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Anopheles gambiae
cluster # 8873 cluster # 8873       Sequences # 12       consensus # 8


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8873#0 length = 968 sequences # 3  
consensus_8873#1 length = 947 sequences # 2  
consensus_8873#2 length = 925 sequences # 1  
consensus_8873#3 length = 811 sequences # 2  
consensus_8873#4 length = 642 sequences # 1  
consensus_8873#5 length = 614 sequences # 1  
consensus_8873#6 length = 588 sequences # 1  
consensus_8873#7 length = 469 sequences # 1  

consensusID : consensus_8873#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 968
fasta sequence
                              [TTCGCGGACCGACAAGCGACAGATTGCAAACATAAACACAAATCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCG-AACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCANGGCGTCCAGAATGCGAGCCCNGGCGGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGAACAAAAGATTGAATTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGC]

[+] EMBL BX621004             [TTCGCGGACCGACAAGCGACAGATTGCAAACATAAACACAAATCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCG AACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCANGGCGTCCAGAATGCGAGCCCNGGCG                                                                                                                                                                                                                                                                          ]
[+] EMBL BM605159             [            ccgGCGACAGATTGCAAACATAAACACAAATCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACATCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCG AACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGA                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS09IQR             [                                 tgttatattTCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAG AGCGAAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCC GGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGAACAAAAGATTGAATTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGC]


>consensus_8873#0 TTCGCGGACCGACAAGCGACAGATTGCAAACATAAACACAAATCGGCGTGTTATTTCGCT TTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAA ATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACA AAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTT CCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTC TTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACC TTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGA CGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAAC ACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGA TCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAA TGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAAT CATCGCCGGAGAAGCANGGCGTCCAGAATGCGAGCCCNGGCGGACATTCAGAAGATTAAG GAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAG TCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAG CTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACT GAACAAAAGATTGAATTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGT GCCCGGGC



consensusID : consensus_8873#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 947
fasta sequence
                              [CTACCTTAGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAAAACACTGAACAAAAGATTGAATTACACCATTACATCGGTTTTCGACTATCTCACTATCTCTAAAATGCGAAATTTCGTCAAGATACTTTCCAGCGTCCAGCGCTTGGTCGGATCTTTCTGAATCATCATATCACATAGGACCTGTAGGGCGGAACTGTAT---CCCA-GCCGCTTGCAATCGAGCTGTGGCACACTAAATTTCTGGTTTCGCCTTTTCCCGAACCGATCGACGAAGGGATGCTCCAGCATGCACAGTTCATAGAAGAAAATGCCCAGCGCCCATACATCGCTTTTATAGTCGTAATCCTTGCCTCGGGCAACCTCGGGGGCCATGTACAGCGGTGTCCCAACGATAGTCCGGTTCAAATCGTCTTCGTGCATAATCTTTGAGATACCAAAGTCGGCCAATTTCAATCGGTTATCGATACAAATCAGTACGTTGGCTGGCTTCAGGTCACGATGAATAACATTTCGCTGGTGCAAATACACGAGACCGTCAGCAATGTCTCCAAATTTGGCCATTACAGCGTGCTGATTCAGAAAGGCGCCTTCGCGCCAAGCGTCGCTCGAGAAACGTTGCCAAATTGCCTCGTTCTGCATACTCCAGGACGATGTTCCAACTGGTGGTTGTTTGATAGTAGCCCCGATACTGTATGATTCGTGGATGGCAAAGTTGAGAAAGAATTGTGTGCTCTTTCAGTACCGCCGTGTAGGCATAATCCGGACTATTGAATGGAATGCTTTTGATCACGATGAGTTGGTCATTGTATCGATATAAACCTACGGAACTTCCGAAACAACCTTGCAAGAACTACGCATAAATTTAAGGCTGAATTATTGAATTGATCCATGGTTCTG]

[+] EMBL CNS08TJK             [CTACCTTAGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAAAACACTGAACAAAAGATTGAATTACACCATTACATCGGTTTTCGACTATCTCACTATCTCTAAAATGCGAAATTTCGTCAAGATACTTTCCAGCGTCCAGCGCTTGGTCGGATCTTTCTGAATCATCATATCACATAGGACCTGTAGGGCGGAACTGTAT   CCCA GCCGCTTGCAATCGAGCTGTGGCACACTAAATTTCTGGTTTCGCCTTTTCCCGAACCGATCGACGAAGGGATGCTCCAGCATGCACAGTTCATAGAAGAAAATGCCCAGCGCCCATACATCGCTTTTATAGTCGTAATCCTTGCCTCGGGCAACCTCGGGGGCCATGTACAGCGGTGTCCCAACGATAGTCCGGTTCAAATCGTCTTCGTGCATAATCTTTGAGATACCAAAGTCGGCCAATTTCAATCGGTTATCGATACAAATCAGTACGTTGGCTGGCTTCAGGTCACGATGAATAACATTTCGCTGGTGCAAATACACGAGACCGTCAGCAATGTCTCCAAATTTGGCCATTACAGCGTGCTGATTCAGAAAGGCGCCTTCGCGCCAAGCGTCGCTCGAGAAACGTTGCCAAATTGCCTCGTTCTGCATACTCCAGGACGATGTTCCAACTGGTGGTTGTTTGATAGTAGCCCCGATACTGTATGATTCGTGGATGGCAAAGTTGAGAAAGAATTGTGTGCTCTTTCAGTACCGCCGTGTAGGCATAATCCGGACTATTGAATGGAATGCTTTTGATCACGATGAGTTGGTCATTGTATCGATATAAACCTACGGAACTTCCGAAACAACCTTGCAAGAACTA                                            ]
[-] EMBL CNS08TJJ             [                                                                                                                                                                                          GTCCAGCGCTTGGTCGGATCTTTCTGAATCATCATATCACATAGGACCTGTAGGGCGGAACTGTATGCGCGCAGGCCGCTTGCAATCGAGCTGTGGCACACTAAATTTCTGGTTTCGCCTTTTCCCGAACCGATCGACGAAGGGATGCTCCAGCATGCACAGTTCATAGAAGATAATGCCCAGCGCCCATACATCGCTTTTATAGTCGTAATCCTTGCCTCGGGCAACCTCGGGGGCCATGTACAGCGGTGTCCCAACGATAGTCCGGTTCAAATCGTCTTCGTGCATAATCTTTGAGATACCAAAGTCGGCCAATTTCAATCGGTTATCGATACAAATCAGTACGTTGGCTGGCTTCAGGTCACGATGAATAACATTTCGCTGGTGCAAATACACGAGACCGTCAGCAATGTCTCCAAATTTGGCCATTACAGCGTGCTGATTCAGAAAG  GCCTTCG GCCAAGCGTCGCTCGAGAAACGTTGCCAAATTGCCTCGTTCTGCATACTCCAGGACGATGTTCCAACTGGTGGTTGTTTGATAGTAGCCCCGATACTGTATGATTCGTGGATGGCAAAGTTGAGAAAGAATTGTGTGCTCTTTCAGTACCGCCGTGTAGGCATAATCCGGACTATTGAATGGAATGCTTTTGATCACGATGAGTTGGTCATTGTATCGATATAAA CTACGGAACTTCCGAAACAACCTTGCAAGAACTACGCATAAATTTAAGGCTGAATTATTGAATTGATCCATGGTTCTG]


>consensus_8873#1 CTACCTTAGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAAT ACACGATACAGCTGGTCGAGAAGGGCGTGAAAAACACTGAACAAAAGATTGAATTACACC ATTACATCGGTTTTCGACTATCTCACTATCTCTAAAATGCGAAATTTCGTCAAGATACTT TCCAGCGTCCAGCGCTTGGTCGGATCTTTCTGAATCATCATATCACATAGGACCTGTAGG GCGGAACTGTATCCCAGCCGCTTGCAATCGAGCTGTGGCACACTAAATTTCTGGTTTCGC CTTTTCCCGAACCGATCGACGAAGGGATGCTCCAGCATGCACAGTTCATAGAAGAAAATG CCCAGCGCCCATACATCGCTTTTATAGTCGTAATCCTTGCCTCGGGCAACCTCGGGGGCC ATGTACAGCGGTGTCCCAACGATAGTCCGGTTCAAATCGTCTTCGTGCATAATCTTTGAG ATACCAAAGTCGGCCAATTTCAATCGGTTATCGATACAAATCAGTACGTTGGCTGGCTTC AGGTCACGATGAATAACATTTCGCTGGTGCAAATACACGAGACCGTCAGCAATGTCTCCA AATTTGGCCATTACAGCGTGCTGATTCAGAAAGGCGCCTTCGCGCCAAGCGTCGCTCGAG AAACGTTGCCAAATTGCCTCGTTCTGCATACTCCAGGACGATGTTCCAACTGGTGGTTGT TTGATAGTAGCCCCGATACTGTATGATTCGTGGATGGCAAAGTTGAGAAAGAATTGTGTG CTCTTTCAGTACCGCCGTGTAGGCATAATCCGGACTATTGAATGGAATGCTTTTGATCAC GATGAGTTGGTCATTGTATCGATATAAACCTACGGAACTTCCGAAACAACCTTGCAAGAA CTACGCATAAATTTAAGGCTGAATTATTGAATTGATCCATGGTTCTG



consensusID : consensus_8873#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 925
fasta sequence
                              [GAATTCCTCGAGAACTGTTGGCCAACTGGCAGATTGCAAACATAAACACAAATCGGCGTGTTTTTTCGCTTTTTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCCTTTCGCGATCGAGAGCTAAACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCCCCTGGCCCGATTGAAGTTTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAAAACTACCGTGAGTTTGTTGCTTTCCGTTTCCCCAACTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGAACAAATAAACCAAAA]

[-] EMBL CNS09IQS             [GAATTCCTCGAGAACTGTTGGCCAACTGGCAGATTGCAAACATAAACACAAATCGGCGTGTTTTTTCGCTTTTTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCCTTTCGCGATCGAGAGCTAAACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCCCCTGGCCCGATTGAAGTTTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAAAACTACCGTGAGTTTGTTGCTTTCCGTTTCCCCAACTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGAACAAATAAACCAAAA]


>consensus_8873#2 GAATTCCTCGAGAACTGTTGGCCAACTGGCAGATTGCAAACATAAACACAAATCGGCGTG TTTTTTCGCTTTTTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCA GATCTAATAAATCAGTCCATGCAGTACATGAACCCCTTTCGCGATCGAGAGCTAAACTTA CGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACG ATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCCCCTGGCCCGATTG AAGTTTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCC CTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTG GAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCC ACCAAGCAAAACTACCGTGAGTTTGTTGCTTTCCGTTTCCCCAACTACGGCTGCTAGATT TCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGG GCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCAC TCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGA AGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCA TGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCG AGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGA AATACACTGAACAAATAAACCAAAA



consensusID : consensus_8873#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 811
fasta sequence
                              [CCGCGGACGCGTGGGTCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGGCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCAACGCTAGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCTCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATTCAGGAGCTCGGTGACTTGGAACCTCTGACGAAGCTGCCGAACCTCGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGGCGACATTCAGAAGATTAAGGGAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGTAACGAATCGCATTCCATTAATTATT]

[+] EMBL BM613103             [CCGCGGACGCGTGGGTCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGGCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCAACGCTAGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCTCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATTCAGGAGCTCGGTGACTTGGAACCTCTGACGAAGCTGCCGAACCTCGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGGCGACATTCAGAAGATTAAGGGA                                                                                                                   ]
[+] EMBL BX628488             [                  GCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCT  ACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCG CCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGTAACGAATCGCATTCCATTAATTATT]


>consensus_8873#3 CCGCGGACGCGTGGGTCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGGCC CGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGT GTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTG CAACGCTAGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACG GTTTTCCGCGCCTGGCTCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAA TTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACA ACATTCAGGAGCTCGGTGACTTGGAACCTCTGACGAAGCTGCCGAACCTCGAGACGCTCA GCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTT TCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGA ACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGA AACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCCGGAGAAGCAGGCCGTCCAG AATGCGAGCCCGGGCGACATTCAGAAGATTAAGGGAGCCATCAAGCGAGCGACGAATCTG CACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTG AACGGTAACGAATCGCATTCCATTAATTATT



consensusID : consensus_8873#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 642
fasta sequence
                              [CCGCCCACGCGTCCGCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGTA]

[+] EMBL BM656317             [CCGCCCACGCGTCCGCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGTA]


>consensus_8873#4 CCGCCCACGCGTCCGCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGA TCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGA AGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCC TTCCCAACCTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGG AACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCA CCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATT TCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGG GCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCAC TCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGA AGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCA TGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGTA



consensusID : consensus_8873#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence
                              [GAATNCCCCCGAGGTTAAAAAAGTCCGAAAATGGTGNAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGTGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACCTACCGTGAGTATGTTGCTTTCCGTTTCCCCAAACTACGNGCTGCTAGATTANCCGCCAAGATCCGGCAAAAAGGAGCGCGACAGCAGACGAACCTACTGTCAAGTCGAAGAAGGGCANAGAAATGCACCAAAGAAATCGTACGGAAAGCGAAACAAGCGTGCCGGCCGGTGCACATCGGTGAAATCATCGCGG]

[+] EMBL AL692597             [GAATNCCCCCGAGGTTAAAAAAGTCCGAAAATGGTGNAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGTGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACTTCAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACCTACCGTGAGTATGTTGCTTTCCGTTTCCCCAAACTACGNGCTGCTAGATTANCCGCCAAGATCCGGCAAAAAGGAGCGCGACAGCAGACGAACCTACTGTCAAGTCGAAGAAGGGCANAGAAATGCACCAAAGAAATCGTACGGAAAGCGAAACAAGCGTGCCGGCCGGTGCACATCGGTGAAATCATCGCGG]


>consensus_8873#5 GAATNCCCCCGAGGTTAAAAAAGTCCGAAAATGGTGNAACTTACACCAGATCTAATAAAT CAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGTGTACAA AATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTC CGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCT TCTGAACAACAACCGGATTGTGAGAATTGGTGAAAACCTTCACGAATCCCTTCCCAACTT CAGAGTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACG AAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACAC CTACCGTGAGTATGTTGCTTTCCGTTTCCCCAAACTACGNGCTGCTAGATTANCCGCCAA GATCCGGCAAAAAGGAGCGCGACAGCAGACGAACCTACTGTCAAGTCGAAGAAGGGCANA GAAATGCACCAAAGAAATCGTACGGAAAGCGAAACAAGCGTGCCGGCCGGTGCACATCGG TGAAATCATCGCGG



consensusID : consensus_8873#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 588
fasta sequence
                              [GAATCGGCCGAGGACTTATCCAGGAGCTCGGTGATTNCGGAAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGAACAAAAGATTGAATTANAACAAACNNAGAGCAGCAGACGAGAACAACACANCAACN]

[+] EMBL BX466304             [GAATCGGCCGAGGACTTATCCAGGAGCTCGGTGATTNCGGAAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGGAAGGGCAAAGAAATGCACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGAACAAAAGATTGAATTANAACAAACNNAGAGCAGCAGACGAGAACAACACANCAACN]


>consensus_8873#6 GAATCGGCCGAGGACTTATCCAGGAGCTCGGTGATTNCGGAAACCTCTGACGAAGCTGCC GAACCTTGAGACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACTACCGTGA GTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAA GGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGGAAGGGCAAAGAAATGCACAAAG AAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGG AGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGATTAAGGAAGCCATCA AGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAA TTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCG AACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGAACAAAAGA TTGAATTANAACAAACNNAGAGCAGCAGACGAGAACAACACANCAACN



consensusID : consensus_8873#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 469
fasta sequence
                              [ATCGCCACGAGGTGTAAGCGTTTTCGCGGACGACANNGCGACAGATTGCAAACATAAACACAAATCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAAGCAGACAAGCCGGATCTGTGAGAACTTGGTCGNAANAACCTTCNAGCGAGATCCCGTTGCGCCAGAGCCGTTACAGGAGGTATCACTGTCTGACCGGGGNNAGACAGAGCAGTCCAGGGAGCCTCGGGTGATTCTGGAAC]

[+] EMBL BX469252             [ATCGCCACGAGGTGTAAGCGTTTTCGCGGACGACANNGCGACAGATTGCAAACATAAACACAAATCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTGAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGAGAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGATCAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGAAGCAGACAAGCCGGATCTGTGAGAACTTGGTCGNAANAACCTTCNAGCGAGATCCCGTTGCGCCAGAGCCGTTACAGGAGGTATCACTGTCTGACCGGGGNNAGACAGAGCAGTCCAGGGAGCCTCGGGTGATTCTGGAAC]


>consensus_8873#7 ATCGCCACGAGGTGTAAGCGTTTTCGCGGACGACANNGCGACAGATTGCAAACATAAACA CAAATCGGCGTGTTATTTCGCTTTCTTTCCTTTGCACCAGAAAAAGTCCCGAAAATGGTG AAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCGA GAGCTAGACTTACGGGGGTACAAAATACCACAGATTGAGAATATGGGTGCGACGCTGGAT CAGTACGATACGATCGACTTTTCCGACAACGACATCCGCAAGTTGGACGGTTTTCCGCGC CTGGCCCGATTGAAGTGTCTTCTTCTGAAGCAGACAAGCCGGATCTGTGAGAACTTGGTC GNAANAACCTTCNAGCGAGATCCCGTTGCGCCAGAGCCGTTACAGGAGGTATCACTGTCT GACCGGGGNNAGACAGAGCAGTCCAGGGAGCCTCGGGTGATTCTGGAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8873#0      ----------------------TTCGCGGACCGACAAGCGACAGATTGCAAACATAAACA 38
consensus_8873#7      ATCGCCACGAGGTGTAAGCGTTTTCGCGGACGACANNGCGACAGATTGCAAACATAAACA 60
consensus_8873#5      ------------------------------------------------------------
consensus_8873#3      -------------------------------------------------CCGCGGACGCG 11
consensus_8873#4      ------------------------------------------------------------
consensus_8873#2      ------------GAATTCCTCGAGAACTGTTGGCCAACTGGCAGATTGCAAACATAAACA 48
consensus_8873#6      ----------------------------------GAATCGGCCGAGGACTTATCCAGGAG 26
consensus_8873#1      ---------------------------------CTACCTTAGGCGCTAACGGTTCTGAAG 27
                                                                                  

consensus_8873#0      CAAATCGGCGTGTTATTTCGCTTTCTTTCCT-TTGCACCAGAAAAAGTCCCGAAAATGGT 97
consensus_8873#7      CAAATCGGCGTGTTATTTCGCTTTCTTTCCT-TTGCACCAGAAAAAGTCCCGAAAATGGT 119
consensus_8873#5      -----------------------GAATNCCC-CCGAGGTTAAAAAAGTCC-GAAAATGGT 35
consensus_8873#3      TGGGTCGGCGTGTTATTTCGCTTTCTTTCCT-TTGCACCAGAAAAAGGCCCGAAAATGGT 70
consensus_8873#4      ------------------------------------------------------------
consensus_8873#2      CAAATCGGCGTGTTTTTTCGCTTTTTTTCCT-TTGCACCAGAAAAAGTCCCGAAAATGGT 107
consensus_8873#6      CTCGGTGATTNCGGAAACCTCTGACGAAGCTGCCGAACCTTGAGACGCTC--AGCTTGCT 84
consensus_8873#1      CCGAGTAAAAGCTCCGAT-TCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGC 86
                                                                                  

consensus_8873#0      GAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCG 157
consensus_8873#7      GAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCG 179
consensus_8873#5      GNAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCG 95
consensus_8873#3      GAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCGTGTCGCGATCG 130
consensus_8873#4      ------------------------------------------------------------
consensus_8873#2      GAAACTTACACCAGATCTAATAAATCAGTCCATGCAGTACATGAACCCCTTTCGCGATCG 167
consensus_8873#6      GA--CGAATCCCGTATCCACCAAGCAACACTACCGTGAGTATGT-TGCTTTCCGTTTCCC 141
consensus_8873#1      GTGAAAAACACTGAACAAAAGATTGAATTACACCATTACATCGGTTTTCGACTATCTCAC 146
                                                                                  

consensus_8873#0      AGAGCTAGACTTACGGGG---GTACAAAATACCACAGATTG---AGAATATGGGTGCGAC 211
consensus_8873#7      AGAGCTAGACTTACGGGG---GTACAAAATACCACAGATTG---AGAATATGGGTGCGAC 233
consensus_8873#5      AGAGCTAGACTTACGGGGT--GTACAAAATACCACAGATTG---AGAATATGGGTGCGAC 150
consensus_8873#3      AGAGCTAGACTTACGGGG---GTACAAAATACCACAGATTG---AGAATATGGGTGCAAC 184
consensus_8873#4      ---------------CCGC--CCACGCGTCCGCACAGATTG---AGAATATGGGTGCGAC 40
consensus_8873#2      AGAGCTAAACTTACGGGG---GTACAAAATACCACAGATTG---AGAATATGGGTGCGAC 221
consensus_8873#6      CAACCTACGGCTGCTAGATTTCCGCAAGATCCGGCAAAAGG---AGCGCGAAGCAGCGAA 198
consensus_8873#1      TATCTCTAAAATGCGAAATTTCGTCAAGATACTTTCCAGCGTCCAGCGCTTGGTCGGATC 206
                                              *            *  *   **      *  *    

consensus_8873#0      GCTG--GATCAGTACGAT--ACGATCGACTTTTCCGACAACGACATCC-----GCAAGTT 262
consensus_8873#7      GCTG--GATCAGTACGAT--ACGATCGACTTTTCCGACAACGACATCC-----GCAAGTT 284
consensus_8873#5      GCTG--GATCAGTACGAT--ACGATCGACTTTTCCGACAACGACATCC-----GCAAGTT 201
consensus_8873#3      GCTA--GATCAGTACGAT--ACGATCGACTTTTCCGACAACGACATCC-----GCAAGTT 235
consensus_8873#4      GCTG--GATCAGTACGAT--ACGATCGACTTTTCCGACAACGACATCC-----GCAAGTT 91
consensus_8873#2      GCTG--GATCAGTACGAT--ACGATCGACTTTTCCGACAACGACATCC-----GCAAGTT 272
consensus_8873#6      CCTACTGTTCAAGTCGAAGGAAGGGCAAAGAAATGCACAAAGAAATCGTT-CGGAAAGCG 257
consensus_8873#1      TTTCTGAATCATCATATCACATAGGACCTGTAGGGCGGAACTGTATCCCAGCCGCTTGCA 266
                        *     ***         *                 **    ***      *   *  

consensus_8873#0      GGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGA--AC--AACAA-CCGG 317
consensus_8873#7      GGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGA--AGCAGACAAGCCGG 342
consensus_8873#5      GGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGA--AC--AACAA-CCGG 256
consensus_8873#3      GGACGGTTTTCCGCGCCTGGCTCGATTGAAGTGTCTTCTTCTGA--AC--AACAA-CCGG 290
consensus_8873#4      GGACGGTTTTCCGCGCCTGGCCCGATTGAAGTGTCTTCTTCTGA--AC--AACAA-CCGG 146
consensus_8873#2      GGACGGTTTTCCGCCCCTGGCCCGATTGAAGTTTCTTCTTCTGA--AC--AACAA-CCGG 327
consensus_8873#6      AAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCATCGCCGGAGAAGCAGGCCGTCCAG 317
consensus_8873#1      ATCGAGCTGTGGCACACTAAATTTCTGGTTTCGCCTTTTCCCGAACCGATCGACGAAGGG 326
                               *      *        * *      * *   * **               *

consensus_8873#0      AT-TGTGAGAA---TTGGTGAA---AACCTTCACGAATC-CCTTCCCAACCTT-CAGAGT 368
consensus_8873#7      ATCTGTGAGAAC--TTGGTCGN---AANAACCTTCNAGC-GAGATCCCGTTGC-GCCAGA 395
consensus_8873#5      AT-TGTGAGAA---TTGGT------GAAAACCTTCACGA-ATCCCTTCCCAAC-TTCAGA 304
consensus_8873#3      AT-TGTGAGAA---TTGGT------GAAAACCTTCACGA-ATCCCTTCCCAACCTTCAGA 339
consensus_8873#4      AT-TGTGAGAA---TTGGT------GAAAACCTTCACGA-ATCCCTTCCCAACCTTCAGA 195
consensus_8873#2      AT-TGTGAGAA---TTGGT------GAAAACCTTCACGA-ATCCCTTCCCAACCTTCAGA 376
consensus_8873#6      AA-TGCGAGCCCGGCCGACATT---CAGAAGATTAAGGAAGCCATCAAGCGAGCGACGAA 373
consensus_8873#1      ATGCTCCAGCATGCACAGTTCATAGAAGAAAATGCCCAGCGCCCATACATCGCTTTTATA 386
                      *      **                 *                                 

consensus_8873#0      AT--CATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGC 426
consensus_8873#7      GC--CGTTACAGGAGGTATCACTGTCT--GACCGGGGNNAGACAGAGCAGTCCAGGGAGC 451
consensus_8873#5      GTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGC 364
consensus_8873#3      GTATCATTCTGACCGGCAACAACATTCAGGAGCTCGGTGACTTGGAACCTCTGACGAAGC 399
consensus_8873#4      GTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGC 255
consensus_8873#2      GTATCATTCTGACCGGCAACAACATCCAGGAGCTCGGTGATTTGGAACCTCTGACGAAGC 436
consensus_8873#6      TCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAGTCGGGTCAAATTACCGGCGACAT 433
consensus_8873#1      GTCGTAATCCTTGCCTCGGGCAACCTCGGGGGCCATGTACAGCGGTGTC-CCAACGATAG 445
                                                          *                  *    

consensus_8873#0      TGCCGA--ACCTTGA-GACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACT 483
consensus_8873#7      CTCGGGTGATTCTGG-AAC----------------------------------------- 469
consensus_8873#5      TGCCGA--ACCTTGA-GACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACACC 421
consensus_8873#3      TGCCGA--ACCTCGA-GACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACAC- 455
consensus_8873#4      TGCCGA--ACCTTGA-GACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAACAC- 311
consensus_8873#2      TGCCGA--ACCTTGA-GACGCTCAGCTTGCTGACGAATCCCGTATCCACCAAGCAAAAC- 492
consensus_8873#6      ACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCTCCGATTCGAACAGATACAATA 493
consensus_8873#1      TCCGGTTCAAATCGTCTTCGTGCATAATCTTTGAGATACCAAAGTCGGCCAATTTCAATC 505
                                                                                  

consensus_8873#0      ACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGGCTGCTAGATTTCCGCAAGATCC 543
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      TACCGTGAGTATGTTGCTTTCCGTTTCCCCAAACTACGNGCTGCTAGATTANCCGCCAAG 481
consensus_8873#3      TACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGG-CTGCTAGATTTCC--GCAAG 512
consensus_8873#4      TACCGTGAGTATGTTGCTTTCCGTTTCCCCAACCTACGG-CTGCTAGATTTCC--GCAAG 368
consensus_8873#2      TACCGTGAGTTTGTTGCTTTCCGTTTCCCCAA-CTACGG-CTGCTAGATTTCC--GCAAG 548
consensus_8873#6      CACGATACAGCTGGT-CGAGAAGGGCGTGAAATACACTGAACAAAAGATTGAATTANAAC 552
consensus_8873#1      GGTTATCGATACAAATCAGTACGTTGGCTGGCTTCAGGTCACGATGAATAACATTTCGCT 565
                                                                                  

consensus_8873#0      GGCAAAAGGAGCGCGAAGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAGAAATGC 603
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      ATCCGGCAAAAAGGAGCGCGACAGCAGACGAACCTACTGTCAAGTCGAAGAAGGGCANAG 541
consensus_8873#3      ATCCGGCAAAA-GGAGCGCGA-AGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAG 570
consensus_8873#4      ATCCGGCAAAA-GGAGCGCGA-AGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAG 426
consensus_8873#2      ATCCGGCAAAA-GGAGCGCGA-AGCAGCGAACCTACTGTTCAAGTCGAAGAAGGGCAAAG 606
consensus_8873#6      AAACNNAGAGCAGCAG-ACGAGAACAACACANCAACN----------------------- 588
consensus_8873#1      GGTGCAAATACACGAGACCGTCAGCAATGTCTCCAAATTT--GGCCATTACAGCGTGCTG 623
                                                                                  

consensus_8873#0      ACAAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGTGAATCAT 663
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      AAATGCACCAAAGAAATCGTACGGAAAGCGAAACAAGCGTGCCGGCCGGTGCACATCGGT 601
consensus_8873#3      AAATGCAC-AAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGT 629
consensus_8873#4      AAATGCAC-AAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGT 485
consensus_8873#2      AAATGCAC-AAAGAAATCGTTCGGAAAGCGAAACAAGCGTTGCCGGCCGGTGCACTCGGT 665
consensus_8873#6      ------------------------------------------------------------
consensus_8873#1      ATTCAGAAAGGCGCCTTCGCGCCAAGCGTCGCTCGAGAAACGTTGCCAAATTGCCTCGTT 683
                                                                                  

consensus_8873#0      CGCCGGAGAAGCANGGCGTCCAGAATGCGAGCCCNGGCGGACATTCAGAAGATTAAGGAA 723
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      GAAATCATCGCGG----------------------------------------------- 614
consensus_8873#3      GAATCATCGCCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGGCGACATTCAGAAGAT 689
consensus_8873#4      GAA-TCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGAT 544
consensus_8873#2      GAA-TCATCGCCGGAGAAGCAGGCCGTCCAGAATGCGAGCCCGGCCGACATTCAGAAGAT 724
consensus_8873#6      ------------------------------------------------------------
consensus_8873#1      CTGCATACTCCAGGACGATGTTCCAACTGGTGGTTGTTTGATAGTAGCCCCGATACTGTA 743
                                                                                  

consensus_8873#0      GCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCATGCTACAG-TC 782
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      ------------------------------------------------------------
consensus_8873#3      TAAGGGAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCAT-GC 748
consensus_8873#4      TAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCAT-GC 603
consensus_8873#2      TAAGGAAGCCATCAAGCGAGCGACGAATCTGCACGAAGTCGAACGGCTTAATCGCAT-GC 783
consensus_8873#6      ------------------------------------------------------------
consensus_8873#1      TGATTCGTGGATGGCAAAGTTGAGAAAGAATTGTGTGCTCTTTCAGTACCGCCGTGTAGG 803
                                                                                  

consensus_8873#0      GGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGTAAAAGCT 842
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      ------------------------------------------------------------
consensus_8873#3      TACAGTCGGGTCAAATTACCGGCGACATACTGAACGGTAACGAATCGCATTCCATTAATT 808
consensus_8873#4      TACAGTCGGGTCAAATTACCGGCGACATACTGAACGGTA--------------------- 642
consensus_8873#2      TACAGTCGGGTCAAATTACCGGCGACATACTGAACGGCGCTAACGGTTCTGAAGCCGAGT 843
consensus_8873#6      ------------------------------------------------------------
consensus_8873#1      CATAATCCGGACTATTGAATGGAATGCTTTTGATCACGATGAGTTGGTCATTGTATCGAT 863
                                                                                  

consensus_8873#0      CCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAATACACTGA 902
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      ------------------------------------------------------------
consensus_8873#3      ATT--------------------------------------------------------- 811
consensus_8873#4      ------------------------------------------------------------
consensus_8873#2      AAAAGCTCCGATTCGAACAGATACAATACACGATACAGCTGGTCGAGAAGGGCGTGAAAT 903
consensus_8873#6      ------------------------------------------------------------
consensus_8873#1      ATAAACCTACGGAACTTCCGAAACAACCTTGCAAGAACTACGCATAAATTTAAGGCTGAA 923
                                                                                  

consensus_8873#0      ACAAAAGATTGAATTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGC 962
consensus_8873#7      ------------------------------------------------------------
consensus_8873#5      ------------------------------------------------------------
consensus_8873#3      ------------------------------------------------------------
consensus_8873#4      ------------------------------------------------------------
consensus_8873#2      ACACTGAACAAATAAACCAAAA-------------------------------------- 925
consensus_8873#6      ------------------------------------------------------------
consensus_8873#1      TTATTGAATTGATCCATGGTTCTG------------------------------------ 947
                                                                                  

consensus_8873#0      CCGGGC 968
consensus_8873#7      ------
consensus_8873#5      ------
consensus_8873#3      ------
consensus_8873#4      ------
consensus_8873#2      ------
consensus_8873#6      ------
consensus_8873#1      ------
                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)