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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9144#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1343 fasta sequence
[CCGATTACCGCCTTCTATTTTAGTTTTACGGCATAAATACGGTGGCCTTTATCGGTTGCAGTTAGCCTTTTGTCCGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAAATTCGCGAGGTGGAGGT-AGAGTTTGGGTTCGTACTGT-CCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGTGGAGGCACCGTGCTGGATCTGGGAGTATACACGATACAGGTGT-GTCTGTGGGCGTTCGGT-GGAAAAGCACCGGAAAAAGTGGTGTCGTCTGGTGTGACCAACGACGAGGGCGTTGATTTGGAGGTAACGGCTGAGCTGCATTTTCCCGGCGGAGGTATTGGGCGTATGAAAACGAGCGCTCTGCGGGAGCTAAAGAATACCGCCGTAGTTCGTGGCAGTAAAGGCAGTGTAACGCTACACGGCTTCTGGTGTCCACAGTTACTCACCGATGTTGACGGCAAGGAACTAGTAGACACGCTTCCCAACGCTCGGCATCCGTTCAATTTTACTAACAGTTGTGGTTTACGGTACGAGGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTGCAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGAGCAGTTTGCTGTTTAAAATTCGTTATCATCTTCCGTAAACACATTTAAGCTGCTGCTTCATTTCAGTTGGGTTTTAGTTGAGGNGTATTATTACTTTCATATAATGGTGAACAGTCGTTTGGAGATTATCGGATTNAATCAAACTTATGACAATCATACTGGGATATCATTAACAAGTTACTGAT]
[+] EMBL BM587568 [CCGATTACCGCCTTCTATTTTAGTTTTACGGCATAAATACGGTGGCCTTTATCGGTTGCAGTTAGCCTTTTGTCCGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAAATTCGCGAGGTGGAGGT AGAGTTTGGGTTCGTACTGT CCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGTGGAGGCACCGTGC ]
[+] EMBL BX604632 [ CTTCTATTTTAGTTTTACGGCATAAATACGGTGGCCTTTATCGGTTGCAGTTAGCCTTTTGTCCGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGTTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTC ]
[+] EMBL BM637105 [ ccgGGCCTTTATCGGTTGCAGTTAGCCTTTTGTCCGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTG ]
[+] EMBL BM650705 [ ccgGCCTTTTGTCCGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAAATTCGCGAGGTGGAGGT AGAGTTTGGGTTCGTACTGT CCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGTGGAGGCACCGTGCTGGATCTGGGAGTATACACGATACAGGTGT Ggtc ]
[+] EMBL BM625983 [ ccgGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATC ]
[+] EMBL BM619337 [ ccgATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGGAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCAGACCATCAGGTAGTAGCTGTAGCTGCTCGAAAGCTGCCGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAGATTCGCGAGGTGGAGGT AGAGTTTGGGTTCGTACTGT CCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGCGGAGGCACCGTACTGGATCTGGGAGTATACACGATACAGGTGT GTCTGTGGGCGTTCGGTGGGAAAAGCACCGGAAAAAGT ]
[+] EMBL BM612393 [ ccgATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAAATTCGCGAGGTGGAGGTAAGAGTTTGGGTTCGTACTGT CCGATG ]
[+] EMBL BM641911 [ ccgCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAAATTCGCGAGGTGGAGGT AGAGTTTGGGTTCGTACTGTCCCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGTGGAGGCACCGTGCTGGATCTGGGAGTATACACGATACAGGTGTGGTCTGTGGGCGTTCGGT GG AAAGCACCGGA ]
[+] EMBL BX629027 [ GGAGGT AGAGTTTGGGTTCGTACTGT CCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGTGGAGGCACCGTGCTGGATCTGGGAGTATACACGATACAGGTGT GTCTGTGGGCGTTCGGT GGAAAAGCACCGGAAAAAGTGGTGTCGTCTGGTGTGACCAACGACGAGGGCGTTGATTTGGAGGTAACGGCTGAGCTGCATTTTCCCGGCGGAGGTATTGGGCGTATGAAAACGAGCGCTCTGCGGGAGCTAAAGAATACCGCCGTAGTTCGTGGCAGTAAAGGCAGTGTAACGCTACACGGCTTCTGGTGTCCACAGTTACTCACCGATGTTGACGGCAAGGAACTAGTAGACACGCTTCCCAACGCTCGGCATCCGTTCAATTTTACTAACAGTTGTGGTTTACGGTACGAGGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTGCAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAG ]
[+] EMBL BX626452 [ GATCGCTTGCGGCTCAAGAGTCTCGGTGGAGGCACCGTGCTGGATCTGGGAGTATACACGATACAGGTGT GTCTGTGGGCGTTCGGT GGAAAAGCACCGGAAAAAGTGGTGTCGTCTGGTGTGACCAACGACGAGGGCGTTGATTTGGAGGTAACGGCTGAGCTGCATTTTCCCGGCGGAGGTATTGGGCGTATGAAAACGAGCGCTCTGCGGGAGCTAAAGAATACCGCCGTAGTTCGTGGCAGTAAAGGCAGTGTAACGCTACACGGCTTCTGGTGTCCACAGTTACTCACCGATGTTGACGGCAAGGAACTAGTAGACACGCTTCCCAACGCTCGGCATCCGTTCAATTTTACTAACAGTTGTGGTTTACGGTACGAGGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTGCAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGAGCAGTTTGCTGTTTAAAATTCGTTATCATCTTCCGTAAACACATTTAAGCTGCTGCTTCATTTCAGTTGGGTTTTAGTTGAGGNGTATTATTACTTTCATATAATGGTGAACAGTCGTTTGGAGATTATCGGATTNAATCAAACTTATGACAATCATACTGGGATATCATTAACAAGTTACTGAT]
consensusID : consensus_9144#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[CCGCCCACGCGTCCGGTCGTCTGGTGTGACCAACGACGAGGGCGTTGATTTGGAGGTAACGGCTGAGCTGCATTTTCCCGGCGGAGGTATTGGGCGTATGAAAACGAGCGCTCTGCGGGAGCTAAAGAATACTGCCGTAGTTCGTGGCAGTAAAGGCAGTGTAACGCTACACGGCTTCTGGTGTCCACAGTTACTCATCGATGTTGACGGCAAGGAACTAGTAGACACGCTTCCCAACGCTCGGCATCCGTTCAATTTTACTAACAGTTGTGGTTTACGGTACGAGGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTGCAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGCGCAGTTTGCTGTTTAAAATTCGTTATCATCTTCCGTAAACACATTTAAGCTGCTGCTTCATTTCAGTGGGGTTTCAGTTGAGGTGTATTATTACTTTCATATAATGGTGAAAAGTCGTTTGGAGATTATCGGGTTAAATCAAACTTATGACAATCATACTGGATATAATTAACAAGTTACTGATAGTCTGTTCAACATTCTATCGGAAAAAAGGAAAGGAAAATTATGATAAAAAAGGAAGGATTACTATTTTACTAAATACAAGTTTTCTTGGT]
[+] EMBL BM616852 [CCGCCCACGCGTCCGGTCGTCTGGTGTGACCAACGACGAGGGCGTTGATTTGGAGGTAACGGCTGAGCTGCATTTTCCCGGCGGAGGTATTGGGCGTATGAAAACGAGCGCTCTGCGGGAGCTAAAGAATACTGCCGTAGTTCGTGGCAGTAAAGGCAGTGTAACGCTACACGGCTTCTGGTGTCCACAGTTACTCATCGATGTTGACGGCAAGGAACTAGTAGACACGCTTCCCAACGCTCGGCATCCGTTCAATTTTACTAACAGTTGTGGTTTACGGTACGAGGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTGCAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGCGCAGTTTGCTGTTTAAAATTCGTTATCATCTTCCGTAAACACATTTAAGCTGCTGCTTCATTTCAGTGGGGTTTCAGTTGAGGTGTATTATTACTTTCATATAATGGTGAAAAGTCGTTTGGAGATTATCGGGTTAAATCAAACTTATGACAATCATACTGGATATAATTAACAAGTTACTGATAGTCTGTTCAACATTCTATCGGAAAAAAGGAAAGGAAAATTATGATAAAAAAGGAAGGATTACTATTTTACTAAATACAAGTTTTCTTGGT]
consensusID : consensus_9144#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[AATCCCCCGAGGTTAANGTGCATCGGTGTATCATTCACGTGACAGTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGANGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAAGTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAAATTCGCGAGCGTGGAGGTAGAGTNTGGGTATCGTACTGTCCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGCGGAGGCACCGTGCTGGATCTCGGCGANTATACACCGATACAGGTGTGTCTAGCNGGGGCGTACGGGTGGAAAAAGCACC]
[+] EMBL AL694499 [AATCCCCCGAGGTTAANGTGCATCGGTGTATCATTCACGTGACAGTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGANGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAAGTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAAATTCGCGAGCGTGGAGGTAGAGTNTGGGTATCGTACTGTCCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGCGGAGGCACCGTGCTGGATCTCGGCGANTATACACCGATACAGGTGTGTCTAGCNGGGGCGTACGGGTGGAAAAAGCACC]
consensusID : consensus_9144#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence
[CCGCGGACGCGTGGGGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGGAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCAGACCATCAGGTAGTAGCTGTAGCTGCTCGAAAGCTGCCGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAGATTCGCGAGGTGGAGGTAGAGTTTGGGTTCGTACTGTCCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGCGGAGGCACCGTACTGGATCTGGGAGTATACACGATACAGGTGTGTCTGTGGGCGTTCGGT]
[+] EMBL BM651414 [CCGCGGACGCGTGGGGTCTAATCAAGGTGCATCGGTGTATCATTACGTGACAGTTACACTATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAATTGCTAGCGCTGGGAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGGCAGACCATCAGGTAGTAGCTGTAGCTGCTCGAAAGCTGCCGGATGCTGAAAAATTTGCCACTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAGGCGTTGGCGAAAGATCCAAACGTAGATGTCGTTTACATTGGGGCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGATGTTACAGCACGGCAAGCATGTGCTGTGCGAAAAACCGCTCTGTCTGAACGAAGGCCAATCGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCTATCTGGTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGGAGAGATTCGCGAGGTGGAGGTAGAGTTTGGGTTCGTACTGTCCGATGTCGATCGCTTGCGGCTCAAGAGTCTCGGCGGAGGCACCGTACTGGATCTGGGAGTATACACGATACAGGTGTGTCTGTGGGCGTTCGGT]
consensusID : consensus_9144#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence
[CCGCGGACGCGTGGGGTAGTTTTCGCGGAAGATGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTGCAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGCGCAGTTTGCTGTTTAAAATTCGTTATCATCTTCCGTAAACACATTTAAGCTGCTGCTTCATTTCAGTGGGGTTTCAGTTGAGGTGTATTATTACTTTCATATAATGGTGAAAAGTCGTTTGGAGATTATCGGGTTAAATCAAACTTATGACAATCATACTGGATATAATTAACAAGTTACTGATAGTCTGTTCAACATTCTATCGGAAAAAAGGAAAGGAAAATTATGATAAAAAAGGAAGGATTACTATTTTACTAAATACAAGTTTTCTTG]
[+] EMBL BM643566 [CCGCGGACGCGTGGGGTAGTTTTCGCGGAAGATGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTGCAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGCGCAGTTTGCTGTTTAAAATTCGTTATCATCTTCCGTAAACACATTTAAGCTGCTGCTTCATTTCAGTGGGGTTTCAGTTGAGGTGTATTATTACTTTCATATAATGGTGAAAAGTCGTTTGGAGATTATCGGGTTAAATCAAACTTATGACAATCATACTGGATATAATTAACAAGTTACTGATAGTCTGTTCAACATTCTATCGGAAAAAAGGAAAGGAAAATTATGATAAAAAAGGAAGGATTACTATTTTACTAAATACAAGTTTTCTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 -----------------------------------------------------------C 1
consensus_9144#0 CCGATTACCGCCTTCTATTTTAGTTTTACGGCATAAATACGGTGGCCTTTATCGGTTGCA 60
consensus_9144#1 ---------------------------CCGCCCACGCGTCCGGTCGTCTGGTGTGACCAA 33
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ---AATCCCCCGAG-GTT-----AANGTGCATCGGTGTATCATTCACGTGACAGT-ACAC 50
consensus_9144#3 CGCGGACGCGTGGG-GTCTAATCAAGGTGCATCGGTGTATCATT-ACGTGACAGTTACAC 59
consensus_9144#0 GTTAGCCTTTTGTCCGTCTAATCAAGGTGCATCGGTGTATCATT-ACGTGACAGTTACAC 119
consensus_9144#1 CGACGAGGGCGTTGATTTGGAGGTAACGGCTGAGCTGCATTTTCCCGGCGGAGGTATTGG 93
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 TATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAA 110
consensus_9144#3 TATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAA 119
consensus_9144#0 TATCAACTGTGTTGTAACCTAACTACAGAACAACGATGGGATCGCCACTTCGATGGGGAA 179
consensus_9144#1 GCGTATGAAAACGAGCGCTCTGCGGGAGCTAAAGAATACTGCCGTAGTTCGTGGCAGTAA 153
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 TTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGG 170
consensus_9144#3 TTGCTAGCGCTGGGAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGG 179
consensus_9144#0 TTGCTAGCGCTGGCAAGATCTCGCACGATTTCGTGAATGCTGTCGGAACGCTGCCAGCGG 239
consensus_9144#1 AGGCAGTGTAACGCTACACGGCTTCTGGTGTCCACAGTTACTCATCGATGTTGACGGCAA 213
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 CGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCA 230
consensus_9144#3 CAGACCATCAGGTAGTAGCTGTAGCTGCTCGAAAGCTGCCGGATGCTGAAAAATTTGCCA 239
consensus_9144#0 CGGACCATCAGGTAGTAGCTGTAGCTGCCCGAAAGCTGCTGGATGCTGAAAAATTTGCCA 299
consensus_9144#1 GGAACTAGTAGACACGCTTCCCAACGCTCGGCATCCGTTCAATTTTACTAACAGTTG--- 270
consensus_9144#4 --------------------------------------------CCGCGGACGCGTGGGG 16
* **
consensus_9144#2 CTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAG-GCGTTGGCGAAAGATCCAAAC 289
consensus_9144#3 CTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAG-GCGTTGGCGAAAGATCCAAAC 298
consensus_9144#0 CTCTCCATGGTATTGAACGGGCATACGAAGGCTATCAG-GCGTTGGCGAAAGATCCAAAC 358
consensus_9144#1 TGGTTTACG----GTACGAGGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGG--CCGATT 324
consensus_9144#4 TAGTTTTCGC---GGAAGATGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGG--CCGATT 71
* * * *** * **** *** ** *** * * ** *
consensus_9144#2 GTAGATGTCGTTTACATTGGG-GCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGAT 348
consensus_9144#3 GTAGATGTCGTTTACATTGGG-GCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGAT 357
consensus_9144#0 GTAGATGTCGTTTACATTGGG-GCAGTTAATAACGCACACTACGAGCTCGGAGTGCTGAT 417
consensus_9144#1 GCAATCGGCGTCTGTATCACATGTGGACAGTT-TGCTAATTGCCCGCATCCAGGACCAAA 383
consensus_9144#4 GCAATCGGCGTCTGTATCACATGTGGACAGTT-TGCTAATTGCCCGCATCCAGGACCAAA 130
* * * *** * ** * * * * ** * * * ** ** * *
consensus_9144#2 GTTACAGCACGGCAAGCATGTGCTGTGCGAAAAAC-CGCTCTGTCTGAACGAAGGCCAAT 407
consensus_9144#3 GTTACAGCACGGCAAGCATGTGCTGTGCGAAAAAC-CGCTCTGTCTGAACGAAGGCCAAT 416
consensus_9144#0 GTTACAGCACGGCAAGCATGTGCTGTGCGAAAAAC-CGCTCTGTCTGAACGAAGGCCAAT 476
consensus_9144#1 TTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGCGCAGTTTGCTGTTTAAAATTCGT 443
consensus_9144#4 TTCGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGCGCAGTTTGCTGTTTAAAATTCGT 190
* * ** ** * * *** ** * *** * * ** *
consensus_9144#2 CGANGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCT--ATCTG 465
consensus_9144#3 CGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCT--ATCTG 474
consensus_9144#0 CGAAGCGGCTCGTCAAGCTGGCAAGTGAACGGAATCTCTTCCTCATGGAAGCT--ATCTG 534
consensus_9144#1 TATCATCTTCCGTAAA---CACATTTAAGCTGCTGCTTCATTTCAGTGGGGTTTCAGTTG 500
consensus_9144#4 TATCATCTTCCGTAAA---CACATTTAAGCTGCTGCTTCATTTCAGTGGGGTTTCAGTTG 247
*** ** ** * * * * ** *** * * * * **
consensus_9144#2 GTCCCGATTTTTCCCGTTTTATCGTCAAGTACGCGAGCGCATTGACCGTGGGGAGCTGGG 525
consensus_9144#3 GTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGG 534
consensus_9144#0 GTCCCGATTTTTCCCGTTTTATCGTCAGCTACGCGAGCGCATTGACCGTGGGGAGCTGGG 594
consensus_9144#1 AGGTGTATTATTACTTTCATATAAT--GGTGAAAAGTCGTTTGGAGATTATCGGGTTAAA 558
consensus_9144#4 AGGTGTATTATTACTTTCATATAAT--GGTGAAAAGTCGTTTGGAGATTATCGGGTTAAA 305
*** ** * * *** * * ** * ** * * * *
consensus_9144#2 AGAAATTCGCGAGCGTGGAGGTAGAGTNTGGGTATCGTACTGTCCGATGTC-GATCGCTT 584
consensus_9144#3 AGAGATTCGCGAG-GTGGAGGTAGAGTTTGGGT-TCGTACTGTCCGATGTC-GATCGCTT 591
consensus_9144#0 AGAAATTCGCGAG-GTGGAGGTAGAGTTTGGGT-TCGTACTGTCCGATGTC-GATCGCTT 651
consensus_9144#1 TCAAACTTATGACAATCATACTGGA-TATAATTAACAAGTTACTGATAGTCTGTTCAACA 617
consensus_9144#4 TCAAACTTATGACAATCATACTGGA-TATAATTAACAAGTTACTGATAGTCTGTTCAACA 364
* * * ** * * ** * * * * * *** * **
consensus_9144#2 GCGGCTCAAGAGTCTCGGCGGAGGCACCGTGCTGGATCTCGGCG-ANTA-TACACCGATA 642
consensus_9144#3 GCGGCTCAAGAGTCTCGGCGGAGGCACCGTACTGGATCTGGG---AGTA-TACAC-GATA 646
consensus_9144#0 GCGGCTCAAGAGTCTCGGTGGAGGCACCGTGCTGGATCTGGG---AGTA-TACAC-GATA 706
consensus_9144#1 TTCTATCGGAAAAAAGGAAAGGAAAATTATGATAAAAAAGGAAGGATTACTATTTTACTA 677
consensus_9144#4 TTCTATCGGAAAAAAGGAAAGGAAAATTATGATAAAAAAGGAAGGATTACTATTTTACTA 424
** * * * * * * * * * ** ** **
consensus_9144#2 CAGGTGTGTCTAGCNGGGGCGTACGGGTGGAAAAAGCACC-------------------- 682
consensus_9144#3 CAGGTGTGTCT---GTGGGCGTTCGGT--------------------------------- 670
consensus_9144#0 CAGGTGTGTCT---GTGGGCGTTCGGTGGAAAAGCACCGGAAAAAGTGGTGTCGTCTGGT 763
consensus_9144#1 AATACAAGTTTTCTTGGT------------------------------------------ 695
consensus_9144#4 AATACAAGTTTTCTTG-------------------------------------------- 440
* ** *
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 GTGACCAACGACGAGGGCGTTGATTTGGAGGTAACGGCTGAGCTGCATTTTCCCGGCGGA 823
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 GGTATTGGGCGTATGAAAACGAGCGCTCTGCGGGAGCTAAAGAATACCGCCGTAGTTCGT 883
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 GGCAGTAAAGGCAGTGTAACGCTACACGGCTTCTGGTGTCCACAGTTACTCACCGATGTT 943
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 GACGGCAAGGAACTAGTAGACACGCTTCCCAACGCTCGGCATCCGTTCAATTTTACTAAC 1003
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 AGTTGTGGTTTACGGTACGAGGCAGAGGAAGTGCGCCAGTGCATTGTAGCTGGCCGATTG 1063
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 CAATCGGCGTCTGTATCACATGTGGACAGTTTGCTAATTGCCCGCATCCAGGACCAAATT 1123
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 CGAAAGCAGGTTGGCGTAGTTTTCGCGGAAGATGAGCAGTTTGCTGTTTAAAATTCGTTA 1183
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 TCATCTTCCGTAAACACATTTAAGCTGCTGCTTCATTTCAGTTGGGTTTTAGTTGAGGNG 1243
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ------------------------------------------------------------
consensus_9144#3 ------------------------------------------------------------
consensus_9144#0 TATTATTACTTTCATATAATGGTGAACAGTCGTTTGGAGATTATCGGATTNAATCAAACT 1303
consensus_9144#1 ------------------------------------------------------------
consensus_9144#4 ------------------------------------------------------------
consensus_9144#2 ----------------------------------------
consensus_9144#3 ----------------------------------------
consensus_9144#0 TATGACAATCATACTGGGATATCATTAACAAGTTACTGAT 1343
consensus_9144#1 ----------------------------------------
consensus_9144#4 ----------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||