These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9111#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 809 fasta sequence [CAATGAACCCGGCTACTACAAGGACGGTCAGTTTGGTATTCGCATCGAGGACATCGTGCAGGTGGTGACGGCCAACGTGGGTACCAACTTTGATGGGCGCGGCGCACTCACCTTCCGCACGATAACCATGTGTCCGATCCAGACGCGGCTGATTGATGTCACACTGCTGACTGCGAAGGAGCGCGACCATTTGAATGCGTACCATCAAACTGTGCTCGATACGCTTGGGCCTCTTCTACACGAAACAAACGA-TCTGGACACGCTCGCCTGGCTAGAGCGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCG-ATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACGGGTA---GT--TACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAATAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACGCTGATGGCCTTCCATTCGCTTGTCTTAGAAGTACGAAAATAAATCAAATTTTGATTTGAATCAAAAT] [+] EMBL BX609862 [CAATGAACCCGGCTACTACAAGGACGGTCAGTTTGGTATTCGCATCGAGGACATCGTGCAGGTGGTGACGGCCAACGTGGGTACCAACTTTGATGGGCGCGGCGCACTCACCTTCCGCACGATAACCATGTGTCCGATCCAGACGCGGCTGATTGATGTCACACTGCTGACTGCGAAGGAGCGCGACCATTTGAATGCGTACCATCAAACTGTGCTCGATACGCTTGGGCCTCTTCTACACGAAACAAACGA TCTGGACACGCTCGCCTGGCTAGAGCGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCG ATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACAACTACCCGTACTACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGTTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAAGAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACACTGATGGCCTCCCATTCGCTTGTCCTAGAAGTACGAAAATAAATCGAA ] [+] EMBL BX613592 [ ATGTGTCCGATCCAGACGCGGCTGATTGTTGTCACACTGCTGACTGCGAAGGAGCGCGACCATTTGAATGCGTACCATCAAACTGTGCTCGATACGCTTGGGCCTCTTCTACGCGAAACAAACGA TCTGGACACGCTCGCCTGGCTAGAGCGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCG ATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACAACTACCCGTACTACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGTTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAAGAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACACTGATGGCCTTCCATTCGCTTGTCCTAGAAGTACGAAAATAAATCGAATTTTGATTTGAATCAAAAT] [+] EMBL BX620821 [ cggcACGAGGCTGTTCACGCTCGCCTGGCTAGAGCGTGAAACGAANGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCG ATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACGGGTA GT TACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAATAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACGCTGATGGCCTTCCATTCGCTTGTCTTAGAAGTACGAAAATAAATCAAATTTTGATTTGAATCAAA ] [+] EMBL BM646510 [ ccgGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCG ATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACGGGTA GT TACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAATAAACAATTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATG ] [+] EMBL BX620713 [ GGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCG ATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACGGGTA GT TACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAATAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACGCTGATGGCCTTCCATTCGCTTGTCTTAGAAGTACGAAAATAAATCAAATTTTGATTTG ] [+] EMBL BX620976 [ AAAAGTGCATGTGTAGGGCAGGCGAGTANGGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCGNGTAATACCNTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACGGGTA GT TACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAANGAGTTGTGGAAACTGAATAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTANGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACGCTGATGGCCTTCCATTCGCTTGTCTTAGAAGTACGAAAATAAANCAAATTTTGATTTGAATCAAA ] consensusID : consensus_9111#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence [GGCAGAATCGCCACGAGGTCAGGCTACTACAAGGACGGCCAGTTTGGTATTCGCATCGAGGACATCGTGCAGGTGGTGACGGCCAATGTGGGTACCAACTTTGATGGGCGCGGCGCACTCACCTTCCGCACGATAACCATGTGTCCGATCCAGACGCGGCTGATTGATGTCACACTGCTGACTGCGAAGGAGCGCGACCATTTGAATGCGTACCATCAAACTGTGCTCGATACGCTTGGGGCCTCTTCTACGGCGAAACAAACGATCTGGACACGCTCGCCTGGCTAGAGCGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCGATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACGGGTAGTTACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGANTAANCAAGTGATCTCACTGGTT] [+] EMBL BX467831 [GGCAGAATCGCCACGAGGTCAGGCTACTACAAGGACGGCCAGTTTGGTATTCGCATCGAGGACATCGTGCAGGTGGTGACGGCCAATGTGGGTACCAACTTTGATGGGCGCGGCGCACTCACCTTCCGCACGATAACCATGTGTCCGATCCAGACGCGGCTGATTGATGTCACACTGCTGACTGCGAAGGAGCGCGACCATTTGAATGCGTACCATCAAACTGTGCTCGATACGCTTGGGGCCTCTTCTACGGCGAAACAAACGATCTGGACACGCTCGCCTGGCTAGAGCGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCGATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACGGGTAGTTACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGANTAANCAAGTGATCTCACTGGTT] consensusID : consensus_9111#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 638 fasta sequence [CCGGGCGGTAGCGGTACCGCAGCACCGCCGTCAGCACCAAACCATCTAGCGGATGTTCCGTCAACGCTGTTCGCCACGGTGTAAACGTTTCCCTGCATTGTGACGCTGGACATTGGTTTCATACTGTGACGAGTAATTCGCTAATGATTTTCCTCTCTTCTACTTCCATTGTTTGCTTGTAGAACGATCCCAAGATGAGTACTGCAACGATTCGTACCCGTCGCTACATGAGCAACCGGCTGCTGTGCCGCAAGCAGATGGTCTGCGACGTCCTCCACCCTGGCCTCGCCTCGGTCTCGAAGAAGGAGATCCGCGAGAAGCTCGCCGTCATGTACAAAACCACGCCGGACGTCGTGTTCGTGTTCGGTTTCCGCACGAACTTCGGTGGCGGCAAGTCGACCGGTTTCGCCCTCATCTACGACACCCTGGACCACGCCAAGAAGTTCGAGCCCAAGCACCGTCTCGGCCGCCACGGACTGTACGAGAAGAAGAAGATGACGCGCAAGCAGCGCAAGGAGCGCAAGAACCGTATGAAGAAGGTGCGCGGCACGAAGAAGGCCAAGGTCGGACAGGCCGTCAAGAAGTAAAACGGCGGAACGGTGATGGTGCCGTCGCTGCTGCTGCTGCTGCTGCCACGG] [+] EMBL BM584768 [CCGGGCGGTAGCGGTACCGCAGCACCGCCGTCAGCACCAAACCATCTAGCGGATGTTCCGTCAACGCTGTTCGCCACGGTGTAAACGTTTCCCTGCATTGTGACGCTGGACATTGGTTTCATACTGTGACGAGTAATTCGCTAATGATTTTCCTCTCTTCTACTTCCATTGTTTGCTTGTAGAACGATCCCAAGATGAGTACTGCAACGATTCGTACCCGTCGCTACATGAGCAACCGGCTGCTGTGCCGCAAGCAGATGGTCTGCGACGTCCTCCACCCTGGCCTCGCCTCGGTCTCGAAGAAGGAGATCCGCGAGAAGCTCGCCGTCATGTACAAAACCACGCCGGACGTCGTGTTCGTGTTCGGTTTCCGCACGAACTTCGGTGGCGGCAAGTCGACCGGTTTCGCCCTCATCTACGACACCCTGGACCACGCCAAGAAGTTCGAGCCCAAGCACCGTCTCGGCCGCCACGGACTGTACGAGAAGAAGAAGATGACGCGCAAGCAGCGCAAGGAGCGCAAGAACCGTATGAAGAAGGTGCGCGGCACGAAGAAGGCCAAGGTCGGACAGGCCGTCAAGAAGTAAAACGGCGGAACGGTGATGGTGCCGTCGCTGCTGCTGCTGCTGCTGCCACGG] consensusID : consensus_9111#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence [CCGCGGACGCGTGGGGTTTGGCTGATGCCGACTACAAGATCGTGGCTCACAAGGTTGTGCCGTGGTTCGCGCACCAGCTGCGTGAAGCCGTCAAGGCTGGTGACAGCGTGAAGGTGCAGGTGTACATCCGCTGTCTTGGACATTTGGGACACCCCGAGATCCTGAACGTTTTCGAACCGTACCTGGAAGGCAAGATCCCAGTGACCCACTTCCAGCGTCTGGCTTTCATTGTCGCTCTGGACCGTCTGGTCGAGAACTACCCGCGTCTGGCTCGCTCTGTGCTGTTCAAGGTGTACCAGAACACCGGAGATGCCCATGAGGTCCGTTGTGCCGCAGTGTACCTGCTGATCCGCACGAAGCCCCCGGTATACATGCTCCAGCGTATGGCTGAGCAGACCCACTACGACCCGAGCACGTACGTCCGCGCTGCCGTCAAGACCGCTCTGGAGAGCGCTTCCGAGGCTGATGAGTTTGATGATGATTACGAGTTCTCCCAGAACGCACAGGCCGCTGTCAAGCACCTGAACCCCCGTGACTTTAGCCTGCAGTACTCTGGCACTTTCCTGCGTGATTTTGCCTTCAAGGAGCTTGAGCTCTCGTACCGCATGTACTTCTCCCAGATCGCTGCTGAC] [+] EMBL BM614978 [CCGCGGACGCGTGGGGTTTGGCTGATGCCGACTACAAGATCGTGGCTCACAAGGTTGTGCCGTGGTTCGCGCACCAGCTGCGTGAAGCCGTCAAGGCTGGTGACAGCGTGAAGGTGCAGGTGTACATCCGCTGTCTTGGACATTTGGGACACCCCGAGATCCTGAACGTTTTCGAACCGTACCTGGAAGGCAAGATCCCAGTGACCCACTTCCAGCGTCTGGCTTTCATTGTCGCTCTGGACCGTCTGGTCGAGAACTACCCGCGTCTGGCTCGCTCTGTGCTGTTCAAGGTGTACCAGAACACCGGAGATGCCCATGAGGTCCGTTGTGCCGCAGTGTACCTGCTGATCCGCACGAAGCCCCCGGTATACATGCTCCAGCGTATGGCTGAGCAGACCCACTACGACCCGAGCACGTACGTCCGCGCTGCCGTCAAGACCGCTCTGGAGAGCGCTTCCGAGGCTGATGAGTTTGATGATGATTACGAGTTCTCCCAGAACGCACAGGCCGCTGTCAAGCACCTGAACCCCCGTGACTTTAGCCTGCAGTACTCTGGCACTTTCCTGCGTGATTTTGCCTTCAAGGAGCTTGAGCTCTCGTACCGCATGTACTTCTCCCAGATCGCTGCTGAC] consensusID : consensus_9111#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence [AAGTAAATGGTATTGTTGCTTATATTCTCATTCCTTTTGAGCGGAATGTTTTCCATTTTTCCGCACAAGAGAAAACATATAAACTTAAAACACGGACCGCCTGAGGACACGCGGCCACCACTTCTACTGCGACAACAACCGTGGCAGCAGCAGCAGCAGCTACGGCACCATCACCGTTCCGCCGTTTTACTTCTTGACGGCCTGTCCGACCTTGGCCTTCTTCGTGCCGCGCACCTTCTTCATACGGTTCTTGCGCTCCTTGCGCTGCTTGCGCGTCACCTTCTTCTTCTCGTACAGTCCGTGGCGGCCGAGACGGTGCTTGGGCTCGAACTTCTTGGCGTGGTCCAGGGTGTCGTAGATGAGGGCGAAACCGGTCGACTTGCCGCCACCGAAGTTCGTGCGGAAACCGAACACGAACACGACGTCCGGCGTGGTTTTTTACATGACGGCGAGCTTCTCGCGGATCTCCTTCTTCGAGACCGAGGCGAGGCCAGGGTGGAGGACGTCGCAAACATCTGCTTGCGGCACAGCAGCGGGTTGCTCATGTAGCGACGGGTACGAATCGTTGCAGTTCTCATCTTGGGATCGTTCTTCCAGTAGGCCAACAG] [+] EMBL CNS08WDQ [AAGTAAATGGTATTGTTGCTTATATTCTCATTCCTTTTGAGCGGAATGTTTTCCATTTTTCCGCACAAGAGAAAACATATAAACTTAAAACACGGACCGCCTGAGGACACGCGGCCACCACTTCTACTGCGACAACAACCGTGGCAGCAGCAGCAGCAGCTACGGCACCATCACCGTTCCGCCGTTTTACTTCTTGACGGCCTGTCCGACCTTGGCCTTCTTCGTGCCGCGCACCTTCTTCATACGGTTCTTGCGCTCCTTGCGCTGCTTGCGCGTCACCTTCTTCTTCTCGTACAGTCCGTGGCGGCCGAGACGGTGCTTGGGCTCGAACTTCTTGGCGTGGTCCAGGGTGTCGTAGATGAGGGCGAAACCGGTCGACTTGCCGCCACCGAAGTTCGTGCGGAAACCGAACACGAACACGACGTCCGGCGTGGTTTTTTACATGACGGCGAGCTTCTCGCGGATCTCCTTCTTCGAGACCGAGGCGAGGCCAGGGTGGAGGACGTCGCAAACATCTGCTTGCGGCACAGCAGCGGGTTGCTCATGTAGCGACGGGTACGAATCGTTGCAGTTCTCATCTTGGGATCGTTCTTCCAGTAGGCCAACAG] consensusID : consensus_9111#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 604 fasta sequence [CTCCTTCGCAGTCAGCAGTGTGACCATTTGAATGCGTACCATCAAACTGTGCTCGATACGCTTGGGCCTCTTCTACGCGAAACAAACGATCTGGACACGCTCGCCTGGCTAGAGCGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCGATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACAACTACCCGTACTACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGTTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAAGAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACACTGATGGCCTTCCATTCGCT] [+] EMBL BX623157 [CTCCTTCGCAGTCAGCAGTGTGACCATTTGAATGCGTACCATCAAACTGTGCTCGATACGCTTGGGCCTCTTCTACGCGAAACAAACGATCTGGACACGCTCGCCTGGCTAGAGCGTGAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGTGTAGGGCAGGCGAGTAACGAGCATAGGGATGGCCAGCGCCTGAGTCACTGGCTTCCAAGCGCACGAGAAGCGACAAACGTGTGCAGCCGATAATACCGTACTTTGGCGTGTACAACGACCCACTTTGAGGTCGGAAAAGGCCAAAATCAGATTCAGGGGGTCGTGTTATGCACAACTACCCGTACTACTTTTCGATTACACCTGAGACATTACATCCGATCACAAACAAAGACAGTCTCGTGCATGGTTATCCACAAAGACACAAGGAAAGAGTTGTGGAAACTGAAGAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGGAACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGGTAAACACTGATGGCCTTCCATTCGCT] consensusID : consensus_9111#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence [CCGCCCACGCGTCCGGACTAGTTCTAGATCGCTTCTAGATCGCGAGGGCCGCCTTTTTTTTTTTTTTTGCCATTAAGTCGGGTAGATGGTTTATTGTTATGACGCATCGTGTAGTTTATTTAAATTAATCTCCTTCACATTTTCTTGCTAAAAGTGAAAACAAATCGTTTAACCGAGTTCGTCGCTTAGCGCTTAACCCCGTTTAGAGCAGAGTCTTTAGCCGCTCACCGGACAAAAACCATTCGCCCATCCGTTCCCTGCATAATGGGCGACATCTTGGCCACGTACCGCTCGAACACGTCAATGTCCAGTGGGCCAACGCGCACGTTGGTGCGATGCTGCCCGAACATAGTGTACCCGTTGCCACCGCTGCCAATCCACGCCGCAATCGCAATCCGATAGGTAGCGTTCACGTCCAGCGGCTCGTAGCGCGGAATCCGGCACACCCGGCACCGCACATCCACACGCTGGACGCGCTGCAAGGCAGGGCGCGTCAGGTTGAAGACGACACGCAGCCCCGCGAACTGCAGCACGTC] [+] EMBL BM585479 [CCGCCCACGCGTCCGGACTAGTTCTAGATCGCTTCTAGATCGCGAGGGCCGCCTTTTTTTTTTTTTTTGCCATTAAGTCGGGTAGATGGTTTATTGTTATGACGCATCGTGTAGTTTATTTAAATTAATCTCCTTCACATTTTCTTGCTAAAAGTGAAAACAAATCGTTTAACCGAGTTCGTCGCTTAGCGCTTAACCCCGTTTAGAGCAGAGTCTTTAGCCGCTCACCGGACAAAAACCATTCGCCCATCCGTTCCCTGCATAATGGGCGACATCTTGGCCACGTACCGCTCGAACACGTCAATGTCCAGTGGGCCAACGCGCACGTTGGTGCGATGCTGCCCGAACATAGTGTACCCGTTGCCACCGCTGCCAATCCACGCCGCAATCGCAATCCGATAGGTAGCGTTCACGTCCAGCGGCTCGTAGCGCGGAATCCGGCACACCCGGCACCGCACATCCACACGCTGGACGCGCTGCAAGGCAGGGCGCGTCAGGTTGAAGACGACACGCAGCCCCGCGAACTGCAGCACGTC] consensusID : consensus_9111#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 303 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCTTTGGAAGCGGACAACAGAATGGAGGCATTCCTTCCCTCGGCAACGGACAGGGACAGAGCGGATTCCCGAGCTTCGAAAACGGTCAACAGGGTGGAAACTTCCCGTTCTTCGGTTAAAGTGCTCGTCTAAGCTAAATATTATTGAAAATTGAAGATGGAACATCGATAGAGAAACTAAATTTGTGGAAAAAAAACTATATCAGCTTTTACATCGAATATAAATATCAGGCGATTAAAATAAATGTAGTGTATTGGAATGCGAAAAAAAAAA] [+] EMBL BM634270 [CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCTTTGGAAGCGGACAACAGAATGGAGGCATTCCTTCCCTCGGCAACGGACAGGGACAGAGCGGATTCCCGAGCTTCGAAAACGGTCAACAGGGTGGAAACTTCCCGTTCTTCGGTTAAAGTGCTCGTCTAAGCTAAATATTATTGAAAATTGAAGATGGAACATCGATAGAGAAACTAAATTTGTGGAAAAAAAACTATATCAGCTTTTACATCGAATATAAATATCAGGCGATTAAAATAAATGTAGTGTATTGGAATG ] [+] EMBL CF542049 [ ttcCGAGCTTTGGAAGCGGACAACAGAATGGAGGCATTCCTTCCCTCGGCAACGGACAGGGACAGAGCGGATTCCCGAGCTTCGAAAACGGTCAACAGGGTGGAAACTTCCCGTTCTTCGGTTAAAGTGCTCGTCTAAGCTAAATATTATTGAAAATTGAAGATGGAACATCGATAGAGAAACTAAATTTGTGGAAAAAAAACTATATCAGCTTTTACATCGAATATAAATATCAGGCGATTAAAATAAATGTAGTGTATTGGAACGCGAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9111#0 -----------CAATGAACCCGGCTACTACAAGGACGGTCAGTTTGGTATTCGCATCGAG 49 consensus_9111#1 GGCAGAATCGCCACGAGGTCAGGCTACTACAAGGACGGCCAGTTTGGTATTCGCATCGAG 60 consensus_9111#5 ------------------------------------------------------------ consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 ------------------------------------------------------------ consensus_9111#2 ------------------------------------------------------------ consensus_9111#6 ------------------------------------------------------------ consensus_9111#4 ------------------------------------------------------------ consensus_9111#0 GACATCGTGCAGGTGGTGACGGCCAACGTGGGTACCAACTTTGATGGGCGCGGCGCACTC 109 consensus_9111#1 GACATCGTGCAGGTGGTGACGGCCAATGTGGGTACCAACTTTGATGGGCGCGGCGCACTC 120 consensus_9111#5 ------------------------------------------------------------ consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 ------------------------------------------------------------ consensus_9111#2 ------------------------------------------------------------ consensus_9111#6 ------------------------------------------------------------ consensus_9111#4 ------------------------------------------------------------ consensus_9111#0 ACCTTCCGCACGATAACCATGTGTCCGATCCAGACGCGGCTGATTGATGTCACACTGCTG 169 consensus_9111#1 ACCTTCCGCACGATAACCATGTGTCCGATCCAGACGCGGCTGATTGATGTCACACTGCTG 180 consensus_9111#5 ------------------------------------------------------CTCCTT 6 consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 ------------------------------------------------------------ consensus_9111#2 ------------------------------------------------------------ consensus_9111#6 ------------------------------------------------------------ consensus_9111#4 -------------------------------AAGTAAATGGTATTGTTGCTTATATTCTC 29 consensus_9111#0 ACTGCGAAGGAGCGCGACCATTTGAATGCGTAC--CATCAAACTGT--GCTCGATACGCT 225 consensus_9111#1 ACTGCGAAGGAGCGCGACCATTTGAATGCGTAC--CATCAAACTGT--GCTCGATACGCT 236 consensus_9111#5 CGCAGTCAGCAGTGTGACCATTTGAATGCGTAC--CATCAAACTGT--GCTCGATACGCT 62 consensus_9111#7 -CCGCCCACGCGTCCGCCCACGCGTCCGCGAGC--TTTGGAA--GC--GGACAACAGAAT 53 consensus_9111#3 -CCGCGGACGCGTGGGGTTTGGCTGATGCCGAC--TACAAGATCGT--GGCTCACAAGGT 55 consensus_9111#2 -CCGGGCGGTAGCGGTACCGCAGCACCGCCGTCAGCACCAAACCATCTAGCGGATGTTCC 59 consensus_9111#6 -CCGCCCACGCGTCCGGACTAGTTCTAGATCGC--TTCTAGATCGC--GAGGGCCGCCTT 55 consensus_9111#4 ATTCCTTTTGAGCGGAATGTTTTCCATTTTTCC-GCACAAGAGAAA---ACATATAAACT 85 * * * consensus_9111#0 TGGG-CCTCTTCTACA-CGAAACAAACG---ATCTGGACACGCTCGCCTGGCTAGAGCGT 280 consensus_9111#1 TGGGGCCTCTTCTACGGCGAAACAAACG---ATCTGGACACGCTCGCCTGGCTAGAGCGT 293 consensus_9111#5 TGGG-CCTCTTCTACG-CGAAACAAACG---ATCTGGACACGCTCGCCTGGCTAGAGCGT 117 consensus_9111#7 GGAGGCATTCCTTCCCTCGG--CAACGG---ACAGGGACAGAGCGGATT--CCCGAGCTT 106 consensus_9111#3 TGTGCCGTGGTTCG---CGCACCAGCTG---CGTGAAGCCGTCAAGGCTGGTGACAGCGT 109 consensus_9111#2 GTCAACGCTGTTCGCCACGGTGTAAACGTTTCCCTGCATTGTGACGCTGGACATTGGTTT 119 consensus_9111#6 TTTTTTTTTTTTTGCCATTAAGTCGGGTAGATGGTTTATTGTTATGACGCATCGTGTAGT 115 consensus_9111#4 TAAAACACGGACCGCCTGAGGACACGCGGCCACCACTTCTACTGCGACAACAACCGTGGC 145 * consensus_9111#0 GAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGT 340 consensus_9111#1 GAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGT 353 consensus_9111#5 GAAACGAAGGCTATATAAAAAGCGCAGGAAGGGAAGGGGGCGATTGGCAAAAGTGCATGT 177 consensus_9111#7 ----CGAAAACGGTCAACAGGGTG----GAAACTTCCCGTTCTTCGGTTAAAGTGCTCGT 158 consensus_9111#3 GAAGGTGCAGGTGTACATCCGCTGTCTTGGACATTTGGGACACCCCGAGATCCTGAACGT 169 consensus_9111#2 CATACTGTGACGAGTAATTCGCTA-ATGATTTTCCTCTCTTCTACTTCCATTGTTTGCTT 178 consensus_9111#6 ----TTATTTAAATTAATCTCCTTC---ACATTTTCTTGCTAAAAGTGAAAACAAATCGT 168 consensus_9111#4 AGCAGCAGCAGCAGCTACGGCACCATCACCGTTCCGCCGTTTTACTTCTTGACGGCCTGT 205 * * consensus_9111#0 GTAGGGCAGGCGAGTAACGAGCATAG--G-GATG---GC-CAGCGCC---TGAGTCACTG 390 consensus_9111#1 GTAGGGCAGGCGAGTAACGAGCATAG--G-GATG---GC-CAGCGCC---TGAGTCACTG 403 consensus_9111#5 GTAGGGCAGGCGAGTAACGAGCATAG--G-GATG---GC-CAGCGCC---TGAGTCACTG 227 consensus_9111#7 CTAAGCTAAAT-ATTATTGAAAATTG--AAGATG---GAACATCGAT---AGAGAAACTA 209 consensus_9111#3 TT---TCGAACCGTACCTGGAAGGCA--A-GAT-----CCCAGTGAC---CCACTT-CCA 214 consensus_9111#2 GTAGAACGATCCCAAGATGAGTACTGCAACGATTCGTACCCGTCGCTACATGAGCAACCG 238 consensus_9111#6 TTAACCGAGTTCGTCGCTTAGCGCTT----AAC-----CCCGTTTAGAGCAGAGTCTTTA 219 consensus_9111#4 CCGACCTTGGCCTTCTTCGTGCCGCGC-ACCTTCTTCATACGGTTCT---TGCGCTCCTT 261 * consensus_9111#0 GCTTCCAAGCGCACGAGAAGCGACA--AACGTGTGCAGCCGATAATACCGTACTTTGGCG 448 consensus_9111#1 GCTTCCAAGCGCACGAGAAGCGACA--AACGTGTGCAGCCGATAATACCGTACTTTGGCG 461 consensus_9111#5 GCTTCCAAGCGCACGAGAAGCGACA--AACGTGTGCAGCCGATAATACCGTACTTTGGCG 285 consensus_9111#7 AATTT---GTGGAAAAAAAACTATATCAGCTTTTACATCGAATATAAATAT---CAGGCG 263 consensus_9111#3 GCGTCTGGCTTTCATTGTCGCTCTG--GACCGTCTGGTCGAGAACTACCCGCGTCTGGCT 272 consensus_9111#2 GCTGCTGTGCCGCAAGCAGATGGTC--TGCGACGTCCTCCACCCTGGCCTCGCCTCGGTC 296 consensus_9111#6 GCCGCTCACCGGACAAAAACCATTC---GCCCATCCGTTCCCTGCATAATGGGCGACATC 276 consensus_9111#4 GC-GCTGCTTGCGCGTCACCTTCTTCTTCTCGTACAGTCCGTGGCGGCCGAGACGGTGCT 320 consensus_9111#0 TGTACAACGACCCACTTTGAGGTCGGAAAAGGC-CAAAATCAG--ATTCAGGGGGTCGTG 505 consensus_9111#1 TGTACAACGACCCACTTTGAGGTCGGAAAAGGC-CAAAATCAG--ATTCAGGGGGTCGTG 518 consensus_9111#5 TGTACAACGACCCACTTTGAGGTCGGAAAAGGC-CAAAATCAG--ATTCAGGGGGTCGTG 342 consensus_9111#7 ATTAAAATAAA----TGTAGTGTATTGGAATGC-GAAAAAAAA--AA------------- 303 consensus_9111#3 CGCTCTGTGCTGT-TCAAGGTGTACCAGAACAC-CGGAGATGCCCATGAGGTCCGTTGTG 330 consensus_9111#2 TCGAAGAAGGAGATCCGCGAGAAGCTCGCCGTCATGTACAAAACCACGCCGGACGTCGTG 356 consensus_9111#6 TTGGCCACGTACCGCTCGAACACGTCAATGTCCAGTGGGCCAAC-GCGCACGTTGGTGCG 335 consensus_9111#4 TGGGCTCGAACTTCTTGGCGTGGTCCAGGGTGT-CGTAGATGAGGGCGAAACCGGTCGAC 379 consensus_9111#0 TTATGCACGGGTA-----GTTA--CTTTTCGATTACACCT-GAGACATTACATCCGATCA 557 consensus_9111#1 TTATGCACGGGTA-----GTTA--CTTTTCGATTACACCT-GAGACATTACATCCGATCA 570 consensus_9111#5 TTATGCACAACTACCCGTACTA--CTTTTCGATTACACCT-GAGACATTACATCCGATCA 399 consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 CCGCAGTGTACCTGCTGATCCG--CACGAAGCCCCCGGTA-TACATGCTCCAGCGTATGG 387 consensus_9111#2 TTCGTGTTCGGTTTCCGCACGAACTTCGGTGGCGGCAAGT-CGACCGGTTTCGCCCTCAT 415 consensus_9111#6 ATGCTGCCCGAACATAGTGTACCCGTTGCCACCGCTGCCAATCCACGCCGCAATCGCAAT 395 consensus_9111#4 TTGCCGCCACCGAAGTTCGTGCGGAAACCGAACACGAACACGACGTCCGGCGTGGTTTTT 439 consensus_9111#0 CAAACAAAG-ACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAA 616 consensus_9111#1 CAAACAAAGGACAGTCTCGTGCATGGCTATCCACAAAGACACAAGGAAAGAGTTGTGGAA 630 consensus_9111#5 CAAACAAAG-ACAGTCTCGTGCATGGTTATCCACAAAGACACAAGGAAAGAGTTGTGGAA 458 consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 CTGAGCAGACCCACTACGACCCGAGCACGTACGTCCGCGCTGCCGTCAAGACCGCTCTGG 447 consensus_9111#2 CTACGACACCCTGGACCACGCCAAGAAGTTCGAGCCCAAGCACCGTCTCGGCCGCCACGG 475 consensus_9111#6 CCGATAGGTAGCGTTCACGTCCAGCGGCTCGTAGCGCGGAATCCGGCACACCCGGC---- 451 consensus_9111#4 TACATGACGGCGAGCTTCTCGCGGATCTCCTTCTTCGAGACCGAGGCGAGGCCAGGGTGG 499 consensus_9111#0 ACTGAATAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGG 676 consensus_9111#1 ACTGANTAANCAAGTGATCTCACTGGTT-------------------------------- 658 consensus_9111#5 ACTGAAGAAACAAGTGATCTCACTGGTTCTTTAAATTGGTGATTCAAATTCATATCAAGG 518 consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 AGAGCGCTTCCGAGGCTGATGAGTTTGATGATGATTACGAGTTCTCCCAGAACGCACAGG 507 consensus_9111#2 ACTGTACGAGAAGAAGAAGATGACGCGCAAGCAGCGCAAGGAGCGCAAGAACCGTATGAA 535 consensus_9111#6 ACCGCACATCCACACGCTGGACGCGCTGCAAGGCAGGGCGCGTCAGGTTGAAGACGACAC 511 consensus_9111#4 AGGACGTCGCAAACATCTGCTTGCGGCACAGCAGCGGGTTGCTCATGTAGCGACGGGTAC 559 consensus_9111#0 AACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGG 736 consensus_9111#1 ------------------------------------------------------------ consensus_9111#5 AACCACTTAAGGCATGAGGTCAAAAACTAAAGCTCAGAAAATACCCCAACAATATGATGG 578 consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 CCGCTGTCAAGCACCTGAACCCCCGTGACTTTAGCCTGCAGTACTCTGGCACTTTCCTGC 567 consensus_9111#2 GAAGGTGCGCGGCACGAAGAAGGCCAAGGTCGGACAGGCCGTCAAGAAGTAAAACGGCGG 595 consensus_9111#6 GCAGCCCCGCGAACTGCAGCACGTC----------------------------------- 536 consensus_9111#4 GAATCGTTGCAGTTCTCATCTTGGGATCGTTCTTCCAGTAGGCCAACAG----------- 608 consensus_9111#0 TA-AACGCTGATGGCCTTCCATTCGCTTGTCTTAGAAGTACGAAAATAAATCAAATTTTG 795 consensus_9111#1 ------------------------------------------------------------ consensus_9111#5 TA-AACACTGATGGCCTTCCATTCGCT--------------------------------- 604 consensus_9111#7 ------------------------------------------------------------ consensus_9111#3 GT-GATTTTGCCTTCAAGGAGCTTGAGCTCTCGTACCGCATGTACTTCTCCCAGATCGCT 626 consensus_9111#2 AACGGTGATGGTGCCGTCGCTGCTGCTGCTGCTGCTGCCACGG----------------- 638 consensus_9111#6 ------------------------------------------------------------ consensus_9111#4 ------------------------------------------------------------ consensus_9111#0 ATTTGAATCAAAAT 809 consensus_9111#1 -------------- consensus_9111#5 -------------- consensus_9111#7 -------------- consensus_9111#3 GCTGAC-------- 632 consensus_9111#2 -------------- consensus_9111#6 -------------- consensus_9111#4 -------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||