These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8911#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1368 fasta sequence [GGCAGAATCGCCCCCGAGGTTTNGCTCGCGCTCGAGTTTCTGCTAAGGTGTTCGTCACCTACAAGGCAGTGAAAAGGGCGTGCAATGCGCCTTTGGTGGCGTGCGATTGCTGCAAGAGCGGTCTCGACAACCGCCTGCCTGGAGTTTCTTGCCCTTGAACAAGCTGCAACTGAGGACTACCTCAATGACTGTGTGCTCGTCGAGAANGGATCTTNGCCTGACATCTTCAAGCCCTACACTAACAAATTGAAAATTCAAGTGACGCTAAGTCCCAAGTGCTAAATGGCTGNAAAGANCCGTAAGGTANACCTTGTGACTGCCAGGCTTGGCCTAAGGNTATAGACTCGCACTAACTATAAAACCTGAGTAGCACCCGAGAGGGTAAGCTAAGAANGTGTTAAAAACGGGGACACGTTANCTTCTAATTCACGGNCGCCAGAGAACCGATCGGGACGAATGCGGCGACATCAANGTTGAGTTCCACGGTAAACGGGAACANAACAAAGATTCCGGTTAGAAGCGAAATTTNTGCTCCAGCCGGTGAGAAAAGGGAAGCCCTAACTTAGGCGCNAATCAACGTCGCCTTTCTATAGGACGTTNCATAGAGAGGNGCTTTTACCAGATTTACCACAAANATTAGTTTAGTTGGACGGGGAGACTTAGCCCACCAGTAATAGACAGCCCGGGTCGCATTTACAACCACACTCTTGGGGCTTACCCAGGGGGCACAGATTAGAAAAGGGGCACCCGCCGCGGCGTAAACAAACGCTTTTGGGCGGTCTCGAAACTTAAATGGCCCCGCAAAAGCAACTGGNGGCCGAAACCAAACAGCCAATCGCGGTCAACAGAGGACCAGGGGTCACACAGACAAGCCTTTTTATGGGNNGGAGAGCTTTTNAAACCCCTTAAGACACCTGAGGCTCAGGGGCNCGAAAATGGCGCACCCCGCAAAAGGGCGATGGGGTGGTGACCCGAAAGACAAGACCCANGGGNTGGNAANCCAAAGGATCAGGCGCCTGAAAGTTTTAACCCTNTTGNGNGGACNAACCGNGGCGTAGCACCCGATAAAGAGCACCGGCCCCCGGNTTTTTTAAAAAAGCGCCAAAAAAAGANCCCATGGGTAAGANTACCCCNCCGCNGTAAGAAGTAGACGCCGANGTTATCTGGGGCANCGATTTTCAGACTTTCATCCCCCGTAGGTGCGTAGCAAAACCGCAACGACGCTGGNTAGCANCACCACAGGGGGACCGACTTTTTAGTNGGTACCGCGGAAAATGGCCGCTATCCCCTAAAAATGCACGTTNGCCCGCGATAAAGCACCAGCTGTGTGGNTGGTGGGGGACAAATAGCCTGCCCCCCAGTGGGAGT] [+] EMBL AL934792 [GGCAGAATCGCCCCCGAGGTTTNGCTCGCGCTCGAGTTTCTGCTAAGGTGTTCGTCACCTACAAGGCAGTGAAAAGGGCGTGCAATGCGCCTTTGGTGGCGTGCGATTGCTGCAAGAGCGGTCTCGACAACCGCCTGCCTGGAGTTTCTTGCCCTTGAACAAGCTGCAACTGAGGACTACCTCAATGACTGTGTGCTCGTCGAGAANGGATCTTNGCCTGACATCTTCAAGCCCTACACTAACAAATTGAAAATTCAAGTGACGCTAAGTCCCAAGTGCTAAATGGCTGNAAAGANCCGTAAGGTANACCTTGTGACTGCCAGGCTTGGCCTAAGGNTATAGACTCGCACTAACTATAAAACCTGAGTAGCACCCGAGAGGGTAAGCTAAGAANGTGTTAAAAACGGGGACACGTTANCTTCTAATTCACGGNCGCCAGAGAACCGATCGGGACGAATGCGGCGACATCAANGTTGAGTTCCACGGTAAACGGGAACANAACAAAGATTCCGGTTAGAAGCGAAATTTNTGCTCCAGCCGGTGAGAAAAGGGAAGCCCTAACTTAGGCGCNAATCAACGTCGCCTTTCTATAGGACGTTNCATAGAGAGGNGCTTTTACCAGATTTACCACAAANATTAGTTTAGTTGGACGGGGAGACTTAGCCCACCAGTAATAGACAGCCCGGGTCGCATTTACAACCACACTCTTGGGGCTTACCCAGGGGGCACAGATTAGAAAAGGGGCACCCGCCGCGGCGTAAACAAACGCTTTTGGGCGGTCTCGAAACTTAAATGGCCCCGCAAAAGCAACTGGNGGCCGAAACCAAACAGCCAATCGCGGTCAACAGAGGACCAGGGGTCACACAGACAAGCCTTTTTATGGGNNGGAGAGCTTTTNAAACCCCTTAAGACACCTGAGGCTCAGGGGCNCGAAAATGGCGCACCCCGCAAAAGGGCGATGGGGTGGTGACCCGAAAGACAAGACCCANGGGNTGGNAANCCAAAGGATCAGGCGCCTGAAAGTTTTAACCCTNTTGNGNGGACNAACCGNGGCGTAGCACCCGATAAAGAGCACCGGCCCCCGGNTTTTTTAAAAAAGCGCCAAAAAAAGANCCCATGGGTAAGANTACCCCNCCGCNGTAAGAAGTAGACGCCGANGTTATCTGGGGCANCGATTTTCAGACTTTCATCCCCCGTAGGTGCGTAGCAAAACCGCAACGACGCTGGNTAGCANCACCACAGGGGGACCGACTTTTTAGTNGGTACCGCGGAAAATGGCCGCTATCCCCTAAAAATGCACGTTNGCCCGCGATAAAGCACCAGCTGTGTGGNTGGTGGGGGACAAATAGCCTGCCCCCCAGTGGGAGT] consensusID : consensus_8911#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 918 fasta sequence [AGTGAACACACATTTTGTGTATCATAAAAATTAACTTTTAAGCCCTTATAATGGGACGCGTTATTCGCGCGCAGCGTAAAGGTGCCGGATCAGTGTTCCGGGCACACACCAAGAAGCGAAAGGGACAGCCCAAGCTGCGCCATCTCGACTATGCCGAACGTCACGGTTACCTGAAGGGTGTCGTCAAGCAAATCATCCAGGACCCAGGCCGTGGTGCCCCGCTGGCGGTCGTAAACTTCCGCGACCCCTACCGCTTCCGCCTGAGCAAGCAGCTGTTCATTGCCGCCGAAGGTATGTACACCGGCCAGTTCGTGTACTGCGGTCGTCGGGCCCAGCTGCAGATCGGTAACGTGATCCCGATCGGTCTGATGCCGGAAGGTACGATTGTGTGCAACCTGGAGGAGAAGACCGGTGACCGTGGCAAGCTGGCGCGTACGTCCGGCAACTACGCCTCGGTCATTGCGCACAACCCGGACACGAAGCGCACCCGCGTGAAGCTGCCGTCCGGTGCGAAGAAGGTGCTGCCGTCGGCTAACCGTGCGATGGTCGGTATCGTGGCCGGTGGCGGTCGTATCGACAAGCCCATCCTGAAGGCCGGTCGTGCGTACCACAAGTACAAGGTGAAGCGTAACTGCTGGCCGAAGGTGCGTGGTGTGGCGATGAACCCCGTCGAGCATCCGCACGGTGGTGGTAACCATCAGCACATCGGTAAGGCGTCGACGGTCAAGCGTGGAACGCCTCCGGGTCGCAAGGTCGGTCTCATCGCTGCCCGTCGTACCGGTCGTATCCGTGGTGGCAAGGGCGACGAGAAGTTCAAGGAGAAGGAGAAGAAGTAAGCGGAGTAGTGAGTGCTCTGTTTATGTTCTGGTCCCTGTTCTGCGCGTTTTGGGGTGTTAGCGAGCTGAAGTGGTCCTATCG] [+] EMBL AF164152 [AGTGAACACACATTTTGTGTATCATAAAAATTAACTTTTAAGCCCTTATAATGGGACGCGTTATTCGCGCGCAGCGTAAAGGTGCCGGATCAGTGTTCCGGGCACACACCAAGAAGCGAAAGGGACAGCCCAAGCTGCGCCATCTCGACTATGCCGAACGTCACGGTTACCTGAAGGGTGTCGTCAAGCAAATCATCCAGGACCCAGGCCGTGGTGCCCCGCTGGCGGTCGTAAACTTCCGCGACCCCTACCGCTTCCGCCTGAGCAAGCAGCTGTTCATTGCCGCCGAAGGTATGTACACCGGCCAGTTCGTGTACTGCGGTCGTCGGGCCCAGCTGCAGATCGGTAACGTGATCCCGATCGGTCTGATGCCGGAAGGTACGATTGTGTGCAACCTGGAGGAGAAGACCGGTGACCGTGGCAAGCTGGCGCGTACGTCCGGCAACTACGCCTCGGTCATTGCGCACAACCCGGACACGAAGCGCACCCGCGTGAAGCTGCCGTCCGGTGCGAAGAAGGTGCTGCCGTCGGCTAACCGTGCGATGGTCGGTATCGTGGCCGGTGGCGGTCGTATCGACAAGCCCATCCTGAAGGCCGGTCGTGCGTACCACAAGTACAAGGTGAAGCGTAACTGCTGGCCGAAGGTGCGTGGTGTGGCGATGAACCCCGTCGAGCATCCGCACGGTGGTGGTAACCATCAGCACATCGGTAAGGCGTCGACGGTCAAGCGTGGAACGCCTCCGGGTCGCAAGGTCGGTCTCATCGCTGCCCGTCGTACCGGTCGTATCCGTGGTGGCAAGGGCGACGAGAAGTTCAAGGAGAAGGAGAAGAAGTAAGCGGAGTAGTGAGTGCTCTGTTTATGTTCTGGTCCCTGTTCTGCGCGTTTTGGGGTGTTAGCGAGCTGAAGTGGTCCTATCG] consensusID : consensus_8911#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 747 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG------GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC-AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTGGGGGGAGCATTTG] [+] EMBL BM590711 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAAGCTGTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGCGTAGAGGACACCCAACCCCAAAATTACTACCGTGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGCGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGGGTTTCGTGCTGAAGAAGGACGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGG ] [+] EMBL BM593877 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTG ] [+] EMBL BM578639 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCTAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGCAAATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAG ] [+] EMBL BM581829 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTA ] [+] EMBL BM616323 [ CCGCCCACGCGTCCGT GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACCAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGTAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGGGTTTCGTGCTGAAGAAGGACGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCATTACTGGGTCGAGAACGGT ] [+] EMBL BM580180 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGT ] [+] EMBL BM613250 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGCGTAGAGGACACCCAACCCCAAAATTACTACCGTGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGCGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGGGTTTCGTGCTGAAGAAGGACGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTACCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTGGGGGGAGCATTTG] [+] EMBL BM608541 [ CCGCCCACGCGTCCGT GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGA ] [+] EMBL BM583075 [ CCGCGGACGCGTGGG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGCGTAGAGGACACCCAACCCCAAAATTACTACCGTGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCA ] consensusID : consensus_8911#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence [CCGCTCCGGCTACTTTTCTAAACCGGGGTTTATGAAACCTTCTTTGCTCAAAGGATAGTTGTTGTCCCGTTTGCTTAGCGGCGATGACCTTCACTGCGTCTACCGCGCAGTTCTTCGGGAGGGGTTCGTAAAAGCAAAACCTAACCTATTAGTAGAGTACACTAGTTACGTTTCAGCAGTCGATGCGGTTGTGATGATTTAGTAAAAGAGAAGCAAAAGCGAACAGAGCAGTTGTGTTGTTGTTTGATTTAGGTTTATAATTTGTGTAAGAAGAAGAGAGAAAAAAAACACAGCAAACAAAATTGAGTCGTGATTAAGGATTGTTAAGGAAACAGAAAACGCTTGCGCTTTTCGAAGGGAATTGGTGGTTTTCAGCTGTCGAAATTAGGAGTCGAAAATAATTGCGCGGAGCTGATTCGCGTGTGCGATGATAGTATTGTTGATTATATTTGATTAAAAAAACAAGGGTTAAGCCAAAAAGCGTGCTTAGGATTGCAACAAACGTTTGCAATGTTGTTTTGAAGAAAGCAAAAAAAAGGTGACCCATTGAAACAGGTTAGTGAGTTTAGAACGAGGGAACGTTTTCGGTCCCCGCCCCACAAAAATGGGTCCGCATTGTATTAATTACCGCACCCCGCATTGGGTGGACATTTGCATTGCTCCAAACGGTTTGTTTGACCGGGTGCGCTTTTC] [+] EMBL BM622596 [CCGCTCCGGCTACTTTTCTAAACCGGGGTTTATGAAACCTTCTTTGCTCAAAGGATAGTTGTTGTCCCGTTTGCTTAGCGGCGATGACCTTCACTGCGTCTACCGCGCAGTTCTTCGGGAGGGGTTCGTAAAAGCAAAACCTAACCTATTAGTAGAGTACACTAGTTACGTTTCAGCAGTCGATGCGGTTGTGATGATTTAGTAAAAGAGAAGCAAAAGCGAACAGAGCAGTTGTGTTGTTGTTTGATTTAGGTTTATAATTTGTGTAAGAAGAAGAGAGAAAAAAAACACAGCAAACAAAATTGAGTCGTGATTAAGGATTGTTAAGGAAACAGAAAACGCTTGCGCTTTTCGAAGGGAATTGGTGGTTTTCAGCTGTCGAAATTAGGAGTCGAAAATAATTGCGCGGAGCTGATTCGCGTGTGCGATGATAGTATTGTTGATTATATTTGATTAAAAAAACAAGGGTTAAGCCAAAAAGCGTGCTTAGGATTGCAACAAACGTTTGCAATGTTGTTTTGAAGAAAGCAAAAAAAAGGTGACCCATTGAAACAGGTTAGTGAGTTTAGAACGAGGGAACGTTTTCGGTCCCCGCCCCACAAAAATGGGTCCGCATTGTATTAATTACCGCACCCCGCATTGGGTGGACATTTGCATTGCTCCAAACGGTTTGTTTGACCGGGTGCGCTTTTC] consensusID : consensus_8911#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCTTTGCTCTCGTGCTATGCGTCGGTCTGGCCGTAGGGGCCGAGGTTGATAGTGTACCGGAAGTGCCATCGGACCTGCAGCAGCAACTGGACGAGCTGCAGCTGGCCGATAAACCAGAAGCTCCTGTGGATGACGCCGAACAACCTCTTCCCCCAAGTGGCGATGAA] [+] EMBL BM625203 [CCGCCCACGCGTCCGCCCACGCGTCCGCTTTGCTCTCGTGCTATGCGTCGGTCTGGCCGTAGGGGCCGAGGTTGATAGTGTACCGGAAGTGCCATCGGACCTGCAGCAGCAACTGGACGAGCTGCAGCTGGCCGATAAACCAGAAGCTCCTGTGGATGACGCCGAACAACCTCTTCCCCCAAGTGGCGATGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8911#0 GGCAGAATCGCCCCCGA-GGTTTNG-CTCGCGCTCGAGTTTCTGCTAAGGTGTTCGTC-- 56 consensus_8911#4 -------CCGCCCACGC-GTCCGCC-CACGCGTCCGCTTTGCTCTCGTGCTATGCGTC-- 49 consensus_8911#2 -------CCGCCCACGC-GTCCGCC-CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG 51 consensus_8911#3 -------CCGCTCCGGCTACTTTTC-TAAACCGGGGTTTATGAAACCTTCTTTGCTCAAA 52 consensus_8911#1 --AGTGAACACACATTTTGTGTATCATAAAAATTAACTTTTAAGCCCTTATAATGGGACG 58 * * * consensus_8911#0 ----ACCTACAAGGCAGTGAAAAGGGCGTGCAATGCGCCTTTGGTGGC-GTGCGA----- 106 consensus_8911#4 ----GGTCTGGCCGTAGGGGCCGAGGTTGATAGTGTACCGGAAGTGCC-ATCGGA----- 99 consensus_8911#2 GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTT 111 consensus_8911#3 GGATAGTTGTTGTCCCGTTTGCTTAGCGGCGATGACCTTCACTGCGTCTACCGCG----- 107 consensus_8911#1 CGTTATTCGCGCGCAGCGTAAAGGTGCCGGATCAGTGTTCCGGGCACACACCAAGAAGCG 118 * consensus_8911#0 TTGCTGCAAGAGCGGTCTCGACAA---CCGCCTGCCTGGAGTTTCTTGCCCT-TGAACAA 162 consensus_8911#4 C--CTGCAGCAGCAA-CTGGACGA---G-------CTGCAG---CTGGCCGA-TAAACCA 142 consensus_8911#2 CAGTCTCCAGGGCAGCCTTGGAAC---GGGCAGTGCCGAGA--ACAAGCTAG-GATTGAA 165 consensus_8911#3 CAGTTCTTCGGGAGGGGTTCGTAA---AAGCAAAACCTAACCTATTAGTAGAGTACACTA 164 consensus_8911#1 AAAGGGACAGCCCAAGCTGCGCCATCTCGACTATGCCGAACGTCACGGTTACCTGAAGGG 178 * * * consensus_8911#0 GCT--GCAACTGAGGACTACCTCA--ATGACTGTGTGCTCGTCGAGAANGGATCTTNGCC 218 consensus_8911#4 GAA--GCTCCTGTGGATGACGCCG--AACAACCTCTTCCC-CCAAGTGGCGATGAA---- 193 consensus_8911#2 ACT--GGTGGTGAAAACCAGTGCA--GAGGACACCCAACCCCAAAATTACTACCGAGATT 221 consensus_8911#3 GTTACGTTTCAGCAGTCGATGCGGTTGTGATGATTTAGTAAAAGAGAAGCAAAAGCGAAC 224 consensus_8911#1 TGT--CGTCAAGCAAATCATCCAGGACCCAGGCCGTGGTGCCCCGCTGGCGGTCGTAAAC 236 * * consensus_8911#0 T----GACATCTTCAAGCCCTACACTAACAAATTGAAAATTCAAGTGACGCTAAGTCCCA 274 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 C----CGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTC 277 consensus_8911#3 A----GAGCAGTTGTGTTGTTGTTTGATTTAGGTTTATAATTTGTGTAAGAAGAAGAGAG 280 consensus_8911#1 TTCCGCGACCCCTACCGCTTCCGCCTGAGCAAGCAGCTGTTCATTGCCGCCGAAGGTATG 296 consensus_8911#0 AGTGCTAAATGGCTGNAAAGANCCGTAAGGTANACCTTGTGACTGCCAGGCTTGGCCTAA 334 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 CGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAAC 337 consensus_8911#3 AAAAAAAACACAGCAAACAAAATTGAGTCGTGATTAAGGATTGTTAAGGAAACAGAAAAC 340 consensus_8911#1 TACACCGGCCAGTTCGTGTACTGCGGTCGTCGGGCCCAGCTGCAGATCGGTAACGTGATC 356 consensus_8911#0 GGNTATAGACTCGCACTAACTATAAAACCTGAGTAGCACCCGAGAGGGTAAGCTAAGAAN 394 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 CGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGT 397 consensus_8911#3 GCTTGCGCTTTTCGAAGGGAATTGGTGGTTTTCAGCTGTCGAAATTAGGAGTCGAAAATA 400 consensus_8911#1 CCGATCGGTCTGATGCCGGAAGGTACGATTGTGTGCAACCTGGAGGAGAAGACC--GGTG 414 consensus_8911#0 GTGTTAAAAACGGGGACACGTTANCTTCTAATTC-ACGGNCGCCAGAGAACCGATCGGGA 453 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 GTGCTGTCGG-ATGAATCGATGAAGTTCCAACTG-CCGCTGAGTTTCGTGCTGAAGAAGG 455 consensus_8911#3 ATTGCGCGGAGCTGATTCGCGTGTGCGATGA-TA-GTATTGTTGATTATATTTGATTAAA 458 consensus_8911#1 ACCGTGGCAAGCTGGCGCGTACGTCCGGCAACTACGCCTCGGTCATTGCGCACAACCCGG 474 consensus_8911#0 CGAATGCGGCGACATCAANGTTGAGTTCCACGGTAAACGGGAACANAACAAAGATTCCGG 513 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ATGAACAACCGCTGCCCATGTCG---TTTGACGCACGCCAAAAGTGGTCGTACTGCCCGA 512 consensus_8911#3 AAAACAAGGGTTAAGCCAAAAAGCGTGCTTAGGATTGCAACAAACGTTTGCAATGTTGTT 518 consensus_8911#1 ACACGAAGCGCACCCGCGTGAAGCTGCCGTCCGGTGCGAAGAAGGTGCTGCCGTCGGCTA 534 consensus_8911#0 TTAGAAGCGAAATTTNTGCTCCAGCCGGTGAGAAAAGGGAAGCCCTAACTTAGGCGCNAA 573 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 GCATGAACATGGTACGCAATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTAT 572 consensus_8911#3 TTGAAGAAAGCAAAAAAAAGGTGACCCATTGAAAC---AGGTTAGTGAGTTTAGAACGAG 575 consensus_8911#1 ACCGTGCGATGGTCGGTATCGTGGCCGGTGGCGGTC--GTATCGACAAGCCCATCCTGAA 592 consensus_8911#0 TCAACGTCGCCTTTCTATAGGACGTTNCATAGAGAGGNGCTTTTACCAGATTTACCACAA 633 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 CCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAG 632 consensus_8911#3 GGAACGTTTTCGGTCCCCGCCCCACAAAAATGGGTCCGCATTGTATTAATTACCGCACCC 635 consensus_8911#1 GGCCGGTCGTGCGTACCACAAGTACAAGGTGAAGCGTAACTGCTGGCCGAAGGTGCGTGG 652 consensus_8911#0 ANATTAGTTTAGTTGGACGGGGAGACTTAGCCCACCAGTAATAGACAGCCCGGGTCGCAT 693 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 CGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGA 692 consensus_8911#3 CGCATTGGGTGGACATTTGCATTGCTCCAAACGGTTTGTTTGACCGGGTGCGCTTTTC-- 693 consensus_8911#1 TGTGGCG-ATGAACCCCGTCGAGCATCCGCACGGTGGTGGTAACCATCAGCACATCGGTA 711 consensus_8911#0 TTACAACCACACTCTTGGGGCTTACCCAGGGGGCACAGATTAGAAAAGGGGCACCCGCCG 753 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 GCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTGGGGGGAGCATTTG----- 747 consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 AGGCGTCGACGGTCAAGCGTGGAACGCCTCCGGGTCGCAAGGTCGGTCTCATCGCTGCCC 771 consensus_8911#0 CGGCGTAAACAAACGCTTTTGGGCGGTCTCGAAACTTAAATGGCCCCGCAAAAGCAACTG 813 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 GTCGTACCGGTCGTATCCGTGGTGGCAAGGGCGACGAGAAGTTCAAGGAGAAGGAGAAGA 831 consensus_8911#0 GNGGCCGAAACCAAACAGCCAATCGCGGTCAACAGAGGACCAGGGGTCACACAGACAAGC 873 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 AGTAAGCGGAGTAGTGAGTGCTCTGTTTATGTTCTGGTCCCTGTTCTGCGCGTTTTGGGG 891 consensus_8911#0 CTTTTTATGGGNNGGAGAGCTTTTNAAACCCCTTAAGACACCTGAGGCTCAGGGGCNCGA 933 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 TGTTAGCGAGCTGAAGTGGTCCTATCG--------------------------------- 918 consensus_8911#0 AAATGGCGCACCCCGCAAAAGGGCGATGGGGTGGTGACCCGAAAGACAAGACCCANGGGN 993 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 ------------------------------------------------------------ consensus_8911#0 TGGNAANCCAAAGGATCAGGCGCCTGAAAGTTTTAACCCTNTTGNGNGGACNAACCGNGG 1053 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 ------------------------------------------------------------ consensus_8911#0 CGTAGCACCCGATAAAGAGCACCGGCCCCCGGNTTTTTTAAAAAAGCGCCAAAAAAAGAN 1113 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 ------------------------------------------------------------ consensus_8911#0 CCCATGGGTAAGANTACCCCNCCGCNGTAAGAAGTAGACGCCGANGTTATCTGGGGCANC 1173 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 ------------------------------------------------------------ consensus_8911#0 GATTTTCAGACTTTCATCCCCCGTAGGTGCGTAGCAAAACCGCAACGACGCTGGNTAGCA 1233 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 ------------------------------------------------------------ consensus_8911#0 NCACCACAGGGGGACCGACTTTTTAGTNGGTACCGCGGAAAATGGCCGCTATCCCCTAAA 1293 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 ------------------------------------------------------------ consensus_8911#0 AATGCACGTTNGCCCGCGATAAAGCACCAGCTGTGTGGNTGGTGGGGGACAAATAGCCTG 1353 consensus_8911#4 ------------------------------------------------------------ consensus_8911#2 ------------------------------------------------------------ consensus_8911#3 ------------------------------------------------------------ consensus_8911#1 ------------------------------------------------------------ consensus_8911#0 CCCCCCAGTGGGAGT 1368 consensus_8911#4 --------------- consensus_8911#2 --------------- consensus_8911#3 --------------- consensus_8911#1 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||