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Anopheles gambiae
cluster # 8919 cluster # 8919       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8919#0 length = 1461 sequences # 12  
consensus_8919#1 length = 742 sequences # 1  

consensusID : consensus_8919#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1461
fasta sequence
                              [ATTATACGTCACAGTGTGTATTTTTCTTCCCCATTTTGTTTGGAATATGGAACAACGTTTCGCTCCGCCCAAATCTAAAGCCGCTCCGTTGCGGAGATAATCACACTTCCAGCAGGGACGTTCTGCTGCCGCCATCCTTCGCCGGTGGCAATCGCAACACCCTCCGGTACACCGTGCTGGCCATGCGGCCCAAATCGGCAAACGTAAGCTTGCTGCGCTTGCTGTACACGTTCAGGTAGATGCCAAACACGACGATCAGCCCGGACCAGAGATACTGGATGGTGAACGGTTTGCTGAAGAACACAAACGACAGCGCTATCGTGACCGCCTTCCGGGCCGTCGTAACCGTGGCCGCCAGCGGGGCACCGCACGTCCGCACCAGCGTCAGCACGATCTGTGTCCCCAGGTACCCGGTCAGGCTAAACAGAAACGCGTACCCGTACGTTTCCATCGGATACCGGGCACAAAACGCAACGCCCTGCACCAAATGGCCCGACAGCAGCATTACCACCGCCAGATACACGAACCCAATGCCGTACGAGTAGATCACCACCTCATTGTTCGGTGCCCGGTGCTCCCGCATCGCCTTTTCCTGCACGTTCCCGATCGCCGCATCGCACAGAAGGGCCAGCGAGATGAGGAACACACCGAACCGGTTGAAATCCGGCTGCACCTGCGAATCGGCCAGCGTAAACAGGATCAACCCGAGGCACATGGCGGTCGCGGCGAAAAAGTCCATCGGGCCGTGCTTCTTGCCCTGTATCAGCACGCTCCCGATCAGCACCGGGA-TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG-CCGAGGGTTAGGAACGCTAGCAG-CGCGTACGTGCGCAGCGGAATGCACCGCGGCA-CGGTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGGAGTTCAAGCGGAAATGCTTAATTATTTCATGTTAGCTTGTTTTCGGCTAAAGTTTACTCGTGGAATAGATTTGCGAATTTCCAATACGGGACCGGAACGTAAACAAAACAGATGATTCGCTTTGACAGTTGGGTGGCCAAGGTCGG]

[+] EMBL CNS096O3             [ATTATACGTCACAGTGTGTATTTTTCTTCCCCATTTTGTTTGGAATATGGAACAACGTTTCGCTCCGCCCAAATCTAAAGCCGCTCCGTTGCGGAGATAATCACACTTCCAGCAGGGACGTTCTGCTGCCGCCATCCTTCGCCGGTGGCAATCGCAACACCCTCCGGTACACCGTGCTGGCCATGCGGCCCAAATCGGCAAACGTAAGCTTGCTGCGCTTGCTGTACACGTTCAGGTAGATGCCAAACACGACGATCAGCCCGGACCAGAGATACTGGATGGTGAACGGTTTGCTGAAGAACACAAACGACAGCGCTATCGTGACCGCCTTCCGGGCCGTCGTAACCGTGGCCGCCAGCGGGGCACCGCACGTCCGCACCAGCGTCAGCACGATCTGTGTCCCCAGGTACCCGGTCAGGCTAAACAGAAACGCGTACCCGTACGTTTCCATCGGATACCGGGCACAAAACGCAACGCCCTGCACCAAATGGCCCGACAGCAGCATTACCACCGCCAGATACACGAACCCAATGCCGTACGAGTAGATCACCACCTCATTGTTCGGTGCCCGGTGCTCCCGCATCGCCTTTTCCTGCACGTTCCCGATCGCCGCATCGCACAGAAGGGCCAGCGAGATGAGGAACACACCGAACCGGTTGAAATCCGGCTGCACCTGCGAATCGGCCAGCGTAAACAGGATCAACCCGAGGCACATGGCGGTCGCGGCGAAAAAGTCCATCGGGCCGTGCTTCTTGCCCTGTATCAGCACGCTCCCGATCAGCACCGGGA TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAAATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGGGTCAGGAACGCTAGCAG CGCGTta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS095RS             [                                                                                                      ACACTTCCAGCAGGGACGTTCTGCTGCCGCCATCCTTCGCCGGTGGCAATCGCAACACCCTCCGGTACACCGTGCTGGCCATGCGGCCCAAATCGGCAAACGTAAGCTTGCTGCGCTTGCTGTACACGTTCAGGTAGATGCCAAACACGACGATCAGCCCGGACCAGAGATACTGGATGGTGAACGGTTTGCTGAAGAACACAAACGACAGCGCTATCGTGACCGCCTTCCGGGCCGTCGTAACCGTGGCCGCCAGCGGGGCACCGCACGTCCGCACCAGCGTCA CACGATCTGTATCCCCAGGTACCCGGTCAGGCTAAACAGAAACGCGTACCCGTACGTTTCCATCGGATACCGGGCACAAAACGCAACGCCCTGCACCAAATGGCCCGACAGCAGCATTACCACCGCCAGAAACACGAACCCAATGCCGTACGAGTAGATCACCACCTCATTGTTCGGTGCCCGGTGCTCCCGCATCGCCTTTTCCTGCACGTTCCCGATCGCCGCATCGCACAGAAGGGCCAGCGAGATGAGGAACACACCGAACCGGTTGAAATCCGGCTGCACCTGCGAATCGGCCAGCGTAAACAGGATCAACCCGAGGCACATGGCGGTCGCGGCGAAAAAGTCCATCGGGCCGTGCTTTTTGCCCTGTATCAGCACGCTCCCGATCAGCACCGGGA TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGGGTCAGGAACGCTAGCAG CGCGTACGTGCGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS095RR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cTCGGTGCCCGGTGCTCCCGCATCGCCTTTTCCTGCACGTTCCCGATCGCCGCATCGCACAGAAGGGCCAGCGAGATGAGGAACACACCGAACCGGTTGAAATCCGGCTGCACCTGCGAATCGGCCAGCGTAAACAGGATCAACCCGAGGCACATGGCGGTCGCGGCGAAAAAGTCCATCGGGCCGTGCTTCTTGCCCTGTATCAGCACGCTCCCGATCAGCACCGGGATTCAG TTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGGGTCAGGAACGCTAGCAG CGCGTACGTGCGAAGCGGAATGCACCGCGGCA CGGTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGAGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCAT                                                                                                                                                                  ]
[-] EMBL BM651366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACATGGCGGTCGCGGCGAAAAAGTCCATCGGGCCGTGCTTCTTGCCCTGTATCAGCACGCTCCCGATCAGCACCGGGA TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGGGTTAGGAACGCTAGCAG CGCGTACGTGCGCAGCGGAATGCACCGCGGCA CGGTCGTTCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTAGGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCAGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGGAGTTCAAGCGGAAATGCTTAATTATTTCATGTTAGCTTGTTTTCGGCTAAAGTTTACTCGTGGAATATGGTTGCGAATTTCCcgg                                                             ]
[-] EMBL BM611991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGTCCATCGGGCCGTGCTTCTTGCCCTGTATCAGCACGCTCCCGATCAGCACCGGGA TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGCGTTAGGAACGCTAGCAG CGCGTACGTGCGCAGCGGAATGCACCGCGGCA CGGTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTTGTTGGAGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGTAGTTTAAGCGGAAATGCTTAATTATTTCATGGTGGTTCGTTTTCGGCTAAAGTTTACTCGTGGAATAGATTTGCGAATTTCCAATACGGGACCGG                                                   ]
[-] EMBL BM649287             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGTGCTTCTTGCCCTGTATCAGCACGCTCCCGATCAGCACCGGGA TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGGGTTAGGAACGCTAGCAG CGCGTACGTGCGCAGCGGAATGCACCGCGGCA CGGTCGTTCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTAGGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGGAGTTCAAGCGGAAATGCTTAATTATTTCATGTTAGCTTGTTTTCGGCTAAAGTTTACTCGTGGcgg                                                                                ]
[-] EMBL BX602305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCAGCACGCTCCCGATCAGCACGGGGA TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGGGTTAGGAACGCTAGCAG CGCGTACGTGCGCAGCGGAATGCACCGCGGCA CGGTCGTTCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTAGGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGGAGTTCAAGCGGAAATGCTTAATTATTTCATGTTAGCTTGTTTTCGGCTAAAGTTTACTCGTGGAATATGGTTGCGAATTTCC                                                                ]
[-] EMBL AL930573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACGCTCCCGATCAGCACCGGGA TCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGCGTTAGGAACGCTAGCAG CGCGTACGTGCGCAGCGGAATGCACCGCGGCA CGGTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCATACA CA GTAGA GGCG ACACGCCACCTCGGCgat                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BM612741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGATAGCCGACGCTCGAGTTGGACAGACCCATCGTG CCGAGCGTTAGGAACGCTAGCAG CGCGTACGTGCGCAGCGGAATGCACCGCGGCA CGGTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTTGTTGGAGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGTAGTTTAAGCGGAAATGCTTAATTATTTCATGGTGGTTCGTTTTCGGCTAAAGTTTACTCGTGGAATAGATTTGCGAATTTCCAATACGGGACCGTAACGTAAACAAAACAGATGATTCGCTTTGACAGTTGGGTGGCCAAGGTCGG]
[-] EMBL BM607225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GACAGACCCATTGGGTCCGAGCGTTAGGAACGCTAGCAGCCGCGTACGTGCGCAGCGGAATGCACCGCGGCACCGGTTGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTTGTTGGAGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGTAGTTTAAGCGGAAATGCTTAATTATTTCATGGTGGTTCGTTTTCGGCTAAAGTTTACTCGTGGAATAGATTTGCGAATTTCCAATACGGGcgg                                                     ]
[-] EMBL CNS096O2             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATTTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGTAGTTTAAGCGGAAATGCTTAATTATTTCATGGTGGTTCGTTTTCGGC                                                                                                   ]
[-] EMBL BX602677             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTCCAGCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATATCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGGAGTTCAAGCGGAAATGCTTAATTATTTCATGTTAGCTTGTTTTCGGCTAAAGTTTACT                                                                                        ]


>consensus_8919#0 ATTATACGTCACAGTGTGTATTTTTCTTCCCCATTTTGTTTGGAATATGGAACAACGTTT CGCTCCGCCCAAATCTAAAGCCGCTCCGTTGCGGAGATAATCACACTTCCAGCAGGGACG TTCTGCTGCCGCCATCCTTCGCCGGTGGCAATCGCAACACCCTCCGGTACACCGTGCTGG CCATGCGGCCCAAATCGGCAAACGTAAGCTTGCTGCGCTTGCTGTACACGTTCAGGTAGA TGCCAAACACGACGATCAGCCCGGACCAGAGATACTGGATGGTGAACGGTTTGCTGAAGA ACACAAACGACAGCGCTATCGTGACCGCCTTCCGGGCCGTCGTAACCGTGGCCGCCAGCG GGGCACCGCACGTCCGCACCAGCGTCAGCACGATCTGTGTCCCCAGGTACCCGGTCAGGC TAAACAGAAACGCGTACCCGTACGTTTCCATCGGATACCGGGCACAAAACGCAACGCCCT GCACCAAATGGCCCGACAGCAGCATTACCACCGCCAGATACACGAACCCAATGCCGTACG AGTAGATCACCACCTCATTGTTCGGTGCCCGGTGCTCCCGCATCGCCTTTTCCTGCACGT TCCCGATCGCCGCATCGCACAGAAGGGCCAGCGAGATGAGGAACACACCGAACCGGTTGA AATCCGGCTGCACCTGCGAATCGGCCAGCGTAAACAGGATCAACCCGAGGCACATGGCGG TCGCGGCGAAAAAGTCCATCGGGCCGTGCTTCTTGCCCTGTATCAGCACGCTCCCGATCA GCACCGGGATCAGCTTGCAGCACTTGAAGATGACCTGCGTCGGGTAGTTCAGATAGCCGA CGCTCGAGTTGGACAGACCCATCGTGCCGAGGGTTAGGAACGCTAGCAGCGCGTACGTGC GCAGCGGAATGCACCGCGGCACGGTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACG CGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAATCCTTCCA GCGTAAAGATCAGCTCCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCAC AGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGA TCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTCAGGTCCTTGTCGC CGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCTTTGTTAGATT TACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGGAGTTC AAGCGGAAATGCTTAATTATTTCATGTTAGCTTGTTTTCGGCTAAAGTTTACTCGTGGAA TAGATTTGCGAATTTCCAATACGGGACCGGAACGTAAACAAAACAGATGATTCGCTTTGA CAGTTGGGTGGCCAAGGTCGG



consensusID : consensus_8919#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 742
fasta sequence
                              [CTGCACTTCGANGCGGCCAGCGTAACAGGATCTAANCCCGAGCACATGCCGTCCGCGGCNGAATNNAGTCCATCGGGCCGTGCTTCTTGCCCCTGTATCAGCACGTCTCCCGATCAGCACCGGGATCAGCTTGCAGCACTTGAAGATGACCTGCGTTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTGCCGAGCGGTTAGGAACGCTAGCAGCGCGTACGTTGCGCAGCGGAATGCACCCGGCACGTTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGCGGAATCCTTCCAGCGTAAAGATCAGCTCNCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTGCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTTGTTGGAGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGTAGTTTAAGCGGAAATGCTTAATTATTTCATGGTGGTTACGTTTTCGGCTAAAGNTTACTCGTGGAATAGATTTTTACCNGCGGCGATC]

[-] EMBL AL929741             [CTGCACTTCGANGCGGCCAGCGTAACAGGATCTAANCCCGAGCACATGCCGTCCGCGGCNGAATNNAGTCCATCGGGCCGTGCTTCTTGCCCCTGTATCAGCACGTCTCCCGATCAGCACCGGGATCAGCTTGCAGCACTTGAAGATGACCTGCGTTCGGGTAGTTCAGATAGCCGACGCTCGAGTTGGACAGACCCATCGTGCCGAGCGGTTAGGAACGCTAGCAGCGCGTACGTTGCGCAGCGGAATGCACCCGGCACGTTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGCGGAATCCTTCCAGCGTAAAGATCAGCTCNCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTGCAGGTCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTTGTTGGAGGCTTTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGTAGTTTAAGCGGAAATGCTTAATTATTTCATGGTGGTTACGTTTTCGGCTAAAGNTTACTCGTGGAATAGATTTTTACCNGCGGCGATC]


>consensus_8919#1 CTGCACTTCGANGCGGCCAGCGTAACAGGATCTAANCCCGAGCACATGCCGTCCGCGGCN GAATNNAGTCCATCGGGCCGTGCTTCTTGCCCCTGTATCAGCACGTCTCCCGATCAGCAC CGGGATCAGCTTGCAGCACTTGAAGATGACCTGCGTTCGGGTAGTTCAGATAGCCGACGC TCGAGTTGGACAGACCCATCGTGCCGAGCGGTTAGGAACGCTAGCAGCGCGTACGTTGCG CAGCGGAATGCACCCGGCACGTTCGTGCGCTCCACCGATCGTTCGATGTACCCGAACGCG GTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGCGGAATCCTTCCAGCG TAAAGATCAGCTCNCTGCATGTACCCGTACACCAGGTAGAGGGCGAACACGCCGCCACAG CACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACAGTATCTTGATC TCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTGCAGGTCCTTGTCGCC GAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTTGTTGGAGGCTTTGTTAGATTT ACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAGATTGTAGTTTA AGCGGAAATGCTTAATTATTTCATGGTGGTTACGTTTTCGGCTAAAGNTTACTCGTGGAA TAGATTTTTACCNGCGGCGATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8919#0      ATTATACGTCACAGTGTGTATTTTTCTTCCCCATTTTGTTTGGAATATGGAACAACGTTT 60
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      CGCTCCGCCCAAATCTAAAGCCGCTCCGTTGCGGAGATAATCACACTTCCAGCAGGGACG 120
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      TTCTGCTGCCGCCATCCTTCGCCGGTGGCAATCGCAACACCCTCCGGTACACCGTGCTGG 180
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      CCATGCGGCCCAAATCGGCAAACGTAAGCTTGCTGCGCTTGCTGTACACGTTCAGGTAGA 240
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      TGCCAAACACGACGATCAGCCCGGACCAGAGATACTGGATGGTGAACGGTTTGCTGAAGA 300
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      ACACAAACGACAGCGCTATCGTGACCGCCTTCCGGGCCGTCGTAACCGTGGCCGCCAGCG 360
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      GGGCACCGCACGTCCGCACCAGCGTCAGCACGATCTGTGTCCCCAGGTACCCGGTCAGGC 420
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      TAAACAGAAACGCGTACCCGTACGTTTCCATCGGATACCGGGCACAAAACGCAACGCCCT 480
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      GCACCAAATGGCCCGACAGCAGCATTACCACCGCCAGATACACGAACCCAATGCCGTACG 540
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      AGTAGATCACCACCTCATTGTTCGGTGCCCGGTGCTCCCGCATCGCCTTTTCCTGCACGT 600
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      TCCCGATCGCCGCATCGCACAGAAGGGCCAGCGAGATGAGGAACACACCGAACCGGTTGA 660
consensus_8919#1      ------------------------------------------------------------
                                                                                  

consensus_8919#0      AATCCGGCTGCACCTGCGAATCGGCCAGCGTAAACAGGATC-AACCCGAGGCACATGGCG 719
consensus_8919#1      -------CTGCACTT-CGANGCGGCCAGCGTAA-CAGGATCTAANCCCGAGCACATGCCG 51
                             ****** * ***  ************ ******* ** **   ******* **

consensus_8919#0      GTCGCGGCGAAA--AAGTCCATCGGGCCGTGCTTCTTGCCC-TGTATCAGCACG-CTCCC 775
consensus_8919#1      TCCGCGGCNGAATNNAGTCCATCGGGCCGTGCTTCTTGCCCCTGTATCAGCACGTCTCCC 111
                        ******  **   ************************** ************ *****

consensus_8919#0      GATCAGCACCGGGATCAGCTTGCAGCACTTGAAGATGACCTGCGT-CGGGTAGTTCAGAT 834
consensus_8919#1      GATCAGCACCGGGATCAGCTTGCAGCACTTGAAGATGACCTGCGTTCGGGTAGTTCAGAT 171
                      ********************************************* **************

consensus_8919#0      AGCCGACGCTCGAGTTGGACAGACCCATCGTGCCGAG-GGTTAGGAACGCTAGCAGCGCG 893
consensus_8919#1      AGCCGACGCTCGAGTTGGACAGACCCATCGTGCCGAGCGGTTAGGAACGCTAGCAGCGCG 231
                      ************************************* **********************

consensus_8919#0      TACGT-GCGCAGCGGAATGCACCGCGGCACGGTCGTGCGCTCCACCGATCGTTCGATGTA 952
consensus_8919#1      TACGTTGCGCAGCGGAATGCACC-CGGCACGTTCGTGCGCTCCACCGATCGTTCGATGTA 290
                      ***** ***************** ******* ****************************

consensus_8919#0      CCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGGGCGGAA 1012
consensus_8919#1      CCCGAACGCGGTGTAGTACGCGAACTGGACCAGCGTCAGGTACCAGCCGTACGG-CGGAA 349
                      ****************************************************** *****

consensus_8919#0      TCCTTCCAGCGTAAAGATCAGCTCC-TGCATGTACCCGTACACCAGGTAGAGGGCGAACA 1071
consensus_8919#1      TCCTTCCAGCGTAAAGATCAGCTCNCTGCATGTACCCGTACACCAGGTAGAGGGCGAACA 409
                      ************************  **********************************

consensus_8919#0      CGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACA 1131
consensus_8919#1      CGCCGCCACAGCACAGCAGGAACTGGGTCGTCCGGTTGTAGTGCGTGAGGTCGAAGAACA 469
                      ************************************************************

consensus_8919#0      GTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTT-CAGG 1190
consensus_8919#1      GTATCTTGATCTCCCGCTCCGGCGACTGGTCCCGGTCCCGGTGGCGGTTCCGGTTGCAGG 529
                      ******************************************************* ****

consensus_8919#0      TCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTCGTTGGGGGCT 1250
consensus_8919#1      TCCTTGTCGCCGAGATAGATCACCTCACTCTTGGCGCCGGCCATCGTTTTGTTGGAGGCT 589
                      ************************************************* ***** ****

consensus_8919#0      TTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAG 1310
consensus_8919#1      TTGTTAGATTTACACTAAACGCTAATCAAACTAACGCTTATATTAGCATGATCTTTGGAG 649
                      ************************************************************

consensus_8919#0      ATTGGAGTTCAAGCGGAAATGCTTAATTATTTCATGTTAGCT-TGTTTTCGGCTAAAGTT 1369
consensus_8919#1      ATTGTAGTTTAAGCGGAAATGCTTAATTATTTCATGGTGGTTACGTTTTCGGCTAAAGNT 709
                      **** **** ************************** * * *  ************** *

consensus_8919#0      TACTCGTGGAATAGATTTGCGAATTTCCAATACGGGACCGGAACGTAAACAAAACAGATG 1429
consensus_8919#1      TACTCGTGGAATAGATTT-----TTACCNGCG-GCGATC--------------------- 742
                      ******************     ** **     * ** *                     

consensus_8919#0      ATTCGCTTTGACAGTTGGGTGGCCAAGGTCGG 1461
consensus_8919#1      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)