGAGATACGTTTTCCATTGCATTATCAAATCAGGTACTTCCCTATCGTAATCTACATCTATTCTATGTTCTAGTGAGAAAATGAAATATTCGAAATACATTGTATCGATACACTTATAGCATGGAAGCAACCTGTGTTGGCTAGCAGAGACTGGCGGAGACGCCGCAACCATCCTGCACTTGGCGACAATGTAGAAATTATTTGCGCGCTAATTGTGACGAATTGAAAAATGAATGGCCACGCTCTTTCTTTAATTATTCCACCATTTGAATCGTGCGAATATGGTAACAGTTATGTGGCTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAAAGAAACTAAGCACGATATAGATTAAGAGTGTAAGATTTTTGCATGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGATGCGCTCAGCGTGAAACCGTTCGTGTTGGCGGTCGGGTCAAATGTTGGTTGTGGTGGGGAGAGTTAGCTGC-AAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACGATATATCGTTGGTCGTATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTT-CCG-GAAGGATGCGA-TTGTACTGCGCCGCC-CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGTACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGTTGTAGCGTGTTGCAGTGATTTGACCCACAGTGACAAGTCCCAAAGAACATGTTTCAACCCGCATACACA--------CACACGTCCCCGTGTTATGCGTGTCCCCGTTCGGGAGGGTTCCCCAATGCGGGAGATCGGAATGCCGATCGGGGTTGGGTTTGCAAATCGTTTATCGTTACAAAATAGATATTTACCAAACGATCCGATGGCGAAGCGCGTCCACAGCCAGGGAATAATAACGTGTCCAGTCCAACAGGGGGATGTTTTACCAATTTTGTTGAGATATACCGG]

[+] EMBL AGA283848            [TTTTTTTTAGNTCAGAAATGTTTCTTTATTTTCTCCGCCCAGCAGATTACAAGAAGAACATGTATTGAAAAATATGTGTGTTTTTGTTCTGTACTGCACACTTCATCTGCACAATTAGATAAGCCAGGATGATGAGGAGGGAGATGTTAAATTCATCCTTTGCGCGGATGTAAACCGTTAGAGAGAGATACGTTTTCCATTGCATTATCAAATCAGGTACTTCCCTATCGTAATCTACATCTATTCTATGTTCTAGTGAGAAAATGAAATATTCGAAATACAATGTATCGATACACTTATAGCATGGAAGCAACCTGTGTTGGCTAGCAGAAACTGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09FTN             [                tggtTTTCTTTATTTTCTCCGCCCAGCAGATTACAAGAAGAACATGTATTGAAAAATATGTGTGTTTTTGTTCTGTACTGCACACTTCATCTGCACAATTAGATAAGCCAGGATGATGAGGAGGGAGATGTTAAATTCATCCTTTGCGCGGATGTAAACCGTTAGAGAGAGATACGTTTTCCATTGCATTATCAAATCAGGTACTTCCCTATCGTAATCTACATCTATTCTATGTTCTAGTGAGAAAATGAAATATTCGAAATACATTGTATCGATACACTTATAGCATGGAAGCAACCTGTGTTGGCTAGCAGAGACTGGCGGAGACGCCGCAACCATCCTGCACTTGGCGACAATGTAGAAATTATTTGCGCGCTAATTGTGACGAATTGAAAAATGAATGGCCACGCTCTTTCTTTAATTATTCCACCATTTGAATCGTGCGAATATGGTAACAGTTATGTGGCTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAAAGAAACTAAGCACGATATAGCTTAAGAGTGTAAGATTTTTGCAAGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGACGCGCTCAGCGTGAAACCGTTCGTGTGGGCGGTCGAGTCAAAAGTTGGTTGTGGTGGGGAGAGTTAGCTGC AAACAAAATGAAGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAA GATATATCGCTGGTCGCATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAGTTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTT CCG GAAGGATGCGA TTGTACTGCGCCGCC CGGTTACGGGTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BX611260             [                      TCTTTATTTTCTCCGCCCAGCAGATTACAAGAAGAACATGTATTGAAAAATATGTGTGTTTTTGTTCTGTACTGCACACTTCATCTGCACAATTAGATAAGCCAGGATGATGAGGAGGGAGATGTTAAATTCATCCTTTGCGCGGATGTAAACCGTTAGAGAGAGATACGTTTTCCATTGCATTATCAAATCAGGTACTTCCCTATCGTAATCTACATCTATTCTATGTTCTAGTGAGAAAATGAAAAATTCGAAATACATTGTATCGATACACTTATAGCATGGAAGCAACCTGTGTTGGCTAGCAGAGACTGGCGGAGACGCCGCAACCATCCTGCACTTGGCGACAATGTAGAAATTATTTGCGCGCTAATTGTGACGAATTGAAAAATGAATGGCCACGCTCTTTCTTTAATTATTCCACCATTTGAATCGTGCGAATATGGTAACAGTTATGTGGCTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BM601569             [                                                                                                                                                                                                                                                                                                                                                                                                                     TTGAAAAATGAATCGCCACGCTCTTTCTTTAATTATTCCACCATTTGAATCGAGCGAATATGGTAACAGTTGTGTGGCTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAAAGAAACTAAGCACGATATAGATTAAGAGTGTAAGATTTTTGCATGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGATGCGCTCAGCGTGAAACCGTTCGTGTTGGCGGTCGGGTCAAATGTTGGTTGTGGTGGGGAGAGTTAGCTGC AAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTTCAGAATGCATCTCTTGTGGAACGATATATCGTTGGTCGTATTCTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTT CCG GAAGGATGCGA TTcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX622316             [                                                                                                                                                                                                                                                                                                                                                                                                                                             tctTTTAATTATTCCNCCATTTGAATCGAGCGAATATGGTAACAGTTGTGTGGCTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAAAGAAACTAAGCACGATATAGATTAAGAGTGTAAGATTTTTGCATGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGATGCGCTCAGCGTGAAACCGTTCGTGTTGGCGGTCGGGTCAAATGTTGGTTGTGGTGGGGAGAGTTAGCTGC AAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACGATATATCGTTGGTCGTATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTT CCG GAAGGATGCGA TTGTACTGCGCCGCC CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL BM603055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAAACTAAGCACGATATAGATTAAGAGTGTAAGATTTTTGCATGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGATGCGCTCAGCGTGAAACCGTTCGTGTTGGCGGTCGGGTCAAATGTTGGTTGTGGTGGGGAGAGTTAGCTGC AAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACGATATATCGTTGGTCGTATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTT CCG GAAGGATGCGA TTGTACTGCGCCGCC CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGTACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCcgg                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BM602704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAAACCGTTCGTGTTGGCGGTCGGGTCAAATGTTGGTTGTGGTGGGGAGAGTTAGCTGC AAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACGATATATCGTTGGTCGTATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTT CCG GAAGGATGCGA TTGTACTGCGCCGCC CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGTACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGTTGTAGCGTGTTGCAGTGATTTGACCCACAGTGACAAGTCCCAAAGAACATGTTTCAACCCGCATACACA        CACACGTCCCCGTGTTATGCGTGTCCCCGTTCGG                                                                                                                                                                                   ]
[-] EMBL BM651723             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAGCTGCAAAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACGATATATCGTTGGTCGTATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTT CCG GAAGGATGCGA TTGTACTGCGCCGCC CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGTACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTAGCACCAAGATTTGCgg                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF541602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              nnATTTNCCGNNANGGATGNNATTTGTACTGCGCCGCCNCGGTTACGGGTAGTTTTCTGCTNCCAGTCTNCCACTTCGGCNTCGGCAGGTCNTCGTCCGCGGAACGATGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGGACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTAGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGTTGTAGCGTGTTGCAGTGATTTGACCCACAGTGACAAGTCCCAAAGAACATGTTTCAACCCGCATACACACACACGCGCACACGTCCCCGTGTTATGCGTGTCCCCGTTTGAGAGGGTTCCCCAATGCGGGAGATCGGAATGCCGATCGGGGTTGGGTTTGCAAATCGTTTATCGTTACAAAATAGATATTTACCAAACGATCCGATGGCGAAGCGCGTCCACAGCCAGGGAATAATAACGTGTCCAGTCCAACAGGGGGATGTTTTACCAATTTTGTTGAGATATACCGG]


>consensus_8872#0 TTTTTTTTAGNTCAGAAATGTTTCTTTATTTTCTCCGCCCAGCAGATTACAAGAAGAACA TGTATTGAAAAATATGTGTGTTTTTGTTCTGTACTGCACACTTCATCTGCACAATTAGAT AAGCCAGGATGATGAGGAGGGAGATGTTAAATTCATCCTTTGCGCGGATGTAAACCGTTA GAGAGAGATACGTTTTCCATTGCATTATCAAATCAGGTACTTCCCTATCGTAATCTACAT CTATTCTATGTTCTAGTGAGAAAATGAAATATTCGAAATACATTGTATCGATACACTTAT AGCATGGAAGCAACCTGTGTTGGCTAGCAGAGACTGGCGGAGACGCCGCAACCATCCTGC ACTTGGCGACAATGTAGAAATTATTTGCGCGCTAATTGTGACGAATTGAAAAATGAATGG CCACGCTCTTTCTTTAATTATTCCACCATTTGAATCGTGCGAATATGGTAACAGTTATGT GGCTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAAAGAAACTAAGCACGATATAG ATTAAGAGTGTAAGATTTTTGCATGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGA TGCGCTCAGCGTGAAACCGTTCGTGTTGGCGGTCGGGTCAAATGTTGGTTGTGGTGGGGA GAGTTAGCTGCAAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGC ATCTCTTGTGGAACGATATATCGTTGGTCGTATTTTGCATGCTTCGCACTCTGTATGCCA TTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATT CAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAG CTGCTGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCC CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCG CGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCG TCCGGTCGTACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCC GTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGTTGTAGC GTGTTGCAGTGATTTGACCCACAGTGACAAGTCCCAAAGAACATGTTTCAACCCGCATAC ACACACACGTCCCCGTGTTATGCGTGTCCCCGTTCGGGAGGGTTCCCCAATGCGGGAGAT CGGAATGCCGATCGGGGTTGGGTTTGCAAATCGTTTATCGTTACAAAATAGATATTTACC AAACGATCCGATGGCGAAGCGCGTCCACAGCCAGGGAATAATAACGTGTCCAGTCCAACA GGGGGATGTTTTACCAATTTTGTTGAGATATACCGG



consensusID : consensus_8872#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 839
fasta sequence
                              [CTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAANGAAACTAAGCACGATATAGCTTAAGAGTGTAAGATTTTTGCAAGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGACGCGCTCAGCGTGAAACCGTTCGTGTGGGCGGTCGAGTCAAAAGTTGGTTGTGGTGGGGAGAGTTAGCTGCAAACAAAATGAAGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACG--ATATCGCTGGTCGCATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAGTTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCCCGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGGACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGAATGTCGGTCTCCAACTTGTCGCCGATCATCACGCACTGGCCGGGCGGGACACCTAGATAGTGGCAAGCTGCGTAAAAGATATTGCGATCGGGCTTGGCCCACGGTAAATCAGAGGATACCAATATGCAA]

[-] EMBL BX622416             [CTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAANGAAACTAAGCACGATATAGCTTAAGAGTGTAAGATTTTTGCAAGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGACGCGCTCAGCGTGAAACCGTTCGTGTGGGCGGTCGAGTCAAAAGTTGGTTGTGGTGGGGAGAGTTAGCTGCAAACAAAATGAAGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACG  ATATCGCTGGTCGCATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAGTTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCCCGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGGACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGAATGTCGGTCTCCAACTTGTCGCCGATCATCACGCACTGGCCGGGCGGGACACCTAGATAGTGGCAAGCTGCGTAAAAGATATTGCGATCGGGCTTGGCCCACGGTAAATCAGAGGATACCAATATGCAA]
[-] EMBL BX610090             [                                                                                                                                                      TCGAGTCAAAAGTTGGTTGTGGTGGGGAGAGTTAGCTGCAAACAAAATGAAGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCATCTCTTGTGGAACGATATATCGCTGGTCGCATTTTGCATGCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAGTTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCCCGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGGACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACC                                                                                                                                     ]
[-] EMBL AGA285141            [                                                                                                                                                                                                                                                                                      GCTTCGCACTCTGTATGCCATTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAGTTCAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGCTGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCCCGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCGGTCGGACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGC                                                                                                                                                 ]


>consensus_8872#1 CTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAANGAAACTAAGCACGATATAGCT TAAGAGTGTAAGATTTTTGCAAGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGACG CGCTCAGCGTGAAACCGTTCGTGTGGGCGGTCGAGTCAAAAGTTGGTTGTGGTGGGGAGA GTTAGCTGCAAACAAAATGAAGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGCAT CTCTTGTGGAACGATATCGCTGGTCGCATTTTGCATGCTTCGCACTCTGTATGCCATTGC TGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAGTTCAGC TGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAGCTGC TGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCCCGGT TACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCGCGGA ACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCGTCCG GTCGGACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCCGTAG GCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGAATGTCGGTCT CCAACTTGTCGCCGATCATCACGCACTGGCCGGGCGGGACACCTAGATAGTGGCAAGCTG CGTAAAAGATATTGCGATCGGGCTTGGCCCACGGTAAATCAGAGGATACCAATATGCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8872#0      TTTTTTTTAGNTCAGAAATGTTTCTTTATTTTCTCCGCCCAGCAGATTACAAGAAGAACA 60
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      TGTATTGAAAAATATGTGTGTTTTTGTTCTGTACTGCACACTTCATCTGCACAATTAGAT 120
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      AAGCCAGGATGATGAGGAGGGAGATGTTAAATTCATCCTTTGCGCGGATGTAAACCGTTA 180
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      GAGAGAGATACGTTTTCCATTGCATTATCAAATCAGGTACTTCCCTATCGTAATCTACAT 240
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      CTATTCTATGTTCTAGTGAGAAAATGAAATATTCGAAATACATTGTATCGATACACTTAT 300
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      AGCATGGAAGCAACCTGTGTTGGCTAGCAGAGACTGGCGGAGACGCCGCAACCATCCTGC 360
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      ACTTGGCGACAATGTAGAAATTATTTGCGCGCTAATTGTGACGAATTGAAAAATGAATGG 420
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      CCACGCTCTTTCTTTAATTATTCCACCATTTGAATCGTGCGAATATGGTAACAGTTATGT 480
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      GGCTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAAAGAAACTAAGCACGATATAG 540
consensus_8872#1      --CTCAATCTCATCGTTAAAATGGAGAGACAAAGTAGGAANGAAACTAAGCACGATATAG 58
                        ************************************** *******************

consensus_8872#0      ATTAAGAGTGTAAGATTTTTGCATGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGA 600
consensus_8872#1      CTTAAGAGTGTAAGATTTTTGCAAGAAATAGTATAAAGGGAATAAGAAAAGCGATAGGGA 118
                       ********************** ************************************

consensus_8872#0      TGCGCTCAGCGTGAAACCGTTCGTGTTGGCGGTCGGGTCAAATGTTGGTTGTGGTGGGGA 660
consensus_8872#1      CGCGCTCAGCGTGAAACCGTTCGTGTGGGCGGTCGAGTCAAAAGTTGGTTGTGGTGGGGA 178
                       ************************* ******** ****** *****************

consensus_8872#0      GAGTTAGCTGCAAACAAAATGAGGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGC 720
consensus_8872#1      GAGTTAGCTGCAAACAAAATGAAGGGGCATCGTGTGTGGGAAACATATCTTACAGAATGC 238
                      ********************** *************************************

consensus_8872#0      ATCTCTTGTGGAACGATATATCGTTGGTCGTATTTTGCATGCTTCGCACTCTGTATGCCA 780
consensus_8872#1      ATCTCTTGTGGAACGATA--TCGCTGGTCGCATTTTGCATGCTTCGCACTCTGTATGCCA 296
                      ******************  *** ****** *****************************

consensus_8872#0      TTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAATT 840
consensus_8872#1      TTGCTGCTGCACGCTGTGCTCCTCTCTCATCATTTGTTTGGATAGGAGAATCGGCAAGTT 356
                      ********************************************************* **

consensus_8872#0      CAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAG 900
consensus_8872#1      CAGCTGCTGTTGTTGCTGCTGTTGCTGCCATTGCTATGCTGACTGCAGTCGTTGCTGGAG 416
                      ************************************************************

consensus_8872#0      CTGCTGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCC 960
consensus_8872#1      CTGCTGTACGTGCTGTAAAGATCGGGAATTTCCGGAAGGATGCGATTGTACTGCGCCGCC 476
                      ************************************************************

consensus_8872#0      CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCG 1020
consensus_8872#1      CGGTTACGGGTAGTTTTCTGCTCCCAGTCTCCAACTTCGGCTTCGGCAGGTCTTCGTCCG 536
                      ************************************************************

consensus_8872#0      CGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCG 1080
consensus_8872#1      CGGAACGACGTCGAGGGCGGTAACATGGCGGGTAGTTTCAGCACACTGTCCACGATCGCG 596
                      ************************************************************

consensus_8872#0      TCCGGTCGTACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCC 1140
consensus_8872#1      TCCGGTCGGACATGCTCCGGCACATCCTGCATCGTCCTGTCTCCGATAATGCGTTGCTCC 656
                      ******** ***************************************************

consensus_8872#0      GTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTGTTGTAGC 1200
consensus_8872#1      GTAGGCAGCGGAAGCCAAACCGTCGCACCAAGATTTGCCTCAATACCACCCTG----AAT 712
                      *****************************************************    *  

consensus_8872#0      GTGTTGCAGTGATTTGACCCACAGTGACAAGTCCCAAAGAACATGTTTCAACCCGCATAC 1260
consensus_8872#1      GTCGGTCTCCAACTTGTCGCCGATCATCACGCACT----GGCCGGGCGGGACACCTAGAT 768
                      **    *    * *** * *  *    ** *  *       *  *     ** *  * * 

consensus_8872#0      ACACACACGTCCCCGTGTTATGCGTGTCCCCGTTCGGGAGGGTTCCCCAATGCGGGAGAT 1320
consensus_8872#1      AGTGGCAAG---CTGCGTAAAAGATATTGC-GATCGGGCTTGGCCCACGGTAAATCAGA- 823
                      *    ** *   * * ** *    * *  * * *****   *  ** *  *     *** 

consensus_8872#0      CGGAATGCCGATCGGGGTTGGGTTTGCAAATCGTTTATCGTTACAAAATAGATATTTACC 1380
consensus_8872#1      --GGATACCAATATGCAA------------------------------------------ 839
                        * ** ** **  *                                             

consensus_8872#0      AAACGATCCGATGGCGAAGCGCGTCCACAGCCAGGGAATAATAACGTGTCCAGTCCAACA 1440
consensus_8872#1      ------------------------------------------------------------
                                                                                  

consensus_8872#0      GGGGGATGTTTTACCAATTTTGTTGAGATATACCGG 1476
consensus_8872#1      ------------------------------------
                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)