These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9165#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1457 fasta sequence [ATCAGTCT-TGCTCGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT-GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC-GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC-GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA-CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTGGTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACC-CGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGACAATCTCATTGAAAACAAATTAAAAAAAAAAAAAA] [+] EMBL CNS08NX0 [ATCAGTCTGTGCTCGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTAC CTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATTGGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATG ] [+] EMBL CNS08OM3 [ t actggGTTGTCTTTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGC ] [+] EMBL CNS08S92 [ TCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATAAAAACCGAGTTGCTGGATAATGCCATTCGCCGACGATCGG ] [+] EMBL BM580986 [ ccgGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTAGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTG ] [+] EMBL CNS08RKF [ aaGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGCGGGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATT TATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGAT ] [+] EMBL BX623001 [ CCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTGAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGA ] [+] EMBL BM628471 [ ccGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGACGGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTT GGCACTGATAACCGAACTGCCGCTAATGAAAAAAAatc ] [+] EMBL BX625542 [ GCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTT GGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCT ] [-] EMBL CNS08RKG [ TACCCATTGCTGAGCGCAGCTT GGCACTGATAACCGAACTGCCGCTGAT TTAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTGGTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACCGCGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGACAATCTCATTGAAAACAAATTAA ] [-] EMBL CNS08OM4 [ tGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTGGTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACC TGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGACAATCTCATTGAAAACAAAAAAAAAAAAAAAAAAA] consensusID : consensus_9165#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1220 fasta sequence [AGTCTGTGCTCTGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCAGCTTGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGACTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGCGGTATGTGCCTCCGTTCGGCACGATATATTGCCACATACCTCACGCGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAAGACAATCTCATTGAAAACAAATTCGAACAGTCATCGTTACTTAATTCTTTGTTATTTGTGTATATCGTTATTGAAATAAAAGTGT] [+] EMBL BX607641 [AGTCTGTGCTCTGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCAGCTTGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCG ] [-] EMBL CNS08NX1 [ CCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTTTTTTGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGACTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGCGGTATGTGCCTCCGTTCGGCACGATATATTGCCACATACCTCACGCGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAAGACAATCTCATTGAAAACAAATTCGAACAGTCATCGTTACTTAATTCTTTGTTATTTGTGTATATCGTTATTGAAATAAAAGTGT] consensusID : consensus_9165#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 706 fasta sequence [TAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTTGGC] [+] EMBL BX603588 [TAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTTGGC] consensusID : consensus_9165#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 281 fasta sequence [CGAGGCAACGAATCGGCACGNAGGCGGCACGAGGTTAGGCGGTGCTGCTTAACGGTAATGCTGGCCTATTTGGCGTATCGGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTATCGTATGGTGAGCATCATCTTTCGCCATGGGTGATCGTTCACCCACGTGAATTCTATACCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGGAATTGGGGTGCTCATCTCTGAGAAAGGAGTCTCAGGAAAATGTATCAACTAGGCAAAGCATGGGTGAN] [+] EMBL BX469862 [CGAGGCAACGAATCGGCACGNAGGCGGCACGAGGTTAGGCGGTGCTGCTTAACGGTAATGCTGGCCTATTTGGCGTATCGGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTATCGTATGGTGAGCATCATCTTTCGCCATGGGTGATCGTTCACCCACGTGAATTCTATACCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGGAATTGGGGTGCTCATCTCTGAGAAAGGAGTCTCAGGAAAATGTATCAACTAGGCAAAGCATGGGTGAN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9165#2 -----------------------------------------------------------T 1 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 ATCAGTCTTGCTCGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTT 60 consensus_9165#1 -AGTCTGTGCTCTGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTT 59 consensus_9165#2 AACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATT 61 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 AACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATT 120 consensus_9165#1 AACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATT 119 consensus_9165#2 GCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCT 121 consensus_9165#3 ---------CGAGGCAACGAATCGGCACGNAGGCGGC-ACGAGGTTAGGCGGTGC-TGCT 49 consensus_9165#0 GCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCT 180 consensus_9165#1 GCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCT 179 ** * **** * **** * *** *********** **** consensus_9165#2 TAACGGTAATGCTGGCCTATTTGGCGTTC--GGGGACAGCACTGATGAATCCGGCCTGCG 179 consensus_9165#3 TAACGGTAATGCTGGCCTATTTGGCGTATCGGGGGACAGCACTGATGAATCCGGCCTGCG 109 consensus_9165#0 TAACGGTAATGCTGGCCTATTTGGCGTTC--GGGGACAGCACTGATGAATCCGGCCTGCG 238 consensus_9165#1 TAACGGTAATGCTGGCCTATTTGGCGTTC--GGGGACAGCACTGATGAATCCGGCCTGCG 237 *************************** ***************************** consensus_9165#2 TACGCT-TCGTATGGTGAGCATCATCTTTCGCCATGG-TGATCGTTCACCCAC-TGAATT 236 consensus_9165#3 TACGCTATCGTATGGTGAGCATCATCTTTCGCCATGGGTGATCGTTCACCCACGTGAATT 169 consensus_9165#0 TACGCT-TCGTATGGTGAGCATCATCTTTCGCCATGG-TGATCGTTCGCCCAC-TGAATT 295 consensus_9165#1 TACGCT-TCGTATGGTGAGCATCATCTTTCGCCATGG-TGATCGTTCGCCCAC-TGAATT 294 ****** ****************************** ********* ***** ****** consensus_9165#2 CTAT-CCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGA---TTGGGTGCTC-TC 291 consensus_9165#3 CTATACCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGGAATTGGGGTGCTCATC 229 consensus_9165#0 CTAT-CCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGA---TTGGGTGCTC-TC 350 consensus_9165#1 CTAT-CCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGA---TTGGGTGCTC-TC 349 **** ***************** ******************** * ******** ** consensus_9165#2 TCTGAGAAAGGA-TCTCAGCAAA-TGTATCAACTAGGCAA------ACTGCTGCGCCCAC 343 consensus_9165#3 TCTGAGAAAGGAGTCTCAGGAAAATGTATCAACTAGGCAA------A-----GCATGGGT 278 consensus_9165#0 TCTGAGAAAGGA-TCTCAGCAAA-TGTATCAACTAGGCAA------ACTGCTGCGCCCAC 402 consensus_9165#1 TCTGAGAAAGGA-TCTCAGCAAA-TGTATCCTCCGAAAGATATAAGAGAATTGTACGAAA 407 ************ ****** *** ****** * * * * consensus_9165#2 GATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATC---- 399 consensus_9165#3 GAN--------------------------------------------------------- 281 consensus_9165#0 GATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCA 462 consensus_9165#1 AGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATAC 467 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 GTAGCTACGCGGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCC 522 consensus_9165#1 TCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGC 527 consensus_9165#2 ---------------------------------------------CTGTAAATGTATTGC 414 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 CGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGC 582 consensus_9165#1 CGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCAGCTTGG 587 consensus_9165#2 CACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAA 474 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 CACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGA 642 consensus_9165#1 CACTGATAACCGAACTGCCGCTGATGAAAAA--AATCAAGGGCGGTGCGATCGTGGCCGA 645 consensus_9165#2 AACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTG 534 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 AACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTG 702 consensus_9165#1 GTTGCTGGATAAT-GCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTT 704 consensus_9165#2 CACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGG 594 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 CGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGG 762 consensus_9165#1 TCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCG 764 consensus_9165#2 AGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGA 654 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 AGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGA 822 consensus_9165#1 ACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCA 824 consensus_9165#2 CGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTTGGC-------- 706 consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 CGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCACTTGGGCACTGATAA 882 consensus_9165#1 TTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGT 884 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 CCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATA 942 consensus_9165#1 ACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAAC 944 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 ATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGG 1002 consensus_9165#1 AGGTGATGGAGACGGTGCGACTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGC 1004 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 GCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGG 1062 consensus_9165#1 TTTGTTTGGGCGGTATGTGCCTCCGTTCGGCACGATATATTGCCACATACCTCACGCGTT 1064 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 GTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATG 1122 consensus_9165#1 ACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAA 1124 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 ACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGA 1182 consensus_9165#1 ATGCCAAAAAAGACAATCTCATTGAAAACAAATTCGAACAGTCATCGTTACTTAATTCTT 1184 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 TAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGA 1242 consensus_9165#1 TGTTATTTGTGTATATCGTTATTGAAATAAAAGTGT------------------------ 1220 consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 CGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTG 1302 consensus_9165#1 ------------------------------------------------------------ consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 GTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACCCGTTACACTTTGATAT 1362 consensus_9165#1 ------------------------------------------------------------ consensus_9165#2 ------------------------------------------------------------ consensus_9165#3 ------------------------------------------------------------ consensus_9165#0 TTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGA 1422 consensus_9165#1 ------------------------------------------------------------ consensus_9165#2 ----------------------------------- consensus_9165#3 ----------------------------------- consensus_9165#0 CAATCTCATTGAAAACAAATTAAAAAAAAAAAAAA 1457 consensus_9165#1 ----------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||