These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8981#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1665 fasta sequence [CCGCCCACGCGTCCGGCACTTTGTTATGCTTCGGGGGGTTGTTTCGTTCGCCTGATTCCGAGGACACCTTTTCTTGTCGC-ATTTGCTTGTGCAGTGTTGGTGTACTGCGTGTATTACGACGCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAGCAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCGTAAATCATCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCATCCCCTGCCCCCGGAGAGCGTTGTTTAGAACAACGGCAAAAACATCTGTTTCGCGGAGGACGAACCCATACCGGTGGCCGGAGCAGTGCAACCGTTCGAACCGTGGAAAGGCACGGAACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACTCACGCGCGGTATAAAGCACGACCGCTGCCACGATGAGCCGGTTATTCGGTAGTAGTAGTGGTTCGGTGCTCGGCACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGATACGGAGAAGATCTACGAAAACATCTTGCGCGATCTGTTGAAATCGTACAACTCGCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT-CCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG-AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTTGGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGC-CAC-GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAATGTGCTAATTGT] [+] EMBL BM595629 [CCGCCCACGCGTCCGGCACTTTGTTATGCTTCGGGGGGTTGTTTCGTTCGCCTGATTCCGAGGACACCTTTTCTTGTCGC ATTTGCTTGTGCAGTGTTGGTGTACTGCGTGTATTACGACGCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAGCAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCGTAAATCATCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCATCCCCTGCCCCCGGAGAGCGTTGTTTAGAACAACGGCAAAAACATCTGTTTCGCGGAGGACGAACCCATACCGGTGGCCGGAGCAGTGCAACCGTTCGAACCGTGGAAAGGCACGGAACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACTCACGCGCGG ] [+] EMBL BM637556 [ taCGAGGACACCTTTTCTTGCCGCAATTTGCTTGTGCAGTGTTGGTGTAGTGCGTGTAGTACGACGCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAGCAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCGTAAATCAGCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCAACCCCTGCCCCCGGCGAGCGTTGTTTAGAACAACGGCAAAAACATCTGTTTCGCGGAGGACGAATCCATACCGGTGGCCGGAGCAGTGCAACCGTTCGAACCGTGGGAAGGCACGGAACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACACACGCGCGGTATAAAGCACGACCGCTGCCACGATGAGCCGGTTATTCGGTAGTAGTAGTGGTTCGGTGCTCGGCACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGATACGGAGAAGATCTACGAAAACATCTTGC ] [+] EMBL CNS08YOW [ AGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAA GTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGATACGGAGAAGATCTACGAAAACATCTTGCGCGATCTGTTGAAATCGTACAACTCGCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT CCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTTGGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGC CACGGTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCG ] [+] EMBL CNS0991E [ CGCCGTA CCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT CCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTATTTGGTGTGTTCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGA CAC GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCG ] [-] EMBL CNS08YOX [ GCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGAAACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT CCCGA CAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACAC GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAA ] [-] EMBL CNS092RR [ GCTGCCCTGCTCGGTGGATGAGTTTTTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAAAACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACCCCCCGAAAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACAC GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAATGTGCTAATTGT] consensusID : consensus_8981#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1251 fasta sequence [AGAATCGCCCGAGGTTNTGCTGGGCTTTCAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACGTGCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACACGACAGTGCACGTGCAGTGTCTTTAGGCTACAAAGTGAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTCAACCTGTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTCTGTCCTCAACCAACACACCTGATGTCTGCTGCTGTGCTGGAATGTCTGGAGCACCTGTCCCGCAGTTGGTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGCTTCGAAACTGAAACCGGAGTTCATCAAGACATGCCTGGTTCGATCAGCCAGACTTTGTCGACTGTTCCACCGAGTCCTGTCCAGGGACTGTTTTGACAAGCTCGTTACCTGGCATCGAAGGGCTCGAGCATGTCGGCACGATCGACCCGATGAAGATCACGCAAAATAAGGATCCTGCAACGGTGACGGACCCGGTCAGTGTCAACGCGTCACTTTCCAAGGTGGTGGTCACCGGATTCGCCAG-ACCAAAGTCCTCCGCAATGTCGCTCAGCCAGCTAAGAACTTTTGGCT-GGAAACGCACATCCCGCTGCCTGAACATGCGGCTCGAGGGCAACTATCACATGCAGGGCCGCATACTGGTGATACCGCTGAACGGGCACGGCAAGTGCTGGTTTGAGCCGAGCGGCATGGACATCATTATGCGCACCAGCACCGACCTGTACCAGAAGAATGGGCACGTGTTCTACAACGTGACCGGCACGAAGGTGGACTACACCATCTCCGGCCTGCGCCTGCACATGGGCAACCTGTTCGAGGGCGTGAAGGTGCTGGAGGACAGCACCAACCAGTACCTGAACGACAACTGGCGCCCGGTTTCGGAAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGAACATCTTCCACCAGCTGCCGGCCGACTACTTTGTGGCGGATCTGCCGCGGAGCGGCGGCTCGTAGGGGATCGGACGCGGCCCGGTTGCTACCGCCTGTACATACAGCAATGGTGACACAGAAAATTGTACTTGTAGGCGTTTAGGGGCAGGATTGAACAAAATAGTTGTATTAAATGTTAGCTAAACGCGACCGTACAAAAAAAAAAA] [+] EMBL AL931923 [AGAATCGCCCGAGGTTNTGCTGGGCTTTCAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACGTGCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACACGACAGTGCACGTGCAGTGTCTTTAGGCTACAAAGTGAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTCAACCTGTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTCTGTCCTCAACCAACACACCTGATGTCTGCTGCTGTGCTGGAATGTCTGGAGCACCTGTCCCGCAGTTGGTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGCTTCGAAACTGAAACCGGAGTTCATCAAGACATGCCTGGTTCGATCAGCCAGACTTTGTCGACTGTTCCACCGAGTCCTGTCCAGGGACTGTTTTGACAAGCTCGTTACCTGGCATCGAAGGGCTCGAGCATGTCGGCACGATCGACCCGATGAAGATCACGCAAAATAAGGATCCTGCAACGGTGACGGACCCGGTCAGTGTCAACGCGTCACTTTCCAAGGTGGTGGTCACCGGATTCGCCAG ACCAAAGTCCTCCGCAATGTCGCTCAGCCAGCTAAGAACTTTTGGCT GGAAACGCACATCCCGCTGCCTGAACATG ] [+] EMBL AY187041 [ ggTGCTGGGCTTTCAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACGTGCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACACGACAGTGCGCGTGCAGTGTCTTTAGGCTACAAAGTGAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTCAACC GTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTC GTCCTCAACCAACACACC GATGTCTGCTGC GTGCTGGAATGTCTGGAGCACC GTCCCGCAGTTGGTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGCTTCGAAAC GAAACCGGAGTTCATCAAGACATGCC GGTTCGATCAGCCAGACTTTGTCGACTGTTCCACCGAGTCC GTCCAGGGACTG TTTGACAAGCTCGTTACC GGCATCGAAGGGCTCGAGCATGTCGGCACGATCGACCCGATGAAGATCA GCAAAATAAGGATCCTGCAA GGTGACGGA CCGGTCAGTGTCAACGCGTCACTTTCCAAGGTGGTGGTCACCGGTTTCGCCAGCACCAAAGTCCTCCGCAATGTCG TCAG CAG TAAGAAC TTTGGCTGGGAAACGCACATCCGTCTGCC GAAGATGCGGCTCGAGGGCAACTATCACATGCAGGGCCGCATACTGGTGATACCGCTGAACGGGCACGGCAAGTGCTGGTTTGAGCCGAGCGGCATGGACATCATTATGCGCACCAGCACCGACCTGTACCAGAAGAATGGGCACGTGTTCTACAACGTGACCGGCACGAAGGTGGACTACACCATCTCCGGCCTGCGCCTGCACATGGGCAACCTGTTCGAGGGCGTGAAGGTGCTGGAGGACAGCACCAACCAGTACCTGAACGACAACTGGCGCCCGGTTTCGGAAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGAACATCTTCCACCAGCTGCCGGCCGACTACTTTGTGGCGGATCTGCCGCGGAGCGGCGGCTCGTAGGGGATCGGACGCGGCCCGGTTGCTACCGCCTGTACATACAGCAATGGTGACACAGAAAATTGTACTTGTAGGCGTTTAGGGGCAGGATTGAACAAAATAGTTGTATTAAATGTTAGCTAAACGCGACCGTACAAAAAAAAAAA] [+] EMBL BX618105 [ TGGTTTGAGCCGAGCGGCATGGACATCATTATGCGCACCAGCACCGACCTGTACCAAAAGAATGGGCACGTGTTCTACAACGTGACCGGCACGAAGGTGGACTACACCATCTCCGGCCTGCGCCTGCACATGGGCAACCTGTTCGAGGGCGTGAAGGTGCTGGAGGACAGCACCAACCAGTACCTGAACGACAACTGGCGCCCGGTTTCGGAAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGAACATCTTCCACCAGCTGCCGGCCGACTATTTTGTGGCGGATCTGCCGCGAAGCGGCGGCTCGTAGGGGATCGGACGCGGCCCGGTTGCTACCGCCTGTACATACAGCAATGGTGACGCAGAAAATTGTACTTGTAGGCTTTTAGGGGCAGGATTGAACAAAATAGTTGTATTAAATGTTAGCTAA ] consensusID : consensus_8981#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 678 fasta sequence [CCGCGGACGCGTGGGCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGTGCTGGACACCGGTTCGCCCATCCGTATCCCGGTCGGGGCGGAGACGCTCGGTCGCATCATTAACGTGATCGGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCTACTCCGTGTTTGC] [+] EMBL BM641167 [CCGCGGACGCGTGGGCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGTGCTGGACACCGGTTCGCCCATCCGTATCCCGGTCGGGGCGGAGACGCTCGGTCGCATCATTAACGTGATCGGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCTACTCCGTGTTTGC] [+] EMBL BM599779 [CCGCGGACGCGTGGG TCCGGGCGAAAGGGTGTGAAATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGTGCTGGACACCGGTTCGCCCATCCGTATCCCGGTCGGGGCGGAGACGCTCGGTCGCATCATTAACGTGATCGGCGAGCCGATCGATGAGCGCGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTCGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCTACTCCGTGTT ] consensusID : consensus_8981#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 571 fasta sequence [CCGCGGACGCGTGGGCGCTCGTACTGTGAAGATGGCTGGAGTAAACCGTAAGCATCATCTACTAGCAACGATTGCCCTGCTATGGCTGGTGGCCGCCAACTGCCTGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGGGCAGCTCGAAGCGTTCCTCGCGCCGACCGAAGGGCGTCAATATTGAGATCTACCATCCGAAGGGTGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGCATCGAGATTTTCATCAACAAGGCAAACCAACCGTCGTCGTCGGGCGACTCGAGTGAGGAAGAGTCCACACCGCCGGTGTGTGATATCTGTCTCAACACGACCGAAGTGTCGTACGGCAAGTTTATACTGCGCAGCGAGGACGCCGTGATCCGCAGCCGGGACCACGTATACTACAATGCGATCGTGAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGATCGAACGATTTCTACGTGTCAGGTAAGTGAAAAGAAATGTGCCATCTTGAAGGGGAGAGTCCTTCTAACGCGCCATTTTGCTCTCATCCCACAATAGAAAGTCGC] [+] EMBL BM584914 [CCGCGGACGCGTGGGCGCTCGTACTGTGAAGATGGCTGGAGTAAACCGTAAGCATCATCTACTAGCAACGATTGCCCTGCTATGGCTGGTGGCCGCCAACTGCCTGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGGGCAGCTCGAAGCGTTCCTCGCGCCGACCGAAGGGCGTCAATATTGAGATCTACCATCCGAAGGGTGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGCATCGAGATTTTCATCAACAAGGCAAACCAACCGTCGTCGTCGGGCGACTCGAGTGAGGAAGAGTCCACACCGCCGGTGTGTGATATCTGTCTCAACACGACCGAAGTGTCGTACGGCAAGTTTATACTGCGCAGCGAGGACGCCGTGATCCGCAGCCGGGACCACGTATACTACAATGCGATCGTGAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGATCGAACGATTTCTACGTGTCAGGTAAGTGAAAAGAAATGTGCCATCTTGAAGGGGAGAGTCCTTCTAACGCGCCATTTTGCTCTCATCCCACAATAGAAAGTCGC] [+] EMBL BX604458 [ TAAGCATCATCTACTAGCAACGATTACCCTGCTATGGCTGGTGGCCGCCAGCTGCCTGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGGGCAGCTCGAAGCGTTCCTCGCGCCGACCCAAGGGCGTCAATATTGAGATCTACCATCCGAAGGGTGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGCATCGAGATTTTCATCAACAAGGCAAACCAACCGTCGTCGTCGGGTGACTCGAGTGAGGAAGAGTCCACACCGCCGGTGTGTGATATCTGTCTCAACACGACCGAAGTGTCGTACGGCAAGTTTATACTGCGCAGCGAGGACGCCGTGATCCGCAGCCGGGACCACGTGTACTACAATGCGATCGTGAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGATCGAACGATTTCTACGTGTCAGGTAAGTGAGAAGAAATGTGCCATCTTGAAGGGGAGAGTCGTTCTAACGCGCCATTTTGCTCTCATtc ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8981#1 --------------------------------AGAATCGCCCGAGGTTNTGCTGGGCTTT 28 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 CCGCCCACGCGTCCGGCACTTTGTTATGCTTCGGGGGGTTGTTTCGTTCGCCTGATTCCG 60 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 CAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACG-T 87 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 AGGACACCTTTTCTTGTCGCATTTGCTTGTGCAGTGTTGGTGTACTGCGTGTATTACGAC 120 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 GCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACAC---GACAGTGCACGTGCAGTGT 144 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 GCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAG 180 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 CTTTAGGCTACAAAGT-GAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTC 203 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 CAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCG 240 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 AACCTGTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTCTGTCCTCA 263 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 TAAATCATCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCA 300 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 ACCAACACACCTGATGTCTGCTGCTGTGCTGGAATGTCTGGAGCACCTGTCCCGCAGTTG 323 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 TCCCCTGCCCCCGGAGAGCGTTGTT-TAGAACAACGGCAAAAACATCTGTTTCGCGGAGG 359 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 GTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGC 383 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 ACGAACCCATACCGGTGGCCGGAGCAGT--GCAACCGTTCGAACCGTGGAAAGGCACGGA 417 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 TTCGAAACTGAAACCGGAGTTCATCAAGACATGCCTGGTTCGATCAGCCAGACTTTGTCG 443 consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 ACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACTCACGCGCGGTATAAAGCACG 477 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 ACTGTT-CCACCGAGTCCTGTCCAGGGACTGTTTTGACAAGCTCGTTACCTGGCATCGAA 502 consensus_8981#2 --------------------------------------------------------CCGC 4 consensus_8981#0 ACCGCTGCCACGATGAGCCGGTTATTCGGTAGTAGTAGTGGTTCGGTGCTCGGCACGGCC 537 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 GGGCTCGAG--CATGTCGGCACG---ATCGACCCGATGAAGATCACGCAAAATAAGGATC 557 consensus_8981#2 GGACGCGTG--GGCATAAATCCG---GGCGAAAGGGTGTGACATTCGAGAAAAGAGATGT 59 consensus_8981#0 GGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTG 597 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 CTGCAA----CGGTGACGGACCCGGTCAGTGTCA-ACGCGTC-------ACTTTCCAAGG 605 consensus_8981#2 TTTCCT----CGATGAAAA---CGCTCA-TGTC---CGCGGC-------GA---CCAGGC 98 consensus_8981#0 TTGCTTGATACGGAGAAGATCTACGAAAACATCTTGCGCGATCTGTTGAAATCGTACAAC 657 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 TGGTGGTCACCGGATTCGCCAGAC-CAAAGTCCTCCGC-AATGTCGCTCAGC----CAGC 659 consensus_8981#2 CGATCTTGGCCCGGTCGTACGCGG-CAAAGGCGGCGGTGAATGCCG--CGGC----CGGA 151 consensus_8981#0 TCGCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGC 717 consensus_8981#3 ----------------CCGCGGACGCGTGGGCGCTCGT-ACTGTGA-----------AGA 32 * * * * * consensus_8981#1 TAAGAACTTTTGG-----CTGGAAACGCACATCCCGCTGCC-TGAACATGCGGCTCGA-- 711 consensus_8981#2 GCGCAGGGTAAGG-----TAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGAC- 205 consensus_8981#0 TCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGA-TGAGTTTCTGGCGCGATT 776 consensus_8981#3 TGGCTGGAGTAAA-----CCGTAAGCATCATCTAC-TAGCAACGATTGCCCTGCTATGGC 86 * * * * consensus_8981#1 GGGCAACTATCACATGCAGGGCCGCATACTGGTGATACCGCTGAACGG-GCA---CGGCA 767 consensus_8981#2 GAGCAGCTGCCCCCGATTCTGA-ACGCGCTGGAGGTGCAGGGCCGCAGCGCC---CGGCT 261 consensus_8981#0 CCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCT 836 consensus_8981#3 TGGTGGCCGCCAACTGCC-TGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGG--GCAGCT 143 * * * * * * * * ** consensus_8981#1 -AGTGCTGGTTTGAGCCGAGCGGCATGG--ACATCATTATGCGC-ACCAGCACCGACCTG 823 consensus_8981#2 -GGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGC-ACCATCGCCA---TG 316 consensus_8981#0 -GGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCC-ACCAGCTCGGGAGCG 894 consensus_8981#3 CGAAGCGTTCCTCGCGCCGACCGAAGGGCGTCAATATTGAGATCTACCA--TCCGAAGGG 201 ** * * * * * **** * * consensus_8981#1 TACCAGAAGAATGGGCACGTGTTCTACAA-CGTG-ACCGGCACGAA--GGTGGACTACAC 879 consensus_8981#2 GACGGTACGGAGGGTCTGGTG---------CGTG-GGCAGCGCGT---GCTGGACA---- 359 consensus_8981#0 GATTCGGTCGAGGTGAAGACAAAGAACCACCGCG-AGCTGTTCGAGCTGTTCGGGCACAA 953 consensus_8981#3 TGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGC--ATCGAGATTTTC 259 * * * * * ** consensus_8981#1 CATCTCCGGCCTGCGCCTGCA-CATGGGCAACCTGTTCGAG--GGCGTGAAGGTGC-TGG 935 consensus_8981#2 -----CCGGTTCGCCCATCCG-TATCC-CGGTCGGGGCGGA--GACGCTCGGTCGCATCA 410 consensus_8981#0 GGTGATGGGTTCGTCCGATCC-CGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCC 1012 consensus_8981#3 ATCAACAAGGCAAACCAACCGTCGTCGTCGGGCGACTCGAG------TGAGGAAGAGTCC 313 * * * * consensus_8981#1 AGGACAGCACCAACCAGTACCTGAACGA---------CAACTGGCGCCCGGTTT---CGG 983 consensus_8981#2 TTAACGTGATCGGCGAG---CCGATCGA---------TGAGCGTGGCCCGATCGACACGA 458 consensus_8981#0 TGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGG 1072 consensus_8981#3 ACACCGCCGGTGTGTGATATCTGTCTCAACA------CGACCGAAGTGTCGTAC-----G 362 * * * * * * consensus_8981#1 AAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGA 1043 consensus_8981#2 ACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGG 518 consensus_8981#0 ATGCGCCGAA--CGGT-GTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGC 1129 consensus_8981#3 GCAAGTTTATACTG--CGCAGCGAGGACG-CCGTGATCCGCAGCCGGGACCACGTATACT 419 * * * ** * * * * * * consensus_8981#1 A-CATCTTCCACCAGCTGCCGGCCGAC--TACTTTGTGGCGGATCTGCCGCGGAGCGGCG 1100 consensus_8981#2 A-GATC---------CTGGTGACGGGC--ATCAAGGTGGTGGACCTGCT--GGCCCCGTA 564 consensus_8981#0 CCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCT--GAAATCACT 1187 consensus_8981#3 ACAATGCGATCGT-GAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGAT--CGAACGATT 476 ** * * * * * * consensus_8981#1 GCTCGTAGGGGATCGGACGCGGCCCG-GTTGCTACCGCCTGTA-CATACAGCAATGGTGA 1158 consensus_8981#2 -CGCGAAGGGCGGCAAGATCGGCCTG-TTCGGTGGTGCC----------GGCGTTGGCAA 612 consensus_8981#0 CGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGG 1247 consensus_8981#3 TCTACGTGTCAGGTAAGTGAAAAGAAATGTGCCATCTTGAAGG--GGAGAGTCCTTCTAA 534 * * consensus_8981#1 CACAGA-----AAATTGTACTTGTAGGCGTTTAGGGGCAGGATTGAACAAAATAGTTG-T 1212 consensus_8981#2 GACCGT-----A--CTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCT 665 consensus_8981#0 GACGCTTTTG-ACGACTATCCTGGAGCCGGCCATTAC--TCCCCGAAAAAAAAAAATGCT 1304 consensus_8981#3 CGCGCCATTTTGCTCTCATCCCACAATAGAAAGTCGC----------------------- 571 * * * * consensus_8981#1 ATTAAATGTTAGCTAAACGCGACCGTACAAAAAAAAAAA--------------------- 1251 consensus_8981#2 ACTCCGTGTTTGC----------------------------------------------- 678 consensus_8981#0 TACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTTGGTGTGTG 1364 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 ------------------------------------------------------------ consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 CGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAA 1424 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 ------------------------------------------------------------ consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 ATTTTGATGAAGCGTGCGCACGCCACGTTTCGTTTGCGTAGAACGCACAAGCGTCCACCC 1484 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 ------------------------------------------------------------ consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 CGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTC 1544 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 ------------------------------------------------------------ consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 GGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGA 1604 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 ------------------------------------------------------------ consensus_8981#2 ------------------------------------------------------------ consensus_8981#0 TTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAATGTGCTAATTG 1664 consensus_8981#3 ------------------------------------------------------------ consensus_8981#1 - consensus_8981#2 - consensus_8981#0 T 1665 consensus_8981#3 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||