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Anopheles gambiae
cluster # 9096 cluster # 9096       Sequences # 14       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9096#0 length = 1323 sequences # 1  
consensus_9096#1 length = 793 sequences # 8  
consensus_9096#2 length = 757 sequences # 1  
consensus_9096#3 length = 472 sequences # 3  
consensus_9096#4 length = 109 sequences # 1  

consensusID : consensus_9096#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1323
fasta sequence
                              [CGAGGTAATACTGGCAACGGTACAACACGGCAGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCTGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGTGTGCTGCCTGGGCGGTTCGATACGCCCCGAGTAGGAACTGGTCCTGCCGTACTGGCATCTGATGCTGATTGCCATGCTGCACATGAACGTTCTGCCTCAGTCTCGTTAGTGAACCACGACAAGGAGAACCTTTCTTCTTGGACAACTAGCTTAGCCTTTGGCTTGAAATGGAAAATTCCCCTGGGGAAGGCCTGTGGCTGGCCATGTGCTCTAGCCTGGCCTTTGGNGCCCCTGGTTGGCCNGCCCTGCCCCTTTCAAACGTGTTGGGGAACGGTGGTTGGGCCAGGACAAGTGTTNGACTGCCTGGAAACAGAACAGTGGTTTGGTTCCCCTGGCCCGGTGGCAAATTTGGTTTGCGTCGGCCGGTTTGATTGCCCTGGCATTCAAGAGGTTTTCCCTTGGGGGGGACAGGAAAACCAAACACCTGATACAACCCCAACGGACCTTGGTTAACCCGGGGCCCCGGCCCCGGGNGGGAACCGGTCGGGGGGGAAACCTCNGCCCCCCACGCGGACCCTGGCCCCCCCTGGTTTGGGCCCCCATGTTGTGGAAACCCAAAGTTTTCCCACCCTGGGTTTACCAAACTTTTCCCCCAGGGGCCGCGAAAGCGACCCACTATTGGNAAAAAACCCCTCTGNGAGCGGCACTCGGAGCGATCCCACCGGANCAGCGGAAANGGACCACACCCANAATGGGCCTTTGGTTTCCCCCCAAACAACGGGGCCTGAGCCTTTTAAAACCCCTTTTGGCCGAAGGCCTACGGAGGGGCGACTTTGAGGCGCTCATTGGTGGGCACTCGGGAGNGGCTNGGCCCTGGGTGTNGGGCCCCCCAAAAAAACTTTCCCGGGNATAAAACNCCCCTTTATGACNACCAACCCTTCTTTCTATTCCCGGGTTCCTCCNAAACACGGCAGGTGTNTATGTNGGGAAAACAACGGCCCCCAACACAGCTGCCCATTTGTTGGCCCAANAANGTGTGGTGGAAACNACCATTATAAACNCCCNGGCCACCTCCTGGGTGGTGTAAANAGTGTGCGCCCAAAACGTGTGGTGTCCCGTACGAGTTAGGATATATGAGGTGGTGTGCGCCATGCGTGAAACNAGGGCACCACCGTGGGATGTTATCTGTGTCCACCATNCTCCCCATTTATAAACCCCCCCATATTTTTGTGGCGNCACTGTTGTAGGG]

[+] EMBL AL695055             [CGAGGTAATACTGGCAACGGTACAACACGGCAGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCTGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGTGTGCTGCCTGGGCGGTTCGATACGCCCCGAGTAGGAACTGGTCCTGCCGTACTGGCATCTGATGCTGATTGCCATGCTGCACATGAACGTTCTGCCTCAGTCTCGTTAGTGAACCACGACAAGGAGAACCTTTCTTCTTGGACAACTAGCTTAGCCTTTGGCTTGAAATGGAAAATTCCCCTGGGGAAGGCCTGTGGCTGGCCATGTGCTCTAGCCTGGCCTTTGGNGCCCCTGGTTGGCCNGCCCTGCCCCTTTCAAACGTGTTGGGGAACGGTGGTTGGGCCAGGACAAGTGTTNGACTGCCTGGAAACAGAACAGTGGTTTGGTTCCCCTGGCCCGGTGGCAAATTTGGTTTGCGTCGGCCGGTTTGATTGCCCTGGCATTCAAGAGGTTTTCCCTTGGGGGGGACAGGAAAACCAAACACCTGATACAACCCCAACGGACCTTGGTTAACCCGGGGCCCCGGCCCCGGGNGGGAACCGGTCGGGGGGGAAACCTCNGCCCCCCACGCGGACCCTGGCCCCCCCTGGTTTGGGCCCCCATGTTGTGGAAACCCAAAGTTTTCCCACCCTGGGTTTACCAAACTTTTCCCCCAGGGGCCGCGAAAGCGACCCACTATTGGNAAAAAACCCCTCTGNGAGCGGCACTCGGAGCGATCCCACCGGANCAGCGGAAANGGACCACACCCANAATGGGCCTTTGGTTTCCCCCCAAACAACGGGGCCTGAGCCTTTTAAAACCCCTTTTGGCCGAAGGCCTACGGAGGGGCGACTTTGAGGCGCTCATTGGTGGGCACTCGGGAGNGGCTNGGCCCTGGGTGTNGGGCCCCCCAAAAAAACTTTCCCGGGNATAAAACNCCCCTTTATGACNACCAACCCTTCTTTCTATTCCCGGGTTCCTCCNAAACACGGCAGGTGTNTATGTNGGGAAAACAACGGCCCCCAACACAGCTGCCCATTTGTTGGCCCAANAANGTGTGGTGGAAACNACCATTATAAACNCCCNGGCCACCTCCTGGGTGGTGTAAANAGTGTGCGCCCAAAACGTGTGGTGTCCCGTACGAGTTAGGATATATGAGGTGGTGTGCGCCATGCGTGAAACNAGGGCACCACCGTGGGATGTTATCTGTGTCCACCATNCTCCCCATTTATAAACCCCCCCATATTTTTGTGGCGNCACTGTTGTAGGG]


>consensus_9096#0 CGAGGTAATACTGGCAACGGTACAACACGGCAGGAGACGACAGCAGCATGCACCACTGAA AAAGAAGCAGCATCCTGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCG AAACCACCATGTGTGTGCTGCCTGGGCGGTTCGATACGCCCCGAGTAGGAACTGGTCCTG CCGTACTGGCATCTGATGCTGATTGCCATGCTGCACATGAACGTTCTGCCTCAGTCTCGT TAGTGAACCACGACAAGGAGAACCTTTCTTCTTGGACAACTAGCTTAGCCTTTGGCTTGA AATGGAAAATTCCCCTGGGGAAGGCCTGTGGCTGGCCATGTGCTCTAGCCTGGCCTTTGG NGCCCCTGGTTGGCCNGCCCTGCCCCTTTCAAACGTGTTGGGGAACGGTGGTTGGGCCAG GACAAGTGTTNGACTGCCTGGAAACAGAACAGTGGTTTGGTTCCCCTGGCCCGGTGGCAA ATTTGGTTTGCGTCGGCCGGTTTGATTGCCCTGGCATTCAAGAGGTTTTCCCTTGGGGGG GACAGGAAAACCAAACACCTGATACAACCCCAACGGACCTTGGTTAACCCGGGGCCCCGG CCCCGGGNGGGAACCGGTCGGGGGGGAAACCTCNGCCCCCCACGCGGACCCTGGCCCCCC CTGGTTTGGGCCCCCATGTTGTGGAAACCCAAAGTTTTCCCACCCTGGGTTTACCAAACT TTTCCCCCAGGGGCCGCGAAAGCGACCCACTATTGGNAAAAAACCCCTCTGNGAGCGGCA CTCGGAGCGATCCCACCGGANCAGCGGAAANGGACCACACCCANAATGGGCCTTTGGTTT CCCCCCAAACAACGGGGCCTGAGCCTTTTAAAACCCCTTTTGGCCGAAGGCCTACGGAGG GGCGACTTTGAGGCGCTCATTGGTGGGCACTCGGGAGNGGCTNGGCCCTGGGTGTNGGGC CCCCCAAAAAAACTTTCCCGGGNATAAAACNCCCCTTTATGACNACCAACCCTTCTTTCT ATTCCCGGGTTCCTCCNAAACACGGCAGGTGTNTATGTNGGGAAAACAACGGCCCCCAAC ACAGCTGCCCATTTGTTGGCCCAANAANGTGTGGTGGAAACNACCATTATAAACNCCCNG GCCACCTCCTGGGTGGTGTAAANAGTGTGCGCCCAAAACGTGTGGTGTCCCGTACGAGTT AGGATATATGAGGTGGTGTGCGCCATGCGTGAAACNAGGGCACCACCGTGGGATGTTATC TGTGTCCACCATNCTCCCCATTTATAAACCCCCCCATATTTTTGTGGCGNCACTGTTGTA GGG



consensusID : consensus_9096#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 793
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGGTGCCTGTTTTGACAGGTACGCGGGGTGTTTGGTGGTGAAGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCA-GCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCC-GGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCA-GGCGGTGGCGAGCGTGCTCTACCTGCTGCTCGAGGTGCACGGCACGCGCAACGTGCACTGCGACCATGCCGCGTCCCATCTCGGCAAGGCGCAGGGCATCGTGAACCTGCTTCGCTCGATACCGTACCAGA]

[+] EMBL BM597118             [CCGCCCACGCGTCCGCCCACGCGTCCGGGGTGCCTGTTTTGACAGGTACGCGGGGTGTTTGGTGGTGAAGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCA GCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCC GGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCA GGCGGTGGCGAGCGTG                                                                                                                   ]
[+] EMBL CNS09G95             [                                          CAGGTTCGCGGGGTGTTTGGTGGTGAAGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCGGCGTGGTAGCTTTGTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGT GTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCA  CGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAAAAAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCC GGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGA CAGGGCGGTGGCGAGCGTGCTCTACCTGCTGCTCGAGGTGCACGGCACGCGCAACGTGCACTGCGACCATGCCGCGTCCCATCTCGGCAAGGCGCAGGGCATCGTGAACCTGCTTCGCTCGATACCGTACCAGA]
[+] EMBL BM650707             [                                                                                              ccgGGTACAACACGGCAGGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCA GCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCCGGGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCA GGCGGTGGCGAGCGTGCTCTACCTGCTGCTCGAGGTGCACGG                                                                                         ]
[+] EMBL BX618687             [                                                                                                                               ATGCACCACTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCA GCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCC GGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCA GGCGGTGGCGAGCGTGCTCTACCTGCTGCTCGAGGTGCACGGC                                                                                        ]
[+] EMBL BX629174             [                                                                                                                                                                                                                                                                                                                                                         CTGAAGAATCCNGAGCGGCNCATGCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCNGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGNCGCC GGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCATCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCATCACGGTGAAGCAGCTGGAGGACTACTCGGAGCA GGCGGTGTCGAGCGTGNTCTACCTGCTGCT                                                                                                     ]
[+] EMBL BX629280             [                                                                                                                                                                                                                                                                                                                                                         CTGAAGAATCCNGAGCGGCNCATGCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCNGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGNCGCC GGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCATCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCATCACGGTGAAGCAGCTGGAGGACTACTCGGAGCA GGCGGTGTCGAGCGTGNTCTACCTGCTGCT                                                                                                     ]
[+] EMBL BX610625             [                                                                                                                                                                                                                                                                                                                                                                                                                  GGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCC GGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACCGGGCGTTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACTCGAACCTGCACTTCG                                                                                                                                                                      ]
[+] EMBL BX610626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCACCACGCAGAACCGGCCGCC GGACGGGGACGCCCGCGCCGGGCCGGACCATCCCGTCATCCGCGAGCGGCACCGGGCGTTCCGCGAGCACAAGCTGGCCAAGCGCT                                                                                                                                                                                                                      ]


>consensus_9096#1 CCGCCCACGCGTCCGCCCACGCGTCCGGGGTGCCTGTTTTGACAGGTACGCGGGGTGTTT GGTGGTGAAGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACGA CAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGT TTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCG AGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGT CTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAG CGGCGCAGCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAG GTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACG CTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAG CTGCACCGGGCGGTCCGCGAGCACAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCG GCGCGGGCCAACTCGAACCTGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAG CAGGCGGTGGCGAGCGTGCTCTACCTGCTGCTCGAGGTGCACGGCACGCGCAACGTGCAC TGCGACCATGCCGCGTCCCATCTCGGCAAGGCGCAGGGCATCGTGAACCTGCTTCGCTCG ATACCGTACCAGA



consensusID : consensus_9096#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 757
fasta sequence
                              [GCCAGATCGGCCACGAGGNGTACGCGGGGTGTTTGGTGGTGACAGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCGACCACGCTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCGACCGGGCGGTCCGCGAGCANCAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACGTCGAACCTGGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCAGGCGGTGGCGAAGCGTGCTCGTACCTGCTGCGTCGAGGTGCACGGCACGCGCAACGTGCACTGGGANCATGCCGGGGTCCCATCTCGGGAAGGCGGCAAGGGCATCGTGNGAC]

[+] EMBL BX468671             [GCCAGATCGGCCACGAGGNGTACGCGGGGTGTTTGGTGGTGACAGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCGACCACGCTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCGACCGGGCGGTCCGCGAGCANCAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACGTCGAACCTGGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCAGGCGGTGGCGAAGCGTGCTCGTACCTGCTGCGTCGAGGTGCACGGCACGCGCAACGTGCACTGGGANCATGCCGGGGTCCCATCTCGGGAAGGCGGCAAGGGCATCGTGNGAC]


>consensus_9096#2 GCCAGATCGGCCACGAGGNGTACGCGGGGTGTTTGGTGGTGACAGCAAAAACAGTGAAAA ATACCGGCAAACGGTACAACACGGCAGGGAGACGACAGCAGCATGCACCACTGAAAAAGA AGCAGCATCCGCGTTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACC ACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGGTGGAACGGTCCGCCGTACGGC ATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGA GAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCCGTGCG CGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGT GATGCCGCTCAAGTTCTGGGAGAACACCGTCGACCACGCTGTACCGGCCGCCGGACGGGG ACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCGACCGGGCGGTCCGCGAG CANCAAGCTGTCCAAGCGCTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACGTCGAACC TGGCACTTCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCAGGCGGTGGCGAAGCGT GCTCGTACCTGCTGCGTCGAGGTGCACGGCACGCGCAACGTGCACTGGGANCATGCCGGG GTCCCATCTCGGGAAGGCGGCAAGGGCATCGTGNGAC



consensusID : consensus_9096#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 472
fasta sequence
                              [AGAATCGCCCCGAGGNTGCAACGGTACAACACGGCAGGCAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACC]

[+] EMBL AL931101             [AGAATCGCCCCGAGGNTGCAACGGTACAACACGGCAGGCAGACGACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCAATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGCCGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCACGACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACC]
[+] EMBL BM611601             [                                                                                                                                                                                                                                                                                                              CGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCTATGTGGGCGTGATGCCGCTCAAGTTCTGGGAAAACACCGac                                                                         ]
[+] EMBL CNS08YAQ             [                                                                                                                                                                                                                                                                                                                              GTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCAGCTAAAGTTCTGGGAGAACACGGTCACC                                                                      ]


>consensus_9096#3 AGAATCGCCCCGAGGNTGCAACGGTACAACACGGCAGGCAGACGACAGCAGCATGCACCA CTGAAAAAGAAGCAGCATCCGCGTGGTAGCTTTTTATAGTATTGTTTTTCGAATTGCTCA ATCGAAACCACCATGTGGTGCTGCCGGGCGGTTCGATACGCCCCGAGTGGAACGGTCCGC CGTACGGCATCGAGCGATGCCAGCGCACAGAACGTCTGCCTCAGTCTCGTTAGGAACCAC GACAAGGAGAACTTTCTCTGCACGCTGCTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTG GCCGTGCGCGCCTTCAACGTGGAGGTGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAAT GTGGGCGTGATGCCGCTCAAGTTCTGGGAGAACACCGTCACCACGCTGTACCGGCCGCCG GACGGGGACGCCCGCGCCGTGCCGGACCATCCCGTCATCCGCGAGCTGCACC



consensusID : consensus_9096#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 109
fasta sequence
                              [CGGACGGGGACGCCCGCGCCGGGCCGGACCACCCCGTCACCCGCGAGCGGCACCGGGCGAACCGCGAGCACAAGCGGGCCAAGCGCAACCGGCAGCGGCCGGGGGCGGC]

[+] EMBL BX610624             [CGGACGGGGACGCCCGCGCCGGGCCGGACCACCCCGTCACCCGCGAGCGGCACCGGGCGAACCGCGAGCACAAGCGGGCCAAGCGCAACCGGCAGCGGCCGGGGGCGGC]


>consensus_9096#4 CGGACGGGGACGCCCGCGCCGGGCCGGACCACCCCGTCACCCGCGAGCGGCACCGGGCGA ACCGCGAGCACAAGCGGGCCAAGCGCAACCGGCAGCGGCCGGGGGCGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9096#1      CCGCCCACGCGTCCGCCCACGCGTCCGGGGTGCCTGTTTTGACAGGTACGCGGGGTGTTT 60
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      --------------------------GCCAGATCGGCCACGAGGNGTACGCGGGGTGTTT 34
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      ------------------------------------------------------------
                                                                                  

consensus_9096#1      GGTGGTGA-AGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACG 119
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      GGTGGTGACAGCAAAAACAGTGAAAAATACCGGCAAACGGTACAACACGGCAGGGAGACG 94
consensus_9096#3      ----------------AGAATCGCCCCGAGGNTGCAACGGTACAACACGGCAGGCAGACG 44
consensus_9096#0      --------------------CGAGGTAATACTGGCAACGGTACAACACGGCAGG-AGACG 39
                                                                                  

consensus_9096#1      ACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGT-GGTAGCTTTTTATAGTATT 178
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGTTGGTAGCTTTTTATAGTATT 154
consensus_9096#3      ACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCGCGT-GGTAGCTTTTTATAGTATT 103
consensus_9096#0      ACAGCAGCATGCACCACTGAAAAAGAAGCAGCATCCTGCGTGGTAGCTTTTTATAGTATT 99
                                                                                  

consensus_9096#1      GTTTTTCGAATTGCTCAATCGAAACCACCATGTG-GTGCTGCC-GGGCGGTTCGATACGC 236
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      GTTTTTCGAATTGCTCAATCGAAACCACCATGTG-GTGCTGCC-GGGCGGTTCGATACGC 212
consensus_9096#3      GTTTTTCGAATTGCTCAATCGAAACCACCATGTG-GTGCTGCC-GGGCGGTTCGATACGC 161
consensus_9096#0      GTTTTTCGAATTGCTCAATCGAAACCACCATGTGTGTGCTGCCTGGGCGGTTCGATACGC 159
                                                                                  

consensus_9096#1      CCCGAG-TGGAACGG--TCCGCCGTAC-GGCATCGAGCGATGC--------CAGCGCACA 284
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      CCCGAGGTGGAACGG--TCCGCCGTAC-GGCATCGAGCGATGC--------CAGCGCACA 261
consensus_9096#3      CCCGAG-TGGAACGG--TCCGCCGTAC-GGCATCGAGCGATGC--------CAGCGCACA 209
consensus_9096#0      CCCGAGTAGGAACTGGTCCTGCCGTACTGGCATCTGATGCTGATTGCCATGCTGCACATG 219
                                                                                  

consensus_9096#1      GAACGTCTGCCTCAGTCTCGTTAG-GAACCACGACAAGGAGAAC-TTTCTCTGCACGCTG 342
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      GAACGTCTGCCTCAGTCTCGTTAG-GAACCACGACAAGGAGAAC-TTTCTCTGCACGCTG 319
consensus_9096#3      GAACGTCTGCCTCAGTCTCGTTAG-GAACCACGACAAGGAGAAC-TTTCTCTGCACGCTG 267
consensus_9096#0      AACGTTCTGCCTCAGTCTCGTTAGTGAACCACGACAAGGAGAACCTTTCTTCTTGGACAA 279
                                                                                  

consensus_9096#1      CTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCC--GTGCGCGCCTTCAACGTGGAGG 400
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      CTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCC--GTGCGCGCCTTCAACGTGGAGG 377
consensus_9096#3      CTGCTGAAGAATCCGGAGCGGCGCAGCGCGCTGGCC--GTGCGCGCCTTCAACGTGGAGG 325
consensus_9096#0      CTAGCTTAGCCTTTGGCTTGAAATGGAAAATTCCCCTGGGGAAGGCCTGTGGCTGGCCAT 339
                                                                                  

consensus_9096#1      TGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCT 460
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      TGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCT 437
consensus_9096#3      TGGCGAAGGTGAGCGAGAAGGTGTCCGCCGGCAATGTGGGCGTGATGCCGCTCAAGTTCT 385
consensus_9096#0      GTGCTCTAGCCTGGCCTTTGGNGCCCCTGGTTGGCCNGCCCTGCCCCTTTCAAACGTGTT 399
                                                                                  

consensus_9096#1      GGGAGAACACCGTC-ACCACGCTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCG 519
consensus_9096#4      ----------------------------------CGGACGGGGACGCCCGCGCCGGGCCG 26
consensus_9096#2      GGGAGAACACCGTCGACCACGCTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCG 497
consensus_9096#3      GGGAGAACACCGTC-ACCACGCTGTACCGGCCGCCGGACGGGGACGCCCGCGCCGTGCCG 444
consensus_9096#0      GGGGAACGGTGGTTGGGCCAGGACAAGTGTTNGACTGCCTGGAAACAGAACAGTGGTTTG 459
                                                        * * * ** *      *   *    *

consensus_9096#1      GACCATCCCGTC-ATCCGCGAGCTGC-ACCGGGCGGTCCG---CGAGCAC-AAGCTGTCC 573
consensus_9096#4      GACCACCCCGTC-ACCCGCGAGCGGC-ACCGGGCGAACCG---CGAGCAC-AAGCGGGCC 80
consensus_9096#2      GACCATCCCGTC-ATCCGCGAGCTGCGACCGGGCGGTCCG---CGAGCANCAAGCTGTCC 553
consensus_9096#3      GACCATCCCGTC-ATCCGCGAGCTGC-ACC------------------------------ 472
consensus_9096#0      GTTCCCCTGGCCCGGTGGCAAATTTGGTTTGCGTCGGCCGGTTTGATTGCCCTGGCATTC 519
                      *  *  *  * *     ** *                                       

consensus_9096#1      AAGCG----CTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACTCGAACCT----GCACT 625
consensus_9096#4      AAGCG----CAACCGGCAGCGGCCGGGGGCGGC--------------------------- 109
consensus_9096#2      AAGCG----CTACCTGCAGCGGCTGGTGGCGGCGCGGGCCAACGTCGAACCTG--GCACT 607
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      AAGAGGTTTTCCCTTGGGGGGGACAGGAAAACCAAACACCTGATACAACCCCAACGGACC 579
                                                                                  

consensus_9096#1      TCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCAGGCGGTGGCGA---GCGTGCTCT 682
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      TCGTCACGGTGAAGCAGCTGGAGGACTACGCGGAGCAGGCGGTGGCGAAGCGTGCTCGTA 667
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      TTGGTTAACCCGGGGCCCCGGCCCCGGGNGGGAACCGGTCGGGGGGGAAACCTCNGCCCC 639
                                                                                  

consensus_9096#1      ACCTGCTGCTCGAGGTGCACGGCACGCGCAACGTGCACTGCGACCATGCCGCG-TCCCAT 741
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      CCTGCTGCGTCGAGGTGCACGGCACGCGCAACGTGCACTGGGANCATGCCGGGGTCCCAT 727
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      CCACGCGGACCCTGGCCCCCCCTGGTTTGGGCCCCCATGTTGTGGAAACCCAAAGTTTTC 699
                                                                                  

consensus_9096#1      CTCGGCAAGGCGCAGGGCATCGTGAACCTGCTTCGCTCGATACCGTACCAGA-------- 793
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      CTCGGGAAGGCGGCAAGGGCATCGTGNGAC------------------------------ 757
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      CCACCCTGGGTTTACCAAACTTTTCCCCCAGGGGCCGCGAAAGCGACCCACTATTGGNAA 759
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      AAAACCCCTCTGNGAGCGGCACTCGGAGCGATCCCACCGGANCAGCGGAAANGGACCACA 819
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      CCCANAATGGGCCTTTGGTTTCCCCCCAAACAACGGGGCCTGAGCCTTTTAAAACCCCTT 879
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      TTGGCCGAAGGCCTACGGAGGGGCGACTTTGAGGCGCTCATTGGTGGGCACTCGGGAGNG 939
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      GCTNGGCCCTGGGTGTNGGGCCCCCCAAAAAAACTTTCCCGGGNATAAAACNCCCCTTTA 999
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      TGACNACCAACCCTTCTTTCTATTCCCGGGTTCCTCCNAAACACGGCAGGTGTNTATGTN 1059
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      GGGAAAACAACGGCCCCCAACACAGCTGCCCATTTGTTGGCCCAANAANGTGTGGTGGAA 1119
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      ACNACCATTATAAACNCCCNGGCCACCTCCTGGGTGGTGTAAANAGTGTGCGCCCAAAAC 1179
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      GTGTGGTGTCCCGTACGAGTTAGGATATATGAGGTGGTGTGCGCCATGCGTGAAACNAGG 1239
                                                                                  

consensus_9096#1      ------------------------------------------------------------
consensus_9096#4      ------------------------------------------------------------
consensus_9096#2      ------------------------------------------------------------
consensus_9096#3      ------------------------------------------------------------
consensus_9096#0      GCACCACCGTGGGATGTTATCTGTGTCCACCATNCTCCCCATTTATAAACCCCCCCATAT 1299
                                                                                  

consensus_9096#1      ------------------------
consensus_9096#4      ------------------------
consensus_9096#2      ------------------------
consensus_9096#3      ------------------------
consensus_9096#0      TTTTGTGGCGNCACTGTTGTAGGG 1323
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)