These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8914#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1867 fasta sequence [AAAACGCATGCTGCTGCACCTCACAACTCCAATCCATTCGATTGTTCAACGCTAATCAAGTCAAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGTCTTTTCGTGTACCCCGCGATCTTACCCTTGCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACACCCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAGCGAATTCAAAATCTTTGCGAAGACATGGATGAGGAAATGGCGGAACTGGATC-AAAAATGGCAAATGGGTTAAAACTACCAGTCGTGCTGGAAAACTCTGACTACAAAATCAAACCACCGGAGGTAAAGATAGAAAATTTGCCTGAAACAAAGCTGGATTCGTTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAATAAAATCTTCCTTCTACAACTTCCGGATGCTTTACCTGGAAAATCCGACGATGGAAACAAACGCCCGACCAACGGCGACGACAGCAAACCGGAAGCAACGGCAAATGGTGAAGAAACGCCAAAATATTGTACGGTACGCGATTTGGCAGAAGGTTACATTGGTAAAATAATCAGGTACCGCTCGGGAAAGGTAAAATTAAAGCTCGGAGAAATCATGTTTGACATCAGCGTCGGTATGGACACTGGATTCTTACAGGAGCTAGTTTCTATAAATACTAATTCAGTAGAACGGAATGGTAACATAATTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATG-AAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGAGACGGTTATGGCGG] [+] EMBL BX620474 [AAAACGCATGCTGCTGCACCTCACAACTCCAATCCATTCGATTGTTCAACGCTAATCAAGTCAAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGTCTTTTCGTGTACCCCGCGATCTTACCCTTGCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACACCCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAG ] [+] EMBL BX623076 [ CTGCACCTCACAACTCCAATCCATTCGATTGTTCAACGCTAATCAAGTCAAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGTCTTTTCGTGTACCCCGCGATCTTACCCTTGCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACACCCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAGCGAATTCAAAATCTTTGCGAAGACATGGATGAGGAAATGGCGGAACTGGATC AAAAATGGCAAATGGGTTAAAACTACCAGTCGTGCTGGAAAAC ] [+] EMBL BX617298 [ AGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAGCGAATTCAAAATCTTTGCGAAGACATGGATGAGGAAATGGCGGAACTGGATCAAAAAATGGCAAATGGGTTAAAACTACCAGTCGTGCTGGAAAACTCTGACTACAAAATCAAACCACCGGAGGTAAAGATAGAAAATTTGCCTGAAACAAAGCTGGATTCGTTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAATAAAATCTTCCTTCTACAACTTCCGGATGCTTTACCTGGAAAATCC ] [+] EMBL BM636944 [ ccgAACAAAGCTGGATTCGTTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAACAAAATCCTCCTTCTACAACTTCCGGATGCTTTACCTGGAAAATCCGACGATGGAAACAAACGCCCGACCAACGGCGACGACAGCAAACCGGAAGCAACGGCAAATGGTGAAGAAACGCCAAAATATTGTACGGTACGCGATTTGGCAGAAGGTTACATTGGTAAAATAATCAGGTACCGCTCGGGAAAGGTAAAATTAAAGCTCGGAGAAATCATGTTTGACATCAGCGTCGGTATGGACACTGGATTCTTACAGGAGCTAGTTTCTATAAATACTAATTCAGTAGAACGGAATGGTAACATAATTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATG AAATACACGATCCTAGATGGCAACCCT ] [-] EMBL BX623647 [ CTATCACCACAAAGTNGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGAAAATACACGATCNTAGATGGCAACCCTAGTGCCCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGGACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAGCGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCA ] [-] EMBL BX625841 [ GTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATG AAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGA ] [-] EMBL BX623528 [ ATTCTACATG AAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCT ] [-] EMBL BM621813 [ GACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCTAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTTATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCAGTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTACGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTcgg ] [-] EMBL BM592339 [ GCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGATCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACGCGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGATACGGTTATGGCGG] consensusID : consensus_8914#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 970 fasta sequence [CCGGGATTTTGGCTGAAAAGGGCGTTGTTTGTTCCCCTCTGTNTTCCGCGCTCCGGAAATTTGCCTTGATANAGAAAGCCCCAGANTATATGTTTTAATTGTAGACCGCGCAACCNGTGTTTTGGGCGCTTGTTTGGGTTNGAAATCCACCCAANGGGGGGCGCATATGTAAGGGCCGTTGCCGTGGTGNATTCCGNGCCCTATCTNGTGGGCTTCCGGAAAATGGGTGTTTGGGTTACAAACCCGGCCCGGTGTTAACTTAAAAAAATGTGTTTNTTTCTGTCCGGGATNTGGGCTCTTCCCCTGTATGTGGTCATAATGGGCCGTTACCTTTGTTGCGGCGTTGCGGAGTGTTNTGGCTCCATTGTGTTTTGTGTCCCCTAGGGTGTCGTCTGTGTGGCCTACCTNTTTTCAAGCAAAAAAGCCACCTGTTCCAGAGAAATTGTAANCTCCCTGTACGAGCCTGGAGTCCGTTCTTGCCAAGCACATACCCGCTCCTTCCGCAGTTTGGGCAGGCAAGTTGTGCCGGGTGTCACATTGCTTGCCGTTGCACTGCGCAAAATGGCCTTGCTCTGGCCAATTGCTGGCTTGCCTGCTTGCCTGCCGGGGGTTTTGGAGAACTATAACCAGGCAACGTGGAAACTAGCTTTGTATGCCTGCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTNTGCATCTNGCGTGCGATAGTTATTGGTGCAATCTNTTGAGCTGCTTCAATGCTGCTTGCCTGCAATCTGTGTTCTTACAGCTCCGGCACACAGGAACAGTTNTGGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACATAACCTCGGGGGATTCT] [-] EMBL AL694960 [CCGGGATTTTGGCTGAAAAGGGCGTTGTTTGTTCCCCTCTGTNTTCCGCGCTCCGGAAATTTGCCTTGATANAGAAAGCCCCAGANTATATGTTTTAATTGTAGACCGCGCAACCNGTGTTTTGGGCGCTTGTTTGGGTTNGAAATCCACCCAANGGGGGGCGCATATGTAAGGGCCGTTGCCGTGGTGNATTCCGNGCCCTATCTNGTGGGCTTCCGGAAAATGGGTGTTTGGGTTACAAACCCGGCCCGGTGTTAACTTAAAAAAATGTGTTTNTTTCTGTCCGGGATNTGGGCTCTTCCCCTGTATGTGGTCATAATGGGCCGTTACCTTTGTTGCGGCGTTGCGGAGTGTTNTGGCTCCATTGTGTTTTGTGTCCCCTAGGGTGTCGTCTGTGTGGCCTACCTNTTTTCAAGCAAAAAAGCCACCTGTTCCAGAGAAATTGTAANCTCCCTGTACGAGCCTGGAGTCCGTTCTTGCCAAGCACATACCCGCTCCTTCCGCAGTTTGGGCAGGCAAGTTGTGCCGGGTGTCACATTGCTTGCCGTTGCACTGCGCAAAATGGCCTTGCTCTGGCCAATTGCTGGCTTGCCTGCTTGCCTGCCGGGGGTTTTGGAGAACTATAACCAGGCAACGTGGAAACTAGCTTTGTATGCCTGCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTNTGCATCTNGCGTGCGATAGTTATTGGTGCAATCTNTTGAGCTGCTTCAATGCTGCTTGCCTGCAATCTGTGTTCTTACAGCTCCGGCACACAGGAACAGTTNTGGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACATAACCTCGGGGGATTCT] consensusID : consensus_8914#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 734 fasta sequence [CCCCGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGAAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCA] [-] EMBL CNS08DFF [CCCCGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGAAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCA] [+] EMBL CNS08DFG [ TTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGAAAAATGTTTTCGATTGCCCCTTTTCTATGCGTACTTTCGCTTCGATTTGCCCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTG ] consensusID : consensus_8914#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence [CCCAGGTTTTGTTCAACGCTAATCAAGTCAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGGTCTTTTCGTGTACCCCGCGATCTTACCCTTGNCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACAACCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCNATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAACAGATGGAAGGAATAAAAAGACCACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGGTCAACGTGCTTTGGTCCGGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCCGTATTCCGCTACGAAGGGAGNCTCNNAAAATAGCATTTGGGAAGATGAACCGCAAAGCGACATTCANANATCTTTGCCGAACGGACCTTGGCNTGANCGACACCT] [+] EMBL AL693209 [CCCAGGTTTTGTTCAACGCTAATCAAGTCAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGGTCTTTTCGTGTACCCCGCGATCTTACCCTTGNCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACAACCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCNATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAACAGATGGAAGGAATAAAAAGACCACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGGTCAACGTGCTTTGGTCCGGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCCGTATTCCGCTACGAAGGGAGNCTCNNAAAATAGCATTTGGGAAGATGAACCGCAAAGCGACATTCANANATCTTTGCCGAACGGACCTTGGCNTGANCGACACCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8914#0 ------------------------------------------------------------ consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 CCGGGATTTTGGCTGAAAAGGGCGTTGTTTGTTCCCCTCTGTNTTCCGCGCTCCGGAAAT 60 consensus_8914#0 ----------------------------AAAACGCATGCTGCTGCACCTCACAACTCCAA 32 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------CCCCGGCACATGTGGCCTTTTTTTTTTTTTTTTTTT 36 consensus_8914#1 TTGCCTTGATANAGAAAGCCCCAGANTATATGTTTTAATTGTAGACCGCGCAACCNGTGT 120 consensus_8914#0 TCCATTCGATTGTTCAACGCTA-----ATCAAGTCAAGATGGACCATA---GTCCGCGTA 84 consensus_8914#3 CCCAGGTT-TTGTTCAACGCTA-----ATCAAGTCA-GATGGACCATA---GTCCGCGTA 50 consensus_8914#2 TTTTTTTTTTTTTTTAACATCAGCACTATCAACACAAAGTTGAACGCA----TCCCCGGA 92 consensus_8914#1 TTTGGGCGCTTGTTTGGGTTNGAA---ATCCACCCAANGGGGGGCGCATATGTAAGGGCC 177 ** ** *** * ** * * * * * consensus_8914#0 TTAAGCAAG---AGCCAGGAAT-CGATACGCAATACTTAACAAAAGGAAACAATATAATC 140 consensus_8914#3 TTAAGCAAG---AGCCAGGAAT-CGATACGCAATACTTAACAAAAGGAAACAATATAATC 106 consensus_8914#2 CTGGGAATATTTATTCAAGAATTCTACATGAAATACACGATCCTAGATGGCAACCCTAGT 152 consensus_8914#1 GTTGCCGTGGTGNATTCCGNGCCCTATCTNGTGGGCTTCCGGAAAATGGGTGTTTGGGTT 237 * * * * * * consensus_8914#0 GGCAAT--GTTGCAGTTCCGATG--GAAGCAACGGTAAAACCA-GAGCGCCTACAG-TCT 194 consensus_8914#3 GGCAAT--GTTGCAGTTCCGATG--GAAGCAACGGTAAAACCA-GAGCGCCTACAGGTCT 161 consensus_8914#2 GCTCTT--GACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCG 210 consensus_8914#1 ACAAACCCGGCCCGGTGTTAACTTAAAAAAATGTGTTTNTTTCTGTCCGGGATNTGGGCT 297 * * ** ** * * * consensus_8914#0 TTTCG---------TGTACCCCGC-GATCTTACCCTTGCC-AAT-GGTCGCAC-GACGAA 241 consensus_8914#3 TTTCG---------TGTACCCCGC-GATCTTACCCTTGNCCAAT-GGTCGCAC-GACGAA 209 consensus_8914#2 ATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGAT 270 consensus_8914#1 CTTCCCCTGTATG-TGGTCATAATGGGCCGTTACCTTTGTTGCGGCGTTGCGGAGTGTTN 356 * * * * * * * * ** * consensus_8914#0 GCCACCCAACAACAAAAAAGTCTACACC----CCGAACTTAA-----ATGCAGTGAGAAA 292 consensus_8914#3 GCCACCCAACAACAAAAAAGTCTACAAC----CCGAACTTAA-----ATGCAGTGAGAAA 260 consensus_8914#2 GTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTAT-----GCGTACTTTCGCT 325 consensus_8914#1 TGGCTCCATTGTGTTTTGTGTCCCCTAGGGTGTCGTCTGTGTGGCCTACCTNTTTTCAAG 416 * ** * * * * consensus_8914#0 CAAAAATAC----TGATGTAAAA--ACTGCA-TCAACCGGTCC-----CAAAGGCCGAGC 340 consensus_8914#3 CAAAAATAC----TGATGTAAAA--ACTGCNATCAACCGGTCC-----CAAAGGCCGAGC 309 consensus_8914#2 TCGATTTGC----TCCTTTTTGTCCATTTCTCTTTGCTCTTTCAG---CAAAAGCCTTTC 378 consensus_8914#1 CAAAAAAGCCACCTGTTCCAGAGAAATTGTAANCTCCCTGTACGAGCCTGGAGTCCGTTC 476 * * * * * * * * * * ** * consensus_8914#0 TAAGACTGATCGCAATAGAAATGATAA-AGATGGAAGGAATAAAAAGAACACCTTGATC- 398 consensus_8914#3 TAAGACTGATCGCAATAGAAATGATAACAGATGGAAGGAATAAAAAGACCACCTTGATC- 368 consensus_8914#2 AAGAATGTACTCCTTACGAGCTGATCG-TTCTGCAGCCAACCGCTCTTCGCGTTTGGCAG 437 consensus_8914#1 TTGCCAAGCACATACCCGCTCCTTCCGCAGTTTGGGCAGGCAAGTTGTGCCGGGTGTCAC 536 * * ** consensus_8914#0 CAGACGTCTGGTATCTTTTCG---GATGGTTTAGCTCAACGTGCTTTGCTCCG-TACGTC 454 consensus_8914#3 CAGACGTCTGGTATCTTTTCG---GATGGTTTAGGTCAACGTGCTTTGGTCCGGTACGTC 425 consensus_8914#2 CAGTTTGCCGGTTCCATTCTT---CGT--TCCTGCGCAATGCTTCCTGCCATTCTGCTTC 492 consensus_8914#1 ATTGCTTGCCGTTGCACTGCGCAAAATGGCCTTGCTCTG-GCCAATTGCTGGCTTGCCTG 595 ** * * * * * * ** * * * consensus_8914#0 CAGATCAGACAAA---TCTAGTTCCTCG-----AAAGAACCTGGGGACTCAATTCAGAAA 506 consensus_8914#3 CAGATCAGACAAA---TCTAGTTCCTCG-----AAAGAACCTGGGGACTCAATTCAGAAA 477 consensus_8914#2 CTCTTCCTCCGGGG--TTTGGAGAACTA-----AACCGGCACGTGAAACTAGCTTGTATG 545 consensus_8914#1 CTTGCCTGCCGGGGGTTTTGGAGAACTATAACCAGGCAACGTGGAAACTAGCTTTGTATG 655 * * * * * * * * * * * * consensus_8914#0 CCC-GTATTC-GCTA--GAGGGAGCT--CAAAAA---TAG-ATTTGG--AAGATGAACG- 553 consensus_8914#3 CCCCGTATTCCGCTACGAAGGGAGNCTCNNAAAA---TAGCATTTGG-GAAGATGAACCG 533 consensus_8914#2 CCT-CTACTTCATCGCGCAAGAAGTTTCGTACCGC--TTTCATCTGC-GTGCGATAGTTA 601 consensus_8914#1 CCTGCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTNTGCATCTNGCGTGCGATAGTTA 715 ** ** * * ** * ** * * consensus_8914#0 --AAAGCGA-ATTCAAAA-TCTTT-------GCGAAGACATGGATGAGGAAATGGCGGA- 601 consensus_8914#3 C-AAAGCGACATTCANANATCTTT-------GCCGA---ACGGACCTTGGCNTGANCGAC 582 consensus_8914#2 T-TGTGCAATCTTTTTAGCTCTTC-------AATCTCTTCCTCAATCTGTTTCTTGCGCT 653 consensus_8914#1 TTGGTGCAATCTNTTGAGCTGCTTCAATGCTGCTTGCCTGCAATCTGTGTTCTTACAGCT 775 ** * * * * * * * consensus_8914#0 ACTGGATCAAAAATGG---CAAATGGGTTAAAACTACCAGTCGTGCTGGAAAACTCTGAC 658 consensus_8914#3 ACCT-------------------------------------------------------- 586 consensus_8914#2 CCGGCACACGGAACAG---TTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAA 710 consensus_8914#1 CCGGCACACAGGAACAGTTNTGGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAA 835 * consensus_8914#0 TACAAAATCAAACCACCGGAGGTAAAGATAGAAAATTTGCCTGAAACAAAGCTGGATTCG 718 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 AGCGAACTGTGGTGTATTGAAGCA------------------------------------ 734 consensus_8914#1 AGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAA 895 consensus_8914#0 TTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAATAAAATCTTCCTTCTACAA 778 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 AAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACATA 955 consensus_8914#0 CTTCCGGATGCTTTACCTGGAAAATCCGACGATGGAAACAAACGCCCGACCAACGGCGAC 838 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ACCTCGGGGGATTCT--------------------------------------------- 970 consensus_8914#0 GACAGCAAACCGGAAGCAACGGCAAATGGTGAAGAAACGCCAAAATATTGTACGGTACGC 898 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 GATTTGGCAGAAGGTTACATTGGTAAAATAATCAGGTACCGCTCGGGAAAGGTAAAATTA 958 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 AAGCTCGGAGAAATCATGTTTGACATCAGCGTCGGTATGGACACTGGATTCTTACAGGAG 1018 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 CTAGTTTCTATAAATACTAATTCAGTAGAACGGAATGGTAACATAATTAACATCAGCACT 1078 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 ATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGA 1138 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 AATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTC 1198 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 TGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTAC 1258 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 CAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTC 1318 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 CTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTT 1378 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 CAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTC 1438 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 TTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCA 1498 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 TTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTA 1558 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 TGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATT 1618 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 GTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACG 1678 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 GAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGT 1738 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 GTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTAT 1798 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 ATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGAGACGG 1858 consensus_8914#3 ------------------------------------------------------------ consensus_8914#2 ------------------------------------------------------------ consensus_8914#1 ------------------------------------------------------------ consensus_8914#0 TTATGGCGG 1867 consensus_8914#3 --------- consensus_8914#2 --------- consensus_8914#1 --------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||