These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_913#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence [CCGCCCACGCGTCCGGTTTGCGCGTACCGTCGCTCGTCCCGTGTTTCCCCGTTCACCTTCGCGCACACGTGCAGAACGTACGGGATTTGATTGGCGACAATTTTTTGCAAACCAATTTGTTCGGGACGGAAGAAATAAAGCCGCAGCTGCGTTTGGTTTTGTTTTTAAATTATTTCTGGTCTGCTGCAGCACTGCAAGATAAAGGGGGAAATTTGCGGCATATACAAAAAAAAACGCAACAACTCAAAAGAGCATTCCCTTTACGAAAAGAGCACCCAGTGCCCTTCGCCCAAACGAGTGGTCATCAACACATCGTTCGTCCCTTTCTGCTGCTAAAGAAATCCGCGGAGCAAAAACCATTCTCCATGAAACGAATGAGCAGCGCGTGTTAAAGTTTTTGAACCTGCTGTACTCGAACAGGCGGGTTTTTTTTTCCTTCTTCGGTGGTACCATGGGTCATCGAAGAAAGCGTAATAATATGTGTGAACGTGTCGTTGCCCGCTGGACTGTAAACGCGCCCCCTGCAACAGTTTGAACTCGCAAATTCGCAACCGGAACATCGTTCGCACAGCAGACTTGGCGAGCGCGCGCGCGATCGCAAACACGCCCCTGGCTCCAAGGGACA] [+] EMBL BM630467 [CCGCCCACGCGTCCGGTTTGCGCGTACCGTCGCTCGTCCCGTGTTTCCCCGTTCACCTTCGCGCACACGTGCAGAACGTACGGGATTTGATTGGCGACAATTTTTTGCAAACCAATTTGTTCGGGACGGAAGAAATAAAGCCGCAGCTGCGTTTGGTTTTGTTTTTAAATTATTTCTGGTCTGCTGCAGCACTGCAAGATAAAGGGGGAAATTTGCGGCATATACAAAAAAAAACGCAACAACTCAAAAGAGCATTCCCTTTACGAAAAGAGCACCCAGTGCCCTTCGCCCAAACGAGTGGTCATCAACACATCGTTCGTCCCTTTCTGCTGCTAAAGAAATCCGCGGAGCAAAAACCATTCTCCATGAAACGAATGAGCAGCGCGTGTTAAAGTTTTTGAACCTGCTGTACTCGAACAGGCGGGTTTTTTTTTCCTTCTTCGGTGGTACCATGGGTCATCGAAGAAAGCGTAATAATATGTGTGAACGTGTCGTTGCCCGCTGGACTGTAAACGCGCCCCCTGCAACAGTTTGAACTCGCAAATTCGCAACCGGAACATCGTTCGCACAGCAGACTTGGCGAGCGCGCGCGCGATCGCAAACACGCCCCTGGCTCCAAGGGACA] consensusID : consensus_913#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 234 fasta sequence [ATAGGTCGTCGTGCAGTGCCCAAAAGGTGTCACCAGTGCGGGTTGGTCGCTTCCCACCTCTTACAGCATTTTTGGCAAACACGATTTGATTGGCGACAAATTTTTGTAAACCAATTTGTTCGGGACGGAAGAAATAAAGCCGCAGCTGCGTTTGGTTTTTTTTTTTTAATTATTTCTGGTCTGCTGCAGCACTGCAAGATAAAGGGGGAAATTTGCGGCATATACAAAAAAACG] [+] EMBL AGA281859 [ATAGGTCGTCGTGCAGTGCCCAAAAGGTGTCACCAGTGCGGGTTGGTCGCTTCCCACCTCTTACAGCATTTTTGGCAAACACGATTTGATTGGCGACAAATTTTTGTAAACCAATTTGTTCGGGACGGAAGAAATAAAGCCGCAGCTGCGTTTGGTTTTTTTTTTTTAATTATTTCTGGTCTGCTGCAGCACTGCAAGATAAAGGGGGAAATTTGCGGCATATACAAAAAAACG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_913#0 -CCGCCCACGCGTCCGGTTTGCGCGTACCGTCGCTCGTCCCGTGTTTCCCCGTTCACCTT 59 consensus_913#1 ATAGGTCGT-CGTGCAGTGCCCAAAAGGTGTCACCAGTGCGGGTTGGTCGCTTCCCACCT 59 * * *** * ** * *** * ** * * * * * * * * * consensus_913#0 CGCGCACACGTGCAGAACGTACGGGATTTGATTGGCGACAATTTTTTGCAAACCAATTTG 119 consensus_913#1 CTTACA-GCATTTTTGGCAAACACGATTTGATTGGCGACAAATTTTTGTAAACCAATTTG 118 * ** * * * ** ***************** ****** *********** consensus_913#0 TTCGGGACGGAAGAAATAAAGCCGCAGCTGCGTTTGGTTTTGTTTTTA-AATTATTTCTG 178 consensus_913#1 TTCGGGACGGAAGAAATAAAGCCGCAGCTGCGTTTGGTTTTTTTTTTTTAATTATTTCTG 178 ***************************************** ***** *********** consensus_913#0 GTCTGCTGCAGCACTGCAAGATAAAGGGGGAAATTTGCGGCATATACAAAAAAAAACGCA 238 consensus_913#1 GTCTGCTGCAGCACTGCAAGATAAAGGGGGAAATTTGCGGCATATACAAAAAAACG---- 234 ****************************************************** consensus_913#0 ACAACTCAAAAGAGCATTCCCTTTACGAAAAGAGCACCCAGTGCCCTTCGCCCAAACGAG 298 consensus_913#1 ------------------------------------------------------------ consensus_913#0 TGGTCATCAACACATCGTTCGTCCCTTTCTGCTGCTAAAGAAATCCGCGGAGCAAAAACC 358 consensus_913#1 ------------------------------------------------------------ consensus_913#0 ATTCTCCATGAAACGAATGAGCAGCGCGTGTTAAAGTTTTTGAACCTGCTGTACTCGAAC 418 consensus_913#1 ------------------------------------------------------------ consensus_913#0 AGGCGGGTTTTTTTTTCCTTCTTCGGTGGTACCATGGGTCATCGAAGAAAGCGTAATAAT 478 consensus_913#1 ------------------------------------------------------------ consensus_913#0 ATGTGTGAACGTGTCGTTGCCCGCTGGACTGTAAACGCGCCCCCTGCAACAGTTTGAACT 538 consensus_913#1 ------------------------------------------------------------ consensus_913#0 CGCAAATTCGCAACCGGAACATCGTTCGCACAGCAGACTTGGCGAGCGCGCGCGCGATCG 598 consensus_913#1 ------------------------------------------------------------ consensus_913#0 CAAACACGCCCCTGGCTCCAAGGGACA 625 consensus_913#1 --------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||