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Anopheles gambiae
cluster # 9022 cluster # 9022       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9022#0 length = 1390 sequences # 10  
consensus_9022#1 length = 1159 sequences # 2  
consensus_9022#2 length = 392 sequences # 1  

consensusID : consensus_9022#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1390
fasta sequence
                              [CCGCCTGTATCAACAAAAACATTGATGTCGATTTTTCCTTTGCAAAGAAAAAAGACACGTTAG-TATGACTA-GTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAATTGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACTGAGTCGATATCCTGCTTTTGGTCG-GAGT-TGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAGAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCC-GGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGGACGAAAAGCGTTCCCCATTCATT-G-GCAGTGCGATT-GGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATATGTTGCTAACAGAAAAT-CCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAAT-GGTGATCACTAGCAT-GGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGCGAAAAGGTCTGC-TTGATCCGCCAATTGACATATTTAGAAGATTTTCAAAAGCAAGAAGAGCACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCACAAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCAAAGAACACGTGCTGGAGCGCTCGATATGATGTTGAACTCATTTTCATTGCGGACATTTTGCCGATTGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGGTTTTTTTTTTTTTGTGTCGGGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTTCGAATCGAAACCACACTTTAGGAACACAGTTCCAGCTAGCATTATACTTTTTTCCCAAAATGTTCACATTTGGTGTGGTAAAATAGAAACCTTATTAGTTATATAATTTTTCGTTGGAATACAAGATCGAAGTAAATCAGTTTCCAATAAATTTAAATATCTGAGACAATTGAGTGCAATCACGTATACAAATACATTACCCTTAGTCAACCCT]

[+] EMBL BM591645             [CCGCCTGTATCAACAAAAACATTGATGTCGATTTTTCCTTTGCAAAGAAAAAAGACACGTTAG TATGACTA GTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAATTGCACGGCGTTGTGCATTAAAGGTTACAGCAGACTGAGTCGATATCCTGCTTTTGGTCG GAGT TGATCGTTCGTGGGTAAAACAATGTCACAGTCCAAAGGCAGCACTGAAAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCGCACTGAACCCTACCTGGGCGAAAGGGTACTTCCGGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGGACGAAAAGCGTTCCCCATTCATTGG GCAGTGCGATTGGGCTGTGTGATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM607947             [                                     ccgTGCAAAGAAAAAAGACACGTTAG TATGACTA GTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAATTGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACAGAGTCGATATCCTGCTTTTGGTCG GAGT TGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAGAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCCGGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGGACGAAAAGCGTTCCCCATTCATTGG GCAGTGCGATTGGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX601785             [                                             AGAAAAAAGACACGTTAG TATGACTA GTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAATTGCACGGCGCTGTGCATTAAAGGTTACAGCAGACTGAGTCGATATCCTGCTTTTGGTCG GAGT TGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM588696             [                                            ccGAAAAAAGACACGTTAG TATGACTA GTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAATTGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACAGAGTCGATATCCTGCTTTTGGTCG GAGT TGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAGAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCCGGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGGACGAAAAGCGTTCCCCATTCATT GAGCAGTGCGATT GGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AL932780             [                                            ggtttAANAGACACGTNAGCTATGACTACCTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAATTGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACAGAGTCGATATCCTGCTTTTGGTCG GAGT TGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAGAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCC GGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX621162             [                                                                  TGACTA GTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAATTGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACTGAGTCAATATCCTGCTTTTGGTCG GAGT TGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCATTGAGAAACCAAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCC GGAAGGCGGAAGTTAGCATGGCTGTGGGCCANTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGA GGACGAAAAGCGTTCCCCATTCATT G GCAGTGCGATT GGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATATGTTGCTAACAGAAAATCCCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAATGGGGGATCACTAGCATGGGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGCGAAAAGGTCTGCTTTGATCCGCCNATTGACATATTTAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX623215             [                                                                                                     CTCATTAGATAGTTAAAAAATTGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACTGAGTCAATATCCTGCTTTTGGTCG GAGT TGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCATTGAGAAACCAAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCC GGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGA GGACGAAAAGCGTTCCCCATTCATT G GCAGTGCGATT GGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATATGTTGCTAACAGAAAAT CCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAAT GGTGATCACTAGCAT GGGATTCGGAGTAGCAAAATTAGTATGGTACTACCAAAAATTGCAGCGAAAANGNCTGC TTGATCCGCCAATTGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS093V6             [                                                                                                                                GCGTTGTGCGTTAAAGGTTACAGCAGACAGAGTCGATATCCTGCTTTTGGTCGAGAGTATGATCGTTCCCGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAGAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCC GGAAGGCGGAAGTTAGCATGGCTGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX608835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATT GGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATATGTTGCTAACAGAAAAT CCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAAT GGTGATCACTAGCAT GGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGCGAAAAGGTCTGC TTGATCCGCCAATTGACATA TTAGAAGATTTTCAAAAGCAAGAAGAGCACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCACAAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCAAAGAACACGTGCTGGAGCGCTCGATATGATGTTGAACTCATTTTCATTGCGGACATTTTGCCGATTGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGGTTTTTTTTTTTTTGTGTCGGGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTTCGAATCGAAACCACACTTTAGGAACACAGTTCCAGCTAGCATTATACTTTTTTCCCAAAATGTTCACATTTGGTGTGGTAAAATAGAAACCTTATTAGTTATATAATTTTTCGTTGGAATACAAGATCGAAG                                                                                  ]
[+] EMBL BM613171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgAAAAGCAAGAAGAGCACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCACAAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCAAAGAACACGTGCTGGAGCGCTCGATATGATGTTGTACTCATTTTCATTGCGGACATTTTGCCGATTGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGG   TTTTTTTTTTGTGTCGGGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTTTGAATCGAAACCACACTTTAGGAACACAGTTCCAGCTAGCATTATAC TTTTTCCCAAAATGTTCACATTTGGTGTGGTAGAATCGAAACCTTATTAGTTATATAATTTTTCGTTGGAATACAAGATCGAAGTAAATCAGTTTCCAATAAATTTAAATATCTGAGACAATTGAGTGCAATCACGTATACAAATACATTACCCTTAGTCAACCCT]


>consensus_9022#0 CCGCCTGTATCAACAAAAACATTGATGTCGATTTTTCCTTTGCAAAGAAAAAAGACACGT TAGTATGACTAGTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAAT TGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACTGAGTCGATATCCTGCTTTTGGTCGG AGTTGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAGAAACCGAAG CCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAG GAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCAT GCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGC AAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCT ACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGAC ACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATT CAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGGACGAAAAGCGTTC CCCATTCATTGGCAGTGCGATTGGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATAT GTTGCTAACAGAAAATCCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAATGGT GATCACTAGCATGGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGCG AAAAGGTCTGCTTGATCCGCCAATTGACATATTTAGAAGATTTTCAAAAGCAAGAAGAGC ACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCAC AAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCAAAGAAC ACGTGCTGGAGCGCTCGATATGATGTTGAACTCATTTTCATTGCGGACATTTTGCCGATT GCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGGTTTTTTTTTTTTTGTGTCGG GACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTTCGAATCGAAACCACACTTTAGGAA CACAGTTCCAGCTAGCATTATACTTTTTTCCCAAAATGTTCACATTTGGTGTGGTAAAAT AGAAACCTTATTAGTTATATAATTTTTCGTTGGAATACAAGATCGAAGTAAATCAGTTTC CAATAAATTTAAATATCTGAGACAATTGAGTGCAATCACGTATACAAATACATTACCCTT AGTCAACCCT



consensusID : consensus_9022#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1159
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGTGAGTCGATATCCTGCTTTTGGTCGGAGTTGATCGTTCGTGGGTAAAACAATGTCACAGTCCAAAGGCAGCACTGAAAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCGCACTGAACCCTACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGACGAAAAGCGTTCCCCATTCATTGGCAGTGCGATTGGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATATGTTGCTAACAGAAAATCCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAATGGTGATCACTAGCATGGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGCGAAAAGGTCTGCTTGATCCGCCAATTGACATATTAGAAGATTTTCAAAAGAAAGAAGAGCACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCACAAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCTGTTGTACTCATTTTCATTGCGGACATTTTGCCGATTGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGGTTTTTTTTTTTTTGTGTCGGGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTCCACACTTTAGGAACACAGTTCCAGCTAGCATTATACTTTTTCCCAAAATGTTCACATTTGGTGTGGTAGAATAGAAACCTTATTAGTTATATAATTTTTCGTTGCAATACAAGATCGAAGTAAATGAGTTTCCAATAAATTT]

[+] EMBL BM599798             [CCGCGGACGCGTGGGCGGACGCGTGGGTGAGTCGATATCCTGCTTTTGGTCGGAGTTGATCGTTCGTGGGTAAAACAATGTCACAGTCCAAAGGCAGCACTGAAAAACCGAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCGCACTGAACCCTACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGACGAAAAGCGTTCCCCATTCATTGGCAGTGCGATTGGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATATGTTGCTAACAGAAAATCCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAATGGTGATCACTAGCATGGGATTCGGAGTAGCAAAATTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS093V7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTCGTTAATGGTATTCATCATAATGGTGATTACTAGCATGGGATTTGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGCGAAAAGGTCTGCTTGATCCGCCAATTGACATATTAGAAGATTTTCAAAAGAAAGAAGAGCACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCACAAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCTGTTGTACTCATTTTCATTGCGGACATTTTGCCGATTGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGGTTTTTTTTTTTTTGTGTCGGGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTCCACACTTTAGGAACACAGTTCCAGCTAGCATTATACTTTTTCCCAAAATGTTCACATTTGGTGTGGTAGAATAGAAACCTTATTAGTTATATAATTTTTCGTTGCAATACAAGATCGAAGTAAATGAGTTTCCAATAAATTT]


>consensus_9022#1 CCGCGGACGCGTGGGCGGACGCGTGGGTGAGTCGATATCCTGCTTTTGGTCGGAGTTGAT CGTTCGTGGGTAAAACAATGTCACAGTCCAAAGGCAGCACTGAAAAACCGAAGCCAACAG AAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAA ATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCA AGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGC AGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCGCACTGAACCCTACCTGGG CGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGC TGCTCTCGTACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCATTCAGGCTG CGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGACGAAAAGCGTTCCCCATTCA TTGGCAGTGCGATTGGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATATGTTGCTAA CAGAAAATCCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAATGGTGATCACTA GCATGGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGCGAAAAGGTC TGCTTGATCCGCCAATTGACATATTAGAAGATTTTCAAAAGAAAGAAGAGCACGAGGATA CCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCACAAGCAAGAC AGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCTGTTGTACTCATTTTC ATTGCGGACATTTTGCCGATTGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAG GTTTTTTTTTTTTTGTGTCGGGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTCCAC ACTTTAGGAACACAGTTCCAGCTAGCATTATACTTTTTCCCAAAATGTTCACATTTGGTG TGGTAGAATAGAAACCTTATTAGTTATATAATTTTTCGTTGCAATACAAGATCGAAGTAA ATGAGTTTCCAATAAATTT



consensusID : consensus_9022#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 392
fasta sequence
                              [GATCGCCCCGAGGGTCACAGTCCAAGGGCAGCAGTGAGAAACCAAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGGTACGGCAAGGCGCTGCAACTTCAACACAG]

[+] EMBL AL932404             [GATCGCCCCGAGGGTCACAGTCCAAGGGCAGCAGTGAGAAACCAAAGCCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCTCGGTACGGCAAGGCGCTGCAACTTCAACACAG]


>consensus_9022#2 GATCGCCCCGAGGGTCACAGTCCAAGGGCAGCAGTGAGAAACCAAAGCCAACAGAAAAGG AGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAGGAAGGAAATCGGT GTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCATGCCATCAAGCTTA GTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGCAAGATGCAGCAGT ACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCTACCTGGGCGAAAG GGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGACACAGCGCTGCTCT CGGTACGGCAAGGCGCTGCAACTTCAACACAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9022#0      CCGCCTGTATCAACAAAAACATTGATGTCGATTTTTCCTTTGCAAAGAAAAAAGACACGT 60
consensus_9022#1      ------------------------------------------------------------
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      TAGTATGACTAGTTGTGTGCATGTAATTTGCTAGTTTTGCTCATTAGATAGTTAAAAAAT 120
consensus_9022#1      ------------------------------------------------------------
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      TGCACGGCGTTGTGCGTTAAAGGTTACAGCAGACTGAGTCGATATCCTGCTTTTGGTCGG 180
consensus_9022#1      ----CCGCGG-ACGCGTGGGCGG--ACGCGTGGGTGAGTCGATATCCTGCTTTTGGTCGG 53
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      AGTTGATCGTTCCTGGGTAAAACAATGTCACAGTCCAAGGGCAGCAGTGAGAAACCGAAG 240
consensus_9022#1      AGTTGATCGTTCGTGGGTAAAACAATGTCACAGTCCAAAGGCAGCACTGAAAAACCGAAG 113
consensus_9022#2      ----GATCGCCCCGAGG---------GTCACAGTCCAAGGGCAGCAGTGAGAAACCAAAG 47
                          *****  *   **         ************ ******* *** ***** ***

consensus_9022#0      CCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAG 300
consensus_9022#1      CCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAG 173
consensus_9022#2      CCAACAGAAAAGGAGACAGGCAAGAGTAACCTTAATCTGACGGCGGATGAACTGAAAGAG 107
                      ************************************************************

consensus_9022#0      GAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCAT 360
consensus_9022#1      GAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCAT 233
consensus_9022#2      GAAGGAAATCGGTGTGTGAAAGCCGGCAACTTCACCGAAGCGATCCTTCATTACACTCAT 167
                      ************************************************************

consensus_9022#0      GCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGC 420
consensus_9022#1      GCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGC 293
consensus_9022#2      GCCATCAAGCTTAGTCCCGCGGATCCTATACTGTACAGTAATCGATCGTTGGCTTTCTGC 227
                      ************************************************************

consensus_9022#0      AAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCT 480
consensus_9022#1      AAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCGCACTGAACCCT 353
consensus_9022#2      AAGATGCAGCAGTACTACTACGCCAATGCAGACGCAGACAAGGCGATCACACTGAACCCT 287
                      ************************************************ ***********

consensus_9022#0      ACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGAC 540
consensus_9022#1      ACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGAC 413
consensus_9022#2      ACCTGGGCGAAAGGGTACTTCCGGAAGGCGGAAGTTAGCATGGCTGTGGGCCAGTACGAC 347
                      ************************************************************

consensus_9022#0      ACAGCGCTGCTCTCG-TACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCAT 599
consensus_9022#1      ACAGCGCTGCTCTCG-TACGGCAAGGCGCTGCAACTTCAACCACAGGATATGGGAATCAT 472
consensus_9022#2      ACAGCGCTGCTCTCGGTACGGCAAGGCGCTGCAACTTCAAC-ACAG-------------- 392
                      *************** ************************* ****              

consensus_9022#0      TCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGGGACGAAAAGCGTT 659
consensus_9022#1      TCAGGCTGCGCGGAAAGCTGCCACGTTAAGCAACAAAGAGCGTGAGG-ACGAAAAGCGTT 531
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      CCCCATTCATTGGCAGTGCGATTGGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATA 719
consensus_9022#1      CCCCATTCATTGGCAGTGCGATTGGCTGTGTGATCGGCTTATGCATCGTGCTGGCCGATA 591
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      TGTTGCTAACAGAAAATCCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAATGG 779
consensus_9022#1      TGTTGCTAACAGAAAATCCGACCATCAGGTATTCTTCGTTAATGGTATTCATCATAATGG 651
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      TGATCACTAGCATGGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGC 839
consensus_9022#1      TGATCACTAGCATGGGATTCGGAGTAGCAAAATTAGTATGGTACTACAAAAAATTGCAGC 711
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      GAAAAGGTCTGCTTGATCCGCCAATTGACATATTTAGAAGATTTTCAAAAGCAAGAAGAG 899
consensus_9022#1      GAAAAGGTCTGCTTGATCCGCCAATTGACATATT-AGAAGATTTTCAAAAGAAAGAAGAG 770
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      CACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCA 959
consensus_9022#1      CACGAGGATACCTCACAAACGGGCGACCAACGTCACGAAAGGAATCGATACACAAAAGCA 830
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      CAAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGCAAAGAA 1019
consensus_9022#1      CAAGCAAGACAGCGTTTGAAAAAGGCAAAAATATAGTGTGATGGCCTTTTCGGC------ 884
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      CACGTGCTGGAGCGCTCGATATGATGTTGAACTCATTTTCATTGCGGACATTTTGCCGAT 1079
consensus_9022#1      ------------------------TGTTGTACTCATTTTCATTGCGGACATTTTGCCGAT 920
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      TGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGGTTTTTTTTTTTTTGTGTCG 1139
consensus_9022#1      TGCCACACGTACTGTGCCGTTTATAGTTAAATATCCAAAGGTTTTTTTTTTTTTGTGTCG 980
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      GGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGTTCGAATCGAAACCACACTTTAGGA 1199
consensus_9022#1      GGACTTTGTCAAAGTAATCAACATGCGCAGAGGTGT-----------CCACACTTTAGGA 1029
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      ACACAGTTCCAGCTAGCATTATACTTTTTTCCCAAAATGTTCACATTTGGTGTGGTAAAA 1259
consensus_9022#1      ACACAGTTCCAGCTAGCATTATACTTTTT-CCCAAAATGTTCACATTTGGTGTGGTAGAA 1088
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      TAGAAACCTTATTAGTTATATAATTTTTCGTTGGAATACAAGATCGAAGTAAATCAGTTT 1319
consensus_9022#1      TAGAAACCTTATTAGTTATATAATTTTTCGTTGCAATACAAGATCGAAGTAAATGAGTTT 1148
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      CCAATAAATTTAAATATCTGAGACAATTGAGTGCAATCACGTATACAAATACATTACCCT 1379
consensus_9022#1      CCAATAAATTT------------------------------------------------- 1159
consensus_9022#2      ------------------------------------------------------------
                                                                                  

consensus_9022#0      TAGTCAACCCT 1390
consensus_9022#1      -----------
consensus_9022#2      -----------
                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)