These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9107#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 988 fasta sequence [GTGCGTGTGTGTGTGTGCGCAAAGGTTTCTCCGTTTGGACGC-TGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGG-AAGGCGCCCCGATCATTCCGATTTCCG-CCCAGCTCAAGTACAACAACACACACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTTGTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGACAGAGGCGGAAGCATCATTCATCTTTAATCGCCGGCGCCGTGAATTCAATCCCAGATGGCTTAAGTCCAGTGGACAAGTTTTATTCATCCCCGAAGGAGC] [+] EMBL CNS08II2 [GTGCGTGTGTGTGTGTGCGCAAAGGTTTCTCCGTTTGTTCGC TGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATCTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATAGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGG AAGGCGCCCCGATCATTCCGATTTCCG CCCAGCTCAAGTACAACAACACACACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTTGTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGACAGAGG ] [+] EMBL BM620430 [ ccgcGGACGCGTGG GTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCA ] [+] EMBL BM576461 [ ccgCGC TGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGA ] [+] EMBL BM596565 [ ccgATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGAT ] [+] EMBL BM577334 [ cCGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAG ] [+] EMBL BM617982 [ ccgGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGGAAAGGCGCCCCGATCATTCCGATTTCCGCCCCAGCTCAAGTACAACAt ] [-] EMBL CNS08II3 [ AGATCTACAAGTGCGACAACCCGAAAATCCTCCGGCCAACGTGCTTTACGTCCGGTGGGTCGAGAAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGTTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATAGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGG AAGGCGCCCCGATCATTCCGATTTCCG CCCAGCTCAAGTACAACAAAAAAAACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTTGTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGAGCGAAGCGGAAGCATCATTCATCTTTAATCGCCGGCGCCGTGAATTCAATCCCAGATGGCTTAAGTCCAGTGGACAAGTTTTATTCATCCCCGAAGGAGC] consensusID : consensus_9107#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence [CCGCTCGGCGTAAGGGTCAATCGGAGTTTTCCTCGTATTGCGCTACTCAGTGCTATCGTGTTTTTAGTCTTGCGAGGATTTGAGTGAAAGCGCTCAGCTAGCACCTGCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTTAGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATCGAGAAGGATAACGCGCAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAACCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACCTGACCAAGCGTCTGGAGCAGGTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCTACCAAGGACAGCGAGGAGAAGGACAAGCTGCTCACCTCGACCGAGGCGAACGTGGCCGCCCTGACCCGCAAGGTTCAGCAGGTTGAGGAGGATCTGGAAAAGTCTGAGGAACGTTCGTCCGCCGCGCTGTCCAAGCTGCTGGAGGCTACCCAGTCGGCTGATGAGAACAACCGTATGTGCAAAGTGTTGGAGAACCGTTCCCAGCAGGATGAGGAGCGTATGGATCAGCTGTCCAACCAGCTGAAGGAGGCGCGTATGCTCGCTGAAGACGCCGATACCAAGTCCGACGAGGTGTCCCGCAAGCTGGCCTTCGTTG] [+] EMBL BM654363 [CCGCTCGGCGTAAGGGTCAATCGGAGTTTTCCTCGTATTGCGCTACTCAGTGCTATCGTGTTTTTAGTCTTGCGAGGATTTGAGTGAAAGCGCTCAGCTAGCACCTGCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTTAGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATCGAGAAGGATAACGCGCAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAACCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACCTGACCAAGCGTCTGGAGCAGGTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCTACCAAGGACAGCGAGGAGAAGGACAAGCTGCTCACCTCGACCGAGGCGAACGTGGCCGCCCTGACCCGCAAGGTTCAGCAGGTTGAGGAGGATCTGGAAAAGTCTGAGGAACGTTCGTCCGCCGCGCTGTCCAAGCTGCTGGAGGCTACCCAGTCGGCTGATGAGAACAACCGTATGTGCAAAGTGTTGGAGAACCGTTCCCAGCAGGATGAGGAGCGTATGGATCAGCTGTCCAACCAGCTGAAGGAGGCGCGTATGCTCGCTGAAGACGCCGATACCAAGTCCGACGAGGTGTCCCGCAAGCTGGCCTTCGTTG] consensusID : consensus_9107#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 689 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGCAAAGGTTTCTCCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATC] [+] EMBL BM616428 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGCAAAGGTTTCTCCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATC] [+] EMBL BM598429 [ ccgGCGCAAAGGTTTCTCCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGACCGGTGCCGCGGTGATGGACGCCGCCCTGC TGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCC ] [+] EMBL BM596857 [ ccgCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGG ] consensusID : consensus_9107#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 683 fasta sequence [CCGCGGACGCGTGGGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGC] [+] EMBL BM593602 [CCGCGGACGCGTGGGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGC] [+] EMBL BM624835 [ GCCATCTCCGGTGTCCAGACGGGTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCC ] consensusID : consensus_9107#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence [TCGCCCCAGGNGAACGAGTCGTGTGACTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCTACATCCGCCTGTTGCTGATAAGCACAAACGAATCGAACGCGGTTTTTTGGTTATGAGTTGGACGATGATTTCGAAATTTAAAACGAACTCTTAACATAAGTGTTGTGTACGTGTGTGTGTTGTCCTAATGCTCGCGGCATTAATACTGTTTTCCACGGTTCGCACTACACTTTCATTTTGATTTTTACATCCTATCCAAACACAATATCATTTAGCTGGTAAGAGAACACACTGCTAAGAGCGCATTAACACTAACCCCCGCTATTAACGCTAATGAGATTAACCTTTTTGTTTTTATTCGTAATGTTTATTTGAACTACTATTTTCCCTGTTAGGATCGATTGCTTGTTCGATCCTATTCGAAAGGGAACTTGTGAGAGAGGGAAGATTTGTTTGTCGATGGTACCCAAAGCATTACTGCGCTTACATGCAACTTTGAAGAAGCCGAATATAACAACTGTAAAAGAGCAGTTGCAGCTAAGAAAAGCTATCCAGGAATGCAGCTTCGTGTTAACACACAGAGCCTTTTTTCCTACATCGGTCCTCCACCGATGAGA] [+] EMBL AL933437 [TCGCCCCAGGNGAACGAGTCGTGTGACTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCTACATCCGCCTGTTGCTGATAAGCACAAACGAATCGAACGCGGTTTTTTGGTTATGAGTTGGACGATGATTTCGAAATTTAAAACGAACTCTTAACATAAGTGTTGTGTACGTGTGTGTGTTGTCCTAATGCTCGCGGCATTAATACTGTTTTCCACGGTTCGCACTACACTTTCATTTTGATTTTTACATCCTATCCAAACACAATATCATTTAGCTGGTAAGAGAACACACTGCTAAGAGCGCATTAACACTAACCCCCGCTATTAACGCTAATGAGATTAACCTTTTTGTTTTTATTCGTAATGTTTATTTGAACTACTATTTTCCCTGTTAGGATCGATTGCTTGTTCGATCCTATTCGAAAGGGAACTTGTGAGAGAGGGAAGATTTGTTTGTCGATGGTACCCAAAGCATTACTGCGCTTACATGCAACTTTGAAGAAGCCGAATATAACAACTGTAAAAGAGCAGTTGCAGCTAAGAAAAGCTATCCAGGAATGCAGCTTCGTGTTAACACACAGAGCCTTTTTTCCTACATCGGTCCTCCACCGATGAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9107#0 ------------------------GTGCGTGTGTGTGTGTGCGCAAAGGTTTCTCCGTTT 36 consensus_9107#3 ------------------------------------------------------------ consensus_9107#2 CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGCAAAGGTTTCTCCGTTT 60 consensus_9107#1 -----------------------CCGCTCGGCGTAAGGGTCAATCGGAGTTTTCCTCGTA 37 consensus_9107#4 ---------------------------------------------------TCGCCCCAG 9 consensus_9107#0 GGACGCTGG-CTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCA 95 consensus_9107#3 ---------------------------CCGCGGACGCGTGGGCGTGAATCAAGCCGACCA 33 consensus_9107#2 GTTCGCTGG-CTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCA 119 consensus_9107#1 TTGCGCTACTCAGTGCTATCGTGTTT-TTAGTCTTGCGAGGATTTGAGTGAAAGCGCTCA 96 consensus_9107#4 GNGAACGAG-TCGTGTGACTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCT 68 * ** * * consensus_9107#0 GGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGG----GCAGCCCCACCTA 151 consensus_9107#3 GGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGG----GCAGCCCCACCTA 89 consensus_9107#2 GGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGG----GCAGCCCCACCTA 175 consensus_9107#1 GC-TAGCACCTGCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTT 155 consensus_9107#4 ACAT-CCGCCTGTTGCT-GATAAGCACAAACGAATCGAACGCG----GTTTTTTGGTTAT 122 * * * * ** * * consensus_9107#0 CAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGT- 210 consensus_9107#3 CAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGT- 148 consensus_9107#2 CAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGT- 234 consensus_9107#1 AGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATC 215 consensus_9107#4 GAGTTGGACGATGATTTCGAAATTTA---AAACGAACTCTTAACATAAGTGTTGTGTAC- 178 * * * * ** * * * * * * * * consensus_9107#0 ------GATATCGCGACAGGCTACTATTAACATCGGTACCATC--GGCCATGTAG-CGCA 261 consensus_9107#3 ------GATATCGCGACAGGCTACTATTAACATCGGTACCATC--GGCCATGTAG-CGCA 199 consensus_9107#2 ------GATATCGCGACAGGCTACTATTAACATCGGTACCATC--GGCCATGTAG-CGCA 285 consensus_9107#1 GAGAAGGATAACGCG-CAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAA 274 consensus_9107#4 ---GTGTGTGTGTTGTCCTAATGCTCGCGGCATTAATACTGTT--TTCCACGGTT-CGCA 232 * * * ** * * * ** * consensus_9107#0 CG-GTAAATCGACAG--TCGTGAAGGCCATCTCCGG--TGTCCAGACGGTTCGTTTCAAG 316 consensus_9107#3 CG-GTAAATCGACAG--TCGTGAAGGCCATCTCCGG--TGTCCAGACGGTTCGTTTCAAG 254 consensus_9107#2 CG-GTAAATCGACAG--TCGTGAAGGCCATCTCCGG--TGTCCAGACGGTTCGTTTCAAG 340 consensus_9107#1 CCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACCTGACCAAGCGTCTGGAGC--AG 332 consensus_9107#4 CT-ACACTTTCATTTTGATTTTTACATCCTATCCAA--ACACAATATCATTTAGCTGGTA 289 * * * * * ** * * * consensus_9107#0 AACGAACTGGAGCGTAACA---TTACAATTAAACTGGGTTACGCTAACGCGAAGATTTAC 373 consensus_9107#3 AACGAACTGGAGCGTAACA---TTACAATTAAACTGGGTTACGCTAACGCGAAGATTTAC 311 consensus_9107#2 AACGAACTGGAGCGTAACA---TTACAATTAAACTGGGTTACGCTAACGCGAAGATTTAC 397 consensus_9107#1 GTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCTACCAAGGACAGCGAG 392 consensus_9107#4 AGAGAACACACTGCTAAGA---GCGCATTAACACTAACCCCCGCTATT---AACGCTAAT 343 * * * * * * **** * * consensus_9107#0 AAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAG 433 consensus_9107#3 AAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAG 371 consensus_9107#2 AAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAG 457 consensus_9107#1 GAGAAGGACAAGCTG--CTCACCTCGACCGAGGCGAAC-GTGGCCGCCCTGACCCGCAAG 449 consensus_9107#4 GAGATTAACCTTTTTGTTTTTATTCGTAATGTTTATTTGAACTACTATTTTCCCTGTTAG 403 ** ** * ** * * * ** consensus_9107#0 GA-CGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCA 492 consensus_9107#3 GA-CGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCA 430 consensus_9107#2 GA-CGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCA 516 consensus_9107#1 GTTCAGCAGGTTGAGGAGGATCTGGAAAA---GTCTGAGGAACGTTCGTCCGCCGCGCTG 506 consensus_9107#4 GATCGATTGCTTGT--TCGATCCTATTCG-----AAAGGGAACTTGTGAGAGAGGGAAGA 456 * * * ** * * * * * * consensus_9107#0 CGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGC-TGAACGGTG 551 consensus_9107#3 CGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGC-TGAACGGTG 489 consensus_9107#2 CGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGC-TGAACGGTG 575 consensus_9107#1 TCCAAGCT--GCTGGAGGCTACCCAGTCGGC-TGATGAGAACAACCGTATGTGCAAAGTG 563 consensus_9107#4 TTTG---TTTGTCGATGGTACCCAAAGCATTACTGCGCTTACATGCAACTTTGAAGAAGC 513 * * * * * * ** * ** * consensus_9107#0 CCGCGGTGATGGACGCCGCCCTGCT-GCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCG 610 consensus_9107#3 CCGCGGTGATGGACGCCGCCCTGCT-GCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCG 548 consensus_9107#2 CCGCGGTGATGGACGCCGCCCTGCTTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCG 635 consensus_9107#1 TTGGAGAACCGTTCCCAGCAGGATGAGGAGCGTATGGATCAGCTGTCCAACCAGCTGAAG 623 consensus_9107#4 CGAATATAACAACTGTAAAAGAGCA-----GTTGCAGCTAAGAAAAGCTATCCAGGAATG 568 * * * * * * consensus_9107#0 CAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTG 670 consensus_9107#3 CAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTG 608 consensus_9107#2 CAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATC------ 689 consensus_9107#1 GAGGCGCGTATGC---TCGCTGAAGACGCCGATACCAAGTCCGACGAGGTGTCCCGCAAG 680 consensus_9107#4 CAGCTTCGTGT--------TAACACACAGAGCCTTTTTTCCTACATCGGTCCTCCACCGA 620 * * * * consensus_9107#0 CAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTG 730 consensus_9107#3 CAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTG 668 consensus_9107#2 ------------------------------------------------------------ consensus_9107#1 CTGGCCTTCGTTG----------------------------------------------- 693 consensus_9107#4 TGAGA------------------------------------------------------- 625 consensus_9107#0 AAGTTCGTGCAGGGCACGGTGGCGGAAGGCGCCCCGATCATTCCGATTTCCGCCCAGCTC 790 consensus_9107#3 AAGTTCGTGCAGGGC--------------------------------------------- 683 consensus_9107#2 ------------------------------------------------------------ consensus_9107#1 ------------------------------------------------------------ consensus_9107#4 ------------------------------------------------------------ consensus_9107#0 AAGTACAACAACACACACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTT 850 consensus_9107#3 ------------------------------------------------------------ consensus_9107#2 ------------------------------------------------------------ consensus_9107#1 ------------------------------------------------------------ consensus_9107#4 ------------------------------------------------------------ consensus_9107#0 GTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGACAGAGGCGGAAGCATCATTCAT 910 consensus_9107#3 ------------------------------------------------------------ consensus_9107#2 ------------------------------------------------------------ consensus_9107#1 ------------------------------------------------------------ consensus_9107#4 ------------------------------------------------------------ consensus_9107#0 CTTTAATCGCCGGCGCCGTGAATTCAATCCCAGATGGCTTAAGTCCAGTGGACAAGTTTT 970 consensus_9107#3 ------------------------------------------------------------ consensus_9107#2 ------------------------------------------------------------ consensus_9107#1 ------------------------------------------------------------ consensus_9107#4 ------------------------------------------------------------ consensus_9107#0 ATTCATCCCCGAAGGAGC 988 consensus_9107#3 ------------------ consensus_9107#2 ------------------ consensus_9107#1 ------------------ consensus_9107#4 ------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||