These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9199#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1158 fasta sequence [CCGCCCACGCGTCCGGAAAACTCCGATCGGTGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAGCGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT---GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGACTATGCGGAGGCGACTTCAA] [+] EMBL BM585991 [CCGCCCACGCGTCCGGAAAACTCCGATCTGTGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAGCGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTATAGAAATAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTT ] [+] EMBL BM584640 [ cCGGTGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAGCGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGT ] [+] EMBL BM634981 [ ccgGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAACGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAGGGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTG TATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATT ] [+] EMBL AGA283025 [ cggcacgaAGGCTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGT ] [+] EMBL BM602793 [ ccg GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTATAGAAATAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAAACGGGGTGGATACGGCGATTCGAAa ] [+] EMBL BM596573 [ ccgGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATT TAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAAATTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGTTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAA ] [-] EMBL AGA281412 [ GTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGACTATGCGGAGGCGACTTCAA] consensusID : consensus_9199#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 671 fasta sequence [CCGGGTTTTCAGGCTTCGGCAGTCGTAGTACCGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACAAAGCATTGCTTGTCTTGCACATTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGTG---CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT---GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAAACTGTTTCGGTAAACG] [+] EMBL BM631485 [CCGGGTTTTCAGGCTTCGGCAGTCGTAGTAGAGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTTTCAGGACAAAGCATTGCTTGTCTTGCACATTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGT ] [+] EMBL BM579699 [ CCGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACTAAGCATTGCTTGTCTTGCACATTTGTTACAA GAGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTG TATGTATGCATGTGTGTGTGTGAC CCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGT ] [+] EMBL BM611835 [ CCGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACAAAGCATTGCTTGTCTTGCACACTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTATAGAAATAGCACAGCTTTAAAGGACAACGCTTGATT ] [+] EMBL BM625438 [ CAGGACAAAGCATTGCTTGTCTTGCACATTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATTTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTTAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAAACTGTTTCGGTAAACG] consensusID : consensus_9199#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence [CCGCCCACGCGTCCGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGGACTATCGCGGAGGCGACTTCAACAGGCGTAGCGGGAGGCGGCGGTGGAGGCCGCTATCAGAACGATCGGCGCGGCGGCGACTACGGCAACTATGGGCCGCGGCGGTGGCGACCGGGGCTACCAACAATGGCGGTGGCTTCCAGCGCGGCGGGGGACGGCGGGGGCTATCAGAATTCTGAAGGT] [+] EMBL BM576834 [CCGCCCACGCGTCCGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGGACTATCGCGGAGGCGACTTCAACAGGCGTAGCGGGAGGCGGCGGTGGAGGCCGCTATCAGAACGATCGGCGCGGCGGCGACTACGGCAACTATGGGCCGCGGCGGTGGCGACCGGGGCTACCAACAATGGCGGTGGCTTCCAGCGCGGCGGGGGACGGCGGGGGCTATCAGAATTCTGAAGGT] consensusID : consensus_9199#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence [CCGGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAACGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGTGTATAGGAAACTAGGGCGTTCGGTACAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCT] [+] EMBL BM610475 [CCGGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAACGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGTGTATAGGAAACTAGGGCGTTCGGTACAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCT] consensusID : consensus_9199#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence [CCGCGGACGCGTGGGCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACTAAGCATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGGTATATTTAGTTAAAAAAAAATGTGTTACCAAAAGTTGTGAAATAGATAAGCGGTCGACAAGCTCTAGAACACAAAAGTCCCGTGAACTGCTGGAGGATGATGACCCCGTTTTCTCATGAATGGAGTGTGCAATACGTAGAAGAAGATTGTACATGACGCGCTCCTCTCCTCTGTTGCGTTAATTTCCCAAGCAGCAGCATTCAACATCCCACCCTCCCCGTCGAGTGACAAAGAGCGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGT] [+] EMBL BM629327 [CCGCGGACGCGTGGGCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACTAAGCATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGGTATATTTAGTTAAAAAAAAATGTGTTACCAAAAGTTGTGAAATAGATAAGCGGTCGACAAGCTCTAGAACACAAAAGTCCCGTGAACTGCTGGAGGATGATGACCCCGTTTTCTCATGAATGGAGTGTGCAATACGTAGAAGAAGATTGTACATGACGCGCTCCTCTCCTCTGTTGCGTTAATTTCCCAAGCAGCAGCATTCAACATCCCACCCTCCCCGTCGAGTGACAAAGAGCGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGT] consensusID : consensus_9199#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 500 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGGTTTTCAGGACAAAGTATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATT] [+] EMBL BM622216 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGGTTTTCAGGACAAAGTATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9199#1 ----------------CCGGGTTTTCAGGCTT-CGGCAGTCGTAGTACCGCGGTA-CGCC 42 consensus_9199#5 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTC-CGGTA-CGCC 58 consensus_9199#3 -----------------------------------CCGGGAAAAGAACGTCGGTAACGTC 25 consensus_9199#4 -------------------------------------------------------CCGCG 5 consensus_9199#0 -------CCGCCCACGCGTCCGGAAAACTCCGATCGGTGGAAAAGAACGTCGGTAACGTC 53 consensus_9199#2 ------------CCGCCCACGCGTCCGGGCGTTCGGTAAAACTGTTTCGGTAAAA-CGGT 47 ** consensus_9199#1 G-CGTTTGACCGTTATTTT--GCGGAGATTTTTGCCA-----GTTTTAGGAGAAGTTTCT 94 consensus_9199#5 G-CGTTTGACCGTTATTTT--GCGGAGATTTTTGCCA-----GTTTTAGGAGAAGGTTTT 110 consensus_9199#3 G-TGTCCGTTTTGTATGA---ACGAAAACTTACGCTA-----AATT---GTGCAAACCCT 73 consensus_9199#4 GACGCGTGGGCGTTATTTT--GCGGAGATTTTTGCCA-----GTTTTAGGAGAAGTTTCT 58 consensus_9199#0 G-TGTCCGTTTTGTATGA---GCGAAAACTTACGCTA-----AATT---GTGCAAACCCT 101 consensus_9199#2 ACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCT 107 * * * * ** * ** * * consensus_9199#1 ----CAGGACAAA-GCATTGCTTGT-CTTGCACATTTGTTA-CAAGCGTTTGCGTTTATT 147 consensus_9199#5 ----CAGGACAAA-GTATTGCTTGT-CTTGCACATTTGTTA-CAAGAGTTT------ATT 157 consensus_9199#3 ----CAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTG-GCTACGGTT-------TT 121 consensus_9199#4 ----CAGGACTAA-GCATTGCTTGT-CTTGCACATTTGTTA-CAAGAGTTT------ATT 105 consensus_9199#0 ----CAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTT 157 consensus_9199#2 ACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATT 167 * * * * * * * * ** consensus_9199#1 ---------------------GGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 186 consensus_9199#5 ---------------------GGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 196 consensus_9199#3 ---------------------G-----CGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 155 consensus_9199#4 ---------------------G-------GAAAGGTA------TATTTAGTTAAAAAAAA 131 consensus_9199#0 TGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 217 consensus_9199#2 AACCA----------------AAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGA 211 * * ** * * consensus_9199#1 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 245 consensus_9199#5 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 255 consensus_9199#3 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 214 consensus_9199#4 ATGTGTTACCAA-AAGTTGTGAAATAGATAAGCG-GTCGACA-AGCTCTAGAACACAAAA 188 consensus_9199#0 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 276 consensus_9199#2 CTTGCAGCAGAAGCAGCAGC-AACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAA 270 ** ** * * * * * consensus_9199#1 GTGTGTGCGCGCGCGTGTATATGTAT--GCAAGTGTGTGTGTGCCTGTCTG-GTG-GTGC 301 consensus_9199#5 GTGTGTGCGCGCGCGTGTATATGTAT--GCAAGTGTGTGTG--CCTGTCTG-GTG-GTGC 309 consensus_9199#3 GTGTGTGCGCGCGCGTGTATGTATGC--ATGTGTGTGTGTGACCCTGTCTG-GTG-GTAC 270 consensus_9199#4 GTCC---CGTGAACTGCTGGAGGATG--ATGACCCCGTTTTCTCATGAATG-GAGTGTGC 242 consensus_9199#0 GTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCTGTCTG-GTG-GTGC 334 consensus_9199#2 ATCC-----TAAGCATCCGGCCGGGC-----GGTACGTACCACCGCAATTGCGAGAATGT 320 * * ** * ** * * * consensus_9199#1 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 359 consensus_9199#5 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 367 consensus_9199#3 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 328 consensus_9199#4 AATACGTAGAAGAAGATTGTACATGACGCGCTCCTCTCCTCTGTTGCGTTAATTTCCCAA 302 consensus_9199#0 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 392 consensus_9199#2 GCT--GATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAA 378 * * * ** * * *** * * consensus_9199#1 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 415 consensus_9199#5 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 423 consensus_9199#3 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 384 consensus_9199#4 GCAGCAGCA-TTCA-ACATCCCACCCTCCCCGTCGAGTG-ACAAAGAGCGCGGAA--AGC 357 consensus_9199#0 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 448 consensus_9199#2 GCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGA 438 * * * * * * *** * consensus_9199#1 GTCG---GGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCA-CAGC 471 consensus_9199#5 GTCG---GGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCA-CAGC 479 consensus_9199#3 GTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTA-CAGC 443 consensus_9199#4 TTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGC 417 consensus_9199#0 GTCG---GGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCA-CAGC 504 consensus_9199#2 ATCG---TGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGGACTATCGCGGAGGCGAC 495 * * ** * * * * * consensus_9199#1 TTTAAAGGACAACGCTTGATTAAAAAAAAAAACA-GTTTGTGAACATTTTTGAACTATAA 530 consensus_9199#5 TTTAAAGGACAACGCTTGATT--------------------------------------- 500 consensus_9199#3 TTTAAAGGACAACGCTTGATTAAAAAAAAAAACA-GTTTGTGAACATTTTTGAACTATAA 502 consensus_9199#4 ATCCGTTTGTTCCCCCT--TTCAACTGTGTGTGC-GCGCGCGTGTATGTATGCATGTGTG 474 consensus_9199#0 TTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAA 564 consensus_9199#2 TTCAACAGGCGTAGCGGGAGGCGGCGGTGGAGGCCGCTATCAGAACGATCGGCGCGGCGG 555 * * consensus_9199#1 AA-TTGCAGTGAATTTGG--TGGCGAGATATCAAACAGAACAGTACGTAATTACTCTT-C 586 consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 AA-TTGCAGTGAATTTGG--TGGCGAGATATCAAACAGAACAGTACGTAATTACTCTT-C 558 consensus_9199#4 TG-TGTGACCCTGTCTGG--TGGTACATTCGAAATCAAAGATACCCGTGAC-ACGACG-C 529 consensus_9199#0 AA-TTGCAGTGAATTTGG--TGGCGAGATATCAAACAGAACAGTACGTAATTACTCTT-C 620 consensus_9199#2 CGACTACGGCAACTATGGGCCGCGGCGGTGGCGACCGGGGCTACCAACAATGGCGGTGGC 615 consensus_9199#1 CCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGT 646 consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 CCAAGGTGTGCATCGCCGTAAGTGTGTGTG----------TGTATAGGAAACTAGGGCGT 608 consensus_9199#4 TTCGAGTGTATACGTGTGTT-GTGT----------------------------------- 553 consensus_9199#0 CCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGT 680 consensus_9199#2 TTCCAGCGCG-GCGGGGGACGGCGGGGGCTATCAGAATTCTGAAGGT------------- 661 consensus_9199#1 TCGGTAAAAACTGTTTCGGTAAACG----------------------------------- 671 consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 TCGGTACAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCT---------------- 652 consensus_9199#4 ------------------------------------------------------------ consensus_9199#0 TCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTT 740 consensus_9199#2 ------------------------------------------------------------ consensus_9199#1 ------------------------------------------------------------ consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 ------------------------------------------------------------ consensus_9199#4 ------------------------------------------------------------ consensus_9199#0 CTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAAC 800 consensus_9199#2 ------------------------------------------------------------ consensus_9199#1 ------------------------------------------------------------ consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 ------------------------------------------------------------ consensus_9199#4 ------------------------------------------------------------ consensus_9199#0 GCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTT 860 consensus_9199#2 ------------------------------------------------------------ consensus_9199#1 ------------------------------------------------------------ consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 ------------------------------------------------------------ consensus_9199#4 ------------------------------------------------------------ consensus_9199#0 GCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCA 920 consensus_9199#2 ------------------------------------------------------------ consensus_9199#1 ------------------------------------------------------------ consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 ------------------------------------------------------------ consensus_9199#4 ------------------------------------------------------------ consensus_9199#0 GAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGT 980 consensus_9199#2 ------------------------------------------------------------ consensus_9199#1 ------------------------------------------------------------ consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 ------------------------------------------------------------ consensus_9199#4 ------------------------------------------------------------ consensus_9199#0 GCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGC 1040 consensus_9199#2 ------------------------------------------------------------ consensus_9199#1 ------------------------------------------------------------ consensus_9199#5 ------------------------------------------------------------ consensus_9199#3 ------------------------------------------------------------ consensus_9199#4 ------------------------------------------------------------ consensus_9199#0 GGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAAT 1100 consensus_9199#2 ------------------------------------------------------------ consensus_9199#1 ---------------------------------------------------------- consensus_9199#5 ---------------------------------------------------------- consensus_9199#3 ---------------------------------------------------------- consensus_9199#4 ---------------------------------------------------------- consensus_9199#0 CGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGACTATGCGGAGGCGACTTCAA 1158 consensus_9199#2 ---------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||