These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9181#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1133 fasta sequence [TTTAAAATGCTTTTTGTTTTATTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGCTGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATATATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGT-ATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC-TTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGC-TTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTTTGCTTCCTTGC] [+] EMBL CNS08ZPR [TTTAAAATGCTTTTTGTTTTATTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGCTGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATATATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGT ATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTATGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTAATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC TTTTTTTGTTACACC ] [+] EMBL CNS08EB9 [ TTTTATTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGCTGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATATATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGT ATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTTATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTCTTTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGC TTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTT ] [-] EMBL CNS08EB8 [ TCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGTGATCGTAGTGG TTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC TTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTTTGCTTC ] [-] EMBL CNS08ZPQ [ GATGTATGGTGAGCTTCATTAGTAAATAGAGGTTTGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAAAACTCACAAGCACGCAGTGATCGTAGTGG TTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAATTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC TTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGC TTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCC TTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTCTTCACACTTGC] consensusID : consensus_9181#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 886 fasta sequence [GAATCCCCCGAGGTTATTTTTTTGTATGCTTTTGTTTTATTACACATTTGCAACGCTACCTCATTAGGACTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG-AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGCGG] [+] EMBL AL697392 [GAATCCCCCGAGGTTATTTTTTTGTATGCTTTTGTTTTATTACACATTTGCAACGCTACCTCATTAGGACTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATG TTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGT ] [-] EMBL BX621788 [ CCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTG ] [-] EMBL BX621444 [ TCCATTTCCATTGTGCCTGTGCCNGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCT ] [-] EMBL BM584991 [ AAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGGGGGGGGGGAGGGAATAATAAAACCAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGCGG] [-] EMBL BX612881 [ GGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATAAATGCTTTGCACACGACGCACACA ] [-] EMBL BX625936 [ AATGGGAAAAATAAAATAGTCATACGGCCGTCNTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCT ] consensusID : consensus_9181#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 606 fasta sequence [CACCATTTTCACCACTAGTGCGCACATTCACCTTCGATTTGTAAGTCTCCTGTTATTGATTCCTAGAGTACACAGTGTGTATGTATAGTTTGTTTGCTCTTTTTGTTTCTTCCTCTACTTCTTTCGTCTAATATATGCTAGCGTGCTAGCGTTCTTCCCCCTTTTCCCTTCTCCCTGCAGCCTTGTGTAAGCTAATATGGCCATCGTATCGTATGCAACAACAGGCAGGACTCATCATTGCGCCCTGTTACGACTAGACTTAAACATAAAACACCCGGGCGGCACACCACCACTGAGCGCGCGAGATGCTACGATTCTTTCCACCATTTCCGTGTTCATCCCTATGTATGTACAACTCATAAGAAGCTAATACTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTGCATGCTTTTAGTTTTATTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCTGGAGTTTCCATTTTACTTGCATTTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCCTTTCCATTGTGCCTGTGCCCACACTCCTCTGACAACATATATCTCTCTCTC] [-] EMBL BX622168 [CACCATTTTCACCACTAGTGCGCACATTCACCTTCGATTTGTAAGTCTCCTGTTATTGATTCCTAGAGTACACAGTGTGTATGTATAGTTTGTTTGCTCTTTTTGTTTCTTCCTCTACTTCTTTCGTCTAATATATGCTAGCGTGCTAGCGTTCTTCCCCCTTTTCCCTTCTCCCTGCAGCCTTGTGTAAGCTAATATGGCCATCGTATCGTATGCAACAACAGGCAGGACTCATCATTGCGCCCTGTTACGACTAGACTTAAACATAAAACACCCGGGCGGCACACCACCACTGAGCGCGCGAGATGCTACGATTCTTTCCACCATTTCCGTGTTCATCCCTATGTATGTACAACTCATAAGAAGCTAATACTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTGCATGCTTTTAGTTTTATTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCTGGAGTTTCCATTTTACTTGCATTTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCCTTTCCATTGTGCCTGTGCCCACACTCCTCTGACAACATATATCTCTCTCTC] consensusID : consensus_9181#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence [AAGCTAATANNTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTTTGTATGCTTTTTGTTTTAGTTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTGTCCANCGTGCCGAATTCTGGC] [-] EMBL BX468528 [AAGCTAATANNTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTTTGTATGCTTTTTGTTTTAGTTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTGTCCANCGTGCCGAATTCTGGC] consensusID : consensus_9181#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence [GTTTTTTCTTCTTNTTNTTGCTTCTCGTCTCTTCTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCTTGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTGCTTCACACTTCCTCGTTGCAATAAAAACTCGTTTTGTTTCAATTAAAAATAACATAATCAAAACAAATCTTTCCACGATACGATATAACTAGATAAGCCTAACATTGGAGCATGAAACATTGGAGCTGATAACGGTTACACACTTCGCCTAAAACACTCGTCCATCGTGCCGATTCTTGCCT] [-] EMBL BX468436 [GTTTTTTCTTCTTNTTNTTGCTTCTCGTCTCTTCTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCTTGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTGCTTCACACTTCCTCGTTGCAATAAAAACTCGTTTTGTTTCAATTAAAAATAACATAATCAAAACAAATCTTTCCACGATACGATATAACTAGATAAGCCTAACATTGGAGCATGAAACATTGGAGCTGATAACGGTTACACACTTCGCCTAAAACACTCGTCCATCGTGCCGATTCTTGCCT] consensusID : consensus_9181#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence [CCGGTTATCAGCTCCAATGTTTCAACTAGCTAGTGTGTTAGGCTTATCTAGTTATATCGTATCGTGAAAAGATTTGTTTTGATTATGTTATTTTTAATTGAAACAAAACGAGTTTTTATCGCAACGCGGAAGTGTGAAGCAAAAAAAAACAAAAAAAAGAAAGAAGCAGAGTTAGGATGCAACGGAACGGAAT] [+] EMBL BM618869 [CCGGTTATCAGCTCCAATGTTTCAACTAGCTAGTGTGTTAGGCTTATCTAGTTATATCGTATCGTGAAAAGATTTGTTTTGATTATGTTATTTTTAATTGAAACAAAACGAGTTTTTATCGCAACGCGGAAGTGTGAAGCAAAAAAAAACAAAAAAAAGAAAGAAGCAGAGTTAGGATGCAACGGAACGGAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9181#1 -------------------GAATCCCCCGAGGTTATTTTTTT--GTATGC---TTTT-GT 35 consensus_9181#3 AAGCTAATANNTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTTTGTATGC---TTTTTGT 57 consensus_9181#0 ----------------------------------------TTTAAAATGC---TTTTTGT 17 consensus_9181#2 ---------------------------CACCATTTTCACCACTAGTGCGCACATTCACCT 33 consensus_9181#4 ------------------------------------------------GTTTTTTCTTCT 12 consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 TTTA-TTACACATTT-GCAACGCTACCTCATTAGGACTT-GTTTAGGAGTTGTGGCTGGC 92 consensus_9181#3 TTTAGTTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGC 117 consensus_9181#0 TTTA-TTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGC 76 consensus_9181#2 TCGATTTGTAAGTCTCCTGTTATTGATTCCTAGAGTACACAGTGTGTATGTATAGTTTGT 93 consensus_9181#4 TNTTNTTGCTTCTCGTCTCTTCTTGTTACATCTA-TATATGCTTTGCACACGACGCACAC 71 consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 TGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACT 152 consensus_9181#3 TGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACT 177 consensus_9181#0 TGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACT 136 consensus_9181#2 TTGCT--CTTTTTGTTTCTTCCTCTACTTCTTTCGTC-TAATATA---TGCTAGCGTGCT 147 consensus_9181#4 ATTCTAACACATTCATTC-GCTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCA 130 consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 TTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATA 212 consensus_9181#3 TTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATA 237 consensus_9181#0 TTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATA 196 consensus_9181#2 AGCGTTCTTCCCCCTTTTCCCTTCTCCCTGCAGC----CTTGTGTAAGCTA------ATA 197 consensus_9181#4 TCTTTGTTTTTGTATGTTTTCTTTTTCTTGCTTT-GTTCTCGATTATGTTCCTAT---CA 186 consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 TATCTCTCTCTCT------------GCATGTTTGTATGGTGTATGATGTATGGT-GAGCT 259 consensus_9181#3 TATCTCTCTCTCT------------GCATGTTTGTATGGTGTATGATGTATGGT-GAGCT 284 consensus_9181#0 TATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGT-GAGCT 255 consensus_9181#2 TGGCCATCGTATC------------GTATGCAACAACAG-GCAGGACTCATCATTGCGCC 244 consensus_9181#4 TACCTAGTATTTCAC----------GTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTT 236 consensus_9181#5 -----------------------------------------------------CCGGTTA 7 consensus_9181#1 TCATTAGTAAA-TAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTAC 318 consensus_9181#3 TCATTAGTAAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTAC 344 consensus_9181#0 TCATTAGTAAA-TAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTAC 314 consensus_9181#2 CTGTTAC--GACTAGACTTAAACATAAAACACCCGGGCGGCACACCACCACTGAGCGCGC 302 consensus_9181#4 TCTCTTGTCGTGTTTTTACACCTTGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGT 296 consensus_9181#5 TCAGCTCCAATGTTTCAACTAGCTAGTGTGTTAGGCTTATCTAGTTATATCGTATCGTGA 67 * * consensus_9181#1 ACTAC-CTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCAC-TAACTGGGAA 376 consensus_9181#3 ACTAC-CTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCAC-TAACTGGGAA 402 consensus_9181#0 ACTAC-CTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCAC-TAACTGGGAA 372 consensus_9181#2 GAGATGCTACGATTCTTTCCACCATTTCCGTGTTCATCCCTATGTATGTACAACTCATAA 362 consensus_9181#4 TCTA----ACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTGCTTCACAC-TTCCTCGTTG 351 consensus_9181#5 A-------AAGATTTGTTTTGATTATGTTATTTTTAATTGAAACAAAAC--GAGTTTTTA 118 * * ** * consensus_9181#1 AAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGT--GTGTGTGTATATATGAGC 434 consensus_9181#3 AAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGT--GTGTGTGTATATATGAGC 460 consensus_9181#0 AAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGT--GTGTGTGTATATATGAGC 430 consensus_9181#2 GAAGCTAATACTCTTTCGTATGTGTGTGAGTGTTGTTTTT--TTGCATGCTTTTA-GTTT 419 consensus_9181#4 CAATAAAAACTCGTTTTGTTTCAATTAAAAATAACATAATCAAAACAAATCTTTCCACGA 411 consensus_9181#5 TCGCAACGCGGAAGTGTGAAGCAAAAAAAAACAAAAAAAA-GAAAGAAGCAGAGTTAGGA 177 * * consensus_9181#1 TATTAT-CATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACC 493 consensus_9181#3 TATTAT-CATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACC 519 consensus_9181#0 TATTAT-CATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACC 489 consensus_9181#2 TATTACACATTTTGCAACGCTACCTCATTAGGACTT-----TGTTTAGGAGTTGTG-GCT 473 consensus_9181#4 TACGATATAACTAGATAAGCCTAA-CATTGGAGCATGAAACATTGGAGCTGATAACGGTT 470 consensus_9181#5 TGCAACGGAACGGAAT-------------------------------------------- 193 * * * consensus_9181#1 GGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAG 553 consensus_9181#3 GGATGGTT-GTCCANCGTGCCGAATTC--TGGC--------------------------- 549 consensus_9181#0 GGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAG 549 consensus_9181#2 GGCTGGCT-GGCTGGAGTTTCCATTTTACTTGCATTTTCCTCATCGTAGTAC---AATCT 529 consensus_9181#4 ACACACTTCGCCTAAAACACTCGTCCATCGTGCCGATTCTTGCCT--------------- 515 consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 AACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGA--- 610 consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 AACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGTA 609 consensus_9181#2 CTTAGTTTACTTTCCATCTTTTTCCCTTTCCATTGTGCCTGTGCCCACACTCCTCTGACA 589 consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 TCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTG 670 consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 TCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTG 669 consensus_9181#2 ACATA-TATCTCTCTCTC------------------------------------------ 606 consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 GGGCGGAGTAAGTTTGGTGGGGGTGGGG-------GGGGAGGGAATAATAAAACAAACGT 723 consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 GGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGT 729 consensus_9181#2 ------------------------------------------------------------ consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 TTAAACAATGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACA 783 consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 TTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACA 789 consensus_9181#2 ------------------------------------------------------------ consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 CATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTGCA 843 consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 CACGTCGCTCTTTGTCGCGTTTTT--CCTCTTTTTTTGTTACACCTATATATGCTTTGCA 847 consensus_9181#2 ------------------------------------------------------------ consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 CACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGCGG----------------- 886 consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 CACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGTTCTCTTCTTACTATGACAC 907 consensus_9181#2 ------------------------------------------------------------ consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 ------------------------------------------------------------ consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 TAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGT 967 consensus_9181#2 ------------------------------------------------------------ consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 ------------------------------------------------------------ consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 TCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTC 1027 consensus_9181#2 ------------------------------------------------------------ consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 ------------------------------------------------------------ consensus_9181#3 ------------------------------------------------------------ consensus_9181#0 TCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTC 1087 consensus_9181#2 ------------------------------------------------------------ consensus_9181#4 ------------------------------------------------------------ consensus_9181#5 ------------------------------------------------------------ consensus_9181#1 ---------------------------------------------- consensus_9181#3 ---------------------------------------------- consensus_9181#0 TAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTTTGCTTCCTTGC 1133 consensus_9181#2 ---------------------------------------------- consensus_9181#4 ---------------------------------------------- consensus_9181#5 ---------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||