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Anopheles gambiae
cluster # 9060 cluster # 9060       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9060#0 length = 1106 sequences # 12  
consensus_9060#1 length = 565 sequences # 2  

consensusID : consensus_9060#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1106
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGAGGTGTAACCTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGTTGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGTCATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG-TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA-CAGGACTTTCTGCCCGAATCGATGCATCTGATCA-CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC-TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACACTTAGCTACAAAGATTGCTAGGTATTAGATATTGAAGATT-TTGTAGTAACTCTTTGTGGACGAATCCAGGGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAAGTGTAATCTTTTTAATGGAACTAATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGG-CCTCTAATAACGAACGCTTTCACACGATATTGCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACTTTGTCAAGATACAAGCGAATAAAACGACCATCCCACAGGAGCGCACAGGATATCGTCATAAAAA]

[+] EMBL BM632869             [CCGCGGACGCGTGGGCGGACGCGTGGGGTAACCTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGTTGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGCAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCCATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGCCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCGTTCTGGCTGAACAAGTGCTGGAAGACGCGAGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGGTTGTCCTCTTTTTTAACTACAAGATTGC TTCATCCATAAGCCTTGGAAGAATTATTTTGATTCATTATGTGGGTGAGTACAAATATGTGGGATAGTTGATACATTTAGCTACAA                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AL930595             [             cagatcgcCGAGGTGTAA CTTTTCTGGGTGGCTTCTGGGCGC CG TCACGG TTGTTGGGGTAGAAACTTTAAGAAACCCAGCTTA CGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCCATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCGTTGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATACCAGGACTTTTTGGCCGAGTCGATGCATCTGATCACCGCTCAAtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AF437886             [                    atccacTGTAACCTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGTTGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCCATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACATTTAGCTACAAAGATTGCTAGGTATTAGATATT TACATTCTTGTGGTAACTCAT    GAGGAATCCAGGGGTCAGAAGAATTAATGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAGGTGTAATCTTTTTAATGGAACAAATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGG CCTCTAATAACGAACGCTTTCACACCATATTGCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACTTTGTCAAGATACAAGCGAATAAAACGACCATCCCACAGGAGCGCACAGGATATCGTCATAAAAA]
[+] EMBL CNS09HSF             [                            TAACCTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGT        AAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGAAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGTCATTCTAATGGTACGATCTGACGAACCGAGACGCGATTCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACACTTAGCTACAAAGATTGCTAGGTATTAGATATTGAAGATT TTGTAGTAACTCTTTGTGGACGAATCCAGGGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAAGTGTAATCTTTTTAATGGAACTAATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGG CCTCTAATAACGAACGCTTTCACACGATATTGCAACCTCAGCTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACT                                                                ]
[+] EMBL CNS093OS             [                              aaCTTTTTTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGT        AAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGTCATTCTAATGGTACGATCTGACGAACCGAGACGCGATTCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGAAA AAAAAAACGATAAAGGAAAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACACTTAGCTACAAAGATTGCTAGGTATTAGATATTGAAGATT TTGTAGTAACTCTTTGTGGACGAATCAAGGGGTCCGAAGA                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08G2W             [                              aaCTTTTCTGGGTGGCTTCTGGGCGCTCGTTCA GGTTTGTTGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCCATTCTAATGGTACGATCTGACGAACCGAGACGCAATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCTTTTCTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACATTTAGCTACAAAGATTGCTAGGTATTAGATATT TACATTCTTGTGGTAACTCAT    GAGGAATCCAGGGGTCAGAAGAATTAATGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAGGTGTAATCTTTTTAATGGAACAAATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGT                                                                                                                                                                                                      ]
[+] EMBL CNS09MVB             [                                             CTTCTGGGCGCTCGTTCACGGTTTGT        AAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGTCATTCTAATGGTACGATCTGACGAACCGAGACGCGATTCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACACTTAGCTACAAAGATTGCTAGGTATTAGATATTGAAGATT TTGTAGTAACTCTTTGTGGACGAATCCAGGGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATAAAAAAGTGTAATCTTTTTAATGGAACTAATTACTTACTCACT                                                                                                                                                                                                                                     ]
[-] EMBL CNS09HSG             [                                                                                                                                               GATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGGACTGGTGATTTTCCAATGTGTCATTCTAATGGTACGTTCTGACGAACCGAGACGCGATTCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGCGTTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACACTTAGCTACAAAGATTGCTAGGTATTAGATATTGAAGATT TTGTAGTAACTCTTTGTGGACGAATCCAGGGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAAGTGTAATCTTTTTAATGGAACTAATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCGGCAGTAGTATCCAAACCCGATCACGATCT GT TCTCTAATAACGAACGCTTTCACACGATATTGCAACCTCAGCTTAGGCCTACCACCTTAGGTCTGTCTCTGTGAACAACCTATAAAGACTTTGTCAAGATTCAAGCGAATAAAACGACCATCCCACAGG GCGCA                   ]
[-] EMBL CNS093OT             [                                                                                                                                                                                                 CCAATGTGTCATTCTAATGGTACGATCTGACGAACCGAGACGCGATTCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTTTTACACTTAGCTACAAAGATTGCTAGGTATTAGATATTGAAGATT TTGTAGTAACTCTTTGTGGACGAATCCAGGGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAAGTGTAATCTTTTTAATGGAACTAATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGG CCTCTAATAACGAACGCTTTCACACGATATTGCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACTTTGTCAAGATTCAAGCGAATAAAACGACCATCCCACAGGAGCGCACgccgtt            ]
[-] EMBL CNS08G2X             [                                                                                                                                                                                                                                    CGAGACGCAATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTTTTTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGAAAAATGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTTTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACATTTAGCTACAAAGATTGCTAGGTATTAGATATT TACATTCTTGTGGTTACTCAT    GAGGAATCCAGGGGTCAGAAGAATTAATGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAGGTGTAATCTTTTTAATGGAACAAATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGG CCTCTAATAACGAACGCTTTCACACCATATTGCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACTTTGTCAAGATACAAGCGAAT                                            ]
[-] EMBL CNS09MVC             [                                                                                                                                                                                                                                                                                                                                                TCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCG TGGTGAACGATAAGGGCGAGTTCCATTACGTCAAGATA CAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGC TTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACACTTAGCTACAAAGATTGCTAGGTATTAGATATTGAAGATT TTGTAGTAACTCTTTGTGGACGAATCCAGGGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAAGTGTAATCTTTTTAATGGAACTAATAACTAACTAACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGGCCCTCTAATAACGAACGCTTTCACACGATATTGCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACTTTGTCAAGATTCAAGCGAATAAAACGA                                     ]
[-] EMBL CNS08MIV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACTACAAGGTTGC TTCATCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACATTTAGCTACAAAGATTACTAAGAATTAGATATTGAAGATT TTGTAGTAACTCTTTGTGGACGAATCCGGGGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAAGTGAAATCTTTTTAATGGAACTAATTACTTACTAACTTACTTATTCTTCGCTTAAATTGCTTTGTGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGG CCTCTAATAACGAACGCTTTCACACGATATTGCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACTTTGTCAAGATACAAGCGAATAAAACGAC                                    ]


>consensus_9060#0 CCGCGGACGCGTGGGCGGACGCGAGGTGTAACCTTTTCTGGGTGGCTTCTGGGCGCTCGT TCACGGTTTGTTGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAG AAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTG CACTGGTGATTTTCCAATGTGTCATTCTAATGGTACGATCTGACGAACCGAGACGCGATG CAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCG CTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGG ATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCAAGCGGGCGTGGTGAACGATA AGGGCGAGTTCCATTACGTCAAGATACAGGACTTTCTGCCCGAATCGATGCATCTGATCA CGCTCAACTGGTTCAAGCGCTGTCTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCAT TCTGGCTGAACAAGTGCTGGAAGACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAG CTTTTTGTTTGTCCTCTTTTTGAACTACAAGGTTGCTTCACCCATAAGCCTTGGGAGAGT TATTTTGATTCATTATGTGGTTGAGTACAAATATGTGGGATAGTTGATACACTTAGCTAC AAAGATTGCTAGGTATTAGATATTGAAGATTTTGTAGTAACTCTTTGTGGACGAATCCAG GGGTCCGAAGAATTAACGTAGAAAGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAA AGTGTAATCTTTTTAATGGAACTAATTACTTACTCACTTACTTATTCTTCGCTTAAATTG CTTTGCGGTCATGGTCTGCTGCAGTAGTATCCAAACCCGATCACGATCTCGGCCTCTAAT AACGAACGCTTTCACACGATATTGCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCT CTGTGAACAACCTATAAAGACTTTGTCAAGATACAAGCGAATAAAACGACCATCCCACAG GAGCGCACAGGATATCGTCATAAAAA



consensusID : consensus_9060#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 565
fasta sequence
                              [AACTGTAACTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGTGTATGTGTATACCTTGCAATTAAATTCGTGTAGTCACAGTCAAGTGCAGCGGTGCAGTTCCCGTGGAGCCCACGCAGTTTCTTTTCATCTGTGGAACCATTCCCCTGGCCTTTGTTCTTGTCGGTCACATTTTAATATCCTGTGCGAGCTCTCTTGTTCACACTGCTTTACTCCTGTGCCATGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCCATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCCAGCGGGCG]

[+] EMBL CNS08MIU             [AACTGTAACTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGTGTATGTGTATACCTTGCAATTAAATTCGTGTAGTCACAGTCAAGTGCAGCGGTGCAGTTCCCGTGGAGCCCACGCAGTTTCTTTTCATCTGTGGAACCATTCCCCTGGCCTTTGTTCTTGTCGGTCACATTTTAATATCCTGTGCGAGCTCTCTTGTTCACACTGCTTTACTCCTGTGCCATGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACACGATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCCATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTGCTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGATGCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATGAACTGTCTCTTCCATCCAGCGGGCG]
[+] EMBL CNS08FYW             [                                         GTTTGTGTATGTGTATA CTTGCAATTAAATTCGTGTAGTCACAGTCAAGTGCAGCGGTGCAGTTCCCGTGGAGCCCACGCAGTTTCTTTTCATCTGTGGAACCATTCCCCTGGCCTTTGTTCTTGTCGGTCACATTTTAATATCCTGTGCGAGCTCTCTTGTTCACACTGCTTTACTCCTGTGCCATGGGGTAGAAACTTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCTATGGGACACGTTTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGG                                                                                                                                                                                                                              ]


>consensus_9060#1 AACTGTAACTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGTGTATGTGTATACC TTGCAATTAAATTCGTGTAGTCACAGTCAAGTGCAGCGGTGCAGTTCCCGTGGAGCCCAC GCAGTTTCTTTTCATCTGTGGAACCATTCCCCTGGCCTTTGTTCTTGTCGGTCACATTTT AATATCCTGTGCGAGCTCTCTTGTTCACACTGCTTTACTCCTGTGCCATGGGGTAGAAAC TTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACAC GATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCC ATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTG CTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGAT GCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATG AACTGTCTCTTCCATCCAGCGGGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9060#0      ------------------------------------------------------------
consensus_9060#1      AACTGTAACTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACGGTTTGTGTATGTGTATACC 60
                                                                                  

consensus_9060#0      ------------------------------------------------------------
consensus_9060#1      TTGCAATTAAATTCGTGTAGTCACAGTCAAGTGCAGCGGTGCAGTTCCCGTGGAGCCCAC 120
                                                                                  

consensus_9060#0      ----------------------------CCGCGGACGCGTG-----GGCGGACGCGAGGT 27
consensus_9060#1      GCAGTTTCTTTTCATCTGTGGAACCATTCCCCTGGCCTTTGTTCTTGTCGGTCACATTTT 180
                                                  ** * * *   **     * *** * *    *

consensus_9060#0      G-TAACCTTTTCTGGGTGGCTTCTGGGCGCTCGTTCACG---GTTTGTTGGGGTAGAAAC 83
consensus_9060#1      AATATCCTGTGCGAGCTCTCTTGTTCACACTGCTTTACTCCTGTGCCATGGGGTAGAAAC 240
                        ** *** * *  * *  *** *   * **  ** **    **    ************

consensus_9060#0      TTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACAC 143
consensus_9060#1      TTTAAGAAACCCAGCTTACCGGCTTACAGCTTTGCAGAAGCGACGACAGCGATGGGACAC 300
                      ************************************************************

consensus_9060#0      GATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGTC 203
consensus_9060#1      GATTCGTGCTGGAGCTCGAGGTGGAGAGTGTTAGCTGCACTGGTGATTTTCCAATGTGCC 360
                      ********************************************************** *

consensus_9060#0      ATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTG 263
consensus_9060#1      ATTCTAATGGTACGATCTGACGAACCGAGACGCGATGCAAATTACCCTCCACCGGAGTTG 420
                      ************************************************************

consensus_9060#0      CTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGAT 323
consensus_9060#1      CTGGAGAAGATGAAACCAATGCACGATGCCTGCGTCGCTGAGACGGGTGCATCCGAGGAT 480
                      ************************************************************

consensus_9060#0      GCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATG 383
consensus_9060#1      GCCATCAAGCGGTTCAGCGATCAGGAGATCCACGAGGATGACAAGCTGAAGTGCTACATG 540
                      ************************************************************

consensus_9060#0      AACTGTCTCTTCCATCAAGCGGGCGTGGTGAACGATAAGGGCGAGTTCCATTACGTCAAG 443
consensus_9060#1      AACTGTCTCTTCCATCCAGCGGGCG----------------------------------- 565
                      **************** ********                                   

consensus_9060#0      ATACAGGACTTTCTGCCCGAATCGATGCATCTGATCACGCTCAACTGGTTCAAGCGCTGT 503
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      CTGTATCCGGAGGGCGAGAACGGCTGCGAGAAAGCATTCTGGCTGAACAAGTGCTGGAAG 563
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      ACGCGGGACCCGGTGCACTACTTTTTACCGTAGTGAGCTTTTTGTTTGTCCTCTTTTTGA 623
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      ACTACAAGGTTGCTTCACCCATAAGCCTTGGGAGAGTTATTTTGATTCATTATGTGGTTG 683
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      AGTACAAATATGTGGGATAGTTGATACACTTAGCTACAAAGATTGCTAGGTATTAGATAT 743
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      TGAAGATTTTGTAGTAACTCTTTGTGGACGAATCCAGGGGTCCGAAGAATTAACGTAGAA 803
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      AGAAAGAGGAAAGCATTCTAGAGCAAAAGGATATCAAAGTGTAATCTTTTTAATGGAACT 863
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      AATTACTTACTCACTTACTTATTCTTCGCTTAAATTGCTTTGCGGTCATGGTCTGCTGCA 923
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      GTAGTATCCAAACCCGATCACGATCTCGGCCTCTAATAACGAACGCTTTCACACGATATT 983
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      GCAACCTCAACTTAGGCCTACCACCTTAGCTCTGTCTCTGTGAACAACCTATAAAGACTT 1043
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      TGTCAAGATACAAGCGAATAAAACGACCATCCCACAGGAGCGCACAGGATATCGTCATAA 1103
consensus_9060#1      ------------------------------------------------------------
                                                                                  

consensus_9060#0      AAA 1106
consensus_9060#1      ---
                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)