These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9115#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1016 fasta sequence [CCCAAAACCGGGCACATGTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTGACATTATTCCATCGCTTGGCTGTATTTACAGGATGATTTTATCAACTTCTAGCGCCTAAAAGATCAACACTTTAAATG-AGGCGTAGTTTTAACGCGCATAATAATCACCGGACCTTTCTATCTAGCAAAAAACAGGTCAGGTGTAAGGATAAATGATGATGGCTTTGCCGGAGACCAGCCCGTGGTGGGTAACACGGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTCGTAGTCGGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGACTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATGCAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTG-GGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCCCCCACCAACAACACAACGGCCGTAAAACCCAGTGGGCCAACAGTTCTCGAGGGATTCCGCAGTTTTTTT] [-] EMBL CNS09K3T [CCCAAAACCGGGCACATGTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTGACATTATTCCATCGCTTGGCTGTATTTACAGGATGATTTTATCAACTTCTAGCGCCTAAAAGATCAACACTTTAAATG AGGCGTAGTTTTAACGCGCATAATAATCACCGGACCTTTCTATCTAGCAAAAAACAGGTCAGGTGTAAGGATAAATGATGATGGCTTTGCCGGAGACCAGCCCGTGGTGGGTAACACGGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTCGTAGTCGGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGACTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATGCAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTGGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTG GGGGATGCACCGATTTCTGTGGAA CTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCCCCCACCAACAACACAACG ] [+] EMBL CNS09K3U [ ATTATTCCATCGCTTGGCTGTATTTACAGGATGATTTTATCAACTTCTAGCGCCTAAAAGATCAACACTTTAAATG AGGCGTAGTTTTAACGCGCATAAAAATCACCGGACCTTTCTATCTAGCAAAAAACAGGTCAGGTGTAAGGATAAATGATGATGGCTTTGCCGGAGACCAGCCCGTGGTGGGTAACACGGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTCGTAGTCGGCACGTGCCTCCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGACTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATGCAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTGGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTTTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTTCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGA CTGCGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAAAAATACCAATCGCTCGCGGATCGCTTCCCCCACCAACAACACAACGGCCGTAAAACCCAGTGGGCCAACAGTTCTCGAGGGATTCCGCAGTTTTTTT] [-] EMBL BX612358 [ TCAACACTTTAAATGAAAGCGTAGTTTTAACGCGGACAATAATCACTGGACCTTTCTATCTAGCAAAAAACAGGTCTAGTGTAAGGATAATTGATGATGGCTTTACCGGAGACCAGCCCGTGGTGGATAACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTCGTAGTCGGCACGGGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCAACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATGCAGCCGATCGCCGTCGCAATCATCATGTAATTGGCGATCTTGATTCGCACCT ATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTCCTCGATGAATTTGTACCGCTTCATGAAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTGGAACTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTG GGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGAAATTGCAATTTACGGCCCAAATT ] [-] EMBL BM603357 [ GGATAATTGATGATGGCTTTGCCGGAGACCAGCCTGTGGTGGGTAACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTCGTAGTCAGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTAACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACTTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTG GGGGATGTACCGATTTCTGTGGAAGCTACGCACGCAAATATATAATGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACcgg ] [-] EMBL BM650582 [ CAGGTTCATCTGGGCGACGGACTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATGCAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTCCTCGATGGATTTGTATCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTG GGGGATGCACCGATTTCTGTGGAAGCAGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCCCCCACCcgg ] [-] EMBL BM595891 [ TGCGCCTTCTTGCCACTGATCACCATGACGATGCAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTCCTCGATGGATTTGTATCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTG GGGGATGCACCGATTTCTGTGGAAGCAGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCCCCCACCAACAACcgg ] consensusID : consensus_9115#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 696 fasta sequence [GGCCTTTCTTGTTGTAATTCCTTGGTCGCCAAGTTCAAGGGTTCAATCTGGGCCACCGGANTTTCGCCACCGTTCTGCCGCCTTTCTTCCCCACTGAATCACCCAATTGACCGAATGCAAGCCCGATTCGCCGGTCGGCAAATCAATCCAATGGTAAATTGGGCGGATCTTGGATTCGCAACCCGTGATTNCCCGGACCCCGTTTCCAATCTTTCCTCCCTGGCTGACAAAGTTTAGGAACTTCCTCGATGGATTTGTACCGCCTTCATGAAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTGGAACTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGTAACCTCGG] [-] EMBL AL932760 [GGCCTTTCTTGTTGTAATTCCTTGGTCGCCAAGTTCAAGGGTTCAATCTGGGCCACCGGANTTTCGCCACCGTTCTGCCGCCTTTCTTCCCCACTGAATCACCCAATTGACCGAATGCAAGCCCGATTCGCCGGTCGGCAAATCAATCCAATGGTAAATTGGGCGGATCTTGGATTCGCAACCCGTGATTNCCCGGACCCCGTTTCCAATCTTTCCTCCCTGGCTGACAAAGTTTAGGAACTTCCTCGATGGATTTGTACCGCCTTCATGAAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTGGAACTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCAATTTACGGCCC AATTGCTATTTA TTACTTTTGTAAGAGAAATACCAATCGCTCGCGGTAACCTCGG] [-] EMBL AL933598 [ GTACCG CTTCATGAAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTGGAACTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACC ATCGCTtnngcct ] [-] EMBL BX614065 [ TCGACCTGGTTGGAACTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCT ] [-] EMBL BX614066 [ TCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAA ] consensusID : consensus_9115#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence [CACTTTAAAATGAGGCGTAGTTTTAACGCGCACAATAATCACCGGACCTTTCTTTCTAGCAAAAAACAGGTCAGGTGTAAGGATAATTGATGATGGCTTTGCCGGAGACCAGCCTGTGGTGGGTAACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTCGTAGTCAGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTAACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACTTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCCCCCACCGG] [-] EMBL BM653189 [CACTTTAAAATGAGGCGTAGTTTTAACGCGCACAATAATCACCGGACCTTTCTTTCTAGCAAAAAACAGGTCAGGTGTAAGGATAATTGATGATGGCTTTGCCGGAGACCAGCCTGTGGTGGGTAACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTCGTAGTCAGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTAACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACTTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCCCCCACCGG] consensusID : consensus_9115#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence [GCCGTCAGCGACGCTTCGTAGTCAGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGATTCATCTGGGCGACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTAATTCGCACTTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCTCCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACTTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCAATTTACGTCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCGGACGCGTGGGCGG] [-] EMBL BM578555 [GCCGTCAGCGACGCTTCGTAGTCAGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGATTCATCTGGGCGACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTAATTCGCACTTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCTCCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACTTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCAATTTACGTCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGATCGCTTCGGACGCGTGGGCGG] consensusID : consensus_9115#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence [CTTTGCCGGAGACCAGCCTGTGGTGGGTAACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTTCGTAGTCAGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTAACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACTTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGTACCGATTTCTGTGGAAGCTCGGACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL BM584347 [CTTTGCCGGAGACCAGCCTGTGGTGGGTAACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTTCGTAGTCAGCACGTGCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGATTCGCCCCGCTCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATCATCATGTAGTTGGCGATCTTGATTCGCACCTGATTCCGGACCCGTTCCATCTTCTCCTGGCTAACAAAGTTAGGAACTTCCTCGATGGATTTGTACCGCTTCATAAAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACTTGGTTCGAGCTGAAGCTTCGACCGGCTGCGGCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGTACCGATTTCTGTGGAAGCTCGGACGCGTGGGCGGACGCGTGGGCGG] consensusID : consensus_9115#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence [CGCCGGTCGCAATCATCATGTAATTGGCGATCTTGATTCGCACCNTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTGCCTCGATGGATTTGTACCGCGTTCAGTGAAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTGGAACTGAAGCTTCGACCGGCTGCGNNCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCAGGATCGCTTCCCCCACCAACAACACAACAGTCGTGAAACAACACCTCGGG] [-] EMBL AL930169 [CGCCGGTCGCAATCATCATGTAATTGGCGATCTTGATTCGCACCNTGATTCCGGACCCGTTCCATCTTCTCCTGGCTGACAAAGTTAGGAACTTGCCTCGATGGATTTGTACCGCGTTCAGTGAAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGATCCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACCTGGTTGGAACTGAAGCTTCGACCGGCTGCGNNCAGTGCTACGTGATCGTAGCAGCGTCGACGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCATCGCGGAGCTGGGGGATGCACCGATTTCTGTGGAAGCTGCGCACGCAAATATATAAAGCTTTCGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCAATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCAGGATCGCTTCCCCCACCAACAACACAACAGTCGTGAAACAACACCTCGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9115#1 ------------------------------------------------------------ consensus_9115#5 ------------------------------------------------------------ consensus_9115#3 ------------------------------------------------------------ consensus_9115#0 CCCAAAACCGGGCACATGTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTGACATTATTCCA 60 consensus_9115#2 ------------------------------------------------------------ consensus_9115#4 ------------------------------------------------------------ consensus_9115#1 ------------------------------------------------------------ consensus_9115#5 ------------------------------------------------------------ consensus_9115#3 ------------------------------------------------------------ consensus_9115#0 TCGCTTGGCTGTATTTACAGGATGATTTTATCAACTTCTAGCGCCTAAAAGATCAACACT 120 consensus_9115#2 -------------------------------------------------------CACTT 5 consensus_9115#4 ------------------------------------------------------------ consensus_9115#1 ------------------------------------------------------------ consensus_9115#5 ------------------------------------------------------------ consensus_9115#3 ------------------------------------------------------------ consensus_9115#0 TTAAATGAGGCGTAGTTTTAACGCGCATAATAATCACCGGACCTTTCTATCTAGCAAAAA 180 consensus_9115#2 TAAAATGAGGCGTAGTTTTAACGCGCACAATAATCACCGGACCTTTCTTTCTAGCAAAAA 65 consensus_9115#4 ------------------------------------------------------------ consensus_9115#1 ------------------------------------------------------------ consensus_9115#5 ------------------------------------------------------------ consensus_9115#3 ------------------------------------------------------------ consensus_9115#0 ACAGGTCAGGTGTAAGGATAAATGATGATGGCTTTGCCGGAGACCAGCCCGTGGTGGGTA 240 consensus_9115#2 ACAGGTCAGGTGTAAGGATAATTGATGATGGCTTTGCCGGAGACCAGCCTGTGGTGGGTA 125 consensus_9115#4 -------------------------------CTTTGCCGGAGACCAGCCTGTGGTGGGTA 29 consensus_9115#1 -------------------------GGCCTTTCTTGTTGTAATTC-CTTGGTCGCCAAGT 34 consensus_9115#5 ------------------------------------------------------------ consensus_9115#3 -----------------------------GCCGTCAGCGACGCTT-CGTAGTCAGCACGT 30 consensus_9115#0 ACACGGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTT-CGTAGTCGGCACGT 299 consensus_9115#2 ACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTT-CGTAGTCAGCACGT 184 consensus_9115#4 ACACAGCATTTTACTTCTTCTTCGCTTCCGCCGCCAGCGACGCTTTCGTAGTCAGCACGT 89 consensus_9115#1 TCAAGGGTTCAATCTGGGCCACCGGANTTTCGCCACCGTTCTGCCGCCTTTCTTCCCCAC 94 consensus_9115#5 ------------------------------------------------------------ consensus_9115#3 GCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGATTCATCTGGGCGACGGATTCGCCCCGC 90 consensus_9115#0 GCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGACTCGCCCCGC 359 consensus_9115#2 GCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGATTCGCCCCGC 244 consensus_9115#4 GCCTTCTCGTTGTACTCCTTGTGCCAGTCCAGGTTCATCTGGGCGACGGATTCGCCCCGC 149 consensus_9115#1 TGAATCACCCAATTG--ACCGAATGCAAGCCCGATTCG-CCGGTCGGCAAATCAATCCAA 151 consensus_9115#5 ------------------------------------CG-CCGGTCG------CAATC--A 15 consensus_9115#3 TCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATC--A 148 consensus_9115#0 TCCTGCGCCTTCTTGCCACTGATCACCATGACGATGCAACCGATCGCGGTCGCAATC--A 417 consensus_9115#2 TCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATC--A 302 consensus_9115#4 TCCTGCGCCTTCTTGCCACTGATCACCATGACGATACAACCGATCGCGGTCGCAATC--A 207 * *** *** ***** * consensus_9115#1 TGGTAAATTGGGCGGATCTTGGATTCGCAACCCGTGATTNCCCGGACCCCGTTTCCAATC 211 consensus_9115#5 TCATGTAATTGGCG-ATCTTG-ATTCGCA--CCNTGATTCC---GGACCCGTTCC--ATC 66 consensus_9115#3 TCATGTAGTTGGCG-ATCTTA-ATTCGCA---CTTGATTCC---GGACCCGTTCC--ATC 198 consensus_9115#0 TCATGTAGTTGGCG-ATCTTG-ATTCGCA---CCTGATTCC---GGACCCGTTCC--ATC 467 consensus_9115#2 TCATGTAGTTGGCG-ATCTTG-ATTCGCA---CCTGATTCC---GGACCCGTTCC--ATC 352 consensus_9115#4 TCATGTAGTTGGCG-ATCTTG-ATTCGCA---CCTGATTCC---GGACCCGTTCC--ATC 257 * * * * **** ***** ******* * ***** * * ****** * *** consensus_9115#1 TTTCCTCCCTGGCTGACAAAGTTTAGGAACTTCCTCGATGGATTTGTACCGCCTTCA-TG 270 consensus_9115#5 TTCTC---CTGGCTGACAAAGTTAGGAACTTGCCTCGATGGATTTGTACCGCGTTCAGTG 123 consensus_9115#3 TTCTC---CTGGCTGACAAAGTT-AGGAACTTCCTCGATGGATTTGTACCGC-TTCA-TA 252 consensus_9115#0 TTCTC---CTGGCTGACAAAGTT-AGGAACTTCCTCGATGGATTTGTACCGC-TTCA-TA 521 consensus_9115#2 TTCTC---CTGGCTAACAAAGTT-AGGAACTTCCTCGATGGATTTGTACCGC-TTCA-TA 406 consensus_9115#4 TTCTC---CTGGCTAACAAAGTT-AGGAACTTCCTCGATGGATTTGTACCGC-TTCA-TA 311 ** * ****** ******** * * * ******************** **** * consensus_9115#1 AAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGAT 330 consensus_9115#5 AAGACCAGCATACGCTTCTCCAGCCCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGAT 183 consensus_9115#3 AAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGAT 312 consensus_9115#0 AAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGAT 581 consensus_9115#2 AAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGAT 466 consensus_9115#4 AAGACCAGCATACGCTTCTCCAGCGCGTTCGGTGTGTGGGTGTGCGTGTTGATGCTCGAT 371 ************************ *********************************** consensus_9115#1 CCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACC 390 consensus_9115#5 CCATTGCTTCCACCGGCGGACGGTGTTGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACC 243 consensus_9115#3 CCATTGCTTCCTCCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACT 372 consensus_9115#0 CCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACC 641 consensus_9115#2 CCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACT 526 consensus_9115#4 CCATTGCTTCCACCGGCGGACGGAGTCGATTTCGGTGGCTGCTGGGGCTTTGGTTCGACT 431 *********** *********** ** ******************************** consensus_9115#1 TGGTTGGAACTGAAGCTTCGACCGGCTGCGGC-AGTGCTACGTGATCGTAGCAGCGTCGA 449 consensus_9115#5 TGGTTGGAACTGAAGCTTCGACCGGCTGCGNNCAGTGCTACGTGATCGTAGCAGCGTCGA 303 consensus_9115#3 TGGTTCGAGCTGAAGCTTCGACCGGCTGCGGC-AGTGCTACGTGATCGTAGCAGCGTCGA 431 consensus_9115#0 TGGTTCGAGCTGAAGCTTCGACCGGCTGCGGC-AGTGCTACGTGATCGTAGCAGCGTCGA 700 consensus_9115#2 TGGTTCGAGCTGAAGCTTCGACCGGCTGCGGC-AGTGCTACGTGATCGTAGCAGCGTCGA 585 consensus_9115#4 TGGTTCGAGCTGAAGCTTCGACCGGCTGCGGC-AGTGCTACGTGATCGTAGCAGCGTCGA 490 ***** ** ********************* *************************** consensus_9115#1 CGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCAT 509 consensus_9115#5 CGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCAT 363 consensus_9115#3 CGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCAT 491 consensus_9115#0 CGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCAT 760 consensus_9115#2 CGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCAT 645 consensus_9115#4 CGTTCGAGCCACGCCGGATGATGTACGTGCGATTTCGCATGCTGTGCGCAAAAAATTCAT 550 ************************************************************ consensus_9115#1 CGCGGAGCTGGGGGATGCACCGATTTCT-GTGGAAGCTGCGCACGCAAATATATAAAGCT 568 consensus_9115#5 CGCGGAGCTGGGGGATGCACCGATTTCT-GTGGAAGCTGCGCACGCAAATATATAAAGCT 422 consensus_9115#3 CGCGGAGCTGGGGGATGCACCGATTTCT-GTGGAAGCTGCGCACGCAAATATATAAAGCT 550 consensus_9115#0 CGCGGAGCTGGGGGATGCACCGATTTCT-GTGGAAGCTGCGCACGCAAATATATAAAGCT 819 consensus_9115#2 CTTTTG--TAAGAGAAATACCAATCGCTCGCGGA--TCGCTTCCCCCACCGG-------- 693 consensus_9115#4 CGCGGAGCTGGGGGATGTACCGATTTCTGTGGAAGCTCGGACGCGTGGGCGGACGCGTGG 610 * * * ** *** ** ** * * * * consensus_9115#1 TTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCA 628 consensus_9115#5 TTCG-TTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTAAAGTAATTGCA 481 consensus_9115#3 TTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCA 610 consensus_9115#0 TTCGGTTGCGTTTAGTGGAAGCGTTTATGCGCTTCACTTAGTGAACTTGAAGTAATTGCA 879 consensus_9115#2 ------------------------------------------------------------ consensus_9115#4 GCGG-------------------------------------------------------- 614 consensus_9115#1 ATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGG- 687 consensus_9115#5 ATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCAG- 540 consensus_9115#3 ATTTACGTCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGGA 670 consensus_9115#0 ATTTACGGCCCAAATTGCTATTTATTTACTTTTGTAAGAGAAATACCAATCGCTCGCGG- 938 consensus_9115#2 ------------------------------------------------------------ consensus_9115#4 ------------------------------------------------------------ consensus_9115#1 TAACCTCGG--------------------------------------------------- 696 consensus_9115#5 GATCGCTTCCCCCACCAACAACACAACAGTCGTGAAACAACACCTCGGG----------- 589 consensus_9115#3 TCGCTTCGGACGCGTGGGCGG--------------------------------------- 691 consensus_9115#0 -ATCGCTTCCCCCACCAACAACACAACGGCCGTAAAACCCAGTGGGCCAACAGTTCTCGA 997 consensus_9115#2 ------------------------------------------------------------ consensus_9115#4 ------------------------------------------------------------ consensus_9115#1 ------------------- consensus_9115#5 ------------------- consensus_9115#3 ------------------- consensus_9115#0 GGGATTCCGCAGTTTTTTT 1016 consensus_9115#2 ------------------- consensus_9115#4 ------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||