These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9171#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1289 fasta sequence [AATTTACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA-CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCA-CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA-CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG-CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG-GGTTCTAGCGCGAAGCAGA-CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT-GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG-TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAAATAGAATACGTTATAGAGAAATTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTTGACGGTCGGTGCTACCCCACACTCTCGACCGACCCGGTTTACCCCGGGATTCACTGTCTT] [+] EMBL CNS08JIA [AATTTACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAA CATCTGGCGGCGACCGTGAGCCAACGCGCA GACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGACGCTTTGGCTCGAAGGATCGGTACGAGCGCA ] [+] EMBL CNS08VVW [ ccACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACGGCGGCACCGGCCG CGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCA CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG GGTTCTAGCGCGAA CAGACCGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGA CT GCGGCTGGCGGTCAC CATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAA CGACCG TCCCGTTCACCGAGCACGTGTTT ] [+] EMBL CNS08KJK [ TTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCTTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCA CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG GG TCTAGCGCGAAG AGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACTGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGA CTGGCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGA ] [-] EMBL CNS08KJL [ AAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACCACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG CGGTCTAGCGCGAAGCAGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACTGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAG TGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGGGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAA ] [-] EMBL CNS08JIB [ GGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCTTCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGCGGTT TAGCGCGAAGCAGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAG TGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCGCGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAAATAGAATACGTTATAGA ] [-] EMBL CNS08VVX [ cATGGGGAAAGCAACCTGAACGACATCATTACCCGCCGTGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCTTCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGCGGTT TAGCGCGAAGCAGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAG TGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGCTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGGACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTTATTCCCGTAAAATAGAATACGTTtt ] [+] EMBL BM614759 [ CCGCGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAAATAGAATACGTTCTAGAGAAATTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTTGACGGTCGGTGCTACCCCACACTCTCGACCGACCCGGTTTACCCCGGGATTCACTGTCTT] consensusID : consensus_9171#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1147 fasta sequence [GGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCT-GGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAACAAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGGGTTCTAGCGCGAA-CAGACGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAG-TGCGGCTGGCGGTCACG-ATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAANGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCNAAGAACC] [+] EMBL BX620483 [GGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAANGCACAGAANGCGGCGCAAGCATCTGGGCGGCGACCGTGAGCCAACGCG ] [+] EMBL CNS095FO [ GCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCACCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAA GGCAAGAAATCTCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGC AACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAA CATCT GGCGGCGACCGTGAGCCAACGCGCA CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAACAAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGGGTTCTAGCGCGAA CAGACGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAG TGCGGCTGGCGGTCACG ATCCGCC ] [+] EMBL BX627048 [ TGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCT GGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGG ] [+] EMBL BX625758 [ GACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCT GGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGCGGTCTAGCGCGAAGCAGACGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCTGCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAANGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCNAAGAACC] consensusID : consensus_9171#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 598 fasta sequence [AAGATCGCCCGAGGNTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGGCAAGCATCTGGCGGGACCGTGAG] [+] EMBL AL931823 [AAGATCGCCCGAGGNTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGGCAAGCATCTGGCGGGACCGTGAG] consensusID : consensus_9171#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence [AATCCCNAGGTATCACATGTTCATATAGCTCGTGCACTTTGTTTAGATTACATAAGTCACAGAGCATCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGTCGACCCGCGGCGACGCGAGTGAAGGCGATGGCAGAAAAAATCGTCCGCGTCTGAACCGCCTCAACGAGCTGTCGCCATGATTGAACACCGAAACGCGATGCTGAACGCTGGTCAAACAAGGTCGATCTTCCCCGTCCGAAGGGCACACGAAATCGCAGGATAAACAAAGCATCCTCCGACAGCGATTCCGATTCCGACCGCGGAGGAGGAGCGCCCGAAAGATCTCCGCCCAAGCGAGCGCAAAGTTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGGTCTCGAAGCTGTCGGTACAGCGGGACCGG] [+] EMBL AL692939 [AATCCCNAGGTATCACATGTTCATATAGCTCGTGCACTTTGTTTAGATTACATAAGTCACAGAGCATCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGTCGACCCGCGGCGACGCGAGTGAAGGCGATGGCAGAAAAAATCGTCCGCGTCTGAACCGCCTCAACGAGCTGTCGCCATGATTGAACACCGAAACGCGATGCTGAACGCTGGTCAAACAAGGTCGATCTTCCCCGTCCGAAGGGCACACGAAATCGCAGGATAAACAAAGCATCCTCCGACAGCGATTCCGATTCCGACCGCGGAGGAGGAGCGCCCGAAAGATCTCCGCCCAAGCGAGCGCAAAGTTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGGTCTCGAAGCTGTCGGTACAGCGGGACCGG] consensusID : consensus_9171#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence [CCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTACGGTTTATTGATGTTGCTTTATTCACAGTTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTGACGGTCGGTGCTACCCCACACTCTCAACCGACCCGGTTTACCCCGGGATTCACTGTCTTTTTTTCATTTTAACGTACTCTAAAAAAAATATTACCTATTT] [+] EMBL BM576819 [CCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTACGGTTTATTGATGTTGCTTTATTCACAGTTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTGACGGTCGGTGCTACCCCACACTCTCAACCGACCCGGTTTACCCCGGGATTCACTGTCTTTTTTTCATTTTAACGTACTCTAAAAAAAATATTACCTATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9171#2 ----------------------------------------------------AAGATCGC 8 consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 -------------------GGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAG 41 consensus_9171#0 AATTTACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAG 60 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 CCGAGGNTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAG 68 consensus_9171#3 ------AATCCCNAGGTATCAC------ATGTTC-ATATAGCTCGTGCAC-TTTGTTTAG 46 consensus_9171#1 TTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAG 101 consensus_9171#0 TTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAG 120 consensus_9171#4 ----------------------------------------CCGCGGACGCGTGGGTTTTT 20 * ** * * * **** consensus_9171#2 ATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 128 consensus_9171#3 ATTACATAAGTCACAGAGCATC-GAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 105 consensus_9171#1 ATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 161 consensus_9171#0 ATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 180 consensus_9171#4 TTTTTTTTTTTTACGGTTTATT--GATGTTGCTTTATTC--ACAG--TTCTATTGAGCGG 74 ** * * ** * ** ** **** * * * ** ** * * consensus_9171#2 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAGCTCG 185 consensus_9171#3 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAG-TCG 161 consensus_9171#1 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAGCTCG 218 consensus_9171#0 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAGCTCG 237 consensus_9171#4 AAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTG 134 * * *** ***** ** ** *** * ** ***** * * * consensus_9171#2 ACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCG 245 consensus_9171#3 ACCCGCGGC-GACGCGAGTGAAGGCGATGGCAG-AAAAAATCGTCCGCG--TCTGAACCG 217 consensus_9171#1 ACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCG 278 consensus_9171#0 ACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCG 297 consensus_9171#4 TTTTGC--TTGACG--------GTCGGTGCTACCCCACACTC-TCAACCGACCCGGTTTA 183 ** **** * ** ** * * * ** ** * * * consensus_9171#2 CCTCAACGAGCTGCTCGCCATGAT-GAACACCGAAA-GCGA-GCTGAA-GCTGGTCAA-A 300 consensus_9171#3 CCTCAACGAGCTG-TCGCCATGATTGAACACCGAAACGCGATGCTGAACGCTGGTCAA-A 275 consensus_9171#1 CCTCAACGAGCTGCTCGCCATGAT-GAACACCGAAA-GCGA-GCTGAA-GCTGGTCAA-A 333 consensus_9171#0 CCTCAACGAGCTGCTCGCCATGAT-GAACACCGAAA-GCGA-GCTGAA-GCTGCTCGGTA 353 consensus_9171#4 CCCCG--GGATTCACTGTCTTTTT--TTCATTTTAACGTAC-TCTAAA-------AAAAA 231 ** * * * * * * * ** ** * ** ** * consensus_9171#2 -AAGGTCGATCTTCCCCG-TCCGAAGGGCA--AGAAATCGCAGGATAAA-AAAGCATCCT 355 consensus_9171#3 CAAGGTCGATCTTCCCCG-TCCGAAGGGCACACGAAATCGCAGGATAAACAAAGCATCCT 334 consensus_9171#1 -AAGGTCGATCTTCCCCG-TCCGAAGGGCA--AGAAATCGCAGGATAAA-AAAGCATCCT 388 consensus_9171#0 CAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGG 413 consensus_9171#4 TATTACCTATTT------------------------------------------------ 243 * * consensus_9171#2 CCGACAGCGA--TTCCGATTCCGAC-GCGGAGG---AGGAGCGCCCGAAAGATCTC-GCC 408 consensus_9171#3 CCGACAGCGA--TTCCGATTCCGACCGCGGAGG---AGGAGCGCCCGAAAGATCTCCGCC 389 consensus_9171#1 CCGACAGCGA--TTCCGATTCCGAC-GCGGAGG---AGGAGCGCCCGAAAGATCTC-GCC 441 consensus_9171#0 TGGACAGGAAGGCACAGAAGGCGGC-GCAAGCATCTGGCGGCGACCGTGAGCCAAC-GCG 471 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 CAAGCGACGCGCAAAGT-GGCCACCGCGCTCGGG--GGCGACGCGAAGCGCACCGAATCG 465 consensus_9171#3 CAAGCGA-GCGCAAAGTTGGCCACCGCGCTCGGG--GGCGACGCGAAGCGCACCGAATCG 446 consensus_9171#1 CAAGCGACGCGCAAAGT-GGCCACCGCGCTCGGG--GGCGACGCGAAGCGCACCGAATCG 498 consensus_9171#0 CACACGCTG-GTGAAGAAATCGATCGACTCCAAGCGGGCGAACAAAGGCGCACGGAAGAG 530 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 GAA----CTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAA 521 consensus_9171#3 GAA----CTGGTCTCGAAGCTG-TCGGTACAGCGGGACCGG------------------- 482 consensus_9171#1 GAA----CTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAA 554 consensus_9171#0 GGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGGGT 590 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 CCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGG-GCAAGC 580 consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 CCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGC 614 consensus_9171#0 TCTAGCGCGAAGCA--GACGGC-CCACGCCGCACCGGGCGGTCCGGGCAGTGT-GAAGCT 646 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ATCTGGCGG-GACCGTGAG----------------------------------------- 598 consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 ATCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAA 674 consensus_9171#0 GTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGA 706 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 GCGGGCGAACAAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGG 734 consensus_9171#0 CAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCTGCGGCTGGCGGTCACGCATCC 766 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 CTCGAAGGATCGGTACGAGCGCAAGGGTTCTAGCGCGAACAGACGGCCCACGCCGCACCG 794 consensus_9171#0 GCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTT 826 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 GGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAG 854 consensus_9171#0 CCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGTCCCGTTCACCGAGCACGT 886 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 GCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAG 914 consensus_9171#0 GTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTAT 946 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 TGCGGCTGGCGGTCACGATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGA 974 consensus_9171#0 GGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGA 1006 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 GCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGAC 1034 consensus_9171#0 ACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGAT 1066 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 CGTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAANGGTGGTGCCCGCGCAA 1094 consensus_9171#0 CGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAA 1126 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 GGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCNAAGAACC------- 1147 consensus_9171#0 ATAGAATACGTTATAGAGAAATTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACAT 1186 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------------------------ consensus_9171#3 ------------------------------------------------------------ consensus_9171#1 ------------------------------------------------------------ consensus_9171#0 CGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTTGACGGTCGGTGCTACCC 1246 consensus_9171#4 ------------------------------------------------------------ consensus_9171#2 ------------------------------------------- consensus_9171#3 ------------------------------------------- consensus_9171#1 ------------------------------------------- consensus_9171#0 CACACTCTCGACCGACCCGGTTTACCCCGGGATTCACTGTCTT 1289 consensus_9171#4 ------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||