These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9009#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 967 fasta sequence [CCGCCCACGCGTCCGCGCAACGCATTTATCTTCATTTCCCTGCCCAGTGGTCATTTAAGAAAGTAAAACACGTTTTTTGGTTCCGTCTAGTAAAAGTGGAACCATCCTTCGCCCGTCGCTCGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTTCCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGCGGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCCGGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGAGGGTTGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGCTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTA-TTTTTAGTGTGC-TTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAAAGAAAAGTGGGTACCAGAAATAACGCACCATTGCCAGAAAACGCCGTTCCTGCTGGTGGGCACGCAGATCGATCTGCGCGACGAAAACAGCACACTGGAGAAGCTGGCTAAGAACAAACAAAAACCCATCACCCTCGAGCAGGGTGAGAAGCTGGCGAAGGAACTGAAGGCGGTGAAGTATGTCGAGTGTTCGGCGTTGACCCAGAAAGGGCTGAAGAACGTGTTCGACGAGGCAATCCTGGCGGCGCTGGAACCCCCAGAGCCGACGAAAAAGAGGAAGTGC] [+] EMBL BM589496 [CCGCCCACGCGTCCGCGCAACGCATTTATCTTCATTTCCCTGCCCAGTGGTCATTTAAGAAAGTAAAACACGTTTTTTGGTTCCGTCTAGTAAAAGTGGAACCATCCTTCGCCCGTCGCTCGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTTCCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGCGGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCCGGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGAGGGTTGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGCTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTATTTTTTAGTGTGCTTTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAA ] [+] EMBL BX615664 [ AAAAGTGGAACCATCCTTCGCCCGTCGCTCGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTTCCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGCGGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCCGGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGAGGGTTGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGCTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTA TTTTTAGTGTGC TTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAAAGAAAAGTGGGTACCAGAAATAACGC ] [+] EMBL BX618497 [ GCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGTTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTA TTTTTAGTGTGC TTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAAAGAAAAGTGGGTACCAGAAATAACGCACCATTGCCAGAAAACGCCGTTCCTGCTGGTGGGCACGCAGATCGATCTGCGCGACGAAAACAGCACACTGGAGAAGCTGGCTAAGAACAAACAAAAACCCATCACCCTCGAGCAGGGTGAGAAGCTGGCGAAGGAACTGAAGGCGGTGAAGTATGTCGAGTGTTCGGCGTTGACCCAGAAAGGGCTGAAGAACGTGTTCGACGAGGCAATCCTGGCGGCGCTGGAACCCCCAGAGCCGACGAAAAAGAGGAAGTGC] consensusID : consensus_9009#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 712 fasta sequence [AGGCAGAATCCCCCGAGGTGTGTGTAAAAAGCATATTGCGTCGTTTTTAAAGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTGCGGTGGCATAGTGCATATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCAAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTACGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGCAACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTAGCGTGGAGGTTAATCGCACAAGGCCTGCTTGGCTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTCGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGCATATTTACTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGAGAAGTTCCCGTACGGTACGCTGGCAGAATCCGCTCANCCAATCCC] [+] EMBL AL931455 [AGGCAGAATCCCCCGAGGTGTGTGTAAAAAGCATATTGCGTCGTTTTTAAAGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTGCGGTGGCATAGTGCATATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCAAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTACGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGCAACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTAGCGTGGAGGTTAATCGCACAAGGCCTGCTTGGCTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTCGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGCATATTTACTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGAGAAGTTCCCGTACGGTACGCTGGCAGAATCCGCTCANCCAATCCC] consensusID : consensus_9009#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence [TTTTCTTTTTGGAAATAGTTTATTCGAAATCGAATAGACAGTCGGAAAAGTTGACAAAGAATGCACCAGTACGAAATAGAGTGAAAAGTTTTAATTACTATTCGGTAGTAAACGAGCGTTCGCACTCGTGTGCTTTGTTCGATTTTGCTTGCGCTACTGGGCGCTAGTCAGGCATTACTGCTCAAAATAAATGAACCTTTTTGCCGGCGTTCACTGCAGCCTCGAAACCGTCACCGATCGCTTCGCCCGCCTTCCGGAAAGCGTTTGCAATGTTGCGCGTGGAAAGGTGTCCGGGTCGATGTGAATATTCCATCCGGCTTCGCCTCCTTCGGGCAGCCGGTCTGGTTGACGATGCTCAGATCGAACGGATCCACCGAGTACGAAGCCAATAGGGTGCGAATCTTGTGGACGTAGATTTTGTCCAAATCGCGCGTGCGGGACAGCAGGGTCGCACTCTGCCGATGGCCGAACGGAATCTTCTGGCACGAAAACACCCCGGCGTACGTTTCGTAGTCCGTCATGAAGATGACAAACTTTGCGGAACCGGCTACGCTGAGTGGAAACCGTACGGTCATTCGGGCTGGTACGTCCCGGTCGGTGACGGTAAGCTTGCCGGTGTACGAGTTCTCGTGCTTTAGGGGGTGCGATCGAGACCGGTGCCTTTGGGGAGATCTGCTCGATAAA] [+] EMBL CNS09I7K [TTTTCTTTTTGGAAATAGTTTATTCGAAATCGAATAGACAGTCGGAAAAGTTGACAAAGAATGCACCAGTACGAAATAGAGTGAAAAGTTTTAATTACTATTCGGTAGTAAACGAGCGTTCGCACTCGTGTGCTTTGTTCGATTTTGCTTGCGCTACTGGGCGCTAGTCAGGCATTACTGCTCAAAATAAATGAACCTTTTTGCCGGCGTTCACTGCAGCCTCGAAACCGTCACCGATCGCTTCGCCCGCCTTCCGGAAAGCGTTTGCAATGTTGCGCGTGGAAAGGTGTCCGGGTCGATGTGAATATTCCATCCGGCTTCGCCTCCTTCGGGCAGCCGGTCTGGTTGACGATGCTCAGATCGAACGGATCCACCGAGTACGAAGCCAATAGGGTGCGAATCTTGTGGACGTAGATTTTGTCCAAATCGCGCGTGCGGGACAGCAGGGTCGCACTCTGCCGATGGCCGAACGGAATCTTCTGGCACGAAAACACCCCGGCGTACGTTTCGTAGTCCGTCATGAAGATGACAAACTTTGCGGAACCGGCTACGCTGAGTGGAAACCGTACGGTCATTCGGGCTGGTACGTCCCGGTCGGTGACGGTAAGCTTGCCGGTGTACGAGTTCTCGTGCTTTAGGGGGTGCGATCGAGACCGGTGCCTTTGGGGAGATCTGCTCGATAAA] consensusID : consensus_9009#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 658 fasta sequence [TTGTTTTGACAGCTGCCTGGTGAGGAAAATATTCCGTCGCGGCTCCGGTGGACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGTGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT-GAAGGACCC-GT-GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAGATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAAC------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCTGCC] [+] EMBL CNS08LR7 [TTGTTTTGACAGCTGCCTGGTGAGGAAAATATTCCGTCGCGGCTCCGGTGGACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGAGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAA TGGAACGCGCTCTGGCCCGCCGGGGCCTGGAAGGACCCGGTGGGCTACGA ] [+] EMBL CNS08X9D [ GGCTCCGGTGGACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGTGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT GAAGGACCC GT GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAGATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCC ] [+] EMBL CNS08QFP [ GACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGTGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT GAAGGACCC GT GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAGATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAACAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCC] [+] EMBL CNS08DPN [ GGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT GAAGGACCC GT GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAAATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTTTCCGAGCggg ] consensusID : consensus_9009#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence [CCGCCCACGCGTCCGGAAGAACGTGATGCGCGATCTGCGTATCCGCAAGCTCTGCCTGAACATTTGCGTCGGCGAGTCCGGTGATAGGCTGACACGTGCCGCCAAGGTGCTGGAACAGCTGACCAACCAGACGCCCGTCTACTCGAAGGCCCGCTACACCGTGCGCTCGTTCGGCATCCGTCGTAACGAAAAGATTGCCGTCCACTGCACGGTGCGCGGTGCCAAGGCGGAGGAGATCCTCGAGCGTGGCCTGAAGGTGCGCGAGTACGAGCTGCGTCGCGACAACTTCTCGCAGACCGGCAACTTCGGCTTCGGCATCCAGGAACACATCGATCTGGGCATCAAGTACGATCCGACGATCGGTATCTACGGTTTGGACTTCTACGTTGTGCTTGGCCGTCCAGGATACAACGTTGCCCAGCGACGACGCAAGATGGGCAAGATCGGCTTCATCCACCGTCTGACCAAGGAGGACGCGATGAAGTGGTTCCAGCAGAAGTACGACGGTGTCATCCTGAACAGCAAGGCGAAGTAAGAGCCCGGATACGCTCTTCCTTATGCACGTTTATGTGTGTTGCGAGTGCTTCTAAAGTTTGGGTAAGACAGGTGTGCCGCGGAGGAGGCGGAGGAAGGACCGGAGCAGGTGGGCGCGTTG] [+] EMBL BM580670 [CCGCCCACGCGTCCGGAAGAACGTGATGCGCGATCTGCGTATCCGCAAGCTCTGCCTGAACATTTGCGTCGGCGAGTCCGGTGATAGGCTGACACGTGCCGCCAAGGTGCTGGAACAGCTGACCAACCAGACGCCCGTCTACTCGAAGGCCCGCTACACCGTGCGCTCGTTCGGCATCCGTCGTAACGAAAAGATTGCCGTCCACTGCACGGTGCGCGGTGCCAAGGCGGAGGAGATCCTCGAGCGTGGCCTGAAGGTGCGCGAGTACGAGCTGCGTCGCGACAACTTCTCGCAGACCGGCAACTTCGGCTTCGGCATCCAGGAACACATCGATCTGGGCATCAAGTACGATCCGACGATCGGTATCTACGGTTTGGACTTCTACGTTGTGCTTGGCCGTCCAGGATACAACGTTGCCCAGCGACGACGCAAGATGGGCAAGATCGGCTTCATCCACCGTCTGACCAAGGAGGACGCGATGAAGTGGTTCCAGCAGAAGTACGACGGTGTCATCCTGAACAGCAAGGCGAAGTAAGAGCCCGGATACGCTCTTCCTTATGCACGTTTATGTGTGTTGCGAGTGCTTCTAAAGTTTGGGTAAGACAGGTGTGCCGCGGAGGAGGCGGAGGAAGGACCGGAGCAGGTGGGCGCGTTG] consensusID : consensus_9009#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence [CCGCCCACGCGTCCGCCTGCATCGAGCATAGAAAAGGGCAGACTACTGACTAAACAATAGCGTTATTTATAATGGTGTGAGCAGCGACGGTTGCGCGCTTTGGCGGGATGCGTTTTTTCGCACCGCTTTCCGCGCTCGGGCAGCAGCAACCCGGTAGAGAACAATCGAGGACACTAAACGAAAGGCGAAGAGGATATTTTGAGACATACTTTTTTTTATAAATTACCGTCAGCATTTAACTTTACGACTAGGCGCGACATTTCCAAACACGATGCGGATGAGAGCCTCACGGTGTAACGAATCGTCTACAATCATTTACAAGTGTGTGAAGAAAAAGACTAAACAATACTCGCCCGCGCCCCTCCCAACGTGTACGCAGTTCCGTTATGTTATCAACTTTTCGTTGGGCGGTAGCACGGTAGAAAGCGCACGTGGACAGAACATCAGCCCGAACGTGTGTGCGCAAAGGAACGTACCAGAATTGGCATCATGACTTCTTTGGAAGGTGGAGAAAAACCAACACGATTATCTTCTGTGTGCTGCAAGATTGAACAACTTCCTTGCAAAAAATAATAACAACTTCAAGCATGAAAACTTAACATCAAATAAAGAAGAAAACATCAATCGTATCAACTG] [+] EMBL BM608711 [CCGCCCACGCGTCCGCCTGCATCGAGCATAGAAAAGGGCAGACTACTGACTAAACAATAGCGTTATTTATAATGGTGTGAGCAGCGACGGTTGCGCGCTTTGGCGGGATGCGTTTTTTCGCACCGCTTTCCGCGCTCGGGCAGCAGCAACCCGGTAGAGAACAATCGAGGACACTAAACGAAAGGCGAAGAGGATATTTTGAGACATACTTTTTTTTATAAATTACCGTCAGCATTTAACTTTACGACTAGGCGCGACATTTCCAAACACGATGCGGATGAGAGCCTCACGGTGTAACGAATCGTCTACAATCATTTACAAGTGTGTGAAGAAAAAGACTAAACAATACTCGCCCGCGCCCCTCCCAACGTGTACGCAGTTCCGTTATGTTATCAACTTTTCGTTGGGCGGTAGCACGGTAGAAAGCGCACGTGGACAGAACATCAGCCCGAACGTGTGTGCGCAAAGGAACGTACCAGAATTGGCATCATGACTTCTTTGGAAGGTGGAGAAAAACCAACACGATTATCTTCTGTGTGCTGCAAGATTGAACAACTTCCTTGCAAAAAATAATAACAACTTCAAGCATGAAAACTTAACATCAAATAAAGAAGAAAACATCAATCGTATCAACTG] consensusID : consensus_9009#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 587 fasta sequence [CCGGTCAACACCAAATAGACAACAAATTTGATTCATCGATTAATTCCCTGCCGGAGAAACTGTGCCGAGAAGTTCCCGAGAAGAAAACCAGCAACTCCCTTGGGAATGCAGAATCCCCAACTGGGGGTGCTATGGTTACAATCCTCCCTCGAAGAACACGCACATGAGTAACGTGCAGCAATTAATCGATCAATCGAAGAGCAACTTAAATCGAAAAATGTTAAAAACGAACCAAAAAAAAAAAATATCATAACCATACACAAGAACCAAGCCCAAAAACCCAAGCAAACACCAGAAGTGAACGAAATCGACGATAATCTAGTGCAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGTTTGGCTATGGTGAAAACCGGCCACATCCGAACCGCTGGCGACAGCAGCCTTAGAGTGTAAGACGTTTTATGTTTCTGTTTTGTTTTTCGTGGTGAGACAACAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAACGATTTAGGCAAATGAAAGCTAGAAGCAACAAAGACGCGCGCAGAGGAAGAAAAAAACAGACGAGAAGATTAAAACAAAACCACACGAGCAAT] [+] EMBL BM624465 [CCGGTCAACACCAAATAGACAACAAATTTGATTCATCGATTAATTCCCTGCCGGAGAAACTGTGCCGAGAAGTTCCCGAGAAGAAAACCAGCAACTCCCTTGGGAATGCAGAATCCCCAACTGGGGGTGCTATGGTTACAATCCTCCCTCGAAGAACACGCACATGAGTAACGTGCAGCAATTAATCGATCAATCGAAGAGCAACTTAAATCGAAAAATGTTAAAAACGAACCAAAAAAAAAAAATATCATAACCATACACAAGAACCAAGCCCAAAAACCCAAGCAAACACCAGAAGTGAACGAAATCGACGATAATCTAGTGCAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGTTTGGCTATGGTGAAAACCGGCCACATCCGAACCGCTGGCGACAGCAGCCTTAGAGTGTAAGACGTTTTATGTTTCTGTTTTGTTTTTCGTGGTGAGACAACAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAACGATTTAGGCAAATGAAAGCTAGAAGCAACAAAGACGCGCGCAGAGGAAGAAAAAAACAGACGAGAAGATTAAAACAAAACCACACGAGCAAT] consensusID : consensus_9009#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 469 fasta sequence [GGCAGAATCCGACGAGGTTAGGAATCGGCCTNATCACGATCGCTCAGCGCTGCGGGTGCACCGAAGGCAGGTGGCCGCCGTGGCCGGTGGACTCCGTGGATTCGGAGTNGCTCGTTGCGCTTAAGGATCTGCTGAACCGGTTGGGCTCCGAGACGCTCTGCACGGAGCAAAAGTTCCCGACGGACGGGTCGGGCACGGATTTGCGCTCAAAGCTATCTGCTGAACTCGTCGATCGCTGCTTGCGAGGAGGCAGATCTCGTGCTGCTCGTCGGCACGAATCCGCGCTATGAGGCGCCGCTGCTGAAACACCCGCCTCAGGAAGGGATACATCCATAACGATCAAAACATTGCTCTGATTGGGCCGAAAGTTAACCTTTCGTTACGACCTATTAGCATCTTGGTAAGCGATACTCGCTGATCCCGGAATATCCCAAATGGAACACCAATCCCGTTCGGCGAAGAAACTTGA] [+] EMBL BX469047 [GGCAGAATCCGACGAGGTTAGGAATCGGCCTNATCACGATCGCTCAGCGCTGCGGGTGCACCGAAGGCAGGTGGCCGCCGTGGCCGGTGGACTCCGTGGATTCGGAGTNGCTCGTTGCGCTTAAGGATCTGCTGAACCGGTTGGGCTCCGAGACGCTCTGCACGGAGCAAAAGTTCCCGACGGACGGGTCGGGCACGGATTTGCGCTCAAAGCTATCTGCTGAACTCGTCGATCGCTGCTTGCGAGGAGGCAGATCTCGTGCTGCTCGTCGGCACGAATCCGCGCTATGAGGCGCCGCTGCTGAAACACCCGCCTCAGGAAGGGATACATCCATAACGATCAAAACATTGCTCTGATTGGGCCGAAAGTTAACCTTTCGTTACGACCTATTAGCATCTTGGTAAGCGATACTCGCTGATCCCGGAATATCCCAAATGGAACACCAATCCCGTTCGGCGAAGAAACTTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9009#3 ------------------------------------------------------------ consensus_9009#7 ------------------------------------------------------------ consensus_9009#2 ------------------------------------------------------------ consensus_9009#6 ------------------------------------------------------------ consensus_9009#4 ------------------------------------------------------------ consensus_9009#0 CCGCCCACGCGTCCGCGCAACGCATTTATCTTCATTTCCCTGCCCAGTGGTCATTTAAGA 60 consensus_9009#5 ------------------------------------------------------------ consensus_9009#1 ------------------------------------------------------------ consensus_9009#3 ------------------------------------------------------------ consensus_9009#7 ------------------------------------------------------------ consensus_9009#2 ------------------------------------------------------------ consensus_9009#6 ------------------------------------------------------------ consensus_9009#4 ------------------------------------------------------------ consensus_9009#0 AAGTAAAACACGTTTTTTGGTTCCGTCTAGTAAAAGTGGAACCATCCTTCGCCCGTCGCT 120 consensus_9009#5 ------------------------------------------------------------ consensus_9009#1 ------------------------------------------------------------ consensus_9009#3 ------------------------------------------------------------ consensus_9009#7 ------------------------------------------------------------ consensus_9009#2 ------------------------------------------------------------ consensus_9009#6 ------------------------------------------------------------ consensus_9009#4 ------------------------------------------------------------ consensus_9009#0 CGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTT 180 consensus_9009#5 ------------------------------------------------------------ consensus_9009#1 ------------------------------------------------------------ consensus_9009#3 ------------------------------------------------------------ consensus_9009#7 ------------------------------------------------------------ consensus_9009#2 -----------------------------TTTTCTTTTTGGAAATAGTTTATTCGAAATC 31 consensus_9009#6 ------------------------------------------------------------ consensus_9009#4 ------------------------------------------------------------ consensus_9009#0 CCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGC 240 consensus_9009#5 ------------------------------------------------------------ consensus_9009#1 -------------------------------------------------AGGCAGAATCC 11 consensus_9009#3 --TTGTTTTGACAGCTGCCTGGTGAGGAAAATATTCCGTCGCGGCTCCGGTGGACATCGC 58 consensus_9009#7 ------------------------------------------------------------ consensus_9009#2 GAATAGACAGTCGGAAAAGTTGACAAAGAATGCACCAGTACGAAATAGAGTGAAAAGTTT 91 consensus_9009#6 -------------------------------------------------CCGGTCAACAC 11 consensus_9009#4 --------CCGCCCACGCGTCCGGAAGAACGTGATGCGCGATCTGCGTATCCGCAAGCTC 52 consensus_9009#0 GGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCC 300 consensus_9009#5 --------------CCGCCCACGCGTCCGCCTGCATCGAGCATAGAAAAGGGCAGACTAC 46 consensus_9009#1 CCCGAGGTGTGTGTAAAAAGCATATTGCGTCGTTTTTAAAGGTTTCCCATCTACGACCCA 71 consensus_9009#3 AAAACTCTTCACATCTCTGAACAAAC-TTTGTCCGACTGATTGCTTTCCTGCCGATTCCG 117 consensus_9009#7 -------------------------------------------------------GGCAG 5 consensus_9009#2 TAATTACTATTCGGTAGTAAACGAGC-GTTCGCACTCGTGTGCTTTGTTCGATTTTGCTT 150 consensus_9009#6 CAAATAGACAACAAATTTGATTCATC-GATTAATTCCCTGCCGGAGAAACTGTGCCGAGA 70 consensus_9009#4 TGCCTGAACATTTGCGTCGGCGAGTCCGGTGATAGGCTGACACGTGCCGCCAAGGTGCTG 112 consensus_9009#0 GGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGA 360 consensus_9009#5 TGACTAAACAATAGCGTTATTTATAATGGTGTGAGCAGCGACGGTTGCGCGCTTTGGCGG 106 consensus_9009#1 CAAACAAACGAAAAACATAATTATGC-GTGCGGTGGCATAGTGCATATGTTTTGGGAAAA 130 consensus_9009#3 GATCTATCTGGAACAA--ACGATGGGCCA-CGGTCACGGACACGGACCGCC--GTACAAG 172 consensus_9009#7 AATCCGAC-GAGGTTA--GGAATCGGCC--TNATCACGATCGCTCAGCGCT--GCG-GGT 57 consensus_9009#2 GCGCTACTGGGCGCTA--GTCAGGCATTACTGCTCAAAATAAATGAACCTT--TTTGCCG 206 consensus_9009#6 AGTTCCCGAGAAGAAA--ACCAGCAACT--CCCTTGGGAATGCAGAATCCCCAACTGGGG 126 consensus_9009#4 GAACAGCT---GACCA--ACCAGACGCCCGTCTACTCGAAGGCCCGCTACACCGTG-CGC 166 consensus_9009#0 GGGTTGCAGCAGTAGC--AGCAGCAGCAG-CAGCAGCAGCAGCAGAATGCAAACAATAAA 417 consensus_9009#5 GATGCGTT----TTTT--CGCACCGCTTTCCGCGCTCGGGCAGCAGCAACCCGGTAGAGA 160 consensus_9009#1 GTTTCATCCAATGACAGCAGCAAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTACGAGAGA 190 * consensus_9009#3 GTGC----CGGATGCATCCATCTACAA-AGTGGCCGACGCGCCC-GAGCT--GGTC---G 221 consensus_9009#7 GCAC----CGAAGGCAGGTGGCCGCC---GTGGCCGGTGGACTC-CGTGG--ATTC---G 104 consensus_9009#2 GCGT----TCACTGCAGCC-TCGAAAC-CGTCACCGATCGCTTC-GCCCG--CCTTCCGG 257 consensus_9009#6 GTGC----TATGGTTACAATCCTCCCT-CGAAGAACACGCACAT-GAGTA--ACGTGCAG 178 consensus_9009#4 TCGT----TCGGCATCCGTCGTAACGA-AAAGATTGCCGTCCACTGCACG--GTGCGCGG 219 consensus_9009#0 GTGCG---TGGTCGTTGGTGACGGTGC-GGTCGGTAAGACCTGCCTGCTC--ATTTCC-- 469 consensus_9009#5 ACAAT---CGAGGACACTAAACGAAAGGCGAAGAGGATATTTTGAGACAT--ACTTTTTT 215 consensus_9009#1 TTGAACATCAATTTTGTTTACCAACAAAATACGCAACCGAACGGTGGTCGTAGAGTTTGT 250 consensus_9009#3 AAGTGGAACGCGCTCTGGCCCGCCGGGGCCTG-AAGGACCCGT--GGCTACGAAATGAAG 278 consensus_9009#7 GAGTNGCTCG-----TTGCGCTTAAGGATCTG-CTGAACCGGTTGGGCTCCGAGACG--- 155 consensus_9009#2 AAAGCGTTTGCAATGTTGCGCGTGGAAAGGTGTCCGGGTCGATGTGAATATTCCATCCGG 317 consensus_9009#6 CAATTAATCG------ATCAATCGAAGAGCAACTTAAATCGAA--AAATGTTAAAAA--- 227 consensus_9009#4 TGCCAAGGCGGA--GGAGATCCTCGAGCGTGGCCTGAAGGTGCGCGAGTACGAGCTGCGT 277 consensus_9009#0 TACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGC---- 525 consensus_9009#5 TTATAAATTA-----CCGTCAGCATTTAACTTTACGACTAGGCGCGACATTTCCAAA--- 267 consensus_9009#1 GTGTTGTCCATCTTTGTGGTAGTGAAAGTGTG-CTAGCAAAGTGTAGATGGCAGAAGCCA 309 consensus_9009#3 TGTGGCGCTACAATGTG-AAGCAGTTTTCGACCCACCGTTCGCGGCTCATC--ACGTTCC 335 consensus_9009#7 -----CTCTGCACGGAG-CAAAAGTTCCCGACGGACGGGTCG-GGCACG-----GATTTG 203 consensus_9009#2 CTTCGC-CTCCTTCGGG-CAGCCGGTCT-GGTTGACGATGCTCAGATCGA---ACGGATC 371 consensus_9009#6 -----CGAACCAAAAAA-AAAAAATATCATAACCAT-ACACAAGAACCAA---GCCCAAA 277 consensus_9009#4 -----CGCGACAACTTC-TCGCAGACCGGCAACTTCGGCTTCGGCATCCA----GGAACA 327 consensus_9009#0 -----CGTCACGGTCAT-GATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGC 579 consensus_9009#5 --------CACGATGCG-GATGAGAGCC----TCACGGTGTAACGAATCGTCTACAATCA 314 consensus_9009#1 TTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAA 369 consensus_9009#3 TGTTCAA-GGGATTCCCGCTCGGATTTG-CTG--CCTTCGTTGCGACGATCGG---CGTC 388 consensus_9009#7 CGCTCAA-AGC-TATCTGCT-GAACTCG-TCGATCGCTGCTTGCGAGGAGGCA---GATC 256 consensus_9009#2 CACCGAG-TACGAAGCCAATAGGGTGCG-AA---TCTTGTGGACGTAGATTTT---GTCC 423 consensus_9009#6 AACCCAA-GCAAACACCAGAAGTGAACG-AA-------ATCGACGATAATCTA---GTGC 325 consensus_9009#4 CATCGATCTGGGCATCAAGTACGATCCG-ACGATCGGTATCTACGGTTTGGAC---TTCT 383 consensus_9009#0 TGGCCAG-GAAGATTACGATCGACTACG-ACCACTGTCGTATCCACAGACCGATGTATTT 637 consensus_9009#5 TTTACAAGTGTGTGAAGAAAAAGACTAA-ACAATACTCGCCCGCGCCCCTCCCAACGTGT 373 consensus_9009#1 GCTCTACAAGAATATCCAAAGACATTAGCGTGGAGGTTAATCGCACAAGGCCTGCTTGGC 429 * * consensus_9009#3 GAGTA-TGCGC-TCGGA--GTGGACTACCACGCACATGGT-GGCCATGGTCATGG-GGAT 442 consensus_9009#7 TCGTGCTGCTCGTCGGC--ACGAATCCGCGC-TATGAGGC-GCCGCTGCTGAAAC-ACCC 311 consensus_9009#2 AAATCGCGCGTGCGGGACAGCAGGGTCGCACTCTGCCGAT-GGCCGAACGGAATC-TTCT 481 consensus_9009#6 AGCTCCGGTTCGTACGTGGACGCTTTTCCCC-GGTTTGGC-TATGGTGAAAACCG-GCCA 382 consensus_9009#4 ACGTTGTGCTTGGCCGTCCAGGATACAACGT-TGCCCAGC-GACGACGCAAGATG-GGCA 440 consensus_9009#0 TTAGTGTGCTTTTCCGTC-GTGAGTCCCAGTTCGTTCGAA-AACGTTAAAGAAAA-GTGG 694 consensus_9009#5 ACGCAGTTCCGTTATGTTATCAACTTTTCGT-TGGGCGGT-AGCACGGTAGAAAGCGCAC 431 consensus_9009#1 TTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCC 489 * consensus_9009#3 GAGAAGGGAC-ATGGAAGCG-GTCATCACT-AGTGCGAGA--GAT--TTGACGAGTTAGA 495 consensus_9009#7 GCCTCAGGA--AGGGATACA-TCCATAACG-ATCAAAACATTGCT--CTGATTGGGCCGA 365 consensus_9009#2 GGCACGAAAACACCCCGGCG-TACGTTTCGTAGTCCGTCATGAAG--ATGACAAACTTTG 538 consensus_9009#6 CATCCGAACCGCTGGCGACA-GCAGCCTTAGAGTGTAAGACGTTT--TATGTTTCTGTTT 439 consensus_9009#4 AGATCGGCTTCATCCACCGT-CTGACCAAGGAGGACGCGATGAAG--TGGTTCCAGCAGA 497 consensus_9009#0 GTACCAGAAATAACGCACCA-TTGCCAGAAAACGCCGTTCCTGCTGGTGGGCACGCAGAT 753 consensus_9009#5 GTGGACAGAACATCAGCCCG-AACGTGTGTGCGCAAAGGAACGTACCAGAATTGGCATCA 490 consensus_9009#1 GCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTCGTTAACAAC--AAAACACACGACG 547 consensus_9009#3 CGGCCCCCATCTCCAT-----CCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATT-- 548 consensus_9009#7 AAGTTAACCTTTCGTT-----ACGACCTATTAGCATCTTGGTAA----GCGATACTCG-- 414 consensus_9009#2 CGGAACCGGCTACGCT-----GAGTGGAAACCGTACGGTCATTCGGG-CTGGTACGTC-- 590 consensus_9009#6 TGTTTTTCGTGGTGAG-----ACAACAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAA 494 consensus_9009#4 AGTACGACGGTGTCATCCTGAACAGCAAGGCGAAGTAAGAGCCCGGATACGCTCTTCCTT 557 consensus_9009#0 CGATCTGCGCGACGAAAACAGCACACTGGAGAAGCTGGCTAAGAACAAACAAAAACCCAT 813 consensus_9009#5 TGACTTCTTTGGAAGGT---GGAGAAAAACCAACACGATTATCT----TCTGTGTGCTGC 543 consensus_9009#1 GCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGCATATTTA 607 consensus_9009#3 TTATTTCCAAAATTCTGCCG--CAAAGAATAAACGAACTTATGGTGTAGCAGAAACAAAA 606 consensus_9009#7 CTGATCCCGGAAT---ATCC--CAAATGGAACACCAATCCCGTTCGGCGAAGAAACTTGA 469 consensus_9009#2 CCGGT-CGGTGACGGTAAGC--TTGCCGGTGTACGAGTTCTCGTGCTTTAGGGGGTGCGA 647 consensus_9009#6 CGATTTAGGCAAATGAAAGC--TAGAAGCAACAAAGACGCGCGCAGAGGAAGAAA---AA 549 consensus_9009#4 ATGCACGTTTATGTGTGTTG--CGAGTGCTTCTAAAGTTTGGGTAAGACAGGTGTGCCGC 615 consensus_9009#0 CACCCTCGAGCAGGGTGAGA---AGCTGGCGAAGGAACTGAAGGCGGTGAAGTATGTCGA 870 consensus_9009#5 AAGATTGAACAACTTCCTTG--CAAAAAATAATAACAACTTCAAGCATGAAAACTTAACA 601 consensus_9009#1 CTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGA 667 consensus_9009#3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCTGCC-------- 658 consensus_9009#7 ------------------------------------------------------------ consensus_9009#2 TCGAGACCGGTGCCTTTGGGGAGATCTGCTCGATAAA----------------------- 684 consensus_9009#6 AACAGACGAGAAGATTAAAACAAAACCACACGAGCAAT---------------------- 587 consensus_9009#4 GGAGGAGGCGGAGGAAGGACCGGAGCAGGTGGGCGCGTTG-------------------- 655 consensus_9009#0 GTGTTCGGCGTTGACCCAGAAAGGGCTGAAGAACGTGTTCGACGAGGCAATCCTGGCGGC 930 consensus_9009#5 TCAAATAAAGAAGAAAACATCAATCGTATCAACTG------------------------- 636 consensus_9009#1 GAAGTTCCCGTACGGTACGCTGGCAGAATCCGCTCANCCAATCCC--------------- 712 consensus_9009#3 ------------------------------------- consensus_9009#7 ------------------------------------- consensus_9009#2 ------------------------------------- consensus_9009#6 ------------------------------------- consensus_9009#4 ------------------------------------- consensus_9009#0 GCTGGAACCCCCAGAGCCGACGAAAAAGAGGAAGTGC 967 consensus_9009#5 ------------------------------------- consensus_9009#1 ------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||