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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8878#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1080 fasta sequence
[TCTCAGTGGTTAGTTGCATCGAATTTAGTGGACCGTAACATTTCAGTTGCAAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAACTCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAA-GGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC-GGAAG-AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA-AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC-GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC-GGAC-GTCCTGACCGG-CGGCAGCACACTGGCGACGGTGGCCATCGA-CGGGG-CGAAGGTT-GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA-C-C--GCAATCAGGGCTGCGATATGCTGATCTACC-CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCACTGGAGAAGTAG-GCCGTGAATGCCATTTT-TAAAAAAAAAACG-TGTTGAAAATATACAGACAT]
[+] EMBL CNS08UP1 [TCTCAGTGGTTAGTTGCATCGAATTTAGTGGACCGTAACATTTCAGTTGCAAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAACTCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTCGCGGACAAGGGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGGAAGCAGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCACACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C C GCAATCAGGGCTGCGATATGCTGATCTACC CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATAT ]
[+] EMBL AL694520 [ ccgaggttAATTTAGTGGACCGCAACATTTCAGTTGCAAAGAATCCCGAAGTGTCTAGCAAAGCGAACCACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCTCCGTGGCGGACAA GGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAACAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGG AAAATGTCGTACGGACAGCAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGA GTACCG AAAATCCATCTGTTCGACATCAACATTCCGGGCGGGATTACGTTCCGCGAGTCTGGACGGTCCTGACCGGCCGGCAGCACACTGGCGACGGTGGCCATCGACCGGGGCCGAAGGTTGGGCCTNGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C CTGGAAATCAG ]
[+] EMBL CNS08TH8 [ CGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAACTCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTCGCGGACAA GGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCACACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C C GCAATCAGGGCTGCGATATGCTGATCTACC CGGG ]
[+] EMBL BX623667 [ TTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAA GGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGTCGTACGGACAGCAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGCGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCACACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C C GCAATCAGGGCTGCGATATGTTGATCTACC CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAG ]
[+] EMBL BX604788 [ CTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAA GGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGG ]
[-] EMBL CNS08UP2 [ CGGACAA GGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCCACCTGGCGGAAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCAAACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCTTCTGCTACGACATGCGGTTCGACGGGCTGGCAAGGCTGTAGCGC GCAATCAGGGCTGCGATATGCTGATCTACCTCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCACTGGAGAAGTAGTGCCGTGAATGCCATTTTGTAAAAAAAAAACGTTGTTGAAAATATACAGACAT]
[-] EMBL CNS08TH9 [ CC CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCATTCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCACTGGAGAAGAAG GCCCGGAATGCCATTTT TAAAAAAAAAACG TGTTGAGAATA ]
consensusID : consensus_8878#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 762 fasta sequence
[GAATNGCCCGAGGATTCAGTTGAAAATAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCTGCACTGCGTAAATGAACAGGATGTGCACGCTGCCGGTTTCCTGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCTGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACTGCTCCTGCCGTGGCTGGACGAAGGGTGCTCGCGTGGTAGCTGCTGGCCGAATGTTTCAACTCCCCGTACGGTACTGCAACACTTTCCTGGCTGTACTGCGGAAGGAGATACCGTCCGGTGAGACTGAGCCGNAGCCTGGCGGCAATCGCCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACCGATTCCCGTGTAGAAAATGCCTGTACAGTGACATGCAAGCTGTACAACACCCTGTACGGTATGGTCGCCGGAAGTGGGTCCCTGACTTGGGCTGACGTACCGNNAAAATCCCATACTGTTTGACATTCAACCATTTACCCGTGGGGCAGGGGAATTTACCGTTTCCCGCAGGAANGTTCTGNGAACCGTTACCTTGNAACCCAGCGCGNGCATGCAACAACTTTGGGGCGCACCGGGTNGTGCCCCCAATCNGAANCGNCGGCGAAACAGGTNGGAGACCTCTTGTGGCATCATTGGCNTAACACGAACNATTGGCCGGTATCGCAA]
[+] EMBL AL931183 [GAATNGCCCGAGGATTCAGTTGAAAATAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCTGCACTGCGTAAATGAACAGGATGTGCACGCTGCCGGTTTCCTGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCTGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACTGCTCCTGCCGTGGCTGGACGAAGGGTGCTCGCGTGGTAGCTGCTGGCCGAATGTTTCAACTCCCCGTACGGTACTGCAACACTTTCCTGGCTGTACTGCGGAAGGAGATACCGTCCGGTGAGACTGAGCCGNAGCCTGGCGGCAATCGCCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACCGATTCCCGTGTAGAAAATGCCTGTACAGTGACATGCAAGCTGTACAACACCCTGTACGGTATGGTCGCCGGAAGTGGGTCCCTGACTTGGGCTGACGTACCGNNAAAATCCCATACTGTTTGACATTCAACCATTTACCCGTGGGGCAGGGGAATTTACCGTTTCCCGCAGGAANGTTCTGNGAACCGTTACCTTGNAACCCAGCGCGNGCATGCAACAACTTTGGGGCGCACCGGGTNGTGCCCCCAATCNGAANCGNCGGCGAAACAGGTNGGAGACCTCTTGTGGCATCATTGGCNTAACACGAACNATTGGCCGGTATCGCAA]
consensusID : consensus_8878#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 755 fasta sequence
[AGAATCGCCCGAGNTAACATTTCAGTTGCAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGNGGTACGATTTCCGGAANAANTGCCGTACGGACAGTAAGGCTGTACAACACCGTTGTACCTGTGTGGTCGCCGGNAGGGGTCCCTGCTGGCGGACGGCTACCGGCGATAAACTCCGATCTGTCGACCATTCAGACATTCCGGAGGTGGGGATTACCGTACCCCGGCGAAGGTCGGGACGGTTCCGAACCGCCGGCAGTAAACTTGGCGAAAGNGNGTGGGCCATCGANCTGGGGGCGCAAGGTTGGCCTTGGGCATNCTGGCTAAAGGANAAATNCNNGGTTTGACGAAGCGCTGGGCCNAGGCGNTACCGGACACTAGGCTGCGAAAATNCNGNTCAC]
[+] EMBL AL934754 [AGAATCGCCCGAGNTAACATTTCAGTTGCAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGNGGTACGATTTCCGGAANAANTGCCGTACGGACAGTAAGGCTGTACAACACCGTTGTACCTGTGTGGTCGCCGGNAGGGGTCCCTGCTGGCGGACGGCTACCGGCGATAAACTCCGATCTGTCGACCATTCAGACATTCCGGAGGTGGGGATTACCGTACCCCGGCGAAGGTCGGGACGGTTCCGAACCGCCGGCAGTAAACTTGGCGAAAGNGNGTGGGCCATCGANCTGGGGGCGCAAGGTTGGCCTTGGGCATNCTGGCTAAAGGANAAATNCNNGGTTTGACGAAGCGCTGGGCCNAGGCGNTACCGGACACTAGGCTGCGAAAATNCNGNTCAC]
consensusID : consensus_8878#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence
[ACGCTTCCCTTGTTTGCTGCCCTATTTTTACAGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACCGGCGGCAGTACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGCTACGACATGCGGTTTGACGAGCTGGCCAGGCTGTACCGCAATCAGGGCTGCGATATGCTGATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCGAACGATACGCAATCGTACGTGGCGACCATTTCGCCGGCACGCGACCCAGCCGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCATC]
[+] EMBL BX605229 [ACGCTTCCCTTGTTTGCTGCCCTATTTTTACAGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACCGGCGGCAGTACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGCTACGACATGCGGTTTGACGAGCTGGCCAGGCTGTACCGCAATCAGGGCTGCGATATGCTGATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCGAACGATACGCAATCGTACGTGGCGACCATTTCGCCGGCACGCGACCCAGCCGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCATC]
consensusID : consensus_8878#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 610 fasta sequence
[GCCAGCAGATCCCGAGGTTTTGTTGAAATAATCCGAANTGTTAGCAAGCGAAACATTAACTGTACATTTCTTCTCTTTCTCTGTGCTCAACCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGACAAAATCGAGCGCTGGCAAAATACGCTCCGCGTGGGGNCAAGGTGTCGGTGGTAGCGCTGCCGAATGTTCAAATCCCCGTACGGTACGCAACACTTTCCGGGGTACGCGGAAAGAGGATACCGTCCGGTTGAGGACGAAGCCCGAAGACCTTGGGNGGNCACACTCGCGACACAGAGCTCGGAATCTTATCNTGATTACGGGGNGTACGAATTCCCGGTGAAAAANTTGCCCGTCACGGCAACACGCACACGACTGTACAAANAACNTGGTAAGGATNATTGGNTCGGACCGAAGGGNTCCCCTGCTNGGAGAACCGTACCANGAAAAAACACAATCCTTGTTNTGAAAATTCCAACAATTTCCCGAGGGCCGGGACATATACCAGTNCACGGACATGTC]
[+] EMBL AL696026 [GCCAGCAGATCCCGAGGTTTTGTTGAAATAATCCGAANTGTTAGCAAGCGAAACATTAACTGTACATTTCTTCTCTTTCTCTGTGCTCAACCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGACAAAATCGAGCGCTGGCAAAATACGCTCCGCGTGGGGNCAAGGTGTCGGTGGTAGCGCTGCCGAATGTTCAAATCCCCGTACGGTACGCAACACTTTCCGGGGTACGCGGAAAGAGGATACCGTCCGGTTGAGGACGAAGCCCGAAGACCTTGGGNGGNCACACTCGCGACACAGAGCTCGGAATCTTATCNTGATTACGGGGNGTACGAATTCCCGGTGAAAAANTTGCCCGTCACGGCAACACGCACACGACTGTACAAANAACNTGGTAAGGATNATTGGNTCGGACCGAAGGGNTCCCCTGCTNGGAGAACCGTACCANGAAAAAACACAATCCTTGTTNTGAAAATTCCAACAATTTCCCGAGGGCCGGGACATATACCAGTNCACGGACATGTC]
consensusID : consensus_8878#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 508 fasta sequence
[CCAGGCTTTNAATCCGAAGTGTTAGCAAAGCGAACACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAACCCTGATNCGGAAAGTTTGTGCAATTCATCCCAACTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGNTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACGAGCCGCAGCCTGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGTCGTACGGACAGCCAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAAC]
[+] EMBL AL930966 [CCAGGCTTTNAATCCGAAGTGTTAGCAAAGCGAACACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAACCCTGATNCGGAAAGTTTGTGCAATTCATCCCAACTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGNTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACGAGCCGCAGCCTGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGTCGTACGGACAGCCAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8878#1 ----------------------GAATNGCCCGAGGA-----TTCAGTTGAAAATAATCCC 33
consensus_8878#4 ------------------GCCAGCAGATCCCGAGGT-----TTT-GTTGAAA-TAATCC- 34
consensus_8878#5 ------------------------------CCAGGC-----TTT---------NAATCC- 15
consensus_8878#2 ---------------------AGAATCGCCCGAGNTAACATTTCAGTTGCAA-GAATCCC 38
consensus_8878#0 TCTCAGTGGTTAGTTGCATCGAATTTAGTGGACCGTAACATTTCAGTTGCAAAGAATCCC 60
consensus_8878#3 ------------------------------------------------------------
consensus_8878#1 GAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAAC 93
consensus_8878#4 GAANTGT-TAGCAA-GCGAAACATTAACTGTAC-ATTTCTTCTCTTTCTCTGTGCTCAAC 91
consensus_8878#5 GAAGTGT-TAGCAAAGCGAA-CACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAAC 73
consensus_8878#2 GAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAAC 98
consensus_8878#0 GAAGTGTCTAGCAAAGCGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAAC 120
consensus_8878#3 ------------------------------------------------------------
consensus_8878#1 CCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCTGCACTGCGTAAATGAACA 153
consensus_8878#4 C-TGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGC-GCACTGCGTAAATGAACA 149
consensus_8878#5 CCTGATNCGGAAAGTTTGTGCAATTCATCCCAAC-TTCAGC-GCACTACGTAAATGAACA 131
consensus_8878#2 CCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGC-GCACTGCGTAAATGAACA 157
consensus_8878#0 TCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAG 180
consensus_8878#3 -------------------------------------ACGCTTCCCTTGTTTGCTGCCCT 23
**
consensus_8878#1 GGATGTGCACGCTGCCGGTTTCCTGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCTGAC 213
consensus_8878#4 GGATG-GCACGC-GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 205
consensus_8878#5 GGATG-GCACGC-GCCGGTTTCC-GAATTGNTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 187
consensus_8878#2 GGATG-GCACGC-GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 213
consensus_8878#0 GATGG--CACGC-GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 235
consensus_8878#3 ATTTT--TACA--GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 77
** ********** ****** ************************* ***
consensus_8878#1 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACTGCTCCTGCCGTGGCTGGACGAA 273
consensus_8878#4 AAGG-ACAAA--ATCGA----GCGCTGGC-AAAATAC-GCTCC--GCGTGG--GGNCAAG 252
consensus_8878#5 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 244
consensus_8878#2 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 270
consensus_8878#0 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 292
consensus_8878#3 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 134
**** ***** ***** ******** ******* ***** ***** ** * *
consensus_8878#1 GGGTGCTCGCGTGGTAGCTGCTGGCCGAATGTTTCAACTCCCCGTACGGTACTGCAACAC 333
consensus_8878#4 GTG---TCG-GTGGTAGC-GCTG-CCGAATGTT-CAAATCCCCGTACGGTAC-GCAACAC 304
consensus_8878#5 G-GTGCTCGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 301
consensus_8878#2 G-GTGCTCGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 327
consensus_8878#0 G-GTGCACGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 349
consensus_8878#3 G-GTGCTCGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 191
* * ** ******** **** ********* *** ************** *******
consensus_8878#1 TTTCCTGGCTGTACTGCGGAAGGAGATACCGTCCGGT--GAGACTGAGCC-GNAGCC--- 387
consensus_8878#4 TTTCCGGG--GTACGCGGAAAGAGGATACCGTCCGGTTGAGGACGAAGCCCGAAGACCTT 362
consensus_8878#5 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-GAGCC-GCAGCC--- 350
consensus_8878#2 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-AAGCC-GCAGCC--- 376
consensus_8878#0 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-GAGCC-GCAGCC--- 398
consensus_8878#3 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-AAGCC-GCAGCC--- 240
***** * **** * * ************* *** **** * ** *
consensus_8878#1 ---TGGCGGCAATCGCCGAA-AGAGCTCGGCATCTA--TCTGATC---GGCGGTACCGAT 438
consensus_8878#4 GGGNGGNCACACTCGCGACACAGAGCTCGGAATCTTATCNTGATTACGGGGNGTACGAAT 422
consensus_8878#5 ----TGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGCGGTAC-GAT 398
consensus_8878#2 ---TGGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGNGGTACGATT 426
consensus_8878#0 ---TGGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGCGGTAC-GAT 447
consensus_8878#3 ---TGGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGCGGTAC-GAT 289
* ** **** * ******** **** **** ** **** *
consensus_8878#1 TCCCG-TGTAGAAAATGCCTGT-ACAGTGACATGCA---AGCTGTACAA-CACCCTGTAC 492
consensus_8878#4 TCCCGGTGAAAAANTTGCCCGTCACGGCAACACGCACACGACTGTACAAANAACNTGGTA 482
consensus_8878#5 TCCGG-----AAAAATGTC-GT-ACGG--ACAGCCA---AGCTGTACAA--CACCTGTAC 444
consensus_8878#2 TCCGG----AANAANTGCC-GT-ACGG--ACAGTAA---GGCTGTACAACACCGTTGTAC 475
consensus_8878#0 TCCGG-----AAAAATGCC-GT-ACGG--ACAGTAA----GCTGTACAA--CACCTGTAC 492
consensus_8878#3 TCCGG-----AAAAATGCC-GT-ACGG--ACAGTAA----GCTGTACAA--CACCTGTAC 334
*** * * ** * ** ** * *** * ******** **
consensus_8878#1 G-GTATGGTCG--CCGGA---AGTGGGTCCCTGACTTGGGCTGACGTACC--GNNAAAAT 544
consensus_8878#4 A-GGATNATTGGNTCGGACCGAAGGGNTCCCCTGCTNGGAGAACCGTACCANGAAAAAAC 541
consensus_8878#5 C-GTGTGGTCG--CCGGA-----AGGGTCCCT-GCTGG---CGACGTACC--GCAAAATC 490
consensus_8878#2 CTGTGTGGTCG--CCGGN----AGGGGTCCCT-GCTGGCGGACGGCTACCGGCGATAAAC 528
consensus_8878#0 C-GTGTGGTCG--CCGGA-----AGGGTCCCT-GCTGG---CGACGTACC--GCAAAATC 538
consensus_8878#3 C-GTGTGGTCG--CCGGA-----AGGGTCCCT-GCTGG---CGACGTACC--GCAAAATC 380
* * * * *** ** **** ** * **** **
consensus_8878#1 CCCATACTGTTTG---ACATTCAA------CCATTTACCCGTGGGGCAGGGGAATTTACC 595
consensus_8878#4 ACAATCCTTGTTNTGAAAATTCCA------ACAATTTCCCG-AGGGCCGGGACATATACC 594
consensus_8878#5 CATCTGTTCGACATCAAC------------------------------------------ 508
consensus_8878#2 TCCGATCTGTCGAC---CATTCAG------ACATTCCGGAGGTGGGGATTACCGTACCCC 579
consensus_8878#0 CATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACC 598
consensus_8878#3 CATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACC 440
*
consensus_8878#1 GTTTCCCGCAGGAANGTTCTGNGAACCGTTACCTTGNAACCCAGCGCGNGCATG-----C 650
consensus_8878#4 AGTNCACG--GACATGTC------------------------------------------ 610
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 GGCGAAGGTCGGGACGGTTC-CGAACCGCCGGCAGTAAACTTGGCGAAAGNGNGTGGGCC 638
consensus_8878#0 GGCGGCAGCACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGC 658
consensus_8878#3 GGCGGCAGTACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGC 500
consensus_8878#1 AACAACTTTGGGGCGCACCGGGTNGTGCCCCCAATCNG-AANCGNCGGCGAAACAGGTNG 709
consensus_8878#4 ------------------------------------------------------------
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 ATCGANCTGGGGGCGCAAGGTTGGCCTTGGGCATNCTG-GCTAAAGGANAAATNCNNGGT 697
consensus_8878#0 TACGACATGCGGTTCGACGAGCTGGCAAGGCTGTACCGCAATCAGGGCTGCGATATGCTG 718
consensus_8878#3 TACGACATGCGGTTTGACGAGCTGGCCAGGCTGTACCGCAATCAGGGCTGCGATATGCTG 560
consensus_8878#1 GAGACCTCTTGTGGCATCATTGGCNTAACACGAACNATTGGCCGGTATCGCAA------- 762
consensus_8878#4 ------------------------------------------------------------
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 TTGACGAAGCGCTGGGCCNAGGCGNTACCGGACACTAGGCTGCGAAAATNCNGNTCAC-- 755
consensus_8878#0 ATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGG 778
consensus_8878#3 ATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGG 620
consensus_8878#1 ------------------------------------------------------------
consensus_8878#4 ------------------------------------------------------------
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 ------------------------------------------------------------
consensus_8878#0 GGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCG 838
consensus_8878#3 GGCCGTGCGAACGATACGCAATCGTACGTGGCGACCATTTCGCCGGCACGCGACCCAGCC 680
consensus_8878#1 ------------------------------------------------------------
consensus_8878#4 ------------------------------------------------------------
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 ------------------------------------------------------------
consensus_8878#0 GCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCC 898
consensus_8878#3 GCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCATC--- 737
consensus_8878#1 ------------------------------------------------------------
consensus_8878#4 ------------------------------------------------------------
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 ------------------------------------------------------------
consensus_8878#0 GAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAA 958
consensus_8878#3 ------------------------------------------------------------
consensus_8878#1 ------------------------------------------------------------
consensus_8878#4 ------------------------------------------------------------
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 ------------------------------------------------------------
consensus_8878#0 GTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCA 1018
consensus_8878#3 ------------------------------------------------------------
consensus_8878#1 ------------------------------------------------------------
consensus_8878#4 ------------------------------------------------------------
consensus_8878#5 ------------------------------------------------------------
consensus_8878#2 ------------------------------------------------------------
consensus_8878#0 CTGGAGAAGTAGGCCGTGAATGCCATTTTTAAAAAAAAAACGTGTTGAAAATATACAGAC 1078
consensus_8878#3 ------------------------------------------------------------
consensus_8878#1 --
consensus_8878#4 --
consensus_8878#5 --
consensus_8878#2 --
consensus_8878#0 AT 1080
consensus_8878#3 --
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||